# terms

id: PBO:0005664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase Gut2 (predicted)","termid":"PBO:0005664"}


id: PBO:0033785
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_anaphase-promoting_complex-dependent_protein_catabolic_process","termid":"PBO:0033785"}


id: FYPO:0006571
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a cyclin-dependent protein kinase activity is increased during a cellular response to a pheromone.","definition_xrefs":["PMID:9614176","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cyclin-dependent protein kinase activity","termid":"FYPO:0004319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0001985","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"increased cyclin-dependent protein kinase activity during cellular response to pheromone","termid":"FYPO:0006571"}


id: PBO:0062680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily A member 1 pseudogene","termid":"PBO:0062680"}


id: PBO:0064688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 24","termid":"PBO:0064688"}


id: MOD:01698
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an amino group with a trimethylaminium group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trimethylated protonated-residue","termid":"MOD:00711"},{"relation_name":"is_a","term_name":"alpha-amino methylated residue","termid":"MOD:01460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"alpha-amino trimethylated protonated-residue","synonyms":[{"name":"N2Me3+Res","type":"exact"},{"name":"Trimethyl","type":"related"},{"name":"tri-Methylation","type":"related"}],"termid":"MOD:01698"}


id: SO:1001255
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1001255 status_of_coding_sequence (obsolete SO:1001255)","termid":"SO:1001255"}


id: MOD:00020
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to an L-leucine.","definition_xrefs":["PubMed:6692818","DeltaMass:0","PubMed:11478885","RESID:AA0011","ChEBI:30006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 113.084064 Da","termid":"MOD:00306"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-leucine residue","synonyms":[{"name":"(2S)-2-amino-4-methylpentanoic acid","type":"exact"},{"name":"2-azanyl-4-methylpentanoic acid","type":"exact"},{"name":"4-methyl-norvaline","type":"exact"},{"name":"L-leucine","type":"exact"},{"name":"Leu","type":"exact"},{"name":"alpha-amino-gamma-methylvaleric acid","type":"exact"},{"name":"alpha-aminoisocaproic acid","type":"exact"}],"termid":"MOD:00020"}


id: PBO:0080241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 4","termid":"PBO:0080241"}


id: SO:0002274
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Short interspersed elements that originated from tRNAs.","definition_xrefs":["PMID:21673742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SINE_element","termid":"SO:0000206"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA_SINE_retrotransposon","synonyms":[{"name":"RST retrotransposon","type":"exact"},{"name":"tRNA SINE element","type":"exact"},{"name":"tRNA SINE retrotransposon","type":"exact"}],"termid":"SO:0002274"}


id: PBO:0003230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kip3 subfamily","termid":"PBO:0003230"}


id: FYPO:0004590
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which localization of the gamma-tubulin complex to the spindle pole body takes place abnormally after the cell has undergone a normal mitotic nuclear division and passed through the subsequent mitotic interphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body","termid":"FYPO:0004589"},{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype following normal mitosis","termid":"FYPO:0004593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body following normal mitosis","synonyms":[{"name":"abnormal gamma-tubulin complex localisation to mitotic spindle pole body following normal mitosis","type":"exact"},{"name":"abnormal gamma-tubulin complex localization to mitotic SPB following normal mitosis","type":"exact"},{"name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body following normal mitosis and interphase","type":"exact"},{"name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body following normal mitosis and passage through mitotic G1 phase","type":"exact"},{"name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body following normal mitosis during vegetative growth","type":"exact"},{"name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body nuclear division following normal mitotic nuclear division","type":"exact"},{"name":"abnormal gamma-tubulin complex localization to spindle pole body following normal nuclear division during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004590"}


id: GO:0006522
data:
  {"annotated_genes":["SJAG_02496","SJAG_04145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110809],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046436"},{"annotations":[107292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042853"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving alanine, 2-aminopropanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02496":null,"SJAG_04145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"alanine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"alanine metabolism","type":"exact"}],"termid":"GO:0006522","terms_by_termid":{"GO:0042853":null,"GO:0046436":null}}


id: GO:0018893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dibenzofuran, a substance composed of two benzene rings linked by one ether bond and one carbon-carbon bond. Dibenzofuran is a white crystalline solid created from the production of coal tar and used as an insecticide and an intermediate in the production of other chemicals.","definition_xrefs":["UM-BBD_pathwayID:dbf","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dibenzofuran metabolic process","synonyms":[{"name":"dibenzofuran metabolism","type":"exact"}],"termid":"GO:0018893"}


id: GO:0015603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of an iron chelate from one side of a membrane to the other. An iron chelate is a heterocyclic compound having a metal ion attached by coordinate bonds to at least two nonmetal ions.","definition_xrefs":["PMID:17660286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"iron chelate transmembrane transporter activity","termid":"GO:0015603"}


