# terms

id: PBO:0059541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-His (CAU/C)","termid":"PBO:0059541"}


id: GO:0006270
data:
  {"annotated_genes":["SJAG_00696","SJAG_02098","SJAG_01823","SJAG_02908","SJAG_05239","SJAG_03927","SJAG_03160","SJAG_04995","SJAG_02172","SJAG_00857","SJAG_02394","SJAG_01354","SJAG_04879","SJAG_00536","SJAG_03048","SJAG_01624","SJAG_02667","SJAG_02074","SJAG_00311","SJAG_02800","SJAG_05301","SJAG_02162","SJAG_03695","SJAG_03720","SJAG_04994","SJAG_03451","SJAG_02607","SJAG_00884","SJAG_01267","SJAG_01762","SJAG_00364","SJAG_04210","SJAG_00874","SJAG_00399","SJAG_04341","SJAG_02627","SJAG_00327","SJAG_01210","SJAG_04671","SJAG_03438","SJAG_04623","SJAG_02348"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105993,109627,111472,103399],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140529"},{"annotations":[99382],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140530"},{"annotations":[103300,107446,90609,93494,99019,103890,104103,111345,106275,111173,101376,109630,95482,109546,102471,113409,103402,95475,108498,107964,106615,90001,109241,88008,107704,108094,111476,89037,86500,93392,109220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902975"},{"annotations":[93833,85429,98431,104943],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903467"},{"annotations":[99020,93495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902315"},{"annotations":[113348,108097,99385],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903468"},{"annotations":[112307,85125,98437,102663],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1904514"},{"annotations":[95419],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903466"}]},"cv_name":"biological_process","definition":"The process in which DNA-dependent DNA replication is started; it begins when specific sequences, known as origins of replication, are recognized and bound by the origin recognition complex, followed by DNA unwinding.","definition_xrefs":["PMID:28209641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"DNA-templated DNA replication","termid":"GO:0006261"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00311":null,"SJAG_00327":null,"SJAG_00364":null,"SJAG_00399":null,"SJAG_00536":null,"SJAG_00696":null,"SJAG_00857":null,"SJAG_00874":null,"SJAG_00884":null,"SJAG_01210":null,"SJAG_01267":null,"SJAG_01354":null,"SJAG_01624":null,"SJAG_01762":null,"SJAG_01823":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02162":null,"SJAG_02172":null,"SJAG_02348":null,"SJAG_02394":null,"SJAG_02607":null,"SJAG_02627":null,"SJAG_02667":null,"SJAG_02800":null,"SJAG_02908":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03438":null,"SJAG_03451":null,"SJAG_03695":null,"SJAG_03720":null,"SJAG_03927":null,"SJAG_04210":null,"SJAG_04341":null,"SJAG_04623":null,"SJAG_04671":null,"SJAG_04879":null,"SJAG_04994":null,"SJAG_04995":null,"SJAG_05239":null,"SJAG_05301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"DNA replication initiation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0042024"],"synonyms":[{"name":"DNA endoreduplication initiation","type":"narrow"},{"name":"DNA re-replication initiation","type":"narrow"},{"name":"DNA-dependent DNA replication initiation","type":"exact"}],"termid":"GO:0006270","terms_by_termid":{"GO:0140529":null,"GO:0140530":null,"GO:1902315":null,"GO:1902975":null,"GO:1903466":null,"GO:1903467":null,"GO:1903468":null,"GO:1904514":null}}


id: GO:1900541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fumonisin.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"fumonisin metabolic process","termid":"GO:1900539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"fumonisin biosynthetic process","synonyms":[{"name":"fumonisin anabolism","type":"exact"},{"name":"fumonisin biosynthesis","type":"exact"},{"name":"fumonisin formation","type":"exact"},{"name":"fumonisin synthesis","type":"exact"}],"termid":"GO:1900541"}


id: PBO:0013830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-T, Gpi16 (predicted)","termid":"PBO:0013830"}


id: PR:000049982
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair protein rad9 (Schizosaccharomyces pombe) that has been phosphorylated on residues equivalent to Thr-412 and Ser-423 of the amino acid sequence represented by UniProtKB:P26306. Example: UniProtKB:P26306, Thr-412/Ser-423, MOD:00046.","definition_xrefs":["PRO:CNA","PomBase:MAH","PMID:21561865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair protein rad9 (Schizosaccharomyces pombe)","termid":"PR:000044575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rad9/Phos(T412,S423)","pombase_gene_id":"SPAC664.07c","synonyms":[{"name":"PomBase_original_PRO_term_name: DNA repair protein rad9 phosphorylated 3 (Schizosaccharomyces pombe)","type":"exact"},{"name":"rad9/Phos(T412,S423)","type":"exact"}],"termid":"PR:000049982"}


id: PBO:0064721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 57","termid":"PBO:0064721"}


id: PBO:0041205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Burkitt lymphoma variant rearranging region 1","termid":"PBO:0041205"}


id: PBO:0043265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 24","termid":"PBO:0043265"}


id: FYPO:0000895
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An abnormal intracellular mitochondrion distribution phenotype observed in the vegetative growth phase of the life cycle in which mitochondria cluster together more than normal with a cluster distal to one or both sides of the nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial morphology","termid":"FYPO:0000359"},{"relation_name":"is_a","term_name":"abnormal intracellular mitochondrion distribution","termid":"FYPO:0000894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"mitochondrial aggregation","secondary_identifiers":["FYPO:0000896"],"synonyms":[{"name":"aggregated mitochondria","type":"exact"},{"name":"mitochondrial aggregation at cell end","type":"related"},{"name":"mitochondrial aggregation at cell tip","type":"related"},{"name":"mitochondrial aggregation during mitotic cell cycle","type":"related"},{"name":"mitochondrial aggregation during vegetative growth","type":"exact"}],"termid":"FYPO:0000895"}


id: PR:O74424
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nup211 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup211 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC162.08c","synonyms":[{"name":"Spom972h-nup211","type":"exact"},{"name":"nuclear pore protein nup211 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74424"}


id: GO:0044317
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized neuron projection which is the site of synaptic transmission produced by retinal rod cells. Rod spherules are small round enlargements of the axon (3-5 micrometers diameter) or even extensions of the cell body.","definition_xrefs":["PMID:26930660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"rod spherule","synonyms":[{"name":"rod cell spherule","type":"exact"},{"name":"rod photoreceptor spherule","type":"exact"}],"termid":"GO:0044317"}


id: PBO:0029189
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-enlarged_exocytic_vesicles","termid":"PBO:0029189"}


id: PBO:0027816
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_on_uracil_nitrogen_source","termid":"PBO:0027816"}


id: PBO:0044057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin C","termid":"PBO:0044057"}


id: PBO:0002515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Sfp1 (predicted)","termid":"PBO:0002515"}


id: GO:0034776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a histamine stimulus. Histamine, the biogenic amine 2-(1H-imidazol-4-yl)ethanamine, is involved in local immune responses as well as regulating physiological function in the gut and acting as a neurotransmitter.","definition_xrefs":["GOC:mah","GOC:vk","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to histamine","synonyms":[{"name":"response to histamine stimulus","type":"exact"}],"termid":"GO:0034776"}


id: PBO:0047617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGF1 intracellular binding protein","termid":"PBO:0047617"}


id: PBO:0079957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP7 antisense RNA 1","termid":"PBO:0079957"}


id: GO:0071009
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spliceosomal snRNP complex that is formed by the association of the U4atac/U6atac and U5 snRNPs.","definition_xrefs":["GOC:krc","GOC:mah","PMID:16201866","GOC:pr","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal tri-snRNP complex","termid":"GO:0097526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"U4atac/U6atac x U5 tri-snRNP complex","synonyms":[{"name":"U4atac/U6atac.U5 snRNP complex","type":"exact"}],"termid":"GO:0071009"}


id: FYPO:0000871
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000458"},{"relation_name":"is_a","term_name":"increased histone methylation during vegetative growth","termid":"FYPO:0000869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H3-K9 methylation during vegetative growth","synonyms":[{"name":"increased histone H3 K9 methylation during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 methylation during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9me during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000871"}


id: GO:0046573
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of lactone rings (intramolecular cyclic esters) to produce a hydroxyl group and a carboxyl group.","definition_xrefs":["PMID:11640988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"lactonohydrolase activity","termid":"GO:0046573"}


id: GO:0097437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dormancy process that results in an organism remaining in dormancy. Dormancy (sometimes called a dormant state) is a suspension of most physiological activity and growth that can be reactivated.","definition_xrefs":["PO_REF:00009","GOC:PO_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of dormancy","termid":"GO:0097437"}


id: PBO:0067220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 288, pseudogene","termid":"PBO:0067220"}


id: PBO:0050505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox C4","termid":"PBO:0050505"}


id: PBO:0017982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"topoisomerase II-associated deadenylation-dependent mRNA-decapping factor Pdc2 (predicted)","termid":"PBO:0017982"}


id: PBO:0061048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPA like domain containing 3","termid":"PBO:0061048"}


id: GO:0031152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the aggregate over time, from its formation to the point when a slug is formed. Aggregate development begins in response to starvation and continues by the chemoattractant-mediated movement of cells toward each other. The aggregate is a multicellular structure that gives rise to the slug.","definition_xrefs":["GOC:mtg_sensu","ISBN:0521583640","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"},{"relation_name":"is_a","term_name":"socially cooperative development","termid":"GO:0099120"},{"relation_name":"part_of","term_name":"sorocarp development","termid":"GO:0030587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aggregation involved in sorocarp development","synonyms":[{"name":"aggregate development involved in sorocarp development","type":"exact"},{"name":"aggregation during fruiting body development","type":"exact"}],"termid":"GO:0031152"}


id: PBO:0060358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myocilin opposite strand","termid":"PBO:0060358"}


id: PBO:0061311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPHP3-ACAD11 readthrough (NMD candidate)","termid":"PBO:0061311"}


id: PBO:0004267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase Ubp9","termid":"PBO:0004267"}


id: PBO:0043252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLDN10 antisense RNA 1","termid":"PBO:0043252"}


id: PBO:0061464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 0 group B member 2","termid":"PBO:0061464"}


id: GO:0046240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of xylene, a mixture of three colorless, aromatic hydrocarbon liquids, ortho-, meta- and para-xylene.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete xylene biosynthetic process (obsolete GO:0046240)","synonyms":[{"name":"xylene anabolism","type":"exact"},{"name":"xylene biosynthesis","type":"exact"},{"name":"xylene biosynthetic process","type":"exact"},{"name":"xylene formation","type":"exact"},{"name":"xylene synthesis","type":"exact"}],"termid":"GO:0046240"}


id: PBO:0049599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 2","termid":"PBO:0049599"}


id: PBO:0114138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenine deaminase Dea3","termid":"PBO:0114138"}


id: GO:0043397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of corticotropin-releasing hormone secretion.","definition_xrefs":["GOC:go_curators","PMID:11027914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptide hormone secretion","termid":"GO:0090276"},{"relation_name":"regulates","term_name":"corticotropin-releasing hormone secretion","termid":"GO:0043396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of corticotropin-releasing hormone secretion","synonyms":[{"name":"regulation of CRF secretion","type":"exact"},{"name":"regulation of CRH secretion","type":"exact"},{"name":"regulation of corticotropin-releasing factor secretion","type":"exact"}],"termid":"GO:0043397"}


id: PBO:0004981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein (predicted), DUF2429 family","termid":"PBO:0004981"}


id: GO:0019521
data:
  {"annotated_genes":["SJAG_00633","SJAG_03852"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94249,107637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046177"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-gluconate, the anion of D-gluconic acid, the aldonic acid derived from glucose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldonic acid metabolic process","termid":"GO:0019520"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00633":null,"SJAG_03852":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"D-gluconate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"D-gluconate metabolism","type":"exact"}],"termid":"GO:0019521","terms_by_termid":{"GO:0046177":null}}


id: GO:0000256
data:
  {"annotated_genes":["SJAG_00035","SJAG_05287"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87823,88506],"is_not":false,"summary":null,"term":"GO:0000256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of allantoin, (2,5-dioxo-4-imidazolidinyl)urea.","definition_xrefs":["ISBN:0198547684","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allantoin metabolic process","termid":"GO:0000255"},{"relation_name":"is_a","term_name":"amide catabolic process","termid":"GO:0043605"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00035":null,"SJAG_05287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"allantoin catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"allantoin breakdown","type":"exact"},{"name":"allantoin catabolism","type":"exact"},{"name":"allantoin degradation","type":"exact"}],"termid":"GO:0000256","terms_by_termid":{"GO:0000256":null}}


id: GO:0050427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3'-phosphoadenosine 5'-phosphosulfate, a naturally occurring mixed anhydride. It is an intermediate in the formation of a variety of sulfo compounds in biological systems.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside bisphosphate metabolic process","termid":"GO:0034035"},{"relation_name":"is_a","term_name":"oxoacid metabolic process","termid":"GO:0043436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"3'-phosphoadenosine 5'-phosphosulfate metabolic process","secondary_identifiers":["MetaCyc:PWY-5340"],"synonyms":[{"name":"3'-phosphoadenosine 5'-phosphosulfate metabolism","type":"exact"},{"name":"3'-phosphoadenosine 5'-phosphosulphate metabolic process","type":"exact"},{"name":"3'-phosphoadenosine 5'-phosphosulphate metabolism","type":"exact"},{"name":"3'-phosphoadenylyl-sulfate metabolic process","type":"exact"},{"name":"3'-phosphoadenylyl-sulfate metabolism","type":"exact"},{"name":"PAPS metabolic process","type":"exact"},{"name":"PAPS metabolism","type":"exact"},{"name":"adenosine 3'-phosphate 5'-phosphosulfate metabolic process","type":"exact"},{"name":"adenosine 3'-phosphate 5'-phosphosulfate metabolism","type":"exact"},{"name":"phosphoadenosine phosphosulfate metabolic process","type":"exact"},{"name":"phosphoadenosine phosphosulfate metabolism","type":"exact"}],"termid":"GO:0050427"}


id: GO:0035492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the synthesis or release of any leukotriene following a stimulus as part of an inflammatory response.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukotriene production involved in inflammatory response","termid":"GO:0035490"},{"relation_name":"is_a","term_name":"negative regulation of inflammatory response","termid":"GO:0050728"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"leukotriene production involved in inflammatory response","termid":"GO:0002540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of leukotriene production involved in inflammatory response","termid":"GO:0035492"}


id: PBO:0003877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L7a/L8 (predicted)","termid":"PBO:0003877"}


id: SO:0000182
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transposon where the mechanism of transposition is via a DNA intermediate.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transposable_element","termid":"SO:0000101"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA_transposon","synonyms":[{"name":"DNA transposon","type":"exact"},{"name":"class II","type":"related"},{"name":"class II transposon","type":"exact"}],"termid":"SO:0000182"}


id: FYPO:0002996
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which regulation of DNA replication during the mitotic cell cycle is normal (i.e. indistinguishable from wild type) during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal negative regulation of DNA replication during cellular response to hydrogen peroxide","synonyms":[{"name":"normal negative regulation of DNA replication during cellular response to H2O2","type":"exact"},{"name":"normal negative regulation of nuclear cell cycle DNA replication during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0002996"}


id: PBO:0065250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 20C","termid":"PBO:0065250"}


id: GO:2001191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gamma-delta T cell activation involved in immune response.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of gamma-delta T cell activation","termid":"GO:0046643"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"gamma-delta T cell activation involved in immune response","termid":"GO:0002290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of gamma-delta T cell activation involved in immune response","synonyms":[{"name":"regulation of gamma-delta T cell activation during immune response","type":"related"},{"name":"regulation of gamma-delta T lymphocyte activation during immune response","type":"related"},{"name":"regulation of gamma-delta T-cell activation during immune response","type":"related"},{"name":"regulation of gamma-delta T-lymphocyte activation during immune response","type":"related"}],"termid":"GO:2001191"}


id: GO:0062170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform lutein.","definition_xrefs":["PMID:24397433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll metabolic process","termid":"GO:0016122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lutein metabolic process","synonyms":[{"name":"lutein metabolism","type":"exact"}],"termid":"GO:0062170"}


id: GO:1901045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of oviposition.","definition_xrefs":["GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of egg-laying behavior","termid":"GO:0046662"},{"relation_name":"is_a","term_name":"negative regulation of behavior","termid":"GO:0048521"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"egg-laying behavior","termid":"GO:0018991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of egg-laying behavior","synonyms":[{"name":"down regulation of egg laying","type":"broad"},{"name":"down regulation of egg-laying","type":"broad"},{"name":"down regulation of oviposition","type":"exact"},{"name":"down-regulation of egg laying","type":"broad"},{"name":"down-regulation of egg-laying","type":"broad"},{"name":"down-regulation of oviposition","type":"exact"},{"name":"downregulation of egg laying","type":"broad"},{"name":"downregulation of egg-laying","type":"broad"},{"name":"downregulation of oviposition","type":"exact"},{"name":"inhibition of egg laying","type":"broad"},{"name":"inhibition of egg-laying","type":"broad"},{"name":"inhibition of oviposition","type":"narrow"},{"name":"negative regulation of egg laying","type":"broad"},{"name":"negative regulation of egg-laying","type":"broad"},{"name":"negative regulation of oviposition","type":"exact"}],"termid":"GO:1901045"}


id: PBO:0002051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein Pkl1","termid":"PBO:0002051"}


id: FYPO:0006975
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is too low to detect during the meiotic cell cycle. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA absent from cell","termid":"FYPO:0001889"},{"relation_name":"is_a","term_name":"decreased RNA level during meiosis","termid":"FYPO:0002959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"RNA absent from cell during meiotic cell cycle","synonyms":[{"name":"transcripts absent from cell during meiotic cell cycle","type":"exact"},{"name":"undetectable cellular RNA level during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0006975"}


id: PBO:0046835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 5 pseudogene 8","termid":"PBO:0046835"}


id: PBO:0001457
data:
  {"annotation_feature_type":"gene","cv_name":"m_f_g","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone chaperone","termid":"PBO:0001457"}


id: GO:0031001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a brefeldin A stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to antibiotic","termid":"GO:0046677"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to brefeldin A","termid":"GO:0031001"}


id: PBO:0047566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 17","termid":"PBO:0047566"}


id: FYPO:0007771
data:
  {"alleles_by_uniquename":{"SJAG_03783:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03783","name":"vps24delta","uniquename":"SJAG_03783:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_03892:allele-2":{"allele_type":"amino_acid_mutation","description":"E233Q","gene_uniquename":"SJAG_03892","name":"Vps4-EQ","uniquename":"SJAG_03892:allele-2"},"SJAG_03892:allele-3":{"allele_type":"amino_acid_mutation","description":"I307T L327S","gene_uniquename":"SJAG_03892","name":"vps4-ts","uniquename":"SJAG_03892:allele-3"},"SJAG_04489:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04489","name":"did4delta","uniquename":"SJAG_04489:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115542],"is_not":false,"summary":null,"term":"FYPO:0007771"}],"single_locus_phenotype":[{"annotations":[115517,115518,115524,115525,115527,115528,115541,115543,115544,115545,115546,115547,115548],"is_not":false,"summary":null,"term":"FYPO:0007771"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which a protein is abnormally localized to one or more large clusters in the nuclear envelope. The protein may normally be distributed evenly in the nuclear envelope.","definition_xrefs":["PomBase:mah","PMID:32109380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nuclear envelope during vegetative growth","termid":"FYPO:0004885"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_04489":null,"SJAG_05207":null},"genotype_count":7,"genotypes_by_uniquename":{"Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"Vps4-EQ(E233Q aa)","display_uniquename":"Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-2","expression":"Not assayed or wild type"}]}]},"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"cmp7delta__vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cmp7delta vps4-ts(I307T L327S aa)","display_uniquename":"cmp7delta__vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-3","expression":"Not assayed or wild type"}]}]},"did4delta":{"display_name":"did4delta","display_uniquename":"did4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04489:allele-1","expression":"Null"}]}]},"vps24delta":{"display_name":"vps24delta","display_uniquename":"vps24delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03783:allele-1","expression":"Null"}]}]},"vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"vps4-ts(I307T L327S aa)","display_uniquename":"vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-3","expression":"Not assayed or wild type"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03892","SJAG_05207"],"name":"abnormally clustered protein localization to nuclear envelope","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_05207","SJAG_03892","SJAG_03783","SJAG_04489"],"single_locus_genotype_uniquenames":["cmp7delta","vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","vps4delta","did4delta","Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type","vps24delta"],"synonyms":[{"name":"abnormal protein localization to nuclear envelope, with protein in large clusters","type":"exact"},{"name":"abnormally clustered protein localisation to nuclear envelope","type":"exact"},{"name":"abnormally clustered protein localization to nuclear envelope during mitotic cell cycle","type":"related"},{"name":"abnormally clustered protein localization to nuclear envelope during vegetative growth","type":"exact"},{"name":"abnormally clustered protein localization to nuclear membrane","type":"related"}],"termid":"FYPO:0007771","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007771":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0036448
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Can't Stop Synthesising cell wall","termid":"PBO:0036448"}


id: PBO:0089946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S33","termid":"PBO:0089946"}


id: PBO:0078235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 17 (non-functional)","termid":"PBO:0078235"}


id: PBO:0064880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 catalytic subunit alpha","termid":"PBO:0064880"}


id: GO:0102060
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-cis,6-cis-farnesyl diphosphate = (-)-endo-alpha-bergamotene + diphosphoric acid.","definition_xrefs":["RHEA:30471","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"endo-alpha-bergamotene synthase activity","secondary_identifiers":["MetaCyc:RXN-10482","EC:4.2.3.54"],"synonyms":[{"name":"endo-alpha-bergamontene synthase activity","type":"exact"}],"termid":"GO:0102060"}


id: GO:0003799
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Inhibits the growth of, or directly kills, fungal cells.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete antifungal peptide activity (obsolete GO:0003799)","synonyms":[{"name":"antifungal peptide activity","type":"exact"}],"termid":"GO:0003799"}


id: GO:0018322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of a tyrosine molecule to a protein amino acid.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein tyrosinylation (obsolete GO:0018322)","synonyms":[{"name":"protein amino acid tyrosinylation","type":"exact"}],"termid":"GO:0018322"}


id: PBO:0052777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 19","termid":"PBO:0052777"}


id: PBO:0081088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 18","termid":"PBO:0081088"}


id: GO:2000551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T-helper 2 cell cytokine production.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell cytokine production","termid":"GO:0002724"},{"relation_name":"is_a","term_name":"regulation of type 2 immune response","termid":"GO:0002828"},{"relation_name":"regulates","term_name":"T-helper 2 cell cytokine production","termid":"GO:0035745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of T-helper 2 cell cytokine production","synonyms":[{"name":"regulation of Th2 cell cytokine production","type":"exact"}],"termid":"GO:2000551"}


id: PBO:0085732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the synthesis of GlcNAc-PI; GlcNAc-PI is the first intermediate in the synthesis of glycosylphosphatidylinositol (GPI) anchors; homologous to the human PIG-H protein; GlcNAc-PI stands for N-acetylglucosaminyl phosphatidylinositol","termid":"PBO:0085732"}


id: GO:0072677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of an eosinophil within or between different tissues and organs of the body.","definition_xrefs":["CL:0000771","GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"granulocyte migration","termid":"GO:0097530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eosinophil migration","termid":"GO:0072677"}


id: PBO:0041208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BZW1 antisense RNA 1","termid":"PBO:0041208"}


id: PBO:0056065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper protein 6","termid":"PBO:0056065"}


id: PBO:0004601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp16 (predicted)","termid":"PBO:0004601"}


id: GO:0051496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the assembly of a stress fiber, a bundle of microfilaments and other proteins found in fibroblasts.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of actin filament bundle assembly","termid":"GO:0032233"},{"relation_name":"is_a","term_name":"regulation of stress fiber assembly","termid":"GO:0051492"},{"relation_name":"positively_regulates","term_name":"stress fiber assembly","termid":"GO:0043149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"positively_regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0044085","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"positive regulation of stress fiber assembly","synonyms":[{"name":"activation of stress fiber formation","type":"narrow"},{"name":"positive regulation of stress fibre biosynthesis","type":"related"},{"name":"positive regulation of stress fibre formation","type":"related"},{"name":"stimulation of stress fiber formation","type":"narrow"},{"name":"up regulation of stress fiber formation","type":"related"},{"name":"up-regulation of stress fiber formation","type":"exact"},{"name":"upregulation of stress fiber formation","type":"related"}],"termid":"GO:0051496"}


id: FYPO:0001682
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha,alpha-trehalase activity increases normally (i.e. as in wild type) as a result of a salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal alpha,alpha-trehalase activity","termid":"FYPO:0001480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"normal alpha,alpha-trehalase activity increase during cellular response to salt stress","synonyms":[{"name":"normal increase in trehalase activity in response to salt stress","type":"exact"},{"name":"normal neutral trehalase activity increase during cellular response to salt stress","type":"exact"},{"name":"normal trehalase activity increase during cellular response to salt stress","type":"broad"}],"termid":"FYPO:0001682"}


id: PBO:0012000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WIP family cytoskeletal protein (predicted)","termid":"PBO:0012000"}


id: PBO:0012046
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"processive helicase activity of Mcm4/6/7 complex requires 3' and 5' overhangs","termid":"PBO:0012046"}


id: PBO:0057998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3922","termid":"PBO:0057998"}


id: FYPO:0006264
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic sister chromatid separation is decreased at the telomeric regions during anaphase B. The remainder of the sister chromatids may or may not separate normally.","definition_xrefs":["PomBase:mah","PMID:21540296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomeric DNA separation","termid":"FYPO:0005442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0000337","FYPO:0001985","FYPO:0000641","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased telomeric DNA separation during anaphase B","synonyms":[{"name":"decreased segregation of telomeric DNA during anaphase B","type":"related"},{"name":"decreased DNA separation at telomere during anaphase B","type":"exact"},{"name":"decreased mitotic sister chromatid separation at telomere during anaphase B","type":"exact"},{"name":"decreased mitotic telomeric DNA separation during anaphase B","type":"exact"},{"name":"decreased telomere disjunction during anaphase B","type":"exact"},{"name":"decreased telomere separation during anaphase B","type":"exact"},{"name":"decreased telomeric DNA separation during anaphase B during mitotic cell cycle","type":"related"},{"name":"decreased telomeric DNA separation during anaphase B during vegetative growth","type":"exact"},{"name":"decreased telomeric DNA separation during anaphase B of mitosis","type":"exact"},{"name":"increased sister chromatid telomere nondisjunction at anaphase B","type":"exact"},{"name":"increased taz1 foci at anaphase B","type":"related"},{"name":"reduced telomeric DNA separation during anaphase B","type":"related"}],"termid":"FYPO:0006264"}


id: PBO:0078020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 10","termid":"PBO:0078020"}


id: GO:0043515
data:
  {"annotated_genes":["SJAG_00684"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115512],"is_not":false,"summary":null,"term":"GO:0043515"}]},"cv_name":"molecular_function","definition":"Binding to a kinetochore, a proteinaceous structure on a condensed chromosome, beside the centromere, to which the spindle fibers are attached.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00684":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"kinetochore binding","references_by_uniquename":{"PMID:32109380":null},"termid":"GO:0043515","terms_by_termid":{"GO:0043515":null}}


id: FYPO:0005476
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of filamentous actin measured the cell is lower than normal when the cell is in the vegetative growth phase of the life cycle. The total actin level (globular and filamentous actin) may be normal or abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased filamentous actin level","synonyms":[{"name":"decreased accumulation of filamentous actin in cell","type":"related"},{"name":"decreased cellular F-actin level","type":"exact"},{"name":"decreased cellular filamentous actin level","type":"exact"},{"name":"decreased filamentous actin level during mitotic cell cycle","type":"related"},{"name":"decreased filamentous actin level during vegetative growth","type":"exact"},{"name":"reduced filamentous actin level","type":"exact"}],"termid":"FYPO:0005476"}


id: GO:1900026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of substrate adhesion-dependent cell spreading.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-substrate adhesion","termid":"GO:0010811"},{"relation_name":"is_a","term_name":"regulation of substrate adhesion-dependent cell spreading","termid":"GO:1900024"},{"relation_name":"positively_regulates","term_name":"substrate adhesion-dependent cell spreading","termid":"GO:0034446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of substrate adhesion-dependent cell spreading","synonyms":[{"name":"positive regulation of cell spreading during cell substrate adhesion","type":"exact"},{"name":"positive regulation of substrate adhesion dependent cell spreading","type":"exact"},{"name":"up regulation of cell spreading during cell substrate adhesion","type":"exact"},{"name":"up regulation of substrate adhesion dependent cell spreading","type":"exact"},{"name":"up regulation of substrate adhesion-dependent cell spreading","type":"related"}],"termid":"GO:1900026"}


id: FYPO:0002528
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which a protein is localized to the cell division site for a shorter time than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell division site","termid":"FYPO:0001401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased duration of protein localization to cell division site","synonyms":[{"name":"decreased duration of protein localisation to cell division site","type":"exact"},{"name":"decreased duration of protein localization to cell division site during mitotic cell cycle","type":"related"},{"name":"decreased duration of protein localization to cell division site during vegetative growth","type":"exact"},{"name":"decreased duration of protein recruitment to cell division site","type":"related"},{"name":"reduced duration of protein localization to cell division site","type":"exact"}],"termid":"FYPO:0002528"}


id: GO:0031242
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of a cell outer membrane consisting of gene products and protein complexes that are loosely bound to its external surface, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos","GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of cell outer membrane","termid":"GO:0031244"},{"relation_name":"part_of","term_name":"external side of cell outer membrane","termid":"GO:0031240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrinsic component of external side of cell outer membrane","synonyms":[{"name":"extrinsic to external leaflet of cell outer membrane","type":"exact"},{"name":"extrinsic to external side of cell outer membrane","type":"narrow"},{"name":"extrinsic to external side of outer membrane","type":"exact"}],"termid":"GO:0031242"}


id: PR:O43027
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rga6 gene.","definition_xrefs":["UniProtKB:O43027","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho-GTPase-activating protein 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC354.13","synonyms":[{"name":"Spom972h-rga6","type":"exact"}],"termid":"PR:O43027"}


id: PBO:0075913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 5","termid":"PBO:0075913"}


id: PBO:0068746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5E small nuclear 1","termid":"PBO:0068746"}


id: PBO:0043297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain containing 16A","termid":"PBO:0043297"}


id: PBO:0080587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDR11 divergent transcript","termid":"PBO:0080587"}


id: FYPO:0001580
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing leucine as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000139","FYPO:0002060","FYPO:0000003","FYPO:0002058","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on leucine nitrogen source","synonyms":[{"name":"normal cell population growth on leucine nitrogen source","type":"exact"},{"name":"normal cell population growth on monomeric leucine nitrogen source","type":"exact"},{"name":"normal leucine utilization","type":"related"},{"name":"normal monomeric leucine utilization","type":"related"},{"name":"normal vegetative cell population growth on leucine nitrogen source","type":"exact"}],"termid":"FYPO:0001580"}


id: PBO:0063478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide isomerase family A member 6","termid":"PBO:0063478"}


id: GO:0032242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of a nucleoside into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound transport","termid":"GO:0032239"},{"relation_name":"regulates","term_name":"nucleoside transport","termid":"GO:0015858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of nucleoside transport","termid":"GO:0032242"}


id: GO:0047399
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + 6-(D-glucose-1-phospho)-D-mannosylglycoprotein = D-mannosylglycoprotein + D-glucose-alpha-1-phosphate.","definition_xrefs":["MetaCyc:3.1.4.51-RXN","EC:3.1.4.51"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0140096","GO:0003674","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"glucose-1-phospho-D-mannosylglycoprotein phosphodiesterase activity","secondary_identifiers":["RHEA:18045"],"synonyms":[{"name":"6-(D-glucose-1-phospho)-D-mannosylglycoprotein glucose-1-phosphohydrolase activity","type":"related"},{"name":"alpha-glucose-1-phosphate phosphodiesterase activity","type":"related"}],"termid":"GO:0047399"}


id: FYPO:0002140
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of cellular pigment accumulation is increased during a cellular response to caffeine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular pigment accumulation","termid":"FYPO:0000741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular pigment accumulation during cellular response to caffeine","synonyms":[{"name":"abnormal cellular pigment accumulation during cellular response to caffeine","type":"exact"},{"name":"altered colony color during cellular response to caffeine","type":"related"},{"name":"altered colony colour during cellular response to caffeine","type":"related"},{"name":"increased cellular pigment accumulation during cellular response to caffeine during mitotic cell cycle","type":"related"},{"name":"increased cellular pigment accumulation during cellular response to caffeine during vegetative growth","type":"exact"}],"termid":"FYPO:0002140"}


id: GO:0048736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an appendage over time, from its formation to the mature structure. An appendage is an organ or part that is attached to the trunk of an organism, such as a limb or a branch.","definition_xrefs":["GOC:jid","GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"appendage development","termid":"GO:0048736"}


id: SO:0001068
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polypeptide_repeat is a single copy of an internal sequence repetition.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_conserved_region","termid":"SO:0100021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_repeat","secondary_identifiers":["BS:00070"],"synonyms":[{"name":"polypeptide repeat","type":"exact"},{"name":"repeat","type":"related"}],"termid":"SO:0001068"}


id: PBO:0050742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 4","termid":"PBO:0050742"}


id: PBO:0057555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR670 host gene","termid":"PBO:0057555"}


id: PBO:0043547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type I alpha receptor","termid":"PBO:0043547"}


id: PBO:0054488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1888","termid":"PBO:0054488"}


id: PR:Q9UTL6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A co-chaperone protein HscB that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01931","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"J-type co-chaperone jac1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.08","secondary_identifiers":["UniProtKB:Q9UTL6"],"synonyms":[{"name":"J-type accessory chaperone 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-hscB","type":"exact"}],"termid":"PR:Q9UTL6"}


id: GO:0019438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of aromatic compounds, any substance containing an aromatic carbon ring.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete aromatic compound biosynthetic process (obsolete GO:0019438)","termid":"GO:0019438"}


id: PR:O43037
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mnh1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein mago nashi homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.08c","synonyms":[{"name":"Spom972h-mnh1","type":"exact"}],"termid":"PR:O43037"}


id: GO:0042273
data:
  {"annotated_genes":["SJAG_02830","SJAG_05248","SJAG_03012","SJAG_02374","SJAG_02417","SJAG_02436","SJAG_04847","SJAG_00921","SJAG_00390","SJAG_01839","SJAG_00932","SJAG_04346","SJAG_04330","SJAG_01454","SJAG_04890","SJAG_02275","SJAG_04004","SJAG_01364","SJAG_03458","SJAG_01568","SJAG_00271","SJAG_03713","SJAG_03496","SJAG_04108","SJAG_01339","SJAG_01811","SJAG_03080","SJAG_02475","SJAG_04395","SJAG_03666","SJAG_02759","SJAG_04562","SJAG_01581","SJAG_02427","SJAG_04414","SJAG_00882","SJAG_03789","SJAG_00841","SJAG_00949","SJAG_04304","SJAG_04289","SJAG_03413","SJAG_01420","SJAG_04940","SJAG_04919","SJAG_03466","SJAG_01494","SJAG_04992","SJAG_05679","SJAG_01954","SJAG_01621","SJAG_03905","SJAG_00689","SJAG_04180","SJAG_02868","SJAG_02890","SJAG_00479","SJAG_03697","SJAG_05190","SJAG_00166","SJAG_01813","SJAG_01752","SJAG_03773","SJAG_00323","SJAG_05223","SJAG_02745","SJAG_01606","SJAG_04308","SJAG_02840","SJAG_01122","SJAG_02508","SJAG_04669","SJAG_00537","SJAG_00752","SJAG_04176","SJAG_04066","SJAG_00722","SJAG_04599","SJAG_01821","SJAG_00749","SJAG_02952","SJAG_02644","SJAG_03658","SJAG_04492","SJAG_01161","SJAG_02754","SJAG_02535"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84009,86013,86423,86878,87108,87109,88057,94468,96534,96793,97932,98971,99461,100619,101772,101773,103023,104002,104045,104226,107122,108346,108860,112186,112628,113362,114977,115029,115030],"is_not":false,"summary":null,"term":"GO:0042273"},{"annotations":[98581,95240,96650,96463,106865,99573,107501,108201,111845,94039,112727,89257,102045,103488,88857,88435,85692,108961,96791,105061,111844,112233,114960],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902626"},{"annotations":[87742,91014,114620,100178],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000448"},{"annotations":[88144,95519,97960,97961,100853,106793,101260,100345,111425,100195,94040,106794,112649,93133,83725,100116,112650,98582,111424,90891],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0180023"},{"annotations":[88952,109677,103927,114962,112235,88859,92279],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000470"},{"annotations":[110909,85907,102047,113716,76271,88436,75192,88145,94042,106867,113737,96792,94009,85694,111385],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000463"},{"annotations":[104435],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902775"},{"annotations":[70415,93542,89417,114253,98547,111719,73762,93543,73627,98548,76289],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000027"}]},"cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a large ribosomal subunit; includes transport to the sites of protein synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex biogenesis","termid":"GO:0022613"},{"relation_name":"part_of","term_name":"ribosome biogenesis","termid":"GO:0042254"}],"gene_count":87,"genes_by_uniquename":{"SJAG_00166":null,"SJAG_00271":null,"SJAG_00323":null,"SJAG_00390":null,"SJAG_00479":null,"SJAG_00537":null,"SJAG_00689":null,"SJAG_00722":null,"SJAG_00749":null,"SJAG_00752":null,"SJAG_00841":null,"SJAG_00882":null,"SJAG_00921":null,"SJAG_00932":null,"SJAG_00949":null,"SJAG_01122":null,"SJAG_01161":null,"SJAG_01339":null,"SJAG_01364":null,"SJAG_01420":null,"SJAG_01454":null,"SJAG_01494":null,"SJAG_01568":null,"SJAG_01581":null,"SJAG_01606":null,"SJAG_01621":null,"SJAG_01752":null,"SJAG_01811":null,"SJAG_01813":null,"SJAG_01821":null,"SJAG_01839":null,"SJAG_01954":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02417":null,"SJAG_02427":null,"SJAG_02436":null,"SJAG_02475":null,"SJAG_02508":null,"SJAG_02535":null,"SJAG_02644":null,"SJAG_02745":null,"SJAG_02754":null,"SJAG_02759":null,"SJAG_02830":null,"SJAG_02840":null,"SJAG_02868":null,"SJAG_02890":null,"SJAG_02952":null,"SJAG_03012":null,"SJAG_03080":null,"SJAG_03413":null,"SJAG_03458":null,"SJAG_03466":null,"SJAG_03496":null,"SJAG_03658":null,"SJAG_03666":null,"SJAG_03697":null,"SJAG_03713":null,"SJAG_03773":null,"SJAG_03789":null,"SJAG_03905":null,"SJAG_04004":null,"SJAG_04066":null,"SJAG_04108":null,"SJAG_04176":null,"SJAG_04180":null,"SJAG_04289":null,"SJAG_04304":null,"SJAG_04308":null,"SJAG_04330":null,"SJAG_04346":null,"SJAG_04395":null,"SJAG_04414":null,"SJAG_04492":null,"SJAG_04562":null,"SJAG_04599":null,"SJAG_04669":null,"SJAG_04847":null,"SJAG_04890":null,"SJAG_04919":null,"SJAG_04940":null,"SJAG_04992":null,"SJAG_05190":null,"SJAG_05223":null,"SJAG_05248":null,"SJAG_05679":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0042254"],"is_obsolete":false,"name":"ribosomal large subunit biogenesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ribosomal large subunit biogenesis and assembly","type":"exact"}],"termid":"GO:0042273","terms_by_termid":{"GO:0000027":null,"GO:0000448":null,"GO:0000463":null,"GO:0000470":null,"GO:0042273":null,"GO:0180023":null,"GO:1902626":null,"GO:1902775":null}}


id: MOD:00617
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a residue containing common isotopes to a 3x(2)H labeled residue methyl ester.","definition_xrefs":["OMSSA:21","Unimod:298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium labeled residue","termid":"MOD:00839"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3x(2)H residue methyl ester","synonyms":[{"name":"Methyl:2H(3)","type":"related"},{"name":"ctermpeptrideuteromethyl","type":"exact"},{"name":"deuterated methyl ester","type":"related"}],"termid":"MOD:00617"}


id: PBO:0004353
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystonia","termid":"PBO:0004353"}


id: PBO:0041351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement component 3 precursor pseudogene","termid":"PBO:0041351"}


id: PBO:0078300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (anticodon GTC) 2-5","termid":"PBO:0078300"}


id: SO:0001277
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A uridine base that has been modified.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_RNA_base_feature","termid":"SO:0000250"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_uridine","synonyms":[{"name":"modified uridine","type":"exact"}],"termid":"SO:0001277"}


id: PBO:0109112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 2B, tRNA N3-cytidine","termid":"PBO:0109112"}


id: GO:0005149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-1 receptor.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"interleukin-1 receptor binding","synonyms":[{"name":"IL-1","type":"narrow"},{"name":"interleukin-1 receptor ligand","type":"narrow"}],"termid":"GO:0005149"}


id: PBO:0050479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A7","termid":"PBO:0050479"}


id: PBO:0088603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-semialdehyde dehydrogenase","termid":"PBO:0088603"}


id: PBO:0051934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inter-alpha-trypsin inhibitor heavy chain 5","termid":"PBO:0051934"}


id: PBO:0076740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-complex 11 like 2","termid":"PBO:0076740"}


id: GO:0106024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate of onset of pupariation.","definition_xrefs":["PMID:26510564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of post-embryonic development","termid":"GO:0048581"},{"relation_name":"is_a","term_name":"regulation of pupariation","termid":"GO:0106023"},{"relation_name":"negatively_regulates","term_name":"pupariation","termid":"GO:0035073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pupariation","termid":"GO:0106024"}


id: GO:0061475
data:
  {"annotated_genes":["SJAG_00443"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100718],"is_not":false,"summary":null,"term":"GO:0061475"}]},"cv_name":"biological_process","definition":"The process of coupling valine to valyl-tRNA in the cytosol, catalyzed by valyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"valyl-tRNA aminoacylation","termid":"GO:0006438"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00443":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"cytosolic valyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061475","terms_by_termid":{"GO:0061475":null}}


id: MOD:00702
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes atoms of particular common isotopes with atoms or groups containing isotopes that are not the most common.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isotope labeled residue","synonyms":[{"name":"IsoTagRes","type":"exact"},{"name":"SILAC","type":"exact"}],"termid":"MOD:00702"}


id: PBO:0088826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNAJ domain protein Mdj1","termid":"PBO:0088826"}


id: GO:1900555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving emericellamide.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid metabolic process","termid":"GO:0006629"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"depsipeptide metabolic process","termid":"GO:0050761"},{"relation_name":"is_a","term_name":"lactam metabolic process","termid":"GO:0072338"},{"relation_name":"is_a","term_name":"lactone metabolic process","termid":"GO:1901334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629","GO:0019748"],"is_obsolete":false,"name":"emericellamide metabolic process","synonyms":[{"name":"emericellamide metabolism","type":"exact"}],"termid":"GO:1900555"}


id: GO:0001192
data:
  {"annotated_genes":["SJAG_00119"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001193"}]},"cv_name":"biological_process","definition":"Suppression of the occurrence of transcriptional errors, such as substitutions and/or insertions of nucleotides that do not correctly match the template base, during the process of transcription elongation on a DNA template.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA biosynthetic process","termid":"GO:0032774"},{"relation_name":"part_of","term_name":"DNA-templated transcription elongation","termid":"GO:0006354"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00119":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"maintenance of transcriptional fidelity during transcription elongation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0001194"],"synonyms":[{"name":"maintenance of transcriptional fidelity during DNA-dependent transcription elongation","type":"exact"},{"name":"maintenance of transcriptional fidelity during DNA-dependent transcription elongation from bacterial-type RNA polymerase promoter","type":"exact"},{"name":"maintenance of transcriptional fidelity during DNA-templated transcription elongation","type":"exact"},{"name":"maintenance of transcriptional fidelity during DNA-templated transcription elongation from bacterial-type RNA polymerase promoter","type":"narrow"}],"termid":"GO:0001192","terms_by_termid":{"GO:0001193":null}}


id: MOD:01259
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["PubMed:9448752","Unimod:314#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylmaleimide derivatized residue","termid":"MOD:00625"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-methylmaleimide - site K","synonyms":[{"name":"Nmethylmaleimide","type":"related"}],"termid":"MOD:01259"}


id: PR:Q9P7H1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tyrosine-protein phosphatase Clp1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PomBase:MAH","PMID:11683392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine-protein phosphatase Clp1","termid":"PR:000027623"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine-protein phosphatase Clp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1782.09c","secondary_identifiers":["UniProtKB:Q9P7H1","PR:000027624"],"synonyms":[{"name":"CDC fourteen-like phosphatase 1","type":"exact"},{"name":"CLP1","type":"related"},{"name":"FLP1","type":"related"},{"name":"SPAC1782.09C","type":"related"},{"name":"Spom972h-clp1","type":"exact"},{"name":"tyrosine-protein phosphatase CDC14 homolog","type":"exact"}],"termid":"PR:Q9P7H1"}


id: GO:0048529
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: magnesium protoporphyrin IX 13-monomethyl ester + 3 NADPH + 3 H+ + 3 O2 = divinylprotochlorophyllide + 3 NADP+ + 5 H2O.","definition_xrefs":["RHEA:33235","EC:1.14.13.81"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity","synonyms":[{"name":"Mg-protoporphyrin IX monomethyl ester (oxidative) cyclase activity","type":"related"},{"name":"Mg-protoporphyrin IX monomethyl ester oxidative cyclase activity","type":"related"},{"name":"magnesium-protoporphyrin-IX 13-monomethyl ester,NADPH:oxygen oxidoreductase (hydroxylating)","type":"related"}],"termid":"GO:0048529"}


id: PATO:0000923
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000923 relative width (obsolete PATO:0000923)","termid":"PATO:0000923"}


id: FYPO:0003852
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing FR901464.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002058","FYPO:0002060","FYPO:0000003","FYPO:0002057","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on FR901464","synonyms":[{"name":"normal cell population growth in presence of FR901464","type":"exact"},{"name":"normal cell population growth on FR901464","type":"exact"},{"name":"normal cellular response to FR901464","type":"related"},{"name":"normal vegetative cell population growth on FR901464","type":"exact"}],"termid":"FYPO:0003852"}


id: SO:0000986
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The attribute of whether a nucleotide polymer is linear or circular.","direct_ancestors":[{"relation_name":"is_a","term_name":"polymer_attribute","termid":"SO:0000443"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"topology_attribute","synonyms":[{"name":"topology attribute","type":"exact"}],"termid":"SO:0000986"}


id: GO:1902643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process.","definition_xrefs":["PMID:22562153","GOC:di","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phospholipid catabolic process","termid":"GO:0060697"},{"relation_name":"is_a","term_name":"regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","termid":"GO:1902641"},{"relation_name":"positively_regulates","term_name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","termid":"GO:1902634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","synonyms":[{"name":"activation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate breakdown","type":"narrow"},{"name":"activation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","type":"narrow"},{"name":"activation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolism","type":"narrow"},{"name":"activation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate degradation","type":"narrow"},{"name":"positive regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate breakdown","type":"exact"},{"name":"positive regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolism","type":"exact"},{"name":"positive regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate degradation","type":"exact"},{"name":"up regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate breakdown","type":"exact"},{"name":"up regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","type":"exact"},{"name":"up regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolism","type":"exact"},{"name":"up regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate degradation","type":"exact"},{"name":"up-regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate breakdown","type":"exact"},{"name":"up-regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","type":"exact"},{"name":"up-regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolism","type":"exact"},{"name":"up-regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate degradation","type":"exact"},{"name":"upregulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate breakdown","type":"exact"},{"name":"upregulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","type":"exact"},{"name":"upregulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolism","type":"exact"},{"name":"upregulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate degradation","type":"exact"}],"termid":"GO:1902643"}


id: GO:0017004
data:
  {"annotated_genes":["SJAG_00449","SJAG_03046","SJAG_03099","SJAG_02979","SJAG_05199","SJAG_01996","SJAG_04154","SJAG_05398","SJAG_04560","SJAG_01140","SJAG_05302","SJAG_04116","SJAG_04639","SJAG_00217","SJAG_06392","SJAG_02480","SJAG_03337","SJAG_01405","SJAG_01141","SJAG_06002","SJAG_05305","SJAG_03322","SJAG_00852","SJAG_03296","SJAG_04553","SJAG_02229","SJAG_04348","SJAG_04603","SJAG_02975","SJAG_06046","SJAG_03399","SJAG_03873"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84134,101620,113031],"is_not":false,"summary":null,"term":"GO:0017004"},{"annotations":[84928,88131,93421,98184,99829,100081,103223,110758,98622,111099,113286,91696,100327,90714,103427,114411,85288,85094,103537,113128,97755,90729,98148,102909,87701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033617"},{"annotations":[95066,113120,104680,103649,108912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034551"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a cytochrome complex. A cytochrome complex is a protein complex in which at least one of the proteins is a cytochrome, i.e. a heme-containing protein involved in catalysis of redox reactions.","definition_xrefs":["GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00217":null,"SJAG_00449":null,"SJAG_00852":null,"SJAG_01140":null,"SJAG_01141":null,"SJAG_01405":null,"SJAG_01996":null,"SJAG_02229":null,"SJAG_02480":null,"SJAG_02975":null,"SJAG_02979":null,"SJAG_03046":null,"SJAG_03099":null,"SJAG_03296":null,"SJAG_03322":null,"SJAG_03337":null,"SJAG_03399":null,"SJAG_03873":null,"SJAG_04116":null,"SJAG_04154":null,"SJAG_04348":null,"SJAG_04553":null,"SJAG_04560":null,"SJAG_04603":null,"SJAG_04639":null,"SJAG_05199":null,"SJAG_05302":null,"SJAG_05305":null,"SJAG_05398":null,"SJAG_06002":null,"SJAG_06046":null,"SJAG_06392":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"cytochrome complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytochrome biogenesis","type":"broad"}],"termid":"GO:0017004","terms_by_termid":{"GO:0017004":null,"GO:0033617":null,"GO:0034551":null}}


id: PBO:0051829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon regulatory factor 4","termid":"PBO:0051829"}


id: GO:0036223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of adenine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to adenine starvation","synonyms":[{"name":"cellular response to adenine deprivation","type":"exact"}],"termid":"GO:0036223"}