id: GO:0006857
data:
  {"annotated_genes":["SJAG_02602","SJAG_05182","SJAG_01344","SJAG_05213","SJAG_01983","SJAG_03577","SJAG_02139","SJAG_01660","SJAG_03497","SJAG_00922"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140206"},{"annotations":[114406,114407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035442"},{"annotations":[91586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098709"},{"annotations":[109200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160007"},{"annotations":[93119,92131,114263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071996"},{"annotations":[91587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034775"},{"annotations":[63402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035672"},{"annotations":[92132,93120,114264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036246"},{"annotations":[104037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901583"},{"annotations":[99076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140207"},{"annotations":[59097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042939"}]},"cv_name":"biological_process","definition":"The directed movement of oligopeptides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00922":null,"SJAG_01344":null,"SJAG_01660":null,"SJAG_01983":null,"SJAG_02139":null,"SJAG_02602":null,"SJAG_03497":null,"SJAG_03577":null,"SJAG_05182":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"oligopeptide transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0006857","terms_by_termid":{"GO:0034775":null,"GO:0035442":null,"GO:0035672":null,"GO:0036246":null,"GO:0042939":null,"GO:0071996":null,"GO:0098709":null,"GO:0140206":null,"GO:0140207":null,"GO:0160007":null,"GO:1901583":null}}


id: GO:0036176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a neutral pH (pH close to 7) stimulus. pH is a measure of the acidity or basicity of an aqueous solution.","definition_xrefs":["Wikipedia:PH","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to pH","termid":"GO:0009268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to neutral pH","termid":"GO:0036176"}


id: PBO:0087576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the 26S proteasome; substrate of the N-acetyltransferase Nat1p; protein abundance increases in response to DNA replication stress","termid":"PBO:0087576"}


id: PBO:0074946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 110","termid":"PBO:0074946"}


id: GO:2000459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of astrocyte chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemotaxis","termid":"GO:0050922"},{"relation_name":"is_a","term_name":"negative regulation of glial cell migration","termid":"GO:1903976"},{"relation_name":"is_a","term_name":"regulation of astrocyte chemotaxis","termid":"GO:2000458"},{"relation_name":"negatively_regulates","term_name":"astrocyte chemotaxis","termid":"GO:0035700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of astrocyte chemotaxis","termid":"GO:2000459"}


id: PBO:0108914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAG3 cohesin complex component","termid":"PBO:0108914"}


id: PBO:0050305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 7","termid":"PBO:0050305"}


id: PBO:0073190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein T pseudogene 1","termid":"PBO:0073190"}


id: PBO:0087680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the mitochondrial (mt) i-AAA protease supercomplex; i-AAA degrades misfolded mitochondrial proteins; forms a subcomplex with Mgr1p that binds to substrates to facilitate proteolysis; required for growth of cells lacking mtDNA","termid":"PBO:0087680"}


id: PBO:0110362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC9 pseudogene 1","termid":"PBO:0110362"}


id: GO:0043586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the tongue over time, from its formation to the mature structure. The tongue is the movable, muscular organ on the floor of the mouth of most vertebrates, in many other mammals is the principal organ of taste, aids in the prehension of food, in swallowing, and in modifying the voice as in speech.","definition_xrefs":["GOC:jl","UBERON:0001723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tongue development","synonyms":[{"name":"glossa development","type":"narrow"},{"name":"lingua development","type":"narrow"}],"termid":"GO:0043586"}


id: GO:0034940
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5-oxo-4,5-dihydropyrrole-2-carboxylate + 2 H2O = 2-oxoglutarate + NH3.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 5-oxo-4,5-dihydropyrrole-2-carboxylate amidase activity (obsolete GO:0034940)","termid":"GO:0034940"}


id: PBO:0002147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AT hook protein","termid":"PBO:0002147"}


id: GO:0046623
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the movement of a sphingolipid from the cytosolic to the exoplasmic leaftlet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["PMID:12034738","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid transporter activity","termid":"GO:0046624"},{"relation_name":"is_a","term_name":"floppase activity","termid":"GO:0140328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140303","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"sphingolipid floppase activity","synonyms":[{"name":"sphingolipid flippase activity","type":"exact"},{"name":"sphingolipid floppase activity (cytosolic to exoplasmic leaftlet)","type":"exact"},{"name":"sphingolipid-translocating ATPase activity","type":"related"}],"termid":"GO:0046623"}


id: PBO:0054569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1971","termid":"PBO:0054569"}


id: GO:0070037
data:
  {"annotated_genes":["SJAG_02024"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87373],"is_not":false,"summary":null,"term":"GO:0070037"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a pseudouridine residue in an rRNA molecule.","definition_xrefs":["GOC:imk","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA methyltransferase activity","termid":"GO:0008649"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003674","GO:0003824","GO:0140098"],"is_obsolete":false,"name":"rRNA (pseudouridine) methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6790906"],"termid":"GO:0070037","terms_by_termid":{"GO:0070037":null}}


id: PBO:0083244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; extensively overlaps essential SMD1 gene encoding a U6 snRNP protein","termid":"PBO:0083244"}


id: PBO:0073017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synthesis of cytochrome C oxidase 1","termid":"PBO:0073017"}


id: GO:0047983
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-alanine + L-gamma-glutamyl-L-cysteine + ATP = gamma-L-glutamyl-L-cysteinyl-beta-alanine + ADP + 2 H+ + phosphate.","definition_xrefs":["EC:6.3.2.23","RHEA:17993"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"homoglutathione synthase activity","secondary_identifiers":["KEGG_REACTION:R02741","MetaCyc:HOMOGLUTATHIONE-SYNTHASE-RXN"],"synonyms":[{"name":"beta-alanine specific hGSH synthetase activity","type":"related"},{"name":"gamma-L-glutamyl-L-cysteine:beta-alanine ligase (ADP-forming)","type":"related"},{"name":"homoglutathione synthetase activity","type":"related"}],"termid":"GO:0047983"}


id: PR:Q09885
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC584.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"survival factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC584.11c","synonyms":[{"name":"Spom972h-SPCC584.11c","type":"exact"}],"termid":"PR:Q09885"}


id: PBO:0042865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 97","termid":"PBO:0042865"}


id: PBO:0043238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride voltage-gated channel Kb","termid":"PBO:0043238"}


id: PBO:0078319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta joining 1","termid":"PBO:0078319"}


id: GO:0090315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the process of directing proteins towards a membrane, usually using signals contained within the protein.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein targeting to membrane","termid":"GO:0090313"},{"relation_name":"is_a","term_name":"negative regulation of establishment of protein localization","termid":"GO:1904950"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to membrane","termid":"GO:1905476"},{"relation_name":"negatively_regulates","term_name":"protein targeting to membrane","termid":"GO:0006612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006605"},{"rel_name":"negatively_regulates","termid":"GO:0006605"}],"interesting_parent_ids":["GO:0006605","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein targeting to membrane","termid":"GO:0090315"}


id: GO:0016630
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: chlorophyllide a + NADP+ = protochlorophyllide + NADPH + H+.","definition_xrefs":["EC:1.3.1.33"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"protochlorophyllide reductase activity","secondary_identifiers":["MetaCyc:RXN1F-10","RHEA:11132"],"synonyms":[{"name":"NADPH-protochlorophyllide oxidoreductase activity","type":"related"},{"name":"NADPH-protochlorophyllide reductase activity","type":"related"},{"name":"NADPH2-protochlorophyllide oxidoreductase activity","type":"related"},{"name":"chlorophyllide-a:NADP+ 7,8-oxidoreductase activity","type":"related"},{"name":"protochlorophyllide oxidoreductase activity","type":"related"},{"name":"protochlorophyllide photooxidoreductase activity","type":"related"}],"termid":"GO:0016630"}


id: GO:0030919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of peptidyl-serine to form peptidyl-O-acetyl-L-serine.","definition_xrefs":["RESID:AA0364","PMID:7309355","PMID:489587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-serine modification","termid":"GO:0018209"},{"relation_name":"is_a","term_name":"peptidyl-serine acetylation","termid":"GO:0030920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-serine O-acetylation","termid":"GO:0030919"}


id: GO:0003712
data:
  {"annotated_genes":["SJAG_01403","SJAG_02927","SJAG_01778","SJAG_00297","SJAG_02846","SJAG_05203","SJAG_04205","SJAG_02671","SJAG_01728","SJAG_01157","SJAG_00861","SJAG_06638","SJAG_04705","SJAG_01658","SJAG_01804","SJAG_03590","SJAG_04820","SJAG_03527","SJAG_02196","SJAG_02385","SJAG_03776","SJAG_04099","SJAG_03981","SJAG_02474","SJAG_00613","SJAG_00904","SJAG_02066","SJAG_00584","SJAG_01916","SJAG_03599","SJAG_04396","SJAG_00809","SJAG_05341","SJAG_01771","SJAG_03441","SJAG_00441","SJAG_04389","SJAG_04186","SJAG_00641","SJAG_00087","SJAG_00164","SJAG_03924","SJAG_02391","SJAG_02494","SJAG_04613","SJAG_00156","SJAG_03573","SJAG_04607","SJAG_00290","SJAG_00909","SJAG_01111","SJAG_03664","SJAG_01952","SJAG_00342","SJAG_02849","SJAG_02165","SJAG_04213","SJAG_04381","SJAG_03945","SJAG_03622","SJAG_02831","SJAG_00184","SJAG_04921","SJAG_01926","SJAG_03845","SJAG_05153","SJAG_02255","SJAG_00269","SJAG_04647","SJAG_03668","SJAG_02990","SJAG_02401","SJAG_01113","SJAG_00822","SJAG_02541","SJAG_02458","SJAG_01711","SJAG_01475","SJAG_04274","SJAG_03627"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76193,76638,84862,86820,91141,91953,95031,104512,111325,113826],"is_not":false,"summary":null,"term":"GO:0003712"},{"annotations":[113682,111457,115155,108612,101816,91594,91925,90509,93884,103860,85351,104803,94641,90402,104777,109043,90147,91444,86430,96547,110374,115156,99431,94567,98925,95087,99743,108357,112363,99480,95355,98016,103109,92224,85179,89548,103471,83531,110797,102418,103738,104289,99231,107816,113635,86740,114996,85779,102779,94737,102283,102952,103384,84416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003713"},{"annotations":[93289,97035,101074,110211,103054,89252,100322,87308,89288,98846,100264,100024,89838,102780,94945,100382,108153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003714"}]},"cv_name":"molecular_function","definition":"A transcription regulator activity that modulates the transcription of specific gene sets via binding to a DNA-bound DNA-binding transcription factor, either on its own or as part of a complex. 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id: FYPO:0002110
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable, and tapers at one end to a diameter smaller than the other. The cell diameter at the narrow end is smaller than that of a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable tapered cell","termid":"FYPO:0002108"},{"relation_name":"is_a","term_name":"viable vegetative cell with abnormal cell shape","termid":"FYPO:0002197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000004","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"viable tapered vegetative cell","synonyms":[{"name":"viable bottle-shaped vegetative cell","type":"exact"},{"name":"viable bottle-shaped vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable bottle/skittle vegetative cell","type":"exact"},{"name":"viable skittle-shaped vegetative cell","type":"exact"},{"name":"viable tapered cell during vegetative growth","type":"exact"}],"termid":"FYPO:0002110"}