id: GO:0102951
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-acetate + L-phenylalanine + ATP = H+ + indole-3-acetyl-phenylalanine + AMP + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:6.3.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"indole-3-acetyl-phenylalanine synthetase activity","secondary_identifiers":["MetaCyc:RXN-9084"],"termid":"GO:0102951"}


id: GO:0021601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the abducens nerve to attain its fully functional state. The motor function of the abducens nerve is to contract the lateral rectus which results in abduction of the eye.","definition_xrefs":["ISBN:0838580343","GOC:jid","GO_REF:0000021","GOC:cls","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"abducens nerve development","termid":"GO:0021560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"abducens nerve maturation","synonyms":[{"name":"CN VI maturation","type":"related"}],"termid":"GO:0021601"}


id: GO:0034146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to toll-like receptor 5.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface toll-like receptor signaling pathway","termid":"GO:0140895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"toll-like receptor 5 signaling pathway","synonyms":[{"name":"TLR5 signaling pathway","type":"exact"},{"name":"toll-like receptor 5 signalling pathway","type":"exact"}],"termid":"GO:0034146"}


id: GO:0045339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of farnesyl diphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid catabolic process","termid":"GO:0009395"},{"relation_name":"is_a","term_name":"terpenoid catabolic process","termid":"GO:0016115"},{"relation_name":"is_a","term_name":"farnesyl diphosphate metabolic process","termid":"GO:0045338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"farnesyl diphosphate catabolic process","synonyms":[{"name":"farnesyl diphosphate breakdown","type":"exact"},{"name":"farnesyl diphosphate catabolism","type":"exact"},{"name":"farnesyl diphosphate degradation","type":"exact"}],"termid":"GO:0045339"}


id: PBO:0071637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 1","termid":"PBO:0071637"}


id: PBO:0075027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-38","termid":"PBO:0075027"}


id: GO:0060681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth of a branch of the ureteric bud along its axis.","definition_xrefs":["GOC:dph","PMID:16916378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branch elongation of an epithelium","termid":"GO:0060602"},{"relation_name":"part_of","term_name":"branching involved in ureteric bud morphogenesis","termid":"GO:0001658"},{"relation_name":"part_of","term_name":"ureteric bud elongation","termid":"GO:0060677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branch elongation involved in ureteric bud branching","termid":"GO:0060681"}


id: PBO:0044095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 47 member A3","termid":"PBO:0044095"}


id: PBO:0058845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8074","termid":"PBO:0058845"}


id: GO:0021980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of cells from one site to another in the subpallium.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:dph","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telencephalon cell migration","termid":"GO:0022029"},{"relation_name":"part_of","term_name":"subpallium development","termid":"GO:0021544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"subpallium cell migration","termid":"GO:0021980"}


id: PBO:0035805
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3_acetylation_during_vegetative_growth","termid":"PBO:0035805"}


id: PBO:0076169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 1B member 1","termid":"PBO:0076169"}


id: GO:0005490
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A cytochrome b that has a sulfur atom ligated to the iron of the prosthetic group (heme-thiolate); enzymes:typically monooxygenases acting on lipophilic substrates.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome P450 (obsolete GO:0005490)","synonyms":[{"name":"cytochrome P450","type":"exact"}],"termid":"GO:0005490"}


id: PBO:0052319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1191","termid":"PBO:0052319"}


id: PBO:0056392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase binding protein 1","termid":"PBO:0056392"}


id: GO:0050583
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + H2 = NADPH + H+.","definition_xrefs":["MetaCyc:1.12.1.3-RXN","EC:1.12.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor, NAD or NADP as acceptor","termid":"GO:0016696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"hydrogen dehydrogenase (NADP+) activity","secondary_identifiers":["RHEA:18637"],"synonyms":[{"name":"NADP-linked hydrogenase activity","type":"related"},{"name":"NADP-reducing hydrogenase activity","type":"related"},{"name":"hydrogen:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0050583"}


id: PBO:0076222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPT4 homolog, DSIF elongation factor subunit pseudogene","termid":"PBO:0076222"}


id: GO:0061572
data:
  {"annotated_genes":["SJAG_03088","SJAG_00938","SJAG_04703","SJAG_04498","SJAG_04621","SJAG_00677","SJAG_04522","SJAG_01388","SJAG_03011","SJAG_02864","SJAG_00970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95708,104188,112250,114700],"is_not":false,"summary":null,"term":"GO:0061572"},{"annotations":[85393,101189,89879,114699,97774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051017"},{"annotations":[112251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061573"},{"annotations":[85394,94352,94092,104189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071520"},{"annotations":[104190,112252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070649"},{"annotations":[101193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110009"},{"annotations":[103668],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032231"}]},"cv_name":"biological_process","definition":"A process that results in the assembly, arrangement of constituent parts, or disassembly of an actin filament bundle.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament organization","termid":"GO:0007015"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00677":null,"SJAG_00938":null,"SJAG_00970":null,"SJAG_01388":null,"SJAG_02864":null,"SJAG_03011":null,"SJAG_03088":null,"SJAG_04498":null,"SJAG_04522":null,"SJAG_04621":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"actin filament bundle organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actin filament cable organization","type":"related"}],"termid":"GO:0061572","terms_by_termid":{"GO:0032231":null,"GO:0051017":null,"GO:0061572":null,"GO:0061573":null,"GO:0070649":null,"GO:0071520":null,"GO:0110009":null}}


id: PBO:0088437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dubious, no evidence for translation on annotated strand","termid":"PBO:0088437"}


id: GO:1902866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of retina development in camera-type eye.","definition_xrefs":["GOC:TermGenie","PMID:16872597","GO_REF:0000058","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"retina development in camera-type eye","termid":"GO:0060041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of retina development in camera-type eye","synonyms":[{"name":"regulation of retina development in camera-style eye","type":"exact"},{"name":"regulation of retinal development","type":"related"}],"termid":"GO:1902866"}


id: SO:0001731
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 8th residue (a lysine), from the start of the H4 histone protein is acetylated.","definition_xrefs":["SO:KE"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_4_acetylation_site","termid":"SO:0001972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H4K8_acetylation_site","synonyms":[{"name":"H4K8 acetylation site","type":"exact"},{"name":"H4K8ac","type":"exact"}],"termid":"SO:0001731"}


id: PBO:0049586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 clustered histone 4","termid":"PBO:0049586"}


id: GO:0070983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of a dendrite is directed to a specific target site in response to a combination of attractive and repulsive cues.","definition_xrefs":["GOC:sart","PMID:15046878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection guidance","termid":"GO:0097485"},{"relation_name":"part_of","term_name":"dendrite morphogenesis","termid":"GO:0048813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendrite guidance","synonyms":[{"name":"dendritic guidance","type":"exact"}],"termid":"GO:0070983"}


id: FYPO:0005889
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sodium chloride. Cells stop growing (and may die) at a concentration of sodium chloride that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to sodium chloride","synonyms":[{"name":"hypersensitive to sodium chloride","type":"exact"},{"name":"sensitive to NaCl","type":"exact"},{"name":"sensitive to sodium chloride during mitotic cell cycle","type":"related"},{"name":"sensitive to sodium chloride during vegetative growth","type":"exact"}],"termid":"FYPO:0005889"}


id: FYECO:0000386
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were blocked using camptothecin (CPT) and subsequently released from the block.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping condition combinations","termid":"FYECO:0000238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPT block and release","termid":"FYECO:0000386"}


id: FYPO:0005519
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of nucleosome-dependent ATPase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0000652","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"abnormal nucleosome-dependent ATPase activity","termid":"FYPO:0005519"}


id: GO:1905737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-proline import across plasma membrane.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24344203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of proline import across plasma membrane","termid":"GO:1902836"},{"relation_name":"is_a","term_name":"regulation of L-proline import across plasma membrane","termid":"GO:1905735"},{"relation_name":"positively_regulates","term_name":"L-proline import across plasma membrane","termid":"GO:1904271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of L-proline import across plasma membrane","termid":"GO:1905737"}


id: GO:0018830
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gamma-hexachlorocyclohexane + HCl = 1,3(R),4(S),5(S),6(R)-pentachlorocyclohexene.","definition_xrefs":["UM-BBD_enzymeID:e0359"],"gene_count":0,"genotype_count":0,"name":"obsolete gamma-hexachlorocyclohexane dehydrochlorinase activity (obsolete GO:0018830)","termid":"GO:0018830"}


id: PBO:0069376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 636, pseudogene","termid":"PBO:0069376"}


id: PBO:0075441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted protein acidic and cysteine rich","termid":"PBO:0075441"}


id: PBO:0051160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-41 (pseudogene)","termid":"PBO:0051160"}


id: PBO:0054028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1359","termid":"PBO:0054028"}


id: GO:0009180
data:
  {"annotated_genes":["SJAG_02038"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of purine ribonucleoside diphosphate, a compound consisting of a purine base linked to a ribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside diphosphate biosynthetic process","termid":"GO:0009136"},{"relation_name":"is_a","term_name":"purine ribonucleoside diphosphate metabolic process","termid":"GO:0009179"},{"relation_name":"is_a","term_name":"ribonucleoside diphosphate biosynthetic process","termid":"GO:0009188"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02038":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"purine ribonucleoside diphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"purine ribonucleoside diphosphate anabolism","type":"exact"},{"name":"purine ribonucleoside diphosphate biosynthesis","type":"exact"},{"name":"purine ribonucleoside diphosphate formation","type":"exact"},{"name":"purine ribonucleoside diphosphate synthesis","type":"exact"}],"termid":"GO:0009180","terms_by_termid":{"GO:0006172":null}}


id: PBO:0044906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DET1 partner of COP1 E3 ubiquitin ligase","termid":"PBO:0044906"}


id: PR:Q9USQ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spa1 gene.","definition_xrefs":["UniProtKB:Q9USQ5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine decarboxylase antizyme (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC577.14c","synonyms":[{"name":"ODC-Az (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-spa1","type":"exact"}],"termid":"PR:Q9USQ5"}


id: FYPO:0005534
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 16 of histone H4 in telomeric regions occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3 acetylation during vegetative growth","termid":"FYPO:0002361"},{"relation_name":"is_a","term_name":"decreased histone H4 acetylation during vegetative growth","termid":"FYPO:0005011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0002494","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"decreased histone H4-K16 acetylation at telomere during vegetative growth","synonyms":[{"name":"decreased histone H4-K16 acetylation at telomere during mitotic cell cycle","type":"related"},{"name":"reduced histone H4-K16 acetylation at telomere during vegetative growth","type":"exact"}],"termid":"FYPO:0005534"}


id: PATO:0015004
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A increase in the ability of a process to produce its output.","definition_xrefs":["PATOC:PortlandMeetingFeb2015"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased process quality","termid":"PATO:0002304"},{"relation_name":"is_a","term_name":"process efficacy","termid":"PATO:0015002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased efficacy","termid":"PATO:0015004"}


id: GO:0033708
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: isocitrate + NAD+ = 2-oxoglutarate + CO2 + NADH, and (1R,2S)-1-hydroxybutane-1,2,4-tricarboxylate + NAD+ = 2-oxoadipate + CO2 + NADH + H+.","definition_xrefs":["EC:1.1.1.286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"isocitrate-homoisocitrate dehydrogenase activity","secondary_identifiers":["MetaCyc:ISOCITRATE-DEHYDROGENASE-NAD+-RXN","MetaCyc:RXN-7970"],"synonyms":[{"name":"PH1722","type":"related"},{"name":"homoisocitrate-isocitrate dehydrogenase activity","type":"related"},{"name":"isocitrate(homoisocitrate):NAD+ oxidoreductase (decarboxylating) activity","type":"related"}],"termid":"GO:0033708"}


id: GO:0048541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of Peyer's patches over time, from their formation to the mature structure. Peyer's patches are typically found as nodules associated with gut epithelium with distinct internal structures including B- and T-zones for the activation of lymphocytes.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucosa-associated lymphoid tissue development","termid":"GO:0048537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Peyer's patch development","synonyms":[{"name":"GALT development","type":"related"},{"name":"gut-associated lymphoid tissue development","type":"related"}],"termid":"GO:0048541"}


id: FYPO:0007641
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the methylation of lysine at position 9 of histone H3 occurs to a lower extent than normal during G0 phase.","definition_xrefs":["PMID:27738016","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone modification during G0","termid":"FYPO:0007470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0002274","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased histone H3-K9 methylation during G0","synonyms":[{"name":"decreased histone H3 K9 methylation during G0","type":"exact"},{"name":"decreased histone H3-K9 methylation during cell quiescence","type":"exact"},{"name":"decreased histone H3-K9 methylation during quiescence","type":"exact"},{"name":"decreased histone H3K9 methylation during G0","type":"exact"},{"name":"decreased histone H3K9me2 methylation during G0","type":"exact"},{"name":"reduced histone H3-K9 methylation during G0","type":"exact"}],"termid":"FYPO:0007641"}


id: PBO:0085439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Poly(A)RNA binding protein involved in nuclear mRNA export; component of the nuclear pore; ortholog of human TAP","termid":"PBO:0085439"}


id: GO:0070898
data:
  {"annotated_genes":["SJAG_03120","SJAG_03007"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99133,112278],"is_not":false,"summary":null,"term":"GO:0070898"}]},"cv_name":"biological_process","definition":"The formation of a large multiprotein-DNA complex that self-assembles on a tRNA gene through the sequential recruitment of the general initiation factors that compose the preinitiation complex (PIC), (which includes BDP1, BRF1, TBP, TFIIIC in human). The PIC engages RNA polymerase III on its DNA template strand and sparks polymerization of the first few RNA nucleotides.","definition_xrefs":["PMID:11387215","PMID:12381659","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription preinitiation complex assembly","termid":"GO:0070897"},{"relation_name":"part_of","term_name":"transcription initiation at RNA polymerase III promoter","termid":"GO:0006384"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03007":null,"SJAG_03120":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0010467","GO:0006351","GO:0044085"],"is_obsolete":false,"name":"RNA polymerase III preinitiation complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0001020","GO:0000999","GO:0001021","GO:0001043"],"synonyms":[{"name":"RNA polymerase III hybrid type promoter transcriptional preinitiation complex assembly","type":"narrow"},{"name":"RNA polymerase III transcription PIC biosynthesis","type":"exact"},{"name":"RNA polymerase III transcription PIC formation","type":"exact"},{"name":"RNA polymerase III transcriptional preinitiation complex assembly","type":"exact"},{"name":"RNA polymerase III transcriptional preinitiation complex formation","type":"exact"},{"name":"RNA polymerase III type 1 promoter transcriptional preinitiation complex assembly","type":"narrow"},{"name":"RNA polymerase III type 2 promoter transcriptional preinitiation complex assembly","type":"narrow"},{"name":"RNA polymerase III type 3 promoter transcriptional preinitiation complex assembly","type":"narrow"}],"termid":"GO:0070898","terms_by_termid":{"GO:0070898":null}}


id: GO:1903913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fusion of virus membrane with host plasma membrane.","definition_xrefs":["PMID:23575248","GOC:TermGenie","GO_REF:0000058","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral entry into host cell","termid":"GO:0046596"},{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"fusion of virus membrane with host plasma membrane","termid":"GO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"regulation of fusion of virus membrane with host plasma membrane","synonyms":[{"name":"regulation of viral entry into host cell via membrane fusion with the plasma membrane","type":"related"},{"name":"regulation of viral envelope fusion","type":"broad"},{"name":"regulation of viral envelope fusion with host cell membrane","type":"exact"},{"name":"regulation of viral envelope fusion with host membrane","type":"exact"},{"name":"regulation of viral envelope fusion with host plasma membrane","type":"exact"},{"name":"regulation of viral penetration via membrane fusion","type":"exact"},{"name":"regulation of viral-cell fusion molecule activity","type":"related"}],"termid":"GO:1903913"}


id: GO:0150088
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A single axon terminal bouton making contact onto two or more dendritic spines protruding from multiple dendrites.","definition_xrefs":["PMID:22028887","PMID:8366344","PMID:24487234","PMID:7482800","GOC:aruk","PMID:11248111","GOC:bc","PMID:10586883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple synapse bouton","termid":"GO:0150086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"multiple synapse bouton, contacting multiple dendrites","synonyms":[{"name":"MSB2","type":"exact"},{"name":"type 2 multi-synapse bouton","type":"exact"},{"name":"type 2 multi-synaptic bouton","type":"exact"},{"name":"type 2 multiple spine synapse bouton","type":"exact"},{"name":"type 2 multiple-synapse bouton","type":"exact"},{"name":"type 2 multisynapse bouton","type":"exact"},{"name":"type 2 multisynaptic bouton","type":"exact"}],"termid":"GO:0150088"}


id: PBO:0065690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentraxin 4","termid":"PBO:0065690"}


id: PBO:0048486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"germinal center associated signaling and motility like","termid":"PBO:0048486"}


id: PBO:0052708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18","termid":"PBO:0052708"}


id: PBO:0061698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear protein 2, transcriptional regulator","termid":"PBO:0061698"}


id: GO:0044148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the increase in size or mass of an organism occurring in, on or near the exterior of its host organism.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of growth of symbiont involved in interaction with host (obsolete GO:0044148)","synonyms":[{"name":"positive regulation of growth of symbiont during interaction with host","type":"related"}],"termid":"GO:0044148"}


id: PBO:0077553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 259","termid":"PBO:0077553"}


id: GO:0010036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a boron-containing substance stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to boron-containing substance","synonyms":[{"name":"response to boron","type":"exact"}],"termid":"GO:0010036"}


id: PBO:0084735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial intermediate peptidase; cleaves destabilizing N-terminal residues of a subset of proteins upon import, after their cleavage by mitochondrial processing peptidase (Mas1p-Mas2p); may contribute to mitochondrial iron homeostasis","termid":"PBO:0084735"}


id: PBO:0056262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAM domain containing 2","termid":"PBO:0056262"}


id: FYPO:0005802
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of one or more proteins within the plasma membrane of the cell tip occurs more quickly than normal.","definition_xrefs":["PomBase:mah","PMID:25837586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein movement within plasma membrane during vegetative growth","termid":"FYPO:0005800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased rate of protein movement within plasma membrane at cell tip","synonyms":[{"name":"fast protein movement within plasma membrane at cell tip","type":"exact"},{"name":"increased rate of protein movement within plasma membrane at cell tip during mitotic cell cycle","type":"related"},{"name":"increased rate of protein movement within plasma membrane at cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0005802"}


id: FYPO:0009031
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of bleomycin than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0002682","FYPO:0000139"],"is_obsolete":false,"name":"resistance to bleomycin","synonyms":[{"name":"resistance to bleomycin during mitotic cell cycle","type":"related"},{"name":"resistance to bleomycin during vegetative growth","type":"exact"},{"name":"resistant to bleomycin","type":"exact"}],"termid":"FYPO:0009031"}


id: FYPO:0004806
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the cell wall is broken down to a lesser extent than in wild type at the site of cell-cell fusion during mating.","definition_xrefs":["PomBase:mah","PMID:25825517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall disassembly at cell fusion site","termid":"FYPO:0006499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0004805"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0004805","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"incomplete cell wall disassembly at cell fusion site","synonyms":[{"name":"incomplete cell wall disassembly at cell fusion site during conjugation with cellular fusion","type":"exact"},{"name":"incomplete cell wall disassembly at cell fusion site during mating","type":"exact"},{"name":"incomplete cell wall disassembly at cell-cell fusion focus","type":"exact"},{"name":"incomplete cell wall disassembly at cell-cell fusion site","type":"exact"},{"name":"incomplete fungal-type cell wall disassembly at cell fusion site","type":"exact"},{"name":"incomplete fungal-type cell wall disassembly involved in conjugation with cellular fusion","type":"exact"}],"termid":"FYPO:0004806"}


id: PR:Q9UT08
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- paa1 gene.","definition_xrefs":["UniProtKB:Q9UT08","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase PP2A regulatory subunit A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP8A3.09c","synonyms":[{"name":"PR65 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-paa1","type":"exact"},{"name":"protein phosphatase 2A 65 kDa regulatory subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT08"}


id: PR:G2TRR5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP8B7.32 gene.","definition_xrefs":["UniProtKB:G2TRR5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P8B7.32 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.32","synonyms":[{"name":"Spom972h-SPBP8B7.32","type":"exact"}],"termid":"PR:G2TRR5"}


id: PBO:0066722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 19","termid":"PBO:0066722"}


id: GO:0001683
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete axonemal dynein heavy chain (obsolete GO:0001683)","synonyms":[{"name":"axonemal dynein heavy chain","type":"exact"}],"termid":"GO:0001683"}


id: PBO:0080293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 57 pseudogene","termid":"PBO:0080293"}


id: GO:0099573
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The post-synaptic specialization of a glutamatergic excitatory synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic density","termid":"GO:0014069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"glutamatergic postsynaptic density","synonyms":[{"name":"postsynaptic specialization, glutamatergic neuron-to-neuron synapse","type":"exact"}],"termid":"GO:0099573"}


id: GO:0035002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The clearance of liquid from the epithelial tubes of an open tracheal system, shortly before the emergence of the larva, to generate an air-filled tubule system.","definition_xrefs":["GOC:mtg_sensu","PMID:12571352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial fluid transport","termid":"GO:0042045"},{"relation_name":"part_of","term_name":"open tracheal system development","termid":"GO:0007424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"liquid clearance, open tracheal system","synonyms":[{"name":"tracheal liquid clearance","type":"exact"}],"termid":"GO:0035002"}


id: PBO:0071568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 34","termid":"PBO:0071568"}


id: SO:0000169
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence in eukaryotic DNA to which RNA polymerase I binds, to begin transcription.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eukaryotic_promoter","termid":"SO:0002221"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNApol_I_promoter","synonyms":[{"name":"RNA polymerase A promoter","type":"exact"},{"name":"RNApol I promoter","type":"exact"},{"name":"pol I promoter","type":"exact"},{"name":"polymerase I promoter","type":"exact"}],"termid":"SO:0000169"}


id: PBO:0035994
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_movement_within_plasma_membrane_during_vegetative_growth","termid":"PBO:0035994"}


id: GO:0015971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of guanine tetraphosphate (5'-ppGpp-3'), a derivative of guanine riboside with four phosphates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"guanosine tetraphosphate metabolic process","termid":"GO:0015969"},{"relation_name":"is_a","term_name":"purine ribonucleoside bisphosphate catabolic process","termid":"GO:0034037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"guanosine tetraphosphate catabolic process","synonyms":[{"name":"guanosine tetraphosphate (5'-ppGpp-3') catabolic process","type":"exact"},{"name":"guanosine tetraphosphate (5'-ppGpp-3') catabolism","type":"exact"},{"name":"guanosine tetraphosphate breakdown","type":"exact"},{"name":"guanosine tetraphosphate catabolism","type":"exact"},{"name":"guanosine tetraphosphate degradation","type":"exact"}],"termid":"GO:0015971"}


id: PBO:0065172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prokineticin 2","termid":"PBO:0065172"}


id: PR:P78958
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glyceraldehyde-3-phosphate dehydrogenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.11","secondary_identifiers":["UniProtKB:P78958"],"synonyms":[{"name":"GAPDH 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GAPDH","type":"exact"}],"termid":"PR:P78958"}


id: GO:1903205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of hydrogen peroxide-induced cell death.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:PARL","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of hydrogen peroxide-induced cell death (obsolete GO:1903205)","synonyms":[{"name":"protection against hydrogen peroxide-mediated cell death","type":"related"},{"name":"regulation of cell death in response to H2O2","type":"exact"},{"name":"regulation of cell death in response to hydrogen peroxide","type":"exact"},{"name":"regulation of hydrogen peroxide-mediated cell death","type":"related"}],"termid":"GO:1903205"}


id: GO:0042117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a monocyte resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor.","definition_xrefs":["GOC:mgi_curators","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte activation","termid":"GO:0002274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"monocyte activation","termid":"GO:0042117"}


id: PBO:0004860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribokinase (predicted)","termid":"PBO:0004860"}


id: PBO:0000487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU-rRNA maturation protein Tsr3 (predicted)","termid":"PBO:0000487"}


id: PBO:0108600
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-indirectly_causally_upstream_of","termid":"PBO:0108600"}


id: GO:0048506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a change in identity of a meristem at a characteristic predetermined time point.","definition_xrefs":["GOC:tb","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of development, heterochronic","termid":"GO:0040034"},{"relation_name":"is_a","term_name":"regulation of meristem development","termid":"GO:0048509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of timing of meristematic phase transition","termid":"GO:0048506"}


id: FYPO:0003483
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is normally localized to discrete regions in the nucleus, visible as foci or dots by microscopy, is abnormally localized such that fewer dots are observed than in normal (wild type) cells during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased punctate nuclear protein localization","termid":"FYPO:0002624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased punctate nuclear protein localization during cellular response to ionizing radiation","synonyms":[{"name":"decreased punctate nuclear protein localisation during cellular response to ionising radiation","type":"exact"},{"name":"decreased punctate nuclear protein localization during cellular response to IR","type":"exact"},{"name":"decreased punctate nuclear protein localization during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"decreased punctate nuclear protein localization during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"reduced punctate nuclear protein localization during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0003483"}


id: PBO:0114418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACER antisense RNA 1","termid":"PBO:0114418"}


id: GO:0070119
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the cytokine ciliary neurotrophic factor.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ciliary neurotrophic factor binding","synonyms":[{"name":"CNTF binding","type":"exact"}],"termid":"GO:0070119"}


id: GO:0022871
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + sorbose(out) = protein histidine + sorbose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["RHEA:49296","PMID:10613875","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose transmembrane transporter activity","termid":"GO:0005355"},{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"sorbose transmembrane transporter activity","termid":"GO:0019194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-sorbose phosphotransferase system transporter activity","secondary_identifiers":["MetaCyc:RXN-15094","EC:2.7.1.206"],"synonyms":[{"name":"sorbose PTS transporter activity","type":"exact"}],"termid":"GO:0022871"}


id: GO:0031308
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the nuclear outer membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of nuclear outer membrane (obsolete GO:0031308)","synonyms":[{"name":"intrinsic to nuclear outer membrane","type":"narrow"}],"termid":"GO:0031308"}


id: GO:0042598
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any of the small, heterogeneous, artifactual, vesicular particles that are formed when some cells are homogenized.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete vesicular fraction (obsolete GO:0042598)","synonyms":[{"name":"vesicular fraction","type":"exact"}],"termid":"GO:0042598"}


id: GO:0052031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with the ability of the host to mount a defense in response to its presence. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by symbiont of host process","termid":"GO:0044003"},{"relation_name":"is_a","term_name":"response to host defenses","termid":"GO:0052200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host defense response","secondary_identifiers":["GO:0052255"],"synonyms":[{"name":"mitigation by symbiont of host defense response","type":"exact"},{"name":"modulation by organism of defense response of other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by symbiont of host defense response","type":"exact"},{"name":"pathogenesis","type":"related"},{"name":"perturbation by symbiont of host defense response","type":"exact"}],"termid":"GO:0052031"}


id: PBO:0052580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kininogen 1","termid":"PBO:0052580"}


id: PBO:0059127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-methylpurine DNA glycosylase","termid":"PBO:0059127"}


id: PBO:0034644
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_viability_upon_nitrogen_starvation","termid":"PBO:0034644"}


id: GO:0051413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cortisone stimulus. Cortisone is a natural glucocorticoid steroid hormone that is metabolically convertible to cortisol. Cortisone is synthesized from cholesterol in the cortex of the adrenal gland under the stimulation of adrenocorticotropin hormone (ACTH). The main physiological effect of cortisone is on carbohydrate metabolism; it can stimulate increased glucose release from the liver, increased liver glycogen synthesis, and decreased utilization of glucose by the tissues.","definition_xrefs":["PMID:11276391","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to glucocorticoid","termid":"GO:0051384"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cortisone","synonyms":[{"name":"response to cortisone stimulus","type":"exact"}],"termid":"GO:0051413"}


id: GO:0062063
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a BBSome complex.","definition_xrefs":["PMID:20603001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"BBSome binding","termid":"GO:0062063"}


id: PBO:0070401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RP1 like 1","termid":"PBO:0070401"}


id: PBO:0090175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome-c reductase complex subunit 6","termid":"PBO:0090175"}


id: PBO:0073796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 3","termid":"PBO:0073796"}


id: GO:0070112
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Either of the lipid bilayers that surround an organellar chromatophore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"part_of","term_name":"organellar chromatophore","termid":"GO:0070111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"organellar chromatophore membrane","synonyms":[{"name":"Paulinella-type chromatophore membrane","type":"exact"}],"termid":"GO:0070112"}


id: GO:0045724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the formation of a cilium.","definition_xrefs":["GOC:go_curators","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120034"},{"relation_name":"is_a","term_name":"regulation of cilium assembly","termid":"GO:1902017"},{"relation_name":"is_a","term_name":"positive regulation of organelle assembly","termid":"GO:1902117"},{"relation_name":"positively_regulates","term_name":"cilium assembly","termid":"GO:0060271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of cilium assembly","synonyms":[{"name":"activation of cilium assembly","type":"narrow"},{"name":"positive regulation of flagellum assembly","type":"broad"},{"name":"positive regulation of flagellum biogenesis","type":"related"},{"name":"stimulation of cilium assembly","type":"narrow"},{"name":"up regulation of cilium assembly","type":"exact"},{"name":"up-regulation of cilium assembly","type":"exact"},{"name":"upregulation of cilium assembly","type":"exact"}],"termid":"GO:0045724"}


id: PATO:0000918
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A 3-D extent quality inhering in a bearer by virtue of the bearer's amount of 3-dimensional space it occupies.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-D extent","termid":"PATO:0001710"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"volume","termid":"PATO:0000918"}


id: PBO:0041307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 27A","termid":"PBO:0041307"}


id: GO:0062175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of brexanolone.","definition_xrefs":["PMID:24390875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid catabolic process","termid":"GO:0006706"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"brexanolone metabolic process","termid":"GO:0062173"},{"relation_name":"is_a","term_name":"organic hydroxy compound catabolic process","termid":"GO:1901616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629","GO:0044248"],"is_obsolete":false,"name":"brexanolone catabolic process","synonyms":[{"name":"allopregnanolone breakdown","type":"exact"},{"name":"allopregnanolone catabolic process","type":"exact"},{"name":"allopregnanolone catabolism","type":"exact"},{"name":"allopregnanolone degradation","type":"exact"},{"name":"allotetrahydroprogesterone breakdown","type":"exact"},{"name":"allotetrahydroprogesterone catabolic process","type":"exact"},{"name":"allotetrahydroprogesterone catabolism","type":"exact"},{"name":"allotetrahydroprogesterone degradation","type":"exact"},{"name":"brexanolone breakdown","type":"exact"},{"name":"brexanolone catabolism","type":"exact"},{"name":"brexanolone degradation","type":"exact"}],"termid":"GO:0062175"}


id: FYPO:0007725
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to late endosomes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to late endosome","synonyms":[{"name":"normal protein localisation to late endosome","type":"exact"},{"name":"normal protein localization to PVE","type":"exact"},{"name":"normal protein localization to late endosome during mitotic cell cycle","type":"related"},{"name":"normal protein localization to late endosome during vegetative growth","type":"exact"},{"name":"normal protein localization to prevacuolar compartment","type":"exact"},{"name":"normal protein localization to prevacuolar endosome","type":"exact"}],"termid":"FYPO:0007725"}


id: GO:0141071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont subverts a MAPK signal transduction pathway in the host organism by initiating, promoting, or enhancing its activation. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:24043761","PMID:25675415","PMID:28166272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated activation of host signal transduction pathway","termid":"GO:0052028"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host MAPK cascade","termid":"GO:0052080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated activation of host MAPK cascade","synonyms":[{"name":"activation by symbiont of host MAPK signal transduction pathway","type":"narrow"},{"name":"induction by symbiont of host MAP kinase signal transduction pathway","type":"exact"},{"name":"induction of host MAPK kinase signaling pathway","type":"exact"},{"name":"stimulation by symbiont of host MAPK signal transduction pathway","type":"narrow"},{"name":"symbiont-mediated activation of host MAPK signal transduction pathway","type":"exact"}],"termid":"GO:0141071"}


id: PBO:0090850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Ufe1","termid":"PBO:0090850"}


id: PBO:0067107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 149, pseudogene","termid":"PBO:0067107"}


id: GO:0099137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Development of a chimeric, non-reproductive fruiting body in which cells of all genotypes have an equal chance of becoming a spore cell.","definition_xrefs":["PMID:18272966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chimeric non-reproductive fruiting body development","termid":"GO:0099136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"altruistic, chimeric, non-reproductive fruiting body development","synonyms":[{"name":"fully co-operative, chimeric, non-reproductive fruiting body development","type":"exact"}],"termid":"GO:0099137"}


id: PBO:0052277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 5D","termid":"PBO:0052277"}


id: GO:0016608
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of growth hormone-releasing hormone, any of a family of peptide hormones that act on the anterior pituitary to stimulate the secretion of growth hormone and exert a trophic effect on the gland.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone activity","termid":"GO:0005179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0098772","GO:0140677","GO:0005515"],"is_obsolete":false,"name":"growth hormone-releasing hormone activity","synonyms":[{"name":"GHRF activity","type":"exact"},{"name":"GHRH activity","type":"exact"}],"termid":"GO:0016608"}


id: PBO:0040828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"baculoviral IAP repeat containing 3","termid":"PBO:0040828"}


id: PBO:0015266
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucosidase 2 Beta Subunit","termid":"PBO:0015266"}


id: GO:0001006
data:
  {"annotated_genes":["SJAG_03120","SJAG_00421"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91647,99136],"is_not":false,"summary":null,"term":"GO:0001006"}]},"cv_name":"molecular_function","definition":"Binding to a sequence of DNA that is a part of a type 3 promoter that controls transcription by RNA polymerase III (Pol III). A type 3 Pol III promoter is composed of elements upstream of the transcription start site, including a TATA box. The human U6 snRNA gene has a type 3 promoter. Type 3 Pol III promoters have not been observed in S. cerevisiae.","definition_xrefs":["GOC:txnOH","PMID:12381659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase III cis-regulatory region sequence-specific DNA binding","termid":"GO:0000992"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00421":null,"SJAG_03120":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0000976","GO:0003674"],"is_obsolete":false,"name":"RNA polymerase III type 3 promoter sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0001032"],"synonyms":[{"name":"RNA polymerase III type 3 promoter DNA binding","type":"related"}],"termid":"GO:0001006","terms_by_termid":{"GO:0001006":null}}


id: GO:2001114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to hepatocyte growth factor stimulus.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of cellular response to hepatocyte growth factor stimulus","termid":"GO:2001112"},{"relation_name":"positively_regulates","term_name":"cellular response to hepatocyte growth factor stimulus","termid":"GO:0035729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to hepatocyte growth factor stimulus","synonyms":[{"name":"positive regulation of cellular response to HGF stimulus","type":"exact"}],"termid":"GO:2001114"}


id: SO:1001191
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is alternately spliced, and encodes more than one polypeptide, that have overlapping peptide sequences, but use different start codons.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"encodes_overlapping_peptides","termid":"SO:1001195"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encodes_overlapping_peptides_different_start","synonyms":[{"name":"encodes overlapping peptides different start","type":"exact"}],"termid":"SO:1001191"}


id: GO:0014850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a muscle activity stimulus.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to activity","termid":"GO:0014823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to muscle activity","termid":"GO:0014850"}


id: GO:0018516
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-chlorobenzoyl-CoA + chloride + NADP+ = 2,4-dichlorobenzoyl-CoA + NADPH.","definition_xrefs":["RHEA:23076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond","termid":"GO:0046992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"2,4-dichlorobenzoyl-CoA reductase activity","secondary_identifiers":["EC:1.21.1.2","MetaCyc:1.3.1.63-RXN","KEGG_REACTION:R05276","UM-BBD_reactionID:r0138"],"synonyms":[{"name":"4-chlorobenzoyl-CoA:NADP+ oxidoreductase (halogenating)","type":"related"}],"termid":"GO:0018516"}


id: GO:0008942
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NH4+ + 3 NAD(P)+ + 2 H2O = nitrite + 3 NAD(P)H + 5 H+.","definition_xrefs":["EC:1.7.1.4","PMID:31961593"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor","termid":"GO:0046857"},{"relation_name":"is_a","term_name":"nitrite reductase activity","termid":"GO:0098809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"nitrite reductase [NAD(P)H] activity","secondary_identifiers":["KEGG_REACTION:R00789","MetaCyc:RXN0-6377","RHEA:24632","KEGG_REACTION:R00787"],"synonyms":[{"name":"NAD(P)H2:nitrite oxidoreductase activity","type":"related"},{"name":"NAD(P)H:nitrite oxidoreductase activity","type":"related"},{"name":"NADH-nitrite oxidoreductase activity","type":"related"},{"name":"NADPH-nitrite reductase activity","type":"related"},{"name":"ammonium-hydroxide:NAD(P)+ oxidoreductase activity","type":"related"},{"name":"assimilatory nitrite reductase activity","type":"related"},{"name":"nitrite reductase (reduced nicotinamide adenine dinucleotide (phosphate)) activity","type":"related"},{"name":"nitrite reductase [NAD(P)H2]","type":"related"}],"termid":"GO:0008942"}


id: PBO:0078406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon CCC) 1-2","termid":"PBO:0078406"}


id: PBO:0054027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1358","termid":"PBO:0054027"}


id: PBO:0084119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Heme a synthase; required for the hydroxylation of heme O to form heme A, an essential prosthetic group for cytochrome c oxidase; oligomerization is required for function","termid":"PBO:0084119"}


id: GO:0031772
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 orexin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orexin receptor binding","termid":"GO:0042324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"type 2 orexin receptor binding","synonyms":[{"name":"OX2 orexin receptor binding","type":"exact"},{"name":"type 2 hypocretin receptor binding","type":"exact"},{"name":"type 2 hypocretin receptor ligand","type":"narrow"}],"termid":"GO:0031772"}


id: PBO:0051776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQCA1 antisense RNA 1","termid":"PBO:0051776"}


id: GO:0044515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of glucagon-like peptide receptor 1 activity in of the bitten organism.","definition_xrefs":["GOC:fj","PMID:8405712","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of glucagon-like peptide receptor 1 activity in another organism","termid":"GO:0044512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in positive regulation of glucagon-like peptide receptor 1 activity in another organism","synonyms":[{"name":"envenomation resulting in positive regulation of glucagon-like peptide receptor 1 activity in other organism","type":"exact"}],"termid":"GO:0044515"}


id: FYPO:0002302
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is spheroid, and undergoes two or more rounds of cell division and then dies.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, abnormal morphology","termid":"FYPO:0002148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000004","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, spheroid cell","synonyms":[{"name":"inviable after spore germination, multiple cell divisions, rounded cell","type":"exact"},{"name":"inviable following spore germination, multiple cell divisions, spheroid cell","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, spheroid cell","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, spheroid cell","type":"exact"}],"termid":"FYPO:0002302"}


id: GO:0046186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of acetaldehyde, a colorless, flammable liquid intermediate in the metabolism of alcohol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetaldehyde metabolic process","termid":"GO:0006117"},{"relation_name":"is_a","term_name":"aldehyde biosynthetic process","termid":"GO:0046184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acetaldehyde biosynthetic process","synonyms":[{"name":"acetaldehyde anabolism","type":"exact"},{"name":"acetaldehyde biosynthesis","type":"exact"},{"name":"acetaldehyde formation","type":"exact"},{"name":"acetaldehyde synthesis","type":"exact"}],"termid":"GO:0046186"}


id: PBO:0084854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; mutation confers increased replicative lifespan","termid":"PBO:0084854"}


id: GO:0090615
data:
  {"annotated_genes":["SJAG_04377","SJAG_00077","SJAG_04885","SJAG_00428","SJAG_00797"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86024,92314,99998,106663],"is_not":false,"summary":null,"term":"GO:0090615"},{"annotations":[105948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140040"}]},"cv_name":"biological_process","definition":"Steps involved in processing precursor RNAs arising from transcription of operons in the mitochondrial genome into mature mRNAs.","definition_xrefs":["GOC:tb","PMID:25181358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA metabolic process","termid":"GO:0000959"},{"relation_name":"is_a","term_name":"mitochondrial RNA processing","termid":"GO:0000963"},{"relation_name":"is_a","term_name":"mRNA processing","termid":"GO:0006397"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00077":null,"SJAG_00428":null,"SJAG_00797":null,"SJAG_04377":null,"SJAG_04885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0140053","GO:0008150"],"is_obsolete":false,"name":"mitochondrial mRNA processing","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090615","terms_by_termid":{"GO:0090615":null,"GO:0140040":null}}


id: GO:0015665
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of an alcohol from one side of a membrane to the other. An alcohol is any carbon compound that contains a hydroxyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transmembrane transporter activity","termid":"GO:1901618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"alcohol transmembrane transporter activity","termid":"GO:0015665"}


id: PBO:0038827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM like decysin 1","termid":"PBO:0038827"}


id: PBO:0039249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 1 family member L2","termid":"PBO:0039249"}


id: PBO:0012033
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tandem fusion protein in S. cerevisiae, SPBC3H7.11 is related to the N-terminal region of YOR239W","termid":"PBO:0012033"}


id: PBO:0072459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 23","termid":"PBO:0072459"}


id: GO:0120519
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + N-terminal L-methionyl-[tubulin] = CoA + H+ + N-terminal N(alpha)-acetyl-L-methionyl-[tubulin]. The N-terminus of both alpha- and beta-tubulin are acetylated.","definition_xrefs":["EC:2.3.1.308","RHEA:69607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide alpha-N-acetyltransferase activity","termid":"GO:0004596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0034212"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0034212","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"tubulin N-terminal N-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R12978","MetaCyc:RXN-22633"],"termid":"GO:0120519"}


id: FYPO:0004633
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is decreased during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity","termid":"FYPO:0001382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"decreased protein kinase activity during meiosis II","synonyms":[{"name":"decreased protein kinase activity during second meiotic nuclear division","type":"exact"},{"name":"reduced protein kinase activity during meiosis II","type":"exact"}],"termid":"FYPO:0004633"}


id: PBO:0053121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipocalin 12","termid":"PBO:0053121"}


id: PBO:0055660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3100","termid":"PBO:0055660"}


id: PBO:0080208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vestigial like family member 2","termid":"PBO:0080208"}


id: GO:0072180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the mesonephric duct are generated and organized. A mesonephric duct is a tube drains the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric tubule morphogenesis","termid":"GO:0072171"},{"relation_name":"is_a","term_name":"nephric duct morphogenesis","termid":"GO:0072178"},{"relation_name":"part_of","term_name":"mesonephric duct development","termid":"GO:0072177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric duct morphogenesis","synonyms":[{"name":"Wolffian duct morphogenesis","type":"related"}],"termid":"GO:0072180"}


id: PBO:0069302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 558, pseudogene","termid":"PBO:0069302"}


id: GO:0038083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation by a protein of one or more of its own tyrosine amino acid residues, or a tyrosine residue on an identical protein.","definition_xrefs":["PMID:10940390","PMID:10037737","PMID:10068444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-tyrosine phosphorylation","termid":"GO:0018108"},{"relation_name":"is_a","term_name":"protein autophosphorylation","termid":"GO:0046777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-tyrosine autophosphorylation","synonyms":[{"name":"RTK autophosphorylation","type":"narrow"},{"name":"receptor tyrosine kinase autophosphorylation","type":"narrow"},{"name":"tyrosine autophosphorylation","type":"exact"}],"termid":"GO:0038083"}


id: GO:0150116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell-substrate junction organization.","definition_xrefs":["GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"cell-substrate junction organization","termid":"GO:0150115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell-substrate junction organization","termid":"GO:0150116"}


id: GO:0070747
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-35 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-35 receptor activity","synonyms":[{"name":"IL-35 receptor activity","type":"exact"},{"name":"IL-35R","type":"exact"}],"termid":"GO:0070747"}


id: GO:0034878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxyisonicotinate + acceptor + H2O = citrazinate + reduced acceptor.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxyisonicotinate dehydrogenase activity (obsolete GO:0034878)","termid":"GO:0034878"}


id: MOD:01896
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by trifluoroacetic acid forming an adduct, either a salt or a hydrogen bonded carboxylic acid dimer, with an amino acid residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorinated residue","termid":"MOD:00498"},{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trifluoroacetic acid adduct","synonyms":[{"name":"TFA","type":"exact"}],"termid":"MOD:01896"}


id: PBO:0108750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase complex I'' complex ING family homolog Png3","termid":"PBO:0108750"}


id: PBO:0028519
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_rate_of_microtubule_polymerization","termid":"PBO:0028519"}


id: PBO:0070989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 13","termid":"PBO:0070989"}


id: PATO:0001985
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being kept below its freezing point.","definition_xrefs":["OBI:OBI"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temperature","termid":"PATO:0000146"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frozen","termid":"PATO:0001985"}


id: PATO:0000693
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000693 late (obsolete PATO:0000693)","termid":"PATO:0000693"}


id: PBO:0001721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein beta subunit (predicted)","termid":"PBO:0001721"}


id: PR:000050533
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H4, hhf2 gene translation product (Schizosaccharomyces pombe) that has had the initiator methionine removed and that has been dimethylated at the position equivalent to Lys-21 of the amino acid sequence represented by UniProtKB:P09322. UniProtKB:P09322, 2-103, Lys-21, MOD:00084.","definition_xrefs":["PomBase:VW","PRO:DAN","PMID:22150589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4, hhf2 gene translation product (Schizosaccharomyces pombe)","termid":"PR:000050527"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hhf2/Me2(K20)","pombase_gene_id":"SPBC8D2.03c","synonyms":[{"name":"PRO_0000158357, Lys-21, MOD:00084","type":"exact"},{"name":"PomBase_original_PRO_term_name: histone H4, hhf2 gene translation product, initiator methionine removed dimethylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hhf2/InitMet-/Me2:1","type":"exact"},{"name":"UniProtKB:P09322, 2-103, Lys-21, MOD:00084","type":"broad"},{"name":"hhf2/Me2(K20)","type":"exact"},{"name":"histone H4 K20me2 (Schizosaccharomyces pombe)","type":"broad"},{"name":"histone H4 hhf2 K20me2 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000050533"}


id: GO:0031504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the peptidoglycan-based cell wall.","definition_xrefs":["GOC:jl","GOC:mah","GOC:mtg_sensu","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall organization","termid":"GO:0071555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"peptidoglycan-based cell wall organization","synonyms":[{"name":"peptidoglycan-based cell wall organisation","type":"exact"},{"name":"peptidoglycan-based cell wall organization and biogenesis","type":"related"}],"termid":"GO:0031504"}


id: PBO:0083425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YAL027W and the verified gene DRS2","termid":"PBO:0083425"}


id: GO:1990125
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homotetrameric protein complex consisting of a symmetrical pair of DiaA homodimers. Facilitates DnaA binding to the origin of replication during replication initiation.","definition_xrefs":["GOC:bhm","PMID:17699754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DiaA complex","synonyms":[{"name":"DiaA homotetramer","type":"exact"}],"termid":"GO:1990125"}


id: PR:G2TRM6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- new4 gene.","definition_xrefs":["UniProtKB:G2TRM6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein new4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H5.13","synonyms":[{"name":"Spom972h-new4","type":"exact"}],"termid":"PR:G2TRM6"}


id: GO:0018921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-hydroxybenzyl alcohol, an aromatic compound which is an intermediate in several metabolic pathways, including the biosynthesis of patulin, a toxin and antiviral agent produced by some moulds such as Penicillium patulinum.","definition_xrefs":["UM-BBD_pathwayID:mcr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"3-hydroxybenzyl alcohol metabolic process","synonyms":[{"name":"3-hydroxybenzyl alcohol metabolism","type":"exact"}],"termid":"GO:0018921"}


id: PBO:0041891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catsper channel auxiliary subunit zeta","termid":"PBO:0041891"}


id: PBO:0036139
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_methylation_during_vegetative_growth","termid":"PBO:0036139"}


id: PBO:0065636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN11 pseudogene 5","termid":"PBO:0065636"}


id: PBO:0090419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ragulator complex subunit, human LAMTOR1 ortholog","termid":"PBO:0090419"}


id: PBO:0085148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleoporin involved in nucleocytoplasmic transport; binds to either the nucleoplasmic or cytoplasmic faces of the nuclear pore complex depending on Ran-GTP levels; also has a role in chromatin organization","termid":"PBO:0085148"}


id: GO:0045313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a rhabdomere membrane.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane biogenesis","termid":"GO:0044091"},{"relation_name":"part_of","term_name":"rhabdomere development","termid":"GO:0042052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"rhabdomere membrane biogenesis","termid":"GO:0045313"}


id: PBO:0091589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, poly(A) bearing, possible SPAC22E12.02 UTR","termid":"PBO:0091589"}


id: PBO:0091317
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana AtSGP2","termid":"PBO:0091317"}


id: PBO:0083333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF YFL015C","termid":"PBO:0083333"}


id: PBO:0080503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wound and keratinocyte migration associated lncRNA 2","termid":"PBO:0080503"}


id: PBO:0056292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monoamine oxidase A","termid":"PBO:0056292"}


id: PBO:0089346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tim8-Tim13 mitochondrial intermembrane space protein transporter complex subunit Tim13","termid":"PBO:0089346"}


id: PBO:0048848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gonadotropin releasing hormone 1","termid":"PBO:0048848"}


id: PBO:0029980
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_trifluoperazine","termid":"PBO:0029980"}


id: SO:0002332
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A biological region implicated in inherited changes caused by mechanisms other than changes in the underlying DNA sequence.","definition_xrefs":["SO:ds"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"epigenetically_modified","termid":"SO:0000133"},{"relation_name":"is_a","term_name":"epigenetically_modified_region","termid":"SO:0001720"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epigenomically_modified_region","secondary_identifiers":["https://epi.grants.cancer.gov/epigen/#\\:~\\:text=mail.nih.gov-\\,Overview\\,a%20cell%20or%20entire%20organism."],"synonyms":[{"name":"epigenomically modified region","type":"exact"}],"termid":"SO:0002332"}


id: GO:2000288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of myoblast proliferation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of myoblast proliferation","termid":"GO:2000291"},{"relation_name":"positively_regulates","term_name":"myoblast proliferation","termid":"GO:0051450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myoblast proliferation","termid":"GO:2000288"}


id: GO:0034423
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed within the autophagosome double-membrane.","definition_xrefs":["GOC:autophagy","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar lumen","termid":"GO:0005775"},{"relation_name":"part_of","term_name":"autophagosome","termid":"GO:0005776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005773","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"autophagosome lumen","synonyms":[{"name":"autophagic vacuole lumen","type":"exact"}],"termid":"GO:0034423"}


id: PBO:0062074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 5","termid":"PBO:0062074"}