id: PBO:0080176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 11","termid":"PBO:0080176"}


id: PBO:0050203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 20","termid":"PBO:0050203"}


id: SO:1000046
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal inversion that includes the centromere.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"pericentric","termid":"SO:0001518"},{"relation_name":"is_a","term_name":"chromosomal_inversion","termid":"SO:1000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pericentric_inversion","synonyms":[{"name":"pericentric inversion","type":"exact"}],"termid":"SO:1000046"}


id: PBO:0004987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase family M20 protein","termid":"PBO:0004987"}


id: GO:0090006
data:
  {"annotated_genes":["SJAG_03048","SJAG_02104","SJAG_04457"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89942,106239],"is_not":false,"summary":null,"term":"GO:0090006"},{"annotations":[98454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062123"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of linear element assembly. Linear element assembly is the cell cycle process in which a proteinaceous scaffold, related to the synaptonemal complex, is assembled in association with S. pombe chromosomes during meiotic prophase.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"is_a","term_name":"regulation of homologous chromosome segregation","termid":"GO:0060629"},{"relation_name":"regulates","term_name":"linear element assembly","termid":"GO:0030999"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02104":null,"SJAG_03048":null,"SJAG_04457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of linear element assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090006","terms_by_termid":{"GO:0062123":null,"GO:0090006":null}}


id: GO:0015432
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: bile acid(in) + ATP + H2O -> bile acid(out) + ADP + phosphate.","definition_xrefs":["RHEA:50048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile acid transmembrane transporter activity","termid":"GO:0015125"},{"relation_name":"is_a","term_name":"ATPase-coupled monocarboxylic acid transmembrane transporter activity","termid":"GO:0033285"},{"relation_name":"is_a","term_name":"ATPase-coupled lipid transmembrane transporter activity","termid":"GO:0034040"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ABC-type bile acid transporter activity","secondary_identifiers":["Reactome:R-HSA-193362","TC:3.A.1.207.2","Reactome:R-HSA-194153","Reactome:R-HSA-5678517"],"synonyms":[{"name":"ATP-dependent bile acid transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled bile acid transmembrane transporter activity","type":"related"},{"name":"bile acid porter activity","type":"narrow"},{"name":"bile acid-exporting ATPase activity","type":"narrow"}],"termid":"GO:0015432"}


id: FYPO:0003246
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through S phase of the mitotic cell cycle is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle phase","termid":"FYPO:0002740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic S phase progression","synonyms":[{"name":"normal S phase progression during mitotic cell cycle","type":"exact"},{"name":"normal mitotic S phase progression during vegetative growth","type":"exact"},{"name":"normal mitotic cell cycle progression in S","type":"exact"}],"termid":"FYPO:0003246"}


id: PBO:0038460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-aminobutyrate aminotransferase","termid":"PBO:0038460"}


id: PBO:0062210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AK member 1 pseudogene","termid":"PBO:0062210"}


id: GO:0006201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of guanosine monophosphate into other compounds, including inosine monophosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GMP catabolic process","termid":"GO:0046038"},{"relation_name":"is_a","term_name":"IMP metabolic process","termid":"GO:0046040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"GMP catabolic process to IMP","synonyms":[{"name":"GMP breakdown to IMP","type":"exact"},{"name":"GMP degradation to IMP","type":"exact"}],"termid":"GO:0006201"}


id: PBO:0041672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell adhesion molecule 1","termid":"PBO:0041672"}


id: GO:1905472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H3-K79 dimethylation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:27541139"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-K79 dimethylation (obsolete GO:1905472)","synonyms":[{"name":"down regulation of histone H3 K79 dimethylation","type":"exact"},{"name":"down regulation of histone H3-K79 dimethylation","type":"exact"},{"name":"down regulation of histone lysine H3 K79 dimethylation","type":"exact"},{"name":"down-regulation of histone H3 K79 dimethylation","type":"exact"},{"name":"down-regulation of histone H3-K79 dimethylation","type":"exact"},{"name":"down-regulation of histone lysine H3 K79 dimethylation","type":"exact"},{"name":"downregulation of histone H3 K79 dimethylation","type":"exact"},{"name":"downregulation of histone H3-K79 dimethylation","type":"exact"},{"name":"downregulation of histone lysine H3 K79 dimethylation","type":"exact"},{"name":"inhibition of histone H3 K79 dimethylation","type":"narrow"},{"name":"inhibition of histone H3-K79 dimethylation","type":"narrow"},{"name":"inhibition of histone lysine H3 K79 dimethylation","type":"narrow"},{"name":"negative regulation of histone H3 K79 dimethylation","type":"exact"},{"name":"negative regulation of histone lysine H3 K79 dimethylation","type":"exact"}],"termid":"GO:1905472"}


id: PBO:0048516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glial cell derived neurotrophic factor","termid":"PBO:0048516"}


id: PBO:0070621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 like 1 pseudogene 5","termid":"PBO:0070621"}


id: PBO:0077645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF alpha induced protein 2","termid":"PBO:0077645"}


id: GO:1900825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of membrane depolarization during a cardiac muscle cell action potential.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane depolarization during action potential","termid":"GO:0098902"},{"relation_name":"regulates","term_name":"membrane depolarization during cardiac muscle cell action potential","termid":"GO:0086012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of membrane depolarization during cardiac muscle cell action potential","termid":"GO:1900825"}


id: GO:0046034
data:
  {"annotated_genes":["SJAG_00985","SJAG_03828","SJAG_06622","SJAG_02107","SJAG_02945","SJAG_05314","SJAG_03660","SJAG_00836","SJAG_03373","SJAG_03852","SJAG_00027","SJAG_04192","SJAG_02796","SJAG_00633","SJAG_04334","SJAG_02564","SJAG_01471","SJAG_00461","SJAG_MIT09","SJAG_02105","SJAG_00438","SJAG_00136","SJAG_00685","SJAG_00915","SJAG_03925","SJAG_02369","SJAG_03114","SJAG_02009","SJAG_03903","SJAG_00542","SJAG_07003","SJAG_00605","SJAG_01310","SJAG_04495","SJAG_05204","SJAG_00133","SJAG_04422","SJAG_02785","SJAG_04048","SJAG_04122","SJAG_02598","SJAG_00839","SJAG_02135","SJAG_06621","SJAG_02038","SJAG_MIT15","SJAG_MIT37"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92675,94192,94972],"is_not":false,"summary":null,"term":"GO:0046034"},{"annotations":[105438,101504,100521,94332,104977,104981,104982,90583,91072,101502,101503,101868,94057,104983,105439,99448,105444,99706,101869,105442,105443,104978,105441,104979,112424,104980,105440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[100523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006096"},{"annotations":[84676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[94250,107638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[72110,74928],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[66567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015986"},{"annotations":[85195,99099,99718,99747,101050,88904,89331,103954,104840,103864,90898,115121,115132,97875,89926,111912,115127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[85278],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"},{"annotations":[114067],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905706"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving ATP, adenosine triphosphate, a universally important coenzyme and enzyme regulator.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside triphosphate metabolic process","termid":"GO:0009205"}],"gene_count":47,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00133":null,"SJAG_00136":null,"SJAG_00438":null,"SJAG_00461":null,"SJAG_00542":null,"SJAG_00605":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_00836":null,"SJAG_00839":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01310":null,"SJAG_01471":null,"SJAG_02009":null,"SJAG_02038":null,"SJAG_02105":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03114":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_03925":null,"SJAG_04048":null,"SJAG_04122":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04422":null,"SJAG_04495":null,"SJAG_05204":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ATP metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"ATP metabolism","type":"exact"}],"termid":"GO:0046034","terms_by_termid":{"GO:0006096":null,"GO:0006110":null,"GO:0015986":null,"GO:0042776":null,"GO:0045820":null,"GO:0046034":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null,"GO:1905706":null}}


id: PBO:0110172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation factor Sls1","termid":"PBO:0110172"}


id: GO:1900145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of a nodal signaling pathway, where the nodal signaling pathway is involved in determination of left/right asymmetry.","definition_xrefs":["GOC:vk","GOC:BHF","GOC:signaling","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of nodal signaling pathway involved in determination of left/right asymmetry (obsolete GO:1900145)","synonyms":[{"name":"regulation of nodal signalling pathway involved in determination of left/right asymmetry","type":"exact"}],"termid":"GO:1900145"}


id: GO:0032033
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a light chain of a myosin II complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin light chain binding","termid":"GO:0032027"},{"relation_name":"is_a","term_name":"myosin II binding","termid":"GO:0045159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0008092","GO:0005488"],"is_obsolete":false,"name":"myosin II light chain binding","termid":"GO:0032033"}


id: PBO:0080205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VEZT pseudogene 1","termid":"PBO:0080205"}