id: GO:0044630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that modulates the frequency, rate or extent of the lectin pathway of complement activation, in a different organism.","definition_xrefs":["GOC:jl","PMID:20837040"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of complement activation, lectin pathway in another organism (obsolete GO:0044630)","synonyms":[{"name":"modulation of complement activation, lectin pathway in other organism","type":"exact"},{"name":"regulation of complement activation, lectin pathway in other organism","type":"exact"}],"termid":"GO:0044630"}


id: PBO:0056832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MGAT2 pseudogene 1","termid":"PBO:0056832"}


id: GO:0034877
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: isonicotinate + acceptor + H2O = 2-hydroxyisonicotinate + reduced acceptor.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete isonicotinate dehydrogenase activity (obsolete GO:0034877)","termid":"GO:0034877"}


id: FYPO:0007338
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 4 of histone H3 in centromeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K4 methylation at centromere during vegetative growth","termid":"FYPO:0007337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H3-K4 trimethylation at centromere during vegetative growth","synonyms":[{"name":"increased centromeric histone H3-K4 trimethylation during vegetative growth","type":"exact"},{"name":"increased histone H3 K4 trimethylation at centromere","type":"exact"},{"name":"increased histone H3-K4 trimethylation at centromere during mitotic cell cycle during vegetative growth","type":"related"},{"name":"increased histone H3-K4 trimethylation at centromeric region","type":"exact"},{"name":"increased histone H3K4 trimethylation at centromere","type":"exact"},{"name":"increased histone H3K4me3 at centromere","type":"exact"},{"name":"increased histone lysine H3 K4 trimethylation at centromere","type":"exact"}],"termid":"FYPO:0007338"}


id: PBO:0056106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYPLA1 pseudogene 1","termid":"PBO:0056106"}


id: GO:0043307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a eosinophil resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"granulocyte activation","termid":"GO:0036230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eosinophil activation","termid":"GO:0043307"}


id: GO:0035653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a macromolecular complex between proteins of the AP-1 adaptor complex and proteins and/or lipoproteins that are going to be transported by a clathrin-coated vesicle. The AP-1 adaptor protein complex is a component of the cytoplasmic coat found on clathrin-coated vesicles, and binds to sorting signals of cargo to facilitate their trafficking.","definition_xrefs":["GOC:lb","PMID:16162817","PMID:12802059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin-coated vesicle cargo loading","termid":"GO:0035652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0016192"],"is_obsolete":false,"name":"clathrin-coated vesicle cargo loading, AP-1-mediated","synonyms":[{"name":"cargo loading into clathrin-coated vesicle, AP-1-mediated","type":"exact"}],"termid":"GO:0035653"}


id: PBO:0001825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribulose phosphate 3-epimerase (predicted)","termid":"PBO:0001825"}


id: MOD:00261
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-tyrosine residue and 5'-phosphouridine through a phosphodiester bond to form O4'-(phospho-5'-uridine)-L-tyrosine.","definition_xrefs":["PubMed:2885322","RESID:AA0256","DeltaMass:0","Unimod:417#Y","PubMed:11467524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"uridylated residue","termid":"MOD:01166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O4'-(phospho-5'-uridine)-L-tyrosine","synonyms":[{"name":"(S)-2-amino-3-[4-(5'-uridine phosphonoxy)phenyl]propanoic acid","type":"exact"},{"name":"5'-uridylic-O-tyrosine","type":"exact"},{"name":"MOD_RES O-UMP-tyrosine","type":"exact"},{"name":"O-Uridinylylation (of Tyrosine)","type":"exact"},{"name":"O4'-(phospho-5'-uridine)-L-tyrosine","type":"exact"},{"name":"O4'-L-tyrosine 5'-uridine phosphodiester","type":"exact"},{"name":"OUMPTyr","type":"exact"},{"name":"PhosphoUridine","type":"related"},{"name":"hydrogen 5'-uridylate tyrosine ester","type":"exact"},{"name":"uridine phosphodiester","type":"related"}],"termid":"MOD:00261"}


id: GO:1990714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of galactose from UDP-galactose to hydroxyproline residues present in the peptide backbone.","definition_xrefs":["PMID:25600942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosyltransferase activity","termid":"GO:0008378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"hydroxyproline O-galactosyltransferase activity","synonyms":[{"name":"HPGT","type":"exact"}],"termid":"GO:1990714"}


id: GO:0009145
data:
  {"annotated_genes":["SJAG_01298","SJAG_02105","SJAG_01471","SJAG_03114","SJAG_02887","SJAG_04849","SJAG_00915","SJAG_MIT37","SJAG_04122","SJAG_02598","SJAG_07003","SJAG_00133","SJAG_05204","SJAG_00885","SJAG_04422","SJAG_00985","SJAG_00542","SJAG_MIT15","SJAG_00438","SJAG_02564","SJAG_03925","SJAG_MIT09","SJAG_00836"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96133,98300,104325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[66567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015986"},{"annotations":[111912,89331,99718,103954,115121,115132,89926,99099,115127,104840,97875,85195,88904,103864,90898,99747,101050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[103314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009216"},{"annotations":[114067],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905706"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of purine nucleoside triphosphate, a compound consisting of a purine base linked to a ribose or deoxyribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate biosynthetic process","termid":"GO:0009142"},{"relation_name":"is_a","term_name":"purine nucleoside triphosphate metabolic process","termid":"GO:0009144"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00885":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01298":null,"SJAG_01471":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02887":null,"SJAG_03114":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04422":null,"SJAG_04849":null,"SJAG_05204":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"purine nucleoside triphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"purine nucleoside triphosphate anabolism","type":"exact"},{"name":"purine nucleoside triphosphate biosynthesis","type":"exact"},{"name":"purine nucleoside triphosphate formation","type":"exact"},{"name":"purine nucleoside triphosphate synthesis","type":"exact"}],"termid":"GO:0009145","terms_by_termid":{"GO:0006183":null,"GO:0009216":null,"GO:0015986":null,"GO:0042776":null,"GO:1905706":null}}


id: PATO:0000992
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality of a liquid inhering in a bearer by virtue of the bearer's disposition to internal resistance to flow.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quality of a liquid","termid":"PATO:0001548"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"viscosity","termid":"PATO:0000992"}


id: GO:0015572
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of N-acetylglucosamine from one side of a membrane to the other. The D isomer of N-acetylglucosamine is a common structural unit of glycoproteins in plants, bacteria and animals; it is often the terminal sugar of an oligosaccharide group of a glycoprotein.","definition_xrefs":["ISBN:0815340729","GOC:ai","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"N-acetylglucosamine transmembrane transporter activity","secondary_identifiers":["GO:0015580"],"synonyms":[{"name":"D-GlcNAc transmembrane transporter activity","type":"exact"},{"name":"N-Acetyl-D-glucosamine permease","type":"related"},{"name":"N-acetyl-D-glucosamine transmembrane transporter activity","type":"exact"},{"name":"N-acetylchitosamine transmembrane transporter activity","type":"exact"},{"name":"N-acetylglucosamine permease activity","type":"related"}],"termid":"GO:0015572"}


id: PBO:0005456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sir2 family histone deacetylase Hst2","termid":"PBO:0005456"}


id: GO:0000247
data:
  {"annotated_genes":["SJAG_03598"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88646],"is_not":false,"summary":null,"term":"GO:0000247"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: fecosterol = episterol.","definition_xrefs":["MetaCyc:RXN3O-203","PMID:8988026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03598":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"C-8 sterol isomerase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:33435"],"synonyms":[{"name":"delta-8-delta-7 sterol isomerase activity","type":"exact"}],"termid":"GO:0000247","terms_by_termid":{"GO:0000247":null}}


id: GO:0030169
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a low-density lipoprotein particle, a lipoprotein particle that is rich in cholesterol esters and low in triglycerides, is typically composed of APOB100 and APOE, and has a density of 1.02-1.06 g/ml and a diameter of between 20-25 nm.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein particle binding","termid":"GO:0071813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"low-density lipoprotein particle binding","synonyms":[{"name":"LDL binding","type":"exact"}],"termid":"GO:0030169"}


id: PBO:0029037
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_cell_surface","termid":"PBO:0029037"}


id: PBO:0058298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4672","termid":"PBO:0058298"}


id: PBO:0076935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trefoil factor 3","termid":"PBO:0076935"}


id: GO:0098699
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a presynaptic actin cytoskeleton.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of cytoskeleton","termid":"GO:0005200"},{"relation_name":"is_a","term_name":"structural constituent of presynapse","termid":"GO:0099181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of presynaptic actin cytoskeleton","termid":"GO:0098699"}


id: PBO:0083916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Formin; polarisome component; nucleates the formation of linear actin filaments, involved in cell processes such as budding and mitotic spindle orientation which require the formation of polarized actin cables; recruited to the division site in a Glc7p/Ref2p dependent manner following release of Bnr1p; functionally redundant with BNR1","termid":"PBO:0083916"}


id: PBO:0069219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 474, pseudogene","termid":"PBO:0069219"}


id: PBO:0061309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephrocystin 1","termid":"PBO:0061309"}


id: GO:0030987
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a high molecular weight kininogen receptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"high molecular weight kininogen receptor binding","termid":"GO:0030987"}


id: PBO:0088112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar aminopeptidase yscI; zinc metalloproteinase that belongs to the peptidase family M18; often used as a marker protein in studies of autophagy and cytosol to vacuole targeting (CVT) pathway; protein increases in abundance and relative distribution to cytoplasmic foci increases upon DNA replication stress","termid":"PBO:0088112"}


id: GO:2000291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of myoblast proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"myoblast proliferation","termid":"GO:0051450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myoblast proliferation","termid":"GO:2000291"}


id: PBO:0055723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lamin B2","termid":"PBO:0055723"}


id: FYPO:0000079
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115581,115596],"is_not":false,"summary":null,"term":"FYPO:0000079"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to caspofungin. Cells stop growing (and may die) at a concentration of caspofungin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to echinocandin","termid":"FYPO:0007947"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_04551":null},"genotype_count":2,"genotypes_by_uniquename":{"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to caspofungin","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_04551","SJAG_00610"],"single_locus_genotype_uniquenames":["pck2delta","pmk1delta"],"synonyms":[{"name":"hypersensitive to caspofungin","type":"exact"},{"name":"sensitive to caspofungin during mitotic cell cycle","type":"related"},{"name":"sensitive to caspofungin during vegetative growth","type":"exact"},{"name":"sensitive to glucan synthase inhibitor","type":"broad"}],"termid":"FYPO:0000079","terms_by_termid":{"FYPO:0000079":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: FYECO:0000054
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in minimal medium where glycerol is the sole carbon source (i.e. NO addition of glucose/ethanol etc at all).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol MM","secondary_identifiers":["FYECO:0000077"],"synonyms":[{"name":"glycerol minimal medium","type":"exact"}],"termid":"FYECO:0000054"}


id: PATO:0000797
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000797 urination value (obsolete PATO:0000797)","termid":"PATO:0000797"}


id: PBO:0002621
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.1.17","termid":"PBO:0002621"}


id: PBO:0043162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell death inducing DFFA like effector b","termid":"PBO:0043162"}


id: GO:0106039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process carried out at the cellular level, which is the final step in vesicle assembly. Vesicle fusion occurs when a newly assembled vesicle closes up, following vesicle vesicle scission (GO:0099050).","definition_xrefs":["GOC:bc","PMID:25898166","GOC:aruk"],"gene_count":0,"genotype_count":0,"name":"obsolete vesicle fusion involved in vesicle assembly (obsolete GO:0106039)","termid":"GO:0106039"}


id: GO:0047348
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sn-glycerol 3-phosphate + CTP = CDP-glycerol + diphosphate.","definition_xrefs":["EC:2.7.7.39","RHEA:13361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016779","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"glycerol-3-phosphate cytidylyltransferase activity","secondary_identifiers":["MetaCyc:2.7.7.39-RXN","KEGG_REACTION:R00856"],"synonyms":[{"name":"CDP-glycerol diphosphorylase activity","type":"related"},{"name":"CDP-glycerol pyrophosphorylase activity","type":"related"},{"name":"CTP:glycerol 3-phosphate cytidylyltransferase activity","type":"related"},{"name":"CTP:glycerol-3-phosphate cytidylyltransferase activity","type":"exact"},{"name":"CTP:sn-glycerol-3-phosphate cytidylyltransferase activity","type":"related"},{"name":"Gro-PCT","type":"related"},{"name":"cytidine diphosphate glycerol pyrophosphorylase activity","type":"related"},{"name":"cytidine diphosphoglycerol pyrophosphorylase activity","type":"related"}],"termid":"GO:0047348"}


id: GO:0036432
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + undecaprenol + all-trans-undecaprenyl phosphate + ADP + H+.","definition_xrefs":["RHEA:23752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undecaprenol kinase activity","termid":"GO:0009038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"all-trans undecaprenol kinase activity","termid":"GO:0036432"}


id: PBO:0081925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 965, pseudogene","termid":"PBO:0081925"}


id: PBO:0034731
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dyskeratosis congenita","termid":"PBO:0034731"}


id: PBO:0050010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexokinase 2 pseudogene 1","termid":"PBO:0050010"}


id: PBO:0091852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cis-acting lincRNA Ste11 repressor","termid":"PBO:0091852"}


id: GO:0100058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates phenotypic switching.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phenotypic switching by transcription from RNA polymerase II promoter (obsolete GO:0100058)","termid":"GO:0100058"}


id: GO:0035825
data:
  {"annotated_genes":["SJAG_04748","SJAG_03221","SJAG_07002","SJAG_02460","SJAG_00935","SJAG_00727","SJAG_01708","SJAG_02556","SJAG_04816","SJAG_03751","SJAG_01044","SJAG_03048","SJAG_01138","SJAG_03720","SJAG_04950","SJAG_02339","SJAG_00377","SJAG_05295","SJAG_01677","SJAG_01601","SJAG_01419","SJAG_02490","SJAG_03219","SJAG_00266","SJAG_00908","SJAG_02652","SJAG_02465","SJAG_00757","SJAG_02616","SJAG_00247","SJAG_00172","SJAG_02724","SJAG_04303","SJAG_02226","SJAG_05239","SJAG_01410","SJAG_02181","SJAG_01495","SJAG_00623","SJAG_04205","SJAG_02267","SJAG_02079","SJAG_03567","SJAG_00100","SJAG_02592","SJAG_05373","SJAG_02828","SJAG_03438","SJAG_01156","SJAG_01076","SJAG_02708","SJAG_02311","SJAG_02822","SJAG_00980","SJAG_03525","SJAG_02294","SJAG_03097","SJAG_05333"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100479],"is_not":false,"summary":null,"term":"GO:0035825"},{"annotations":[104020],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0010846"},{"annotations":[112875,95118,84610,103716,85227],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990918"},{"annotations":[112878,102111,95183,85230,85357,96638,93491,92236,104566,111085,106877,114822,102677,84003,106353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007534"},{"annotations":[105699,86399,100919,104799,107183],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010780"},{"annotations":[103718,106355],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010772"},{"annotations":[85358,96604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006311"},{"annotations":[84551,92985,106356,97578,103719,88930,96605,113174],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000709"},{"annotations":[84552,96606,88931],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010774"},{"annotations":[104023],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045128"},{"annotations":[98440,104408],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905263"},{"annotations":[85126],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0010845"},{"annotations":[88801,103722,99933,113178,88724,86351,92986,85359,87523,85127,104026,96608,100390,100920,96641,97580,96705,89296,107184,90804,100892,114826,84617,102772,97201,86863,111605,86400,85663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007131"},{"annotations":[90436,112359,85234],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010520"},{"annotations":[102239,114827,104204,97582,106379,113180,113369,105138,113520],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000712"},{"annotations":[112308],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0062209"}]},"cv_name":"biological_process","definition":"A DNA recombination process that results in the exchange of an equal amount of genetic material between highly homologous DNA molecules.","definition_xrefs":["PMID:11139492","GOC:mah","PMID:17304215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA 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recombination","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Chromosomal_crossover"],"synonyms":[{"name":"chromosomal crossover","type":"related"},{"name":"interchromosomal DNA recombination","type":"exact"},{"name":"interstrand DNA recombination","type":"exact"},{"name":"reciprocal DNA recombination","type":"narrow"}],"termid":"GO:0035825","terms_by_termid":{"GO:0000709":null,"GO:0000712":null,"GO:0006311":null,"GO:0007131":null,"GO:0007534":null,"GO:0010520":null,"GO:0010772":null,"GO:0010774":null,"GO:0010780":null,"GO:0010845":null,"GO:0010846":null,"GO:0035825":null,"GO:0045128":null,"GO:0062209":null,"GO:1905263":null,"GO:1990918":null}}


id: PBO:0016985
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"co-expression of nus1 and rer2 functionally complements a triple deletion of NUS1, RER2 and SRT1 in S. cerevisiae","termid":"PBO:0016985"}


id: PBO:0044332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 14","termid":"PBO:0044332"}


id: PBO:0087696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the origin recognition complex (ORC); ORC directs DNA replication by binding to replication origins and is also involved in transcriptional silencing; interacts with Spp1p and with trimethylated histone H3; phosphorylated by Cdc28p","termid":"PBO:0087696"}


id: PBO:0004202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phosphosphingolipid phospholipase C, Css1","termid":"PBO:0004202"}


id: PBO:0031586
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondrial_translation_phenotype","termid":"PBO:0031586"}


id: PBO:0089683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Armadillo-type fold protein, DUF1941 family protein","termid":"PBO:0089683"}


id: GO:0048210
data:
  {"annotated_genes":["SJAG_03889"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92009],"is_not":false,"summary":null,"term":"GO:0048210"}]},"cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around a Golgi transport vesicle to the target lipid bilayer membrane.","definition_xrefs":["ISBN:0716731363","PMID:10219233","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"part_of","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03889":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"Golgi vesicle fusion to target membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Golgi-derived vesicle fusion to target membrane","type":"exact"},{"name":"dictyosome vesicle fusion to target membrane","type":"narrow"}],"termid":"GO:0048210","terms_by_termid":{"GO:0048210":null}}


id: GO:1901557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fenofibrate stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to fenofibrate","termid":"GO:1901557"}


id: PBO:0000751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (cytosine-5-)-methyltransferase (predicted)","termid":"PBO:0000751"}


id: GO:0044518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that activates or increases the frequency, rate or extent of the activity of a vasoactive intestinal polypeptide receptor in a second organism.","definition_xrefs":["GOC:fj","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of vasoactive intestinal polypeptide receptor activity in another organism (obsolete GO:0044518)","synonyms":[{"name":"positive regulation of VIP receptor activity in other organism","type":"exact"},{"name":"positive regulation of vasoactive intestinal polypeptide receptor activity in other organism","type":"exact"}],"termid":"GO:0044518"}


id: GO:0097686
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A horn-shaped dinoflagellate apex found in thecate species.","definition_xrefs":["GOC:at","PMID:7002229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dinoflagellate apex","termid":"GO:0097683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dinoflagellate apical horn","termid":"GO:0097686"}


id: PR:O59716
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3B8.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3B8.8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B8.08","synonyms":[{"name":"Spom972h-SPBC3B8.08","type":"exact"}],"termid":"PR:O59716"}


id: GO:0046020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involving pheromones that stops, prevents or reduces the rate of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter by pheromones (obsolete GO:0046020)","synonyms":[{"name":"down regulation of transcription from RNA polymerase II promoter by pheromones","type":"exact"},{"name":"down-regulation of transcription from RNA polymerase II promoter by pheromones","type":"exact"},{"name":"downregulation of transcription from RNA polymerase II promoter by pheromones","type":"exact"},{"name":"inhibition of transcription from RNA polymerase II promoter by pheromones","type":"narrow"},{"name":"negative regulation of transcription from Pol II promoter by pheromones","type":"exact"}],"termid":"GO:0046020"}


id: PBO:0087035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L17A; required for processing of 27SB pre-rRNA and formation of stable 66S assembly intermediates; copurifies with the Dam1 complex (aka DASH complex); homologous to mammalian ribosomal protein L17 and bacterial L22; RPL17A has a paralog, RPL17B, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0087035"}


id: PBO:0063720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyroglutamyl-peptidase I like","termid":"PBO:0063720"}


id: GO:0048159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stage in oogenesis when the oocyte has a nucleus slightly larger than those of the adjacent cells and is surrounded by a layer of loose squamous epithelial cells.","definition_xrefs":["GOC:jid","GOC:mtg_sensu","ISBN:0198542771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammalian oogenesis stage","termid":"GO:0022605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary oocyte stage","synonyms":[{"name":"mammalian oogenesis stage 2","type":"exact"}],"termid":"GO:0048159"}


id: PBO:0067925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 227","termid":"PBO:0067925"}


id: PBO:0043919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cornulin","termid":"PBO:0043919"}


id: GO:0044539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a long-chain fatty acid from outside of a cell into a cell. This may occur via transport across the plasma membrane or via endocytosis. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["PMID:22022213","GOC:jl","GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid transport","termid":"GO:0015909"},{"relation_name":"is_a","term_name":"import into cell","termid":"GO:0098657"},{"relation_name":"is_a","term_name":"lipid import into cell","termid":"GO:0140354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"long-chain fatty acid import into cell","synonyms":[{"name":"long-chain fatty acid import","type":"related"},{"name":"long-chain fatty acid uptake","type":"exact"}],"termid":"GO:0044539"}


id: PBO:0073925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 16 member 13","termid":"PBO:0073925"}


id: GO:0021509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a single row of glia at the dorsal midline of the developing neural tube. This region provides inductive signals for the specification of neuronal cell types and of the specification of neural crest cells. The cells comprising the roof plate are the precursors to radial glial cells.","definition_xrefs":["GOC:dph","GOC:cls","PMID:15936325","GO_REF:0000021","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"neural tube formation","termid":"GO:0001841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"roof plate formation","termid":"GO:0021509"}


id: PBO:0082072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-phosphoglycerate kinase; catalyzes transfer of high-energy phosphoryl groups from the acyl phosphate of 1,3-bisphosphoglycerate to ADP to produce ATP; key enzyme in glycolysis and gluconeogenesis","termid":"PBO:0082072"}


id: PBO:0000977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3j (p35)","termid":"PBO:0000977"}


id: PBO:0085673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in phospholipid flippase function; null allele suppresses growth and membrane trafficking defects associated with all flippase null alleles; proposed function as a phospholipid scramblase that reduces membrane asymmetry; PQ loop family member; localizes to the endosome and trans-Golgi network; non-essential gene","termid":"PBO:0085673"}


id: GO:0099638
data:
  {"annotated_genes":["SJAG_02912","SJAG_02282","SJAG_02177","SJAG_03756","SJAG_03915","SJAG_00379","SJAG_01809","SJAG_04609","SJAG_04565"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87343,88331,90951,97187,103421,108844,109069,114560,114945],"is_not":false,"summary":null,"term":"GO:0099638"}]},"cv_name":"biological_process","definition":"The directed movement of proteins from the endosome to the plasma membrane in transport vesicles.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"is_a","term_name":"endocytic recycling","termid":"GO:0032456"},{"relation_name":"is_a","term_name":"establishment of protein localization to plasma membrane","termid":"GO:0061951"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00379":null,"SJAG_01809":null,"SJAG_02177":null,"SJAG_02282":null,"SJAG_02912":null,"SJAG_03756":null,"SJAG_03915":null,"SJAG_04565":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"endosome to plasma membrane protein transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099638","terms_by_termid":{"GO:0099638":null}}


id: PBO:0074042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 25","termid":"PBO:0074042"}


id: PBO:0051772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol 1,3,4,5,6-pentakisphosphate 2-kinase pseudogene 1","termid":"PBO:0051772"}


id: GO:0000405
data:
  {"annotated_genes":["SJAG_04933","SJAG_01076","SJAG_04671","SJAG_02200"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89719,95425,107541,112884],"is_not":false,"summary":null,"term":"GO:0000405"}]},"cv_name":"molecular_function","definition":"Binding to DNA segment that contains a bubble. A bubble occurs when DNA contains a region of unpaired, single-stranded DNA flanked on both sides by regions of paired, double-stranded DNA.","definition_xrefs":["GOC:elh","GOC:vw","PMID:16781730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA secondary structure binding","termid":"GO:0000217"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01076":null,"SJAG_02200":null,"SJAG_04671":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"bubble DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000405","terms_by_termid":{"GO:0000405":null}}


id: PATO:0001175
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001175 urine composition (obsolete PATO:0001175)","termid":"PATO:0001175"}


id: PBO:0076345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 12","termid":"PBO:0076345"}


id: GO:0033479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving UDP-D-galacturonate, a substance composed of galacturonic acid in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"},{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"UDP-D-galacturonate metabolic process","synonyms":[{"name":"UDP-D-galacturonate metabolism","type":"exact"}],"termid":"GO:0033479"}


id: GO:0042017
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-22.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"interleukin-22 binding","synonyms":[{"name":"IL-22 binding","type":"exact"}],"termid":"GO:0042017"}


id: PBO:0029349
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_tRNA_level","termid":"PBO:0029349"}


id: PR:Q4ZGE2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3D6.16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q4ZGE2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3D6.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.16","synonyms":[{"name":"Spom972h-SPBC3D6.16","type":"exact"}],"termid":"PR:Q4ZGE2"}


id: PBO:0038787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine deaminase","termid":"PBO:0038787"}


id: GO:0005648
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete importin, beta-subunit (obsolete GO:0005648)","synonyms":[{"name":"importin, beta-subunit","type":"exact"},{"name":"karyopherin-beta1","type":"exact"}],"termid":"GO:0005648"}