id: PR:G2TRK8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- new12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRK8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein new12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.15","synonyms":[{"name":"Spom972h-new12","type":"exact"}],"termid":"PR:G2TRK8"}


id: PBO:0063153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pro-apoptotic WT1 regulator pseudogene 1","termid":"PBO:0063153"}


id: PBO:0080796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-prolyl aminopeptidase 3","termid":"PBO:0080796"}


id: GO:0033765
data:
  {"annotated_genes":["SJAG_02291","SJAG_04954"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61014,96725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003865"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor, and in which one substrate is a sterol derivative.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity","termid":"GO:0016229"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02291":null,"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"steroid dehydrogenase activity, acting on the CH-CH group of donors","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0033765","terms_by_termid":{"GO:0003865":null}}


id: PBO:0066591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member F, filopodia associated","termid":"PBO:0066591"}


id: PR:Q9Y7T3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA(His) guanylyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04473","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA(His) guanylyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC63.07","secondary_identifiers":["UniProtKB:Q9Y7T3"],"synonyms":[{"name":"Spom972h-THG1L","type":"exact"},{"name":"tRNA-histidine guanylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7T3"}


id: PBO:0110491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L28 pseudogene 6","termid":"PBO:0110491"}


id: GO:0120083
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A subcompartment of the rough endoplasmic reticulum consisting of lumenal expansion into a flattened, disc-shaped cavity.","definition_xrefs":["GOC:sl","PMID:12112448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"endoplasmic reticulum cisternal network","termid":"GO:0071781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005783","GO:0005575"],"is_obsolete":false,"name":"rough endoplasmic reticulum cisterna","termid":"GO:0120083"}


id: PBO:0051363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3-20","termid":"PBO:0051363"}


id: GO:0004088
data:
  {"annotated_genes":["SJAG_00964","SJAG_00412","SJAG_00392"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89475,102565,107139],"is_not":false,"summary":null,"term":"GO:0004088"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 ATP + L-glutamine + CO2 + H2O = 2 ADP + phosphate + glutamate + carbamoyl phosphate.","definition_xrefs":["EC:6.3.5.5","RHEA:18633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","termid":"GO:0016884"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00412":null,"SJAG_00964":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:CARBPSYN-RXN","Reactome:R-HSA-73577"],"synonyms":[{"name":"CPS activity","type":"related"},{"name":"GD-CPSase activity","type":"related"},{"name":"carbamoyl phosphate synthase (glutamine-hydrolyzing) activity","type":"exact"},{"name":"carbamoyl phosphate synthetase activity","type":"related"},{"name":"carbamoyl-phosphate synthase (glutamine-hydrolysing) activity","type":"related"},{"name":"carbamoyl-phosphate synthetase (glutamine-hydrolysing) activity","type":"related"},{"name":"carbamoyl-phosphate synthetase (glutamine-hydrolyzing) activity","type":"related"},{"name":"carbamoylphosphate synthetase II activity","type":"related"},{"name":"carbamyl phosphate synthetase (glutamine) activity","type":"related"},{"name":"carbon-dioxide::L-glutamine amido-ligase (ADP-forming, carbamate-phosphorylating) activity","type":"related"},{"name":"glutamine-dependent carbamoyl-phosphate synthase activity","type":"related"},{"name":"glutamine-dependent carbamyl phosphate synthetase activity","type":"related"},{"name":"hydrogen-carbonate:L-glutamine amido-ligase (ADP-forming, carbamate-phosphorylating) activity","type":"related"}],"termid":"GO:0004088","terms_by_termid":{"GO:0004088":null}}


id: PBO:0033825
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae MIM1","termid":"PBO:0033825"}


id: SO:0002052
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant where the mutated gene product adversely affects the other (wild type) gene product.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_abnormal","termid":"SO:0002218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dominant_negative_variant","synonyms":[{"name":"dominant negative","type":"exact"},{"name":"dominant negative variant","type":"exact"}],"termid":"SO:0002052"}


id: GO:0106217
data:
  {"annotated_genes":["SJAG_04453","SJAG_00499"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102815,106211],"is_not":false,"summary":null,"term":"GO:0106217"}]},"cv_name":"biological_process","definition":"The process whereby a cytosine in a tRNA is methylated at position 3 of the cytosine.","definition_xrefs":["PMID:28655767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methylation","termid":"GO:0030488"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00499":null,"SJAG_04453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"tRNA C3-cytosine methylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106217","terms_by_termid":{"GO:0106217":null}}


id: GO:0004355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 L-glutamate + NADP+ = 2-oxoglutarate + L-glutamine + H+ + NADPH. This is a two-step reaction: (a) L-glutamate + NH3 = L-glutamine + H2O, (b) L-glutamate + NADP+ + H2O = NH3 + 2-oxoglutarate + NADPH + H+.","definition_xrefs":["EC:1.4.1.13","RHEA:15501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate synthase activity, NAD(P)H as acceptor","termid":"GO:0045181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"glutamate synthase (NADPH) activity","secondary_identifiers":["KEGG_REACTION:R00114","MetaCyc:GLUTSYN-PWY","MetaCyc:GLUGLNSYN-PWY","MetaCyc:GLUTAMATESYN-RXN"],"synonyms":[{"name":"GOGAT activity","type":"broad"},{"name":"L-glutamate synthase activity","type":"broad"},{"name":"L-glutamate synthetase activity","type":"broad"},{"name":"L-glutamate:NADP+ oxidoreductase (transaminating)","type":"related"},{"name":"L-glutamine:2-oxoglutarate aminotransferase, NADPH oxidizing activity","type":"related"},{"name":"NADPH GOGAT","type":"exact"},{"name":"NADPH-dependent glutamate synthase activity","type":"related"},{"name":"NADPH-glutamate synthase activity","type":"related"},{"name":"NADPH-linked glutamate synthase","type":"related"},{"name":"glutamate (reduced nicotinamide adenine dinucleotide phosphate) synthase activity","type":"related"},{"name":"glutamate synthetase (NADP) activity","type":"related"},{"name":"glutamine amide-2-oxoglutarate aminotransferase (oxidoreductase, NADP) activity","type":"related"},{"name":"glutamine-ketoglutaric aminotransferase activity","type":"related"}],"termid":"GO:0004355"}


id: PBO:0074097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 11","termid":"PBO:0074097"}


id: GO:1990303
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ubiquitin ligase complex consisting of UBR1 and RAD6 components. It polyubiquitinates proteins containing non-acetylated N-terminal residues causing their subsequent degradation by the proteasome as part of the Ac/N-End Rule pathway. It recognizes non-acetylated N-terminal methionine if it is followed by a hydrophobic residue. Additionally, it acts in an N-end rule independent manner as a component of a novel quality control pathway for proteins synthesized on cytosolic ribosomes.","definition_xrefs":["PMID:19531475","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"UBR1-RAD6 ubiquitin ligase complex","synonyms":[{"name":"UBR1-RAD6 complex","type":"exact"}],"termid":"GO:1990303"}


id: PBO:0002339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine hydroxylase Scs7","termid":"PBO:0002339"}


id: PBO:0027689
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_branched,_curved,_elongated_cell","termid":"PBO:0027689"}


id: GO:0071837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an HMG box domain, a protein domain that consists of three helices in an irregular array. HMG-box domains are found in one or more copies in HMG-box proteins, which form a large, diverse family involved in the regulation of DNA-dependent processes such as transcription, replication, and strand repair, all of which require the bending and unwinding of chromatin.","definition_xrefs":["PMID:18445004","GOC:yaf","InterPro:IPR009071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"HMG box domain binding","termid":"GO:0071837"}