id: GO:0018260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of phospho-guanosine to a protein amino acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein nucleotidylation","termid":"GO:0018175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein guanylylation","synonyms":[{"name":"protein amino acid guanylylation","type":"exact"}],"termid":"GO:0018260"}


id: PBO:0062901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidoreductase NAD binding domain containing 1","termid":"PBO:0062901"}


id: GO:0062052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sequence of events that initiates (or primes) the synthesis of semi-crystalline starch granules within photosynthetic chloroplasts or non-photosynthetic amyloplasts.","definition_xrefs":["PMID:28684429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"starch biosynthetic process","termid":"GO:0019252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"starch granule initiation","termid":"GO:0062052"}


id: PBO:0068070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 375","termid":"PBO:0068070"}


id: GO:0140902
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: L-glutamine(out) + Na+(out) = L-glutamine(in) + Na+(in).","definition_xrefs":["PMID:28416685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral L-amino acid:sodium symporter activity","termid":"GO:0005295"},{"relation_name":"is_a","term_name":"L-glutamine transmembrane transporter activity","termid":"GO:0015186"},{"relation_name":"is_a","term_name":"alanine:sodium symporter activity","termid":"GO:0015655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"L-glutamine:sodium symporter activity","secondary_identifiers":["TC:2.A.18.6.13"],"synonyms":[{"name":"glutamine:sodium symporter activity","type":"exact"},{"name":"sodium:L-glutamine symporter activity","type":"exact"},{"name":"sodium:glutamine symporter activity","type":"exact"}],"termid":"GO:0140902"}


id: PBO:0086795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YBL044W is not an essential protein","termid":"PBO:0086795"}


id: PBO:0077953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 11-1","termid":"PBO:0077953"}


id: PBO:0029106
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_proline_level","termid":"PBO:0029106"}


id: GO:0086096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An adenylate cyclase-inhibiting adrenergic receptor signaling pathway which contributes to a circulatory system process carried out by the heart.","definition_xrefs":["GOC:BHF","PMID:10571541","GOC:mtg_cardiac_conduct_nov11"],"gene_count":0,"genotype_count":0,"name":"obsolete adenylate cyclase-inhibiting adrenergic receptor signaling pathway involved in heart process (obsolete GO:0086096)","synonyms":[{"name":"G-inhibitory-coupled Beta2AR signaling pathway involved in heart process","type":"exact"},{"name":"Gi-coupled Beta2-AR signaling pathway involved in heart process","type":"exact"},{"name":"Gi-coupled adrenergic receptor signaling pathway involved in heart process","type":"exact"},{"name":"cardiac adrenergic receptor signaling pathway via inhibition of adenylate cyclase activity","type":"exact"}],"termid":"GO:0086096"}


id: GO:0075299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of frequency, rate or extent of zygospore formation, a process in which a thick-walled spore of some algae and fungi is formed by union of two similar sexual cells, usually serves as a resting spore, and produces the sporophytic phase.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043941"},{"relation_name":"is_a","term_name":"regulation of zygospore formation","termid":"GO:0075298"},{"relation_name":"positively_regulates","term_name":"zygospore formation","termid":"GO:0034296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of zygospore formation","termid":"GO:0075299"}


id: PBO:0067216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 283, pseudogene","termid":"PBO:0067216"}


id: FYPO:0007840
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide alpha-N-acetyltransferase activity is increased.","definition_xrefs":["PomBase:mah","PMID:34019809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal peptide alpha-N-acetyltransferase activity","termid":"FYPO:0007839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"increased peptide alpha-N-acetyltransferase activity","synonyms":[{"name":"increased NAT activity","type":"related"},{"name":"increased protein N-terminal acetyltransferase activity","type":"exact"}],"termid":"FYPO:0007840"}


id: GO:1902261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of delayed rectifier potassium channel activity.","definition_xrefs":["GOC:TermGenie","PMID:11299204","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of delayed rectifier potassium channel activity","termid":"GO:1902259"},{"relation_name":"is_a","term_name":"positive regulation of voltage-gated potassium channel activity","termid":"GO:1903818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of delayed rectifier potassium channel activity","synonyms":[{"name":"activation of delayed rectifier potassium channel activity","type":"narrow"},{"name":"up regulation of delayed rectifier potassium channel activity","type":"exact"},{"name":"up-regulation of delayed rectifier potassium channel activity","type":"exact"},{"name":"upregulation of delayed rectifier potassium channel activity","type":"exact"}],"termid":"GO:1902261"}


id: PBO:0036483
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARGinine requiring","termid":"PBO:0036483"}


id: SO:0001307
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_methyl_N6_threonylcarbamoyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_methyl_N6_threonylcarbamoyladenosine","secondary_identifiers":["RNAMOD:013"],"synonyms":[{"name":"N6 methyl N6 threonylcarbamoyladenosine","type":"exact"},{"name":"N6-methyl-N6-threonylcarbamoyladenosine","type":"exact"},{"name":"m6t6A","type":"exact"}],"termid":"SO:0001307"}


id: GO:0034366
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A mature high-density lipoprotein (HDL) particle, converted from discoidal HDL particles following the esterification of cholesterol in the particle by phosphatidylcholine-sterol O-acyltransferase (lecithin cholesterol acyltransferase; LCAT).","definition_xrefs":["GOC:BHF","GOC:expert_pt","GOC:mah","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"high-density lipoprotein particle","termid":"GO:0034364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005576"],"is_obsolete":false,"name":"spherical high-density lipoprotein particle","synonyms":[{"name":"mature HDL","type":"exact"},{"name":"mature high-density lipoprotein particle","type":"exact"},{"name":"spherical HDL","type":"exact"}],"termid":"GO:0034366"}


id: GO:0034910
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 6-hydroxy-3-succinoylpyridine + H2O = succinic semialdehyde + 2,5-dihydroxypyridine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 6-hydroxy-3-succinoylpyridine hydrolase activity (obsolete GO:0034910)","termid":"GO:0034910"}


id: PBO:0027571
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nuclear_pore_distribution_during_mitotic_interphase","termid":"PBO:0027571"}


id: PBO:0090414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III complex subunit Rpc37","termid":"PBO:0090414"}


id: GO:0006307
data:
  {"annotated_genes":["SJAG_01971","SJAG_03106","SJAG_05257"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73527,97632,99676],"is_not":false,"summary":null,"term":"GO:0006307"}]},"cv_name":"biological_process","definition":"The repair of alkylation damage in DNA, e.g. the removal of a non-physiological alkyl group from a nucleobase. This is usually mediated by DNA alkyltransferases.","definition_xrefs":["PMID:10946226","PMID:35543797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair","termid":"GO:0006281"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01971":null,"SJAG_03106":null,"SJAG_05257":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"DNA alkylation repair","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA dealkylation involved in DNA repair","type":"related"}],"termid":"GO:0006307","terms_by_termid":{"GO:0006307":null}}


id: PBO:0080170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 5","termid":"PBO:0080170"}


id: PBO:0110374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSPBAP1 pseudogene 1","termid":"PBO:0110374"}


id: GO:0047492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: xanthan = oligosaccharide with 4-deoxy-alpha-L-threo-hex-4-enuronosyl end + pyruvylate mannose. This reaction is the eliminative cleavage of the terminal beta-D-mannosyl-beta-D-1,4-glucuronosyl linkage of the side-chain of the polysaccharide xanthan, leaving a 4-deoxy-alpha-L-threo-hex-4-enuronosyl group at the terminus of the side-chain.","definition_xrefs":["EC:4.2.2.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"xanthan lyase activity","secondary_identifiers":["MetaCyc:4.2.2.12-RXN"],"termid":"GO:0047492"}


id: PBO:0051824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IRF2 divergent transcript","termid":"PBO:0051824"}


id: PBO:0082629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of CORVET membrane tethering complex; vacuolar peripheral membrane protein that promotes vesicular docking/fusion reactions in conjunction with SNARE proteins, required for vacuolar biogenesis","termid":"PBO:0082629"}


id: GO:0098949
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic endosome membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of postsynaptic endosome membrane (obsolete GO:0098949)","synonyms":[{"name":"intrinsic to postsynaptic endosome membrane","type":"narrow"}],"termid":"GO:0098949"}


id: FYPO:0005880
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form microtubules that are longer than normal and are curved, i.e. follow a smooth bend rather than a straight line, and extend around one or both ends of the cell, during interphase of the mitotic cell cycle.","definition_xrefs":["PMID:14663827","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long curved interphase microtubules","termid":"FYPO:0004511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000054","FYPO:0005447","FYPO:0002399"],"is_obsolete":false,"name":"long interphase microtubules curved around cell end","synonyms":[{"name":"elongated interphase microtubules curved around cell end","type":"exact"},{"name":"long cytoplasmic microtubules curved around cell end during interphase of mitotic cell cycle","type":"exact"},{"name":"long cytoplasmic microtubules curved around cell end during mitotic interphase","type":"exact"},{"name":"long interphase cytoplasmic microtubules curved around cell end","type":"exact"},{"name":"long interphase microtubules curved around cell end during vegetative growth","type":"exact"},{"name":"long interphase microtubules curved around cell tip","type":"exact"}],"termid":"FYPO:0005880"}


id: PBO:0054457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1854","termid":"PBO:0054457"}


id: GO:0034883
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: isonicotinate + 2 H+ + 2 e- = 1,4-dihydroisonicotinate.","definition_xrefs":["UM-BBD_reactionID:r1347"],"gene_count":0,"genotype_count":0,"name":"obsolete isonicotinate reductase activity (obsolete GO:0034883)","synonyms":[{"name":"isonicotinate reductase activity","type":"exact"}],"termid":"GO:0034883"}


id: PBO:0114349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane amino acid transmembrane transporter Meu22","termid":"PBO:0114349"}


id: GO:0061999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac endothelial to mesenchymal transition.","definition_xrefs":["PMID:26857067","GOC:BHF_miRNA","GOC:rph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"cardiac endothelial to mesenchymal transition","termid":"GO:0140074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac endothelial to mesenchymal transition","termid":"GO:0061999"}


id: GO:0019148
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-cysteine + H2O = sulfide + NH3 + pyruvate.","definition_xrefs":["EC:4.4.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"D-cysteine desulfhydrase activity","secondary_identifiers":["MetaCyc:DCYSDESULF-RXN","RHEA:11268"],"synonyms":[{"name":"D-cysteine lyase activity","type":"related"},{"name":"D-cysteine sulfide-lyase (deaminating)","type":"related"},{"name":"D-cysteine sulfide-lyase (deaminating; pyruvate-forming)","type":"related"}],"termid":"GO:0019148"}


id: PBO:0068924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 167, pseudogene","termid":"PBO:0068924"}


id: GO:0045707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of salivary gland determination in an adult organism.","definition_xrefs":["GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of salivary gland boundary specification","termid":"GO:0045704"},{"relation_name":"regulates","term_name":"adult salivary gland boundary specification","termid":"GO:0007434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of adult salivary gland boundary specification","synonyms":[{"name":"regulation of adult salivary gland determination","type":"exact"}],"termid":"GO:0045707"}


id: GO:1902500
data:
  {"annotated_genes":["SJAG_00204","SJAG_00380","SJAG_03005","SJAG_01772","SJAG_05194","SJAG_05184","SJAG_04966","SJAG_01598"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85783,86239,90373,96311,96369,97173,100685,114489],"is_not":false,"summary":null,"term":"GO:1902500"}]},"cv_name":"cellular_component","definition":"Any HOPS complex that is part of a vacuolar membrane.","definition_xrefs":["GOC:TermGenie","PMID:23645161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"HOPS complex","termid":"GO:0030897"},{"relation_name":"part_of","term_name":"vacuolar membrane","termid":"GO:0005774"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00204":null,"SJAG_00380":null,"SJAG_01598":null,"SJAG_01772":null,"SJAG_03005":null,"SJAG_04966":null,"SJAG_05184":null,"SJAG_05194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005575","GO:0005773","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"vacuolar HOPS complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"vacuolar membrane HOPS complex","type":"exact"}],"termid":"GO:1902500","terms_by_termid":{"GO:1902500":null}}


id: GO:0000444
data:
  {"annotated_genes":["SJAG_00418","SJAG_02346","SJAG_03220","SJAG_01228"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91620,95325,106363,106407],"is_not":false,"summary":null,"term":"GO:0000444"}]},"cv_name":"cellular_component","definition":"A multiprotein kinetochore subcomplex that binds to centromeric chromatin and forms part of the outer kinetochore. It helps to recruit outer kinetochore subunits that will bind to microtubules. In humans, it consists of MIS12, DSN1, NSL1 and PMF1.","definition_xrefs":["PMID:14633972","PMID:16585270","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"outer kinetochore","termid":"GO:0000940"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00418":null,"SJAG_01228":null,"SJAG_02346":null,"SJAG_03220":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0000776"}],"interesting_parent_ids":["GO:0005694","GO:0000776","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"MIS12/MIND type complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000818"],"synonyms":[{"name":"MIND complex","type":"exact"},{"name":"Mis12 complex","type":"narrow"},{"name":"Mtw1p Including Nnf1p-Nsl1p-Dsn1p complex","type":"related"},{"name":"nuclear MIS12/MIND complex","type":"related"}],"termid":"GO:0000444","terms_by_termid":{"GO:0000444":null}}


id: PBO:0087407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase; polyubiquitin binding protein that assists in the dislocation of misfolded, ERAD substrates that are subsequently delivered to the proteasome for degradation; involved in regulated destruction of ER membrane proteins such as HMG-CoA reductase (Hmg1/2p) and cytoplasmic proteins (Fbp1p); involved in mobilizing membrane bound transcription factors by regulated Ub/proteasome-dependent processing (RUP)","termid":"PBO:0087407"}


id: GO:0075169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its protein kinase-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of symbiont protein kinase-mediated signal transduction in response to host (obsolete GO:0075169)","termid":"GO:0075169"}


id: PBO:0027051
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-enlarged_post-anaphase_array_with_increased_number_of_microtubules","termid":"PBO:0027051"}


id: FYPO:0002166
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which polynucleotide 3'-phosphatase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal polynucleotide 3'-phosphatase activity","termid":"FYPO:0002165"},{"relation_name":"is_a","term_name":"abolished phosphatase activity","termid":"FYPO:0004303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"abolished polynucleotide 3'-phosphatase activity","synonyms":[{"name":"polynucleotide 3'-phosphatase activity abolished","type":"exact"}],"termid":"FYPO:0002166"}


id: GO:0035345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of hypoxanthine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound transport","termid":"GO:0032239"},{"relation_name":"regulates","term_name":"hypoxanthine transport","termid":"GO:0035344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of hypoxanthine transport","synonyms":[{"name":"regulation of 6-hydroxypurine transport","type":"exact"}],"termid":"GO:0035345"}


id: PBO:0045283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 34","termid":"PBO:0045283"}


id: PBO:0013105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA processing factor","termid":"PBO:0013105"}


id: GO:1990083
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that inactivates the function of DnaA by inhibiting the phosphorylation of DnaA-ADP to DnaA-ATP and thereby preventing multiple events of replication initiation. In E. coli, this complex is composed of DnaA and Hda.","definition_xrefs":["PMID:21708944","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replication inhibiting complex","termid":"GO:1990078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"DnaA-Hda complex","termid":"GO:1990083"}


id: GO:0071754
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A polymer of five or six IgM core units each composed of two identical immunoglobulin heavy chains of the IgM isotype and two identical immunoglobulin light chains, held together by disulfide bonds; the individual IgM core units are held together via disulfide bonds with a single J chain polypeptide acting as a bridge between two of the polymeric units. Circulating IgM is present in the extracellular space, in mucosal areas or other tissues, or in the blood or lymph.","definition_xrefs":["GOC:add","ISBN:0781765196","PMID:20176268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex, circulating","termid":"GO:0042571"},{"relation_name":"is_a","term_name":"IgM immunoglobulin complex","termid":"GO:0071753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005576","GO:0005575"],"is_obsolete":false,"name":"IgM immunoglobulin complex, circulating","synonyms":[{"name":"IgM antibody","type":"exact"}],"termid":"GO:0071754"}


id: GO:0060037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pharyngeal system over time, from its formation to the mature structure. The pharyngeal system is a transient embryonic complex that is specific to vertebrates. It comprises the pharyngeal arches, bulges of tissues of mesoderm and neural crest derivation through which pass nerves and pharyngeal arch arteries. The arches are separated internally by pharyngeal pouches, evaginations of foregut endoderm, and externally by pharyngeal clefts, invaginations of surface ectoderm. The development of the system ends when the structure it contributes to are forming: the thymus, thyroid, parathyroids, maxilla, mandible, aortic arch, cardiac outflow tract, external and middle ear.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"},{"relation_name":"part_of","term_name":"chordate embryonic development","termid":"GO:0043009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pharyngeal system development","termid":"GO:0060037"}


id: PBO:0049499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 6","termid":"PBO:0049499"}


id: GO:0044542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont initiates, promotes, or enhances the normal activation of plasminogen, the pathway resulting in the processing of inactive plasminogen to active plasmin in the host organism. This can facilitate the dissemination of the symbiont into host tissues. It can also be used to destroy complement, opsonins as well as antibacterial proteins like histones.","definition_xrefs":["PMID:18070889","PMID:34305859","PMID:27533300"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"},{"relation_name":"is_a","term_name":"zymogen activation in another organism","termid":"GO:0044541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"symbiont-mediated activation of host plasminogen","synonyms":[{"name":"plasminogen activation in another organism","type":"broad"},{"name":"plasminogen activation in other organism","type":"broad"}],"termid":"GO:0044542"}


id: GO:0102158
data:
  {"annotated_genes":["SJAG_01300"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101930],"is_not":false,"summary":null,"term":"GO:0102158"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a very-long-chain (3R)-3-hydroxyacyl-CoA = H2O + a very-long-chain (2E)-enoyl-CoA. This reaction is the third (dehydration) step of the four-step fatty acid elongation cycle in the endoplasmic reticulum that extends fatty acids of C-16 or longer with an additional 2-C unit.","definition_xrefs":["PMID:19763486","RHEA:45812","PMID:16564093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-hydroxyacyl-CoA dehydratase activity","termid":"GO:0018812"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01300":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:4.2.1.134","MetaCyc:RXN-11750"],"synonyms":[{"name":"very-long-chain 3-hydroxyacyl-CoA dehydratase activity","type":"exact"}],"termid":"GO:0102158","terms_by_termid":{"GO:0102158":null}}


id: GO:1903838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mRNA 3'-UTR binding.","definition_xrefs":["GO_REF:0000059","GOC:als","PMID:19575011","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA 3'-UTR binding","termid":"GO:1903837"},{"relation_name":"is_a","term_name":"negative regulation of mRNA binding","termid":"GO:1904572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mRNA 3'-UTR binding","synonyms":[{"name":"down regulation of mRNA 3' UTR binding","type":"exact"},{"name":"down regulation of mRNA 3'-UTR binding","type":"exact"},{"name":"down-regulation of mRNA 3' UTR binding","type":"exact"},{"name":"down-regulation of mRNA 3'-UTR binding","type":"exact"},{"name":"downregulation of mRNA 3' UTR binding","type":"exact"},{"name":"downregulation of mRNA 3'-UTR binding","type":"exact"},{"name":"inhibition of mRNA 3' UTR binding","type":"narrow"},{"name":"inhibition of mRNA 3'-UTR binding","type":"narrow"},{"name":"negative regulation of mRNA 3' UTR binding","type":"exact"}],"termid":"GO:1903838"}


id: GO:0061298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the vasculature of the retina over time, from its formation to the mature structure.","definition_xrefs":["GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasculature development","termid":"GO:0001944"},{"relation_name":"part_of","term_name":"retina development in camera-type eye","termid":"GO:0060041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retina vasculature development in camera-type eye","synonyms":[{"name":"retinal vasculature development","type":"exact"}],"termid":"GO:0061298"}


id: GO:0043501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which skeletal muscles change their phenotypic profiles in response to altered functional demands and a variety of signals.","definition_xrefs":["PMID:11181628","GOC:mtg_muscle","PMID:11449884","PMID:12605307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle adaptation","termid":"GO:0014888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle adaptation","synonyms":[{"name":"skeletal muscle plasticity","type":"related"}],"termid":"GO:0043501"}


id: FYPO:0006512
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the telomere is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal telomere morphology","termid":"FYPO:0006512"}


id: FYPO:0008028
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the rate of acid phosphatase activation during phosphate starvation is decreased.","definition_xrefs":["PMID:35012333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of catalytic activity","termid":"FYPO:0004916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased rate of acid phosphatase activation during phosphate starvation","synonyms":[{"name":"decreased acid phosphatase kinetics","type":"exact"}],"termid":"FYPO:0008028"}


id: PBO:0046785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eyes shut homolog","termid":"PBO:0046785"}


id: PR:O13712
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- man1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 61 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.05c","synonyms":[{"name":"Spom972h-man1","type":"exact"}],"termid":"PR:O13712"}


id: PR:O94516
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pex16 gene.","definition_xrefs":["UniProtKB:O94516","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal membrane protein PEX16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC646.15c","synonyms":[{"name":"Spom972h-pex16","type":"exact"},{"name":"peroxin-16 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94516"}


id: MOD:00818
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a residue to a glycosylphosphatidylinositolethanolamidated.","definition_xrefs":["PubMed:12643538","Unimod:394#C-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoconjugated residue","termid":"MOD:00764"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylphosphatidylinositolated residue","synonyms":[{"name":"GPIRes","type":"exact"},{"name":"GPIanchor","type":"related"},{"name":"LIPID GPI-anchor amidated carboxyl end","type":"exact"},{"name":"glycosylphosphatidylinositol","type":"related"}],"termid":"MOD:00818"}


id: PBO:0085313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylethanolamine methyltransferase (PEMT); catalyzes the first step in the conversion of phosphatidylethanolamine to phosphatidylcholine during the methylation pathway of phosphatidylcholine biosynthesis","termid":"PBO:0085313"}


id: PBO:0075270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 23","termid":"PBO:0075270"}


id: GO:0045689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of antipodal cell differentiation.","definition_xrefs":["GOC:mtg_plant","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of antipodal cell differentiation","termid":"GO:0045688"},{"relation_name":"negatively_regulates","term_name":"antipodal cell differentiation","termid":"GO:0009557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of antipodal cell differentiation","synonyms":[{"name":"down regulation of antipodal cell differentiation","type":"exact"},{"name":"down-regulation of antipodal cell differentiation","type":"exact"},{"name":"downregulation of antipodal cell differentiation","type":"exact"},{"name":"inhibition of antipodal cell differentiation","type":"narrow"}],"termid":"GO:0045689"}


id: PBO:0075947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal antigen 3-like 2 (pseudogene)","termid":"PBO:0075947"}


id: GO:0034288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a disaccharide is received and converted into a molecular signal.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of carbohydrate stimulus","termid":"GO:0009730"},{"relation_name":"is_a","term_name":"response to disaccharide","termid":"GO:0034285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of disaccharide stimulus","synonyms":[{"name":"perception of disaccharide stimulus","type":"related"}],"termid":"GO:0034288"}


id: PBO:0029375
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_site_of_double-strand_break","termid":"PBO:0029375"}


id: PBO:0001256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phytochelatin synthetase","termid":"PBO:0001256"}


id: PBO:0005000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease subunit Sen54 (predicted)","termid":"PBO:0005000"}


id: PBO:0086330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with WD-40 repeats involved in rRNA processing; associates with rDNA chromatin in H4-tail-dependent manner; associates with trans-acting ribosome biogenesis factors; similar to beta-transducin superfamily","termid":"PBO:0086330"}


id: PBO:0078432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon TCC) 2-2","termid":"PBO:0078432"}


id: FYPO:0003275
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to nitrite ions. Cells stop growing (and may die) at a concentration of nitrite ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0002683","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to nitrite","synonyms":[{"name":"hypersensitive to nitrite","type":"exact"},{"name":"sensitive to nitrite during mitotic cell cycle","type":"related"},{"name":"sensitive to nitrite during vegetative growth","type":"exact"},{"name":"sensitive to nitrite ions","type":"exact"}],"termid":"FYPO:0003275"}


id: SO:0002261
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"TRIM elements have terminal direct repeat sequences of 100-250 bp in length that flank an internal domain of 100–300 bp. TRIMs lack coding domains and thus do not encode proteins.","definition_xrefs":["PMID:11717436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRIM","synonyms":[{"name":"terminal-repeat retrotransposons in miniature","type":"exact"},{"name":"terminal-repeat_retrotransposons_in_miniature","type":"exact"}],"termid":"SO:0002261"}


id: GO:0044412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of an organism, or the progression of an organism from an initial condition to a later condition, occurring within the cells or tissues of the host organism. This may (but not necessarily) include a filamentous growth form, and also can include secretion of proteases and lipases to break down host tissue. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete growth or development of symbiont in host (obsolete GO:0044412)","synonyms":[{"name":"growth or development of organism within host","type":"exact"},{"name":"growth or development of symbiont in host","type":"exact"},{"name":"growth or development of symbiont within host","type":"exact"},{"name":"invasive growth","type":"broad"}],"termid":"GO:0044412"}


id: GO:0007622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific behavior of an organism that recur with measured regularity.","definition_xrefs":["GOC:jl","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhythmic behavior","synonyms":[{"name":"rhythmic behavioral response to stimulus","type":"exact"},{"name":"rhythmic behaviour","type":"exact"},{"name":"rhythmic behavioural response to stimulus","type":"exact"}],"termid":"GO:0007622"}


id: FYPO:0007665
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable, and contains one nucleus and one septum. The septum divides the cell into two compartments, one of which contains the nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable vegetative cell","termid":"FYPO:0001491"},{"relation_name":"is_a","term_name":"mononucleate monoseptate vegetative cell with anucleate compartment","termid":"FYPO:0007664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000004"],"is_obsolete":false,"name":"viable mononucleate monoseptate vegetative cell with anucleate compartment","synonyms":[{"name":"displaced nucleus with septum","type":"related"},{"name":"viable mononucleate monoseptate cell during vegetative growth","type":"exact"},{"name":"viable mononucleate monoseptate vegetative cell","type":"exact"},{"name":"viable mononucleate monoseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable with septation in the absence of nuclear division","type":"related"},{"name":"viable with septation independent of mitosis","type":"related"},{"name":"viable with septation without nuclear division","type":"related"}],"termid":"FYPO:0007665"}


id: GO:0036045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of a malonyl group (CO-CH2-CO) to peptidyl-lysine to form N6-malonyl-L-lysine.","definition_xrefs":["GOC:sp","PMID:22076378","GOC:jsg","RESID:AA0568","PMID:21908771"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lysine malonylation (obsolete GO:0036045)","synonyms":[{"name":"lysine malonylation","type":"exact"},{"name":"peptidyl-lysine malonylation","type":"exact"}],"termid":"GO:0036045"}


id: GO:0097287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the Q nucleoside precursor 7-cyano-7-deazaguanine, also known as 2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidine-5-carbonitrile or preQo.","definition_xrefs":["PMID:364423","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrile metabolic process","termid":"GO:0050898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"7-cyano-7-deazaguanine metabolic process","synonyms":[{"name":"7-cyano-7-deazaguanine metabolism","type":"exact"}],"termid":"GO:0097287"}


id: PBO:0031736
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mitotic_recombination","termid":"PBO:0031736"}


id: PBO:0027705
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_positive_regulation_of_ATPase_activity","termid":"PBO:0027705"}


id: GO:0097450
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Terminal process of astrocyte abutting non-neuronal surfaces in the brain.","definition_xrefs":["NIF_Subcellular:sao388182739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astrocyte projection","termid":"GO:0097449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"astrocyte end-foot","synonyms":[{"name":"astrocyte endfoot","type":"exact"}],"termid":"GO:0097450"}


id: PBO:0065616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTP4A2 pseudogene 2","termid":"PBO:0065616"}


id: PBO:0081735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 667","termid":"PBO:0081735"}


id: PR:O59680
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome c1, heme protein, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03118","PRO:DNx","PANTHER:PTHR10266:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c1, heme protein, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.18","secondary_identifiers":["UniProtKB:O59680"],"synonyms":[{"name":"Spom972h-CYC1","type":"exact"},{"name":"complex III subunit 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"complex III subunit IV (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"cytochrome b-c1 complex subunit 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"cytochrome c-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquinol-cytochrome-c reductase complex cytochrome c1 subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59680"}


id: GO:0010288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lead ion stimulus.","definition_xrefs":["GOC:tair_curators","PMID:16461380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to lead ion","termid":"GO:0010288"}


id: PBO:0039197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member B","termid":"PBO:0039197"}


id: GO:0016487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the sesquiterpenoid alcohol farnesol, 3,7,11-trimethyl-2,6,10,dodecatrien-1-ol.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid metabolic process","termid":"GO:0006714"},{"relation_name":"is_a","term_name":"polyprenol metabolic process","termid":"GO:0016093"},{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"farnesol metabolic process","synonyms":[{"name":"farnesol metabolism","type":"exact"}],"termid":"GO:0016487"}


id: GO:0042206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of halogenated hydrocarbons, compounds derived from hydrocarbons by replacing one or more hydrogen atoms with halogen atoms.","definition_xrefs":["GOC:krc","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"halogenated hydrocarbon metabolic process","termid":"GO:0042197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"halogenated hydrocarbon catabolic process","synonyms":[{"name":"halogenated hydrocarbon breakdown","type":"exact"},{"name":"halogenated hydrocarbon catabolism","type":"exact"},{"name":"halogenated hydrocarbon degradation","type":"exact"}],"termid":"GO:0042206"}


id: PBO:0066568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid like 1","termid":"PBO:0066568"}


id: GO:0015671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of oxygen (O2) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gas transport","termid":"GO:0015669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"oxygen transport","termid":"GO:0015671"}


id: PBO:0064882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 catalytic subunit beta","termid":"PBO:0064882"}


id: GO:0071586
data:
  {"annotated_genes":["SJAG_03396","SJAG_00730"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85631,93404],"is_not":false,"summary":null,"term":"GO:0071586"}]},"cv_name":"biological_process","definition":"The second process in a series of specific posttranslational modifications to the CAAX box region of CAAX box proteins, in which the last three amino acids of the protein (AAX) are removed by proteolysis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein processing","termid":"GO:0016485"},{"relation_name":"part_of","term_name":"CAAX-box protein maturation","termid":"GO:0080120"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00730":null,"SJAG_03396":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"CAAX-box protein processing","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071586","terms_by_termid":{"GO:0071586":null}}


id: _global:correlates_with
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"correlates_with","termid":"_global:correlates_with"}


id: PBO:0061174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (TTG) 4-1","termid":"PBO:0061174"}


id: PBO:0085535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S6, no bacterial homolog; phosphorylated on S233 by Ypk3p in a TORC1-dependent manner, and on S232 in a TORC1/2-dependent manner by Ypk1/2/3p; RPS6A has a paralog, RPS6B, that arose from the whole genome duplication","termid":"PBO:0085535"}


id: PBO:0066649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras and Rab interactor 3","termid":"PBO:0066649"}


id: PBO:0001690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-L, N-acetylglucosaminylphosphatidyl inositoldeacetylase (predicted)","termid":"PBO:0001690"}


id: PBO:0063029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAIP1 pseudogene 1","termid":"PBO:0063029"}


id: GO:1901732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving quercetin.","definition_xrefs":["UniPathway:UPA00724","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavone metabolic process","termid":"GO:0051552"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"quercetin metabolic process","synonyms":[{"name":"quercetin metabolism","type":"exact"}],"termid":"GO:1901732"}


id: GO:0048861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a leukemia inhibitory factor to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme-linked receptor protein signaling pathway","termid":"GO:0007167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"leukemia inhibitory factor signaling pathway","synonyms":[{"name":"leukemia inhibitory factor signalling pathway","type":"exact"}],"termid":"GO:0048861"}


id: PBO:0082614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Coiled-coil 12S polarisome subunit; required for polarity establishment, apical bud growth, shmoo formation, filamentous differentiation; involved in Bni1p localization at sites of polarized growth, controlling polarized assembly of actin cables; role in apical growth affects diploid-specific bipolar bud site selection; retains Slt2p at bud tip to regulate ER inheritance; role in Ca2+ influx, cell fusion; S288C allele encoding Leu409 rather than Met linked with non-invasion","termid":"PBO:0082614"}


id: PBO:0046121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E nuclear import factor 1","termid":"PBO:0046121"}


id: PBO:0089583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transcription elongation factor Ell1","termid":"PBO:0089583"}


id: PBO:0003390
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.21","termid":"PBO:0003390"}


id: GO:0004516
data:
  {"annotated_genes":["SJAG_03298"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85086],"is_not":false,"summary":null,"term":"GO:0004516"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: diphosphate + nicotinate D-ribonucleotide = 5-phospho-alpha-D-ribose 1-diphosphate + H+ + nicotinate.","definition_xrefs":["PMID:7503993"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03298":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"nicotinate phosphoribosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R01724","Reactome:R-HSA-197186","MetaCyc:NICOTINATEPRIBOSYLTRANS-RXN","RHEA:36163","EC:6.3.4.21"],"synonyms":[{"name":"niacin ribonucleotidase activity","type":"related"},{"name":"nicotinate-nucleotide:diphosphate phospho-alpha-D-ribosyltransferase activity","type":"related"},{"name":"nicotinic acid mononucleotide glycohydrolase activity","type":"related"},{"name":"nicotinic acid mononucleotide pyrophosphorylase activity","type":"related"},{"name":"nicotinic acid phosphoribosyltransferase activity","type":"related"}],"termid":"GO:0004516","terms_by_termid":{"GO:0004516":null}}


id: PBO:0061043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPA2 pseudogene 4","termid":"PBO:0061043"}


id: PBO:0082660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the CCR4-NOT transcriptional complex; evolutionarily conserved; involved in controlling mRNA initiation, elongation, and degradation; binds Cdc39p","termid":"PBO:0082660"}


id: PBO:0083179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the dubious ORF YHR180W-A","termid":"PBO:0083179"}


id: GO:0048576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases short-day photoperiodism, where the response associated with the photoperiodism is flowering. Flowering is defined by the switch from the vegetative to the reproductive phase.","definition_xrefs":["ISBN:0709408862","ISBN:0582015952","ISBN:0697037754","GOC:jid","GOC:pj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of post-embryonic development","termid":"GO:0048582"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of short-day photoperiodism, flowering","termid":"GO:0048587"},{"relation_name":"positively_regulates","term_name":"short-day photoperiodism, flowering","termid":"GO:0048575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of short-day photoperiodism, flowering","synonyms":[{"name":"activation of short-day photoperiodism, flowering","type":"narrow"},{"name":"stimulation of short-day photoperiodism, flowering","type":"narrow"},{"name":"up regulation of short-day photoperiodism, flowering","type":"exact"},{"name":"up-regulation of short-day photoperiodism, flowering","type":"exact"},{"name":"upregulation of short-day photoperiodism, flowering","type":"exact"}],"termid":"GO:0048576"}


id: PBO:0072281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S23 pseudogene 10","termid":"PBO:0072281"}


id: FYPO:0002442
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the site of cell division is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to cell division site","synonyms":[{"name":"normal protein localisation to cell division site","type":"exact"},{"name":"normal protein localization to cell division site during mitotic cell cycle","type":"related"},{"name":"normal protein localization to cell division site during vegetative growth","type":"exact"},{"name":"normal protein recruitment to cell division site","type":"related"}],"termid":"FYPO:0002442"}


id: GO:0033456
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GCG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0060090","GO:0003723"],"is_obsolete":false,"name":"GCG codon-amino acid adaptor activity","synonyms":[{"name":"alanine tRNA","type":"related"}],"termid":"GO:0033456"}


id: GO:0010189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of vitamin E, tocopherol, which includes a series of eight structurally similar compounds. Alpha-tocopherol is the most active form in humans and is a powerful biological antioxidant.","definition_xrefs":["GOC:mg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin E metabolic process","termid":"GO:0042360"},{"relation_name":"is_a","term_name":"fat-soluble vitamin biosynthetic process","termid":"GO:0042362"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0006766","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"vitamin E biosynthetic process","secondary_identifiers":["MetaCyc:PWY-1422"],"synonyms":[{"name":"alpha-tocopherol biosynthesis","type":"narrow"},{"name":"alpha-tocopherol biosynthetic process","type":"narrow"},{"name":"tocopherol biosynthesis","type":"exact"},{"name":"tocopherol biosynthetic process","type":"exact"},{"name":"vitamin E anabolism","type":"exact"},{"name":"vitamin E biosynthesis","type":"exact"},{"name":"vitamin E formation","type":"exact"},{"name":"vitamin E synthesis","type":"exact"}],"termid":"GO:0010189"}


id: GO:1990320
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XXI) chains; type XXI collagen triple helices found in the extracellular matrix component of blood vessel walls and in the cytoplasm of cultured human aortic smooth muscle.","definition_xrefs":["GOC:bhm","PMID:17876790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FACIT collagen trimer","termid":"GO:0005593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"collagen type XXI trimer","termid":"GO:1990320"}


id: PBO:0056027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSP1 pseudogene 5","termid":"PBO:0056027"}


id: PBO:0042003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 57","termid":"PBO:0042003"}


id: PBO:0041802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase recruitment domain family member 11","termid":"PBO:0041802"}


id: PBO:0051344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2D-26","termid":"PBO:0051344"}


id: PBO:0005740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase Ppe1","termid":"PBO:0005740"}


id: GO:0141040
data:
  {"annotated_genes":["SJAG_00630"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94266],"is_not":false,"summary":null,"term":"GO:0141040"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a very-long-chain (3R)-3-hydroxyacyl-CoA + NADP+ = a very-long-chain 3-oxoacyl-CoA + H+ + NADPH. This reaction is the second (reduction) step of the four-step fatty acid elongation cycle in the endoplasmic reticulum that extends fatty acids of C-16 or longer with an additional 2-C unit.","definition_xrefs":["PMID:19763486","PMID:16564093","RHEA:48680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00630":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"very-long-chain 3-oxoacyl-CoA reductase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-7698","EC:1.1.1.330","Reactome:R-HSA-548818"],"termid":"GO:0141040","terms_by_termid":{"GO:0141040":null}}


id: GO:0048527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the lateral root over time, from its formation to the mature structure. A lateral root is one formed from pericycle cells located on the xylem radius of the root, as opposed to the initiation of the main root from the embryo proper.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic root development","termid":"GO:0048528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral root development","termid":"GO:0048527"}


id: GO:0097726
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a LEM domain. The LEM domain (for lamina-associated polypeptide, emerin, MAN1 domain) is present in a group of nuclear proteins that bind chromatin through interaction of the LEM motif with the conserved DNA crosslinking protein, barrier-to-autointegration factor (BAF).","definition_xrefs":["InterPro:IPR003887","PMID:22399800","GOC:rz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"LEM domain binding","synonyms":[{"name":"LAP2, emerin, MAN1 domain binding","type":"exact"},{"name":"lamina-associated polypeptide, emerin, MAN1 domain binding","type":"exact"}],"termid":"GO:0097726"}


id: GO:0075153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism modulates the frequency, rate or extent of its transmembrane receptor-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transmembrane receptor-mediated signal transduction in response to host (obsolete GO:0075153)","synonyms":[{"name":"regulation of symbiont transmembrane receptor-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075153"}


id: PBO:0058331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4705","termid":"PBO:0058331"}


id: FYPO:0000070
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of amphotericin B than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"resistance to amphotericin B","synonyms":[{"name":"resistance to amphotericin B during mitotic cell cycle","type":"related"},{"name":"resistance to amphotericin B during vegetative growth","type":"exact"},{"name":"resistant to amphotericin","type":"exact"}],"termid":"FYPO:0000070"}


id: PBO:0029363
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_methylation","termid":"PBO:0029363"}


id: PBO:0048383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated RAB2 interactor family member 6","termid":"PBO:0048383"}


id: PBO:0091594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-dependent aldo-keto reductase","termid":"PBO:0091594"}


id: PBO:0067548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 697, pseudogene","termid":"PBO:0067548"}


id: PBO:0063372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prenylcysteine oxidase 1 like","termid":"PBO:0063372"}


id: PBO:0002263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-type proton ATPase, P3-type Pma1","termid":"PBO:0002263"}


id: GO:0140332
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Removes a lipopolysaccharide (LPS) from the outer leaflet of a donor membrane, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to the outer leaflet of an acceptor membrane.","definition_xrefs":["PMID:24639492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transfer activity","termid":"GO:0120013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0120013"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0120013"],"is_obsolete":false,"name":"lipopolysaccharide transfer activity","synonyms":[{"name":"intermembrane LPS transporter activity","type":"exact"},{"name":"intermembrane lipopolysaccharide transfer activity","type":"exact"},{"name":"intermembrane lipopolysaccharide transporter activity","type":"exact"},{"name":"lipopolysaccharide carrier activity","type":"exact"}],"termid":"GO:0140332"}


id: PR:P0CT53
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tef101 gene.","definition_xrefs":["UniProtKB:P0CT53","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 1-alpha-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.09c","synonyms":[{"name":"EF-1-alpha-A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tef101","type":"exact"}],"termid":"PR:P0CT53"}


id: GO:0097022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a lymphocyte within the lymphatic system into a lymph node, and its subsequent positioning within defined functional compartments such as sites of cell activation by antigen.","definition_xrefs":["GOC:pr","GOC:BHF","PMID:18379575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte migration into lymphoid organs","termid":"GO:0097021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphocyte migration into lymph node","synonyms":[{"name":"lymphocyte homing","type":"exact"}],"termid":"GO:0097022"}


id: PBO:0034458
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_level_of_iron_assimilation_gene_mRNA_during_vegetative_growth","termid":"PBO:0034458"}


id: GO:0031296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the B cell receptor to augment B cell activation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte costimulation","termid":"GO:0031294"},{"relation_name":"is_a","term_name":"positive regulation of B cell activation","termid":"GO:0050871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell costimulation","synonyms":[{"name":"B cell co-stimulation","type":"exact"},{"name":"B lymphocyte co-stimulation","type":"exact"},{"name":"B lymphocyte costimulation","type":"exact"},{"name":"B-cell co-stimulation","type":"exact"},{"name":"B-cell costimulation","type":"exact"},{"name":"B-lymphocyte co-stimulation","type":"exact"},{"name":"B-lymphocyte costimulation","type":"exact"}],"termid":"GO:0031296"}


id: PBO:0061992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily C member 3","termid":"PBO:0061992"}


id: GO:0035179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Fine-tuning the spatial position of a larva in response to variability in their environment. For example, reorientation of a larva in the direction of a food source.","definition_xrefs":["PMID:10880478"],"gene_count":0,"genotype_count":0,"name":"obsolete larval turning behavior (obsolete GO:0035179)","synonyms":[{"name":"larval turning behaviour","type":"exact"}],"termid":"GO:0035179"}


id: PBO:0048723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosyltransferase 1 domain containing 1","termid":"PBO:0048723"}


id: PBO:0044142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTBP2 pseudogene 8","termid":"PBO:0044142"}


id: PBO:0009818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eisosome protein Pil1","termid":"PBO:0009818"}


id: GO:1905879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of oogenesis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:26434723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of oogenesis","synonyms":[{"name":"regulation of ovum development","type":"exact"}],"termid":"GO:1905879"}


id: PBO:0044414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily S member 1","termid":"PBO:0044414"}


id: PBO:0059816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 42","termid":"PBO:0059816"}


id: PBO:0081424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 280B","termid":"PBO:0081424"}


id: PBO:0036376
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLUtamate requiring","termid":"PBO:0036376"}


id: SO:0000153
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Bacterial Artificial Chromosome, a cloning vector that can be propagated as mini-chromosomes in a bacterial host.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vector_replicon","termid":"SO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAC","synonyms":[{"name":"bacterial artificial chromosome","type":"exact"}],"termid":"SO:0000153"}


id: PBO:0091407
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assembly at damage sites is facilitated by Swi5 independently of Rad57","termid":"PBO:0091407"}


id: PBO:0064076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 110","termid":"PBO:0064076"}


id: PBO:0074224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 45 member 3","termid":"PBO:0074224"}


id: PBO:0067738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 37","termid":"PBO:0067738"}


id: GO:1990475
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synaptic vesicle belonging to the pool that repopulate vacancies within the readily releasable pool (RRP) of synaptic vesicles, and require more significant stimuli than the RRP in order to release neurotransmitter; about 10-15% of the total number of synaptic vesicles at a resting terminal bouton are in this state.","definition_xrefs":["GOC:pad","PMID:22745285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic vesicle","termid":"GO:0008021"},{"relation_name":"part_of","term_name":"postsynapse","termid":"GO:0098794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"synaptic vesicle, recycling pool","synonyms":[{"name":"recycling pool of synaptic vesicles","type":"exact"}],"termid":"GO:1990475"}


id: PBO:0088674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin-related substrate adaptor Rod1","termid":"PBO:0088674"}


id: GO:0000201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a MAP kinase to the nucleus that occurs in the context of cell wall organization or biogenesis.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPK import into nucleus involved in cell wall organization or biogenesis (obsolete GO:0000201)","synonyms":[{"name":"MAPK import into nucleus involved in cell wall biogenesis","type":"narrow"},{"name":"MAPK import into nucleus involved in cell wall integrity","type":"exact"},{"name":"cell wall biogenesis, MAPK import into nucleus","type":"exact"},{"name":"cell wall biogenesis, nuclear translocation of MAPK","type":"narrow"},{"name":"nuclear translocation of MAPK involved in cell wall biogenesis","type":"narrow"},{"name":"nuclear translocation of MAPK involved in cell wall integrity","type":"narrow"}],"termid":"GO:0000201"}


id: GO:0006131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydrolipoamide reduction (obsolete GO:0006131)","synonyms":[{"name":"dihydrolipoamide reduction","type":"exact"}],"termid":"GO:0006131"}


id: PBO:0046141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5A pseudogene 4","termid":"PBO:0046141"}


id: PBO:0046802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coagulation factor VIII","termid":"PBO:0046802"}


id: PBO:0083970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucokinase; catalyzes the phosphorylation of glucose at C6 in the first irreversible step of glucose metabolism; one of three glucose phosphorylating enzymes; expression regulated by non-fermentable carbon sources; GLK1 has a paralog, EMI2, that arose from the whole genome duplication","termid":"PBO:0083970"}


id: PBO:0077079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIR domain containing adaptor molecule 2","termid":"PBO:0077079"}


id: PBO:0111867
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-FYVE type","termid":"PBO:0111867"}


id: PBO:0047243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 236 member C","termid":"PBO:0047243"}


id: PBO:0047796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXG1 antisense RNA 1","termid":"PBO:0047796"}


id: PBO:0083645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Elongation factor 2 (EF-2), also encoded by EFT1; catalyzes ribosomal translocation during protein synthesis; contains diphthamide, the unique posttranslationally modified histidine residue specifically ADP-ribosylated by diphtheria toxin; EFT2 has a paralog, EFT1, that arose from the whole genome duplication","termid":"PBO:0083645"}


id: SOFP:keywords
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keywords","termid":"SOFP:keywords"}


id: GO:0046921
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an L-fucosyl group from GDP-beta-L-fucose to an acceptor molecule to form an alpha-(1->6) linkage.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucosyltransferase activity","termid":"GO:0008417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"alpha-(1->6)-fucosyltransferase activity","synonyms":[{"name":"alpha(1,6)-fucosyltransferase activity","type":"exact"},{"name":"alpha-(1,6)-fucosyltransferase activity","type":"exact"},{"name":"alpha-1,6-fucosyltransferase activity","type":"exact"}],"termid":"GO:0046921"}


id: PR:O42963
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nup44 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup44 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.15","synonyms":[{"name":"Spom972h-nup44","type":"exact"},{"name":"nuclear pore protein nup44 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42963"}


id: PBO:0047335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibulin 1","termid":"PBO:0047335"}


id: GO:0003684
data:
  {"annotated_genes":["SJAG_03906","SJAG_04410","SJAG_03855","SJAG_02698","SJAG_02334","SJAG_03722","SJAG_00941","SJAG_01887","SJAG_02828","SJAG_04147","SJAG_02556","SJAG_04372","SJAG_04791","SJAG_01971","SJAG_00634","SJAG_00640","SJAG_01119","SJAG_02261","SJAG_02545","SJAG_04089","SJAG_16460","SJAG_05257","SJAG_02079","SJAG_05372","SJAG_04778","SJAG_00995","SJAG_03734","SJAG_01049"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61771,84247,84361,88226,89050,90674,92243,94241,97635,98964,100056,104167,106880,107007,107307,107483,107616,107798,110354,112331,113217,113396,113660,114829],"is_not":false,"summary":null,"term":"GO:0003684"},{"annotations":[97633,103118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032131"},{"annotations":[103120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140431"},{"annotations":[84248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032132"},{"annotations":[90925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032357"},{"annotations":[91942,111759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990165"}]},"cv_name":"molecular_function","definition":"Binding to damaged DNA.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00634":null,"SJAG_00640":null,"SJAG_00941":null,"SJAG_00995":null,"SJAG_01049":null,"SJAG_01119":null,"SJAG_01887":null,"SJAG_01971":null,"SJAG_02079":null,"SJAG_02261":null,"SJAG_02334":null,"SJAG_02545":null,"SJAG_02556":null,"SJAG_02698":null,"SJAG_02828":null,"SJAG_03722":null,"SJAG_03734":null,"SJAG_03855":null,"SJAG_03906":null,"SJAG_04089":null,"SJAG_04147":null,"SJAG_04372":null,"SJAG_04410":null,"SJAG_04778":null,"SJAG_04791":null,"SJAG_05257":null,"SJAG_05372":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"damaged DNA binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA repair enzyme","type":"related"},{"name":"DNA repair protein","type":"related"}],"termid":"GO:0003684","terms_by_termid":{"GO:0003684":null,"GO:0032131":null,"GO:0032132":null,"GO:0032357":null,"GO:0140431":null,"GO:1990165":null}}


id: PBO:0069610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 887, pseudogene","termid":"PBO:0069610"}


id: PBO:0065880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB30 divergent transcript","termid":"PBO:0065880"}


id: PBO:0065538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylserine synthase 2","termid":"PBO:0065538"}


id: PBO:0080235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vimentin type intermediate filament associated coiled-coil protein","termid":"PBO:0080235"}


id: GO:0033939
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of alpha-D-(1->2)-(4-O-methyl)glucuronosyl links in the main chain of hardwood xylans.","definition_xrefs":["EC:3.2.1.131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"xylan alpha-1,2-glucuronosidase activity","secondary_identifiers":["MetaCyc:3.2.1.131-RXN"],"synonyms":[{"name":"1,2-alpha-glucuronidase activity","type":"related"},{"name":"alpha-(1->2)-glucuronidase activity","type":"related"},{"name":"xylan alpha-D-1,2-(4-O-methyl)glucuronohydrolase activity","type":"related"}],"termid":"GO:0033939"}


id: PBO:0060727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A13","termid":"PBO:0060727"}


id: PBO:0030949
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondrial_aggregation_at_cell_tip","termid":"PBO:0030949"}


id: GO:0003306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of Wnt protein to a receptor on the surface of the target cell, resulting a change in cell state that contributes to the progression of the heart over time.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Wnt signaling pathway","termid":"GO:0016055"},{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway involved in heart development","termid":"GO:0061311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Wnt signaling pathway involved in heart development","synonyms":[{"name":"Wnt receptor signaling pathway involved in heart development","type":"exact"},{"name":"Wnt receptor signalling pathway involved in heart development","type":"exact"},{"name":"Wnt-activated signaling pathway involved in heart development","type":"exact"}],"termid":"GO:0003306"}


id: PBO:0087397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Stress-induced Rab family GTPase; required for vacuolar protein sorting and endocytosis; involved in ionic stress tolerance; similar to Vps21p and Ypt52p; functional homolog of Vps21p; mammalian Rab5 homolog; YPT53 has a paralog, VPS21, that arose from the whole genome duplication","termid":"PBO:0087397"}


id: GO:0030695
data:
  {"annotated_genes":["SJAG_02012","SJAG_01184","SJAG_04837","SJAG_01695","SJAG_04765","SJAG_04491","SJAG_04938","SJAG_00289","SJAG_01319","SJAG_04776","SJAG_02520","SJAG_00092","SJAG_00514","SJAG_02307","SJAG_03246","SJAG_02231","SJAG_03655","SJAG_03085","SJAG_00801","SJAG_02390","SJAG_04498","SJAG_01025","SJAG_05210","SJAG_06588","SJAG_01415","SJAG_05184","SJAG_02645","SJAG_00824","SJAG_03361","SJAG_04724","SJAG_00991","SJAG_04203","SJAG_04080","SJAG_04943","SJAG_00338","SJAG_04284","SJAG_04400","SJAG_02539","SJAG_02278","SJAG_01114","SJAG_03678","SJAG_00216","SJAG_04733","SJAG_02819","SJAG_02422","SJAG_04283","SJAG_00864","SJAG_02379","SJAG_03705","SJAG_03268","SJAG_01048","SJAG_00467","SJAG_04391","SJAG_02004","SJAG_01011","SJAG_03748","SJAG_00028","SJAG_04074","SJAG_00807","SJAG_03142","SJAG_03021","SJAG_03338","SJAG_05346","SJAG_02471","SJAG_04464","SJAG_01699","SJAG_02277","SJAG_03153","SJAG_01386","SJAG_04653","SJAG_04982","SJAG_02486","SJAG_03600","SJAG_01576","SJAG_02248","SJAG_03089","SJAG_00551","SJAG_02160","SJAG_00064","SJAG_01526","SJAG_04771","SJAG_03836","SJAG_00143","SJAG_02027","SJAG_00990","SJAG_03581","SJAG_01600","SJAG_02765","SJAG_03488","SJAG_02666","SJAG_00858","SJAG_02063","SJAG_04910","SJAG_01659","SJAG_04013","SJAG_04615","SJAG_02368","SJAG_03002","SJAG_04548","SJAG_04462","SJAG_02529","SJAG_04010","SJAG_02833","SJAG_01309","SJAG_02831","SJAG_01367","SJAG_02493","SJAG_03704","SJAG_04522","SJAG_01030"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87148,92341,102723,112103,113566],"is_not":false,"summary":null,"term":"GO:0030695"},{"annotations":[99588,91930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005092"},{"annotations":[89216,92618,101215,85295,91004,101392,90234,111063,84539,89215,108040,83616,91477,102902,90235,94901,87314,101458,105641,103670,69640,95730,96400,113210,105471,113811,91931,94121,89376,90997,92162,65108,90033,94938,88895,101335,106905,107016,107518,110312,112111,103203,103097,103453,106162,94097,91088,98512,102522,112674,89280,89384,107427,101106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005096"},{"annotations":[112381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005095"},{"annotations":[92386,91053,106064,84131,92115,96562,106734,107074,111601,88167,106847,93874,113963,113977,88823,87058,110867,95171,93787,89922,90643,110688,112579,94513,85942,102459,106172,111870,92730,103047,110045,95897,94033,101178,93825,110044,93381,104365,73686,87529,110000,90381,96563,104009,105155,83595,87248,110790,95896,90107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005085"},{"annotations":[89554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005093"},{"annotations":[106859,95594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005094"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of a GTPase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside-triphosphatase regulator 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regulator activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0005083"],"synonyms":[{"name":"small GTPase regulator activity","type":"related"},{"name":"small GTPase regulatory/interacting protein activity","type":"related"}],"termid":"GO:0030695","terms_by_termid":{"GO:0005085":null,"GO:0005092":null,"GO:0005093":null,"GO:0005094":null,"GO:0005095":null,"GO:0005096":null,"GO:0030695":null}}


id: GO:2001049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tendon cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"tendon cell differentiation","termid":"GO:0035990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tendon cell differentiation","synonyms":[{"name":"regulation of muscle attachment cell differentiation","type":"exact"},{"name":"regulation of tenocyte differentiation","type":"related"}],"termid":"GO:2001049"}


id: FYPO:0003618
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing aculeacin A.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002060","FYPO:0002058","FYPO:0002057","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on aculeacin A","synonyms":[{"name":"normal cell population growth in presence of aculeacin A","type":"exact"},{"name":"normal cell population growth on aculeacin A","type":"exact"},{"name":"normal cellular response to aculeacin A","type":"related"},{"name":"normal vegetative cell population growth on aculeacin A","type":"exact"}],"termid":"FYPO:0003618"}


id: MOD:00691
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by formation of an 5-imidazolinone ring.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-imidazolinone ring crosslinked residues","termid":"MOD:00691"}


id: PBO:0075287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 29","termid":"PBO:0075287"}


id: PBO:0088972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S30","termid":"PBO:0088972"}


id: PBO:0091442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial conserved fungal protein Rrg8","termid":"PBO:0091442"}


id: GO:0097172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving N-acetylmuramic acid (MurNAc), a monosaccharide derivative of N-acetylglucosamine.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"N-acetylmuramic acid metabolic process","synonyms":[{"name":"N-acetylmuramate metabolic process","type":"exact"},{"name":"N-acetylmuramate metabolism","type":"exact"},{"name":"N-acetylmuramic acid metabolism","type":"exact"}],"termid":"GO:0097172"}


id: PBO:0069021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 266, pseudogene","termid":"PBO:0069021"}


id: PR:O14357
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gpi1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein gpi1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.11","synonyms":[{"name":"Spom972h-gpi1","type":"exact"}],"termid":"PR:O14357"}


id: PBO:0034310
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_muscle_origin","termid":"PBO:0034310"}


id: GO:0048244
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + O2 + phytanoyl-CoA = 2-hydroxyphytanoyl-CoA + CO2 + succinate.","definition_xrefs":["RHEA:16065","EC:1.14.11.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phytanoyl-CoA dioxygenase activity","secondary_identifiers":["Reactome:R-HSA-389639","MetaCyc:1.14.11.18-RXN","KEGG_REACTION:R05722"],"synonyms":[{"name":"phytanoyl-CoA 2 oxoglutarate dioxygenase activity","type":"related"},{"name":"phytanoyl-CoA 2-hydroxylase activity","type":"related"},{"name":"phytanoyl-CoA alpha-hydroxylase activity","type":"related"},{"name":"phytanoyl-CoA hydroxylase activity","type":"related"},{"name":"phytanoyl-CoA, 2-oxoglutarate:oxygen oxidoreductase (2-hydroxylating)","type":"related"}],"termid":"GO:0048244"}


id: RO:0002503
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"q towards e2 if and only if q is a relational quality such that q inheres-in some e, and e != e2 and q is dependent on e2","direct_ancestors":[{"relation_name":"is_a","term_name":"depends_on","termid":"RO:0002502"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"towards","termid":"RO:0002503"}


id: PBO:0045326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedicator of cytokinesis 5","termid":"PBO:0045326"}


id: GO:0018947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving organosilicons, organic compounds that contain silicon, in the absence of oxygen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organosilicon metabolic process","termid":"GO:0018945"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anaerobic organosilicon metabolic process","secondary_identifiers":["UM-BBD_pathwayID:osi"],"synonyms":[{"name":"anaerobic organosilicon metabolism","type":"exact"},{"name":"anaerobic organosilicone metabolic process","type":"exact"},{"name":"anaerobic organosilicone metabolism","type":"exact"}],"termid":"GO:0018947"}


id: GO:0018325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient phosphorylation of peptidyl-cysteine to form S-phospho-L-cysteine.","definition_xrefs":["RESID:AA0034"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via S-phospho-L-cysteine (obsolete GO:0018325)","termid":"GO:0018325"}


id: PBO:0041126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain containing 7 pseudogene 2","termid":"PBO:0041126"}


id: PBO:0057466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 584","termid":"PBO:0057466"}


id: PBO:0073286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 7","termid":"PBO:0073286"}


id: PBO:0041679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell adhesion molecule 4","termid":"PBO:0041679"}


id: PBO:0042867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP97 domain containing 2","termid":"PBO:0042867"}


id: GO:0061432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a methionine stimulus.","definition_xrefs":["GOC:dph","PMID:7891681"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to methionine (obsolete GO:0061432)","termid":"GO:0061432"}


id: PBO:0026816
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_during_nitrogen_starvation","termid":"PBO:0026816"}


id: GO:1990330
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotetrameric protein complex involved in the sulfur transfer during iron-sulfur cluster assembly and in the modification of tRNA wobble positions. In E. coli it consists of a central IscS dimer with the IscU protomers attached to one of the IscS units each via a disulfide (-SSH) group.","definition_xrefs":["GOC:bhm","PMID:20404999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cysteine desulfurase complex","termid":"GO:1990221"},{"relation_name":"is_a","term_name":"iron-sulfur cluster assembly complex","termid":"GO:1990229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991","GO:0005829"],"is_obsolete":false,"name":"IscS-IscU complex","termid":"GO:1990330"}


id: GO:0006587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation from tryptophan of serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indolalkylamine metabolic process","termid":"GO:0006586"},{"relation_name":"is_a","term_name":"aromatic amino acid metabolic process","termid":"GO:0009072"},{"relation_name":"is_a","term_name":"serotonin biosynthetic process","termid":"GO:0042427"},{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"serotonin biosynthetic process from tryptophan","synonyms":[{"name":"serotonin anabolism from tryptophan","type":"exact"},{"name":"serotonin formation from tryptophan","type":"exact"},{"name":"serotonin synthesis from tryptophan","type":"exact"}],"termid":"GO:0006587"}


id: GO:0046410
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-oxoglutarate + isochorismate = 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate + pyruvate + CO2.","definition_xrefs":["EC:2.5.1.64","PMID:1459959"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase activity (obsolete GO:0046410)","synonyms":[{"name":"2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase activity","type":"exact"}],"termid":"GO:0046410"}


id: FYPO:0004935
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during exit from mitosis is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during exit from mitosis","synonyms":[{"name":"decreased RNA accumulation during exit from mitosis","type":"related"},{"name":"decreased RNA level during exit from mitosis during mitotic cell cycle","type":"exact"},{"name":"decreased RNA level during exit from mitosis during vegetative growth","type":"exact"},{"name":"decreased RNA level during mitotic M/G1 transition","type":"related"},{"name":"decreased RNA level during mitotic exit","type":"exact"},{"name":"decreased transcript level during exit from mitosis","type":"exact"},{"name":"reduced RNA level during exit from mitosis","type":"exact"}],"termid":"FYPO:0004935"}


id: GO:0009491
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete redox-active disulfide bond electron carrier (obsolete GO:0009491)","synonyms":[{"name":"redox-active disulfide bond electron carrier","type":"exact"},{"name":"redox-active disulphide bond electron carrier","type":"exact"}],"termid":"GO:0009491"}


id: PBO:0005614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monothiol glutaredoxin Grx3","termid":"PBO:0005614"}


id: GO:0034679
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alpha9 subunit and one beta1 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"integrin alpha9-beta1 complex","synonyms":[{"name":"ITGA9-ITGB1 complex","type":"narrow"},{"name":"alpha9-beta1 integrin complex","type":"exact"}],"termid":"GO:0034679"}


id: GO:0051757
data:
  {"annotated_genes":["SJAG_04457","SJAG_02104"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106237,89938],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051755"}]},"cv_name":"biological_process","definition":"The process in which sister chromatids are physically detached from each other during meiosis.","definition_xrefs":["GOC:ai","PMID:14730319","PMID:16325576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome separation","termid":"GO:0051307"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02104":null,"SJAG_04457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0140013","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"meiotic sister chromatid separation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"meiotic sister chromatid resolution","type":"exact"}],"termid":"GO:0051757","terms_by_termid":{"GO:0051755":null}}


id: FYPO:0002090
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosomes or sister chromatids do not move towards the spindle poles at the same time during nuclear division, but instead one or more chromosomes remain distant from the spindle pole after the bulk of the DNA has separated. Segregation may stop before completing separation of chromosomes, or may eventually be completed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome segregation","termid":"FYPO:0000029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"lagging chromosomes","synonyms":[{"name":"chromosome segregation defects, lagging chromosomes","type":"exact"}],"termid":"FYPO:0002090"}


id: GO:0050769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neurogenesis, the generation of cells within the nervous system.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of neurogenesis","termid":"GO:0050767"},{"relation_name":"is_a","term_name":"positive regulation of nervous system development","termid":"GO:0051962"},{"relation_name":"positively_regulates","term_name":"neurogenesis","termid":"GO:0022008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neurogenesis","synonyms":[{"name":"activation of neurogenesis","type":"narrow"},{"name":"stimulation of neurogenesis","type":"narrow"},{"name":"up regulation of neurogenesis","type":"exact"},{"name":"up-regulation of neurogenesis","type":"exact"},{"name":"upregulation of neurogenesis","type":"exact"}],"termid":"GO:0050769"}


id: PBO:0050790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 3C2, pseudogene","termid":"PBO:0050790"}


id: PBO:0075802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small RNA binding exonuclease protection factor La","termid":"PBO:0075802"}


id: PBO:0083850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exosome non-catalytic core component; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; has similarity to E. coli RNase PH and to human hRrp45p (PM/SCL-75, EXOSC9); protein abundance increases in response to DNA replication stress","termid":"PBO:0083850"}


id: PATO:0000836
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000836 auditory ability value (obsolete PATO:0000836)","termid":"PATO:0000836"}


id: GO:0030420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a naturally transformable bacterium acquires the ability to take up exogenous DNA. This term should be applied only to naturally transformable bacteria, and should not be used in the context of artificially induced bacterial transformation.","definition_xrefs":["GOC:mah","ISBN:1555811027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stimulus","termid":"GO:0051716"},{"relation_name":"part_of","term_name":"DNA-mediated transformation","termid":"GO:0009294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of competence for transformation","termid":"GO:0030420"}


id: FYPO:0004140
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of glutathione (GSH) measured in a cell that is subject to nitrogen starvation is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell","termid":"FYPO:0000990"},{"relation_name":"is_a","term_name":"altered level of substance in cell during nitrogen starvation","termid":"FYPO:0004139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular glutathione level during nitrogen starvation","synonyms":[{"name":"increased cellular GSH level during nitrogen starvation","type":"exact"},{"name":"increased cellular L-gamma-glutamyl-L-cysteinylglycine level during nitrogen starvation","type":"exact"},{"name":"increased cellular glutathione level during nitrogen depletion","type":"exact"},{"name":"increased cellular glutathione level during nitrogen deprivation","type":"exact"},{"name":"increased cellular reduced glutathione level during nitrogen starvation","type":"exact"},{"name":"increased glutathione accumulation during nitrogen starvation","type":"related"}],"termid":"FYPO:0004140"}


id: GO:0035415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mitotic prometaphase, the stage following prophase in mitosis (in higher eukaryotes) during which the nuclear envelope is disrupted and breaks into membrane vesicles, and the spindle microtubules enter the nuclear region.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mitotic prometaphase (obsolete GO:0035415)","synonyms":[{"name":"regulation of mitotic prometaphase","type":"exact"}],"termid":"GO:0035415"}


id: PBO:0070390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor tyrosine kinase like orphan receptor 1","termid":"PBO:0070390"}


id: GO:1901526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitophagy.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macroautophagy","termid":"GO:0016239"},{"relation_name":"is_a","term_name":"regulation of mitophagy","termid":"GO:1901524"},{"relation_name":"is_a","term_name":"positive regulation of autophagy of mitochondrion","termid":"GO:1903599"},{"relation_name":"positively_regulates","term_name":"mitophagy","termid":"GO:0000423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0007005"},{"rel_name":"positively_regulates","termid":"GO:0006914"},{"rel_name":"regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0008150","GO:0044248","GO:0007005"],"is_obsolete":false,"name":"positive regulation of mitophagy","synonyms":[{"name":"activation of macromitophagy","type":"narrow"},{"name":"positive regulation of macromitophagy","type":"exact"},{"name":"up regulation of macromitophagy","type":"exact"},{"name":"up-regulation of macromitophagy","type":"exact"},{"name":"upregulation of macromitophagy","type":"exact"}],"termid":"GO:1901526"}


id: FYPO:0005976
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic spindle elongation is increased during anaphase B.","definition_xrefs":["PMID:27872152","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased rate of mitotic spindle elongation","termid":"FYPO:0007958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0000641","FYPO:0000054","FYPO:0000337","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased rate of mitotic spindle elongation during anaphase B","synonyms":[{"name":"increased rate of mitotic spindle elongation during anaphase B during vegetative growth","type":"exact"},{"name":"increased rate of mitotic spindle elongation during mitotic anaphase B","type":"exact"},{"name":"increased rate of mitotic spindle extension during anaphase B","type":"exact"},{"name":"increased rate of spindle elongation during anaphase B of mitosis","type":"exact"}],"termid":"FYPO:0005976"}


id: GO:1990249
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is capable of identifying lesions in DNA, such as pyrimidine-dimers, intrastrand cross-links, and bulky adducts. The wide range of substrate specificity suggests that the repair complex recognizes distortions in the DNA helix. It subsequently recruits a nucleotide-excision repair, preincision complex.","definition_xrefs":["GOC:bhm","PMID:22331906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"nucleotide-excision repair, DNA damage recognition complex","termid":"GO:1990249"}


id: PBO:0038668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACSL3 antisense RNA 1","termid":"PBO:0038668"}


id: _global:regulates_o_transports_or_maintains_localization_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_o_transports_or_maintains_localization_of","secondary_identifiers":["GOREL:0000038"],"termid":"_global:regulates_o_transports_or_maintains_localization_of"}


id: PBO:0073052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small cysteine and glycine repeat containing 10 (gene/pseudogene)","termid":"PBO:0073052"}


id: PBO:0076394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional adaptor 2A","termid":"PBO:0076394"}


id: PBO:0056552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minichromosome maintenance complex component 2","termid":"PBO:0056552"}


id: FYPO:0006470
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature ribosomal RNA (rRNA) measured in a cell is lower than normal. Total rRNA or a specific rRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mature ncRNA level","termid":"FYPO:0006466"},{"relation_name":"is_a","term_name":"altered mature rRNA level during vegetative growth","termid":"FYPO:0006468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased mature rRNA level","synonyms":[{"name":"decreased mature rRNA accumulation","type":"related"},{"name":"decreased mature rRNA level during mitotic cell cycle","type":"related"},{"name":"decreased mature rRNA level during vegetative growth","type":"exact"},{"name":"decreased mature rRNA transcript level","type":"exact"},{"name":"decreased mature ribosomal RNA level","type":"exact"},{"name":"decreased rRNA level","type":"broad"},{"name":"reduced mature rRNA level","type":"exact"}],"termid":"FYPO:0006470"}


id: GO:1904532
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any ATP-dependent microtubule motor activity, minus-end-directed that is involved in microtubule-based movement.","definition_xrefs":["GO_REF:0000061","GOC:TermGenie","PMID:25987607"],"gene_count":0,"genotype_count":0,"name":"obsolete ATP-dependent microtubule motor activity, minus-end-directed involved in microtubule-based movement (obsolete GO:1904532)","termid":"GO:1904532"}


id: PBO:0046544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group FRD member 1, envelope","termid":"PBO:0046544"}


id: GO:0035130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring after embryonic development, by which the anatomical structures of the pectoral fin are generated and organized. Pectoral fins are bilaterally paired fins mounted laterally and located behind the gill covers of fish. These fins are used for lateral mobility and propulsion.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic appendage morphogenesis","termid":"GO:0035120"},{"relation_name":"is_a","term_name":"pectoral fin morphogenesis","termid":"GO:0035138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic pectoral fin morphogenesis","termid":"GO:0035130"}


id: PBO:0113509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type 2C protein phosphatase (PP2C); dephosphorylates Hog1p, inactivating the osmosensing MAPK cascade; involved in Fus3p activation during pheromone response; deletion affects precursor tRNA splicing, mitochondrial inheritance, and sporulation; involved in myosin-V dependent inheritance of mitochondria, peroxisomes, vacuoles and secretory vesicles; localizes to the nucleus, cytoplasm and peroxisomes","termid":"PBO:0113509"}


id: GO:0039720
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nuclear viral factory formed by Baculoviruses. A vesicular structure in which virions are assembled.","definition_xrefs":["PMID:1433508","PMID:13358757","VZ:1951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear viral factory","termid":"GO:0039715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"virogenic stroma","synonyms":[{"name":"VS","type":"exact"}],"termid":"GO:0039720"}


id: PBO:0090735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase cascade scaffold protein Ahk1","termid":"PBO:0090735"}


id: GO:1904254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of an iron transmembrane transporter activity.","definition_xrefs":["GOC:kom","GOC:BHF","GO_REF:0000059","GOC:TermGenie","PMID:15514116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"regulation of iron ion transmembrane transport","termid":"GO:0034759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of iron ion transmembrane transporter activity","synonyms":[{"name":"regulation of iron cation channel activity","type":"exact"},{"name":"regulation of iron channel activity","type":"exact"},{"name":"regulation of iron-specific channel activity","type":"exact"}],"termid":"GO:1904254"}


id: PBO:0017524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folylpolyglutamate synthase Fol3 (predicted)","termid":"PBO:0017524"}


id: PBO:0040753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bradykinin receptor B2","termid":"PBO:0040753"}


id: PBO:0088376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi phosphoenolpyruvate transmembrane transporter Pet2","termid":"PBO:0088376"}


id: GO:0043082
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The nucleus of a plant egg cell. This nucleus is found at the micropylar end of the embryo.","definition_xrefs":["GOC:jl","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megasporocyte nucleus","termid":"GO:0043076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"megagametophyte egg cell nucleus","termid":"GO:0043082"}


id: PBO:0063490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ and LIM domain 1 pseudogene 1","termid":"PBO:0063490"}


id: PBO:0070256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U11 small nuclear","termid":"PBO:0070256"}


id: GO:2000142
data:
  {"annotated_genes":["SJAG_00909","SJAG_05203","SJAG_00342","SJAG_05341","SJAG_00904","SJAG_04705","SJAG_00766","SJAG_02849","SJAG_02494","SJAG_02551","SJAG_04099","SJAG_00297","SJAG_01403","SJAG_04647","SJAG_03061","SJAG_01952","SJAG_03622","SJAG_00150","SJAG_04820","SJAG_02391","SJAG_03573","SJAG_01771","SJAG_03590","SJAG_03421"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111254,85776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045899"},{"annotations":[90397,91924,102087,83530,105088,94736,111364,95086,99479,102281,102415,114995,98015,90508,101736,104802,86429,110795,99742,104775,86739,91442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060261"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA-templated transcription initiation.","definition_xrefs":["GOC:mah","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"regulates","term_name":"DNA-templated transcription initiation","termid":"GO:0006352"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00297":null,"SJAG_00342":null,"SJAG_00766":null,"SJAG_00904":null,"SJAG_00909":null,"SJAG_01403":null,"SJAG_01771":null,"SJAG_01952":null,"SJAG_02391":null,"SJAG_02494":null,"SJAG_02551":null,"SJAG_02849":null,"SJAG_03061":null,"SJAG_03421":null,"SJAG_03573":null,"SJAG_03590":null,"SJAG_03622":null,"SJAG_04099":null,"SJAG_04647":null,"SJAG_04705":null,"SJAG_04820":null,"SJAG_05203":null,"SJAG_05341":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"regulation of DNA-templated transcription initiation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of DNA-dependent transcription, initiation","type":"exact"},{"name":"regulation of DNA-templated transcription, initiation","type":"exact"},{"name":"regulation of initiation of DNA-dependent transcription","type":"exact"},{"name":"regulation of transcription initiation, DNA-dependent","type":"exact"}],"termid":"GO:2000142","terms_by_termid":{"GO:0045899":null,"GO:0060261":null}}


id: GO:0030093
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Photosystem located in the chloroplast that functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin. An example of this is found in Arabidopsis thaliana.","definition_xrefs":["GOC:jid","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosystem I","termid":"GO:0009522"},{"relation_name":"is_a","term_name":"chloroplast thylakoid membrane protein complex","termid":"GO:0098807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"chloroplast photosystem I","termid":"GO:0030093"}