id: GO:0005635
data:
  {"annotated_genes":["SJAG_05196","SJAG_01014","SJAG_03508","SJAG_03986","SJAG_01745","SJAG_03491","SJAG_03892","SJAG_03251","SJAG_03662","SJAG_01410","SJAG_04191","SJAG_01538","SJAG_00298","SJAG_04969","SJAG_00968","SJAG_03182","SJAG_00810","SJAG_02425","SJAG_00941","SJAG_03729","SJAG_00946","SJAG_01242","SJAG_01374","SJAG_03795","SJAG_00205","SJAG_05740","SJAG_03470","SJAG_03847","SJAG_02655","SJAG_04489","SJAG_03850","SJAG_02757","SJAG_01695","SJAG_00790","SJAG_03103","SJAG_04284","SJAG_02815","SJAG_04472","SJAG_04884","SJAG_03657","SJAG_04480","SJAG_00521","SJAG_01356","SJAG_00375","SJAG_01833","SJAG_01263","SJAG_01013","SJAG_04379","SJAG_04394","SJAG_01131","SJAG_03837","SJAG_04783","SJAG_04578","SJAG_03715","SJAG_02998","SJAG_03592","SJAG_01143","SJAG_03125","SJAG_00753","SJAG_05226","SJAG_02274","SJAG_00900","SJAG_04411","SJAG_03783","SJAG_01737","SJAG_03803","SJAG_00416","SJAG_01584","SJAG_03836","SJAG_04721","SJAG_03593","SJAG_03907","SJAG_01293","SJAG_02661","SJAG_03891","SJAG_00680","SJAG_03693","SJAG_03525","SJAG_01722","SJAG_03281","SJAG_00641","SJAG_01909","SJAG_04017","SJAG_00586","SJAG_00093","SJAG_01358","SJAG_04464","SJAG_05243","SJAG_03989","SJAG_02094","SJAG_04148","SJAG_02210","SJAG_02520","SJAG_01065","SJAG_04187","SJAG_03200","SJAG_04645","SJAG_04429","SJAG_03449","SJAG_01422","SJAG_01581","SJAG_00471","SJAG_02980","SJAG_03227","SJAG_04366","SJAG_01834","SJAG_04841","SJAG_02514","SJAG_02885","SJAG_01083","SJAG_01460","SJAG_02214","SJAG_03300","SJAG_03448","SJAG_01227","SJAG_00840","SJAG_05207","SJAG_00479","SJAG_01981","SJAG_00762","SJAG_05303","SJAG_03299","SJAG_03812","SJAG_04558","SJAG_03959","SJAG_04888","SJAG_02424","SJAG_01789","SJAG_00054","SJAG_01185","SJAG_01534","SJAG_04010","SJAG_02337","SJAG_02248","SJAG_03321","SJAG_00962","SJAG_00178","SJAG_04319"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84191,84919,85059,85146,85490,85610,86188,86244,86474,86997,87130,87386,87413,87761,87776,87970,89102,89259,89448,89503,90042,90054,90708,91029,91447,91820,92183,92290,92567,93347,93764,94716,95112,95886,95887,96469,96654,98018,98615,98808,98877,99055,99205,99440,99518,99724,99943,100004,100175,100267,100387,100780,100933,101078,101422,101990,102170,102195,102602,102980,103021,103122,103590,103821,104161,104253,104519,104652,104684,104715,104743,105182,105634,105905,105955,106512,109287,109307,109590,110517,110961,111030,111051,111220,111576,111821,111892,112219,112533,113106,113331,113458,113564,113741,114648,114758,115479,115481,115489],"is_not":false,"summary":null,"term":"GO:0005635"},{"annotations":[108898,98872,92775],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034993"},{"annotations":[114226],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034992"},{"annotations":[110771,84025,94018,99793,96945],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0180028"},{"annotations":[115627],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120321"},{"annotations":[99470,101991,114228,85137,87387,89893,98878,113624],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005637"},{"annotations":[84592,115536,86475,92777,87762,87558,96655,85138,87988,114229,85491,60112,110962,85067,87388,106910,99519,86998,115534,85569,89140],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031965"},{"annotations":[113625,101992],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990862"},{"annotations":[84593],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005640"},{"annotations":[96470,100006,99667,112489,115675,115679,115557,97207,89485,87000,99520,102197,103818,111578,99726,115294,83449,99056,104745,115636,87764,105907,115637,85069,87972,86189,98019,109592,92184,107808,85482,91031,101101,106478,112535,115674,87132,111052,112108,103822,101785,90044,85060,101424,105637,109308,110952,85892,113459,94000,115673],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005643"},{"annotations":[102198,87765,90045,91032,85492,97446],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044613"},{"annotations":[99057,104746,85070,90046],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044614"},{"annotations":[96471,97208,112536],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044611"},{"annotations":[99058],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044612"},{"annotations":[91033,85061,111614,110953,112490,87766],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044615"},{"annotations":[94001,105908,106479,109309,87919,85483,85071,87001,101425,102611],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031080"},{"annotations":[86190,103823,115198],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070762"},{"annotations":[98880,92778],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990612"}]},"cv_name":"cellular_component","definition":"The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space).","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle envelope","termid":"GO:0031967"},{"relation_name":"part_of","term_name":"nucleus","termid":"GO:0005634"},{"relation_name":"part_of","term_name":"endomembrane system","termid":"GO:0012505"}],"gene_count":138,"genes_by_uniquename":{"SJAG_00054":null,"SJAG_00093":null,"SJAG_00178":null,"SJAG_00205":null,"SJAG_00298":null,"SJAG_00375":null,"SJAG_00416":null,"SJAG_00471":null,"SJAG_00479":null,"SJAG_00521":null,"SJAG_00586":null,"SJAG_00641":null,"SJAG_00680":null,"SJAG_00753":null,"SJAG_00762":null,"SJAG_00790":null,"SJAG_00810":null,"SJAG_00840":null,"SJAG_00900":null,"SJAG_00941":null,"SJAG_00946":null,"SJAG_00962":null,"SJAG_00968":null,"SJAG_01013":null,"SJAG_01014":null,"SJAG_01065":null,"SJAG_01083":null,"SJAG_01131":null,"SJAG_01143":null,"SJAG_01185":null,"SJAG_01227":null,"SJAG_01242":null,"SJAG_01263":null,"SJAG_01293":null,"SJAG_01356":null,"SJAG_01358":null,"SJAG_01374":null,"SJAG_01410":null,"SJAG_01422":null,"SJAG_01460":null,"SJAG_01534":null,"SJAG_01538":null,"SJAG_01581":null,"SJAG_01584":null,"SJAG_01695":null,"SJAG_01722":null,"SJAG_01737":null,"SJAG_01745":null,"SJAG_01789":null,"SJAG_01833":null,"SJAG_01834":null,"SJAG_01909":null,"SJAG_01981":null,"SJAG_02094":null,"SJAG_02210":null,"SJAG_02214":null,"SJAG_02248":null,"SJAG_02274":null,"SJAG_02337":null,"SJAG_02424":null,"SJAG_02425":null,"SJAG_02514":null,"SJAG_02520":null,"SJAG_02655":null,"SJAG_02661":null,"SJAG_02757":null,"SJAG_02815":null,"SJAG_02885":null,"SJAG_02980":null,"SJAG_02998":null,"SJAG_03103":null,"SJAG_03125":null,"SJAG_03182":null,"SJAG_03200":null,"SJAG_03227":null,"SJAG_03251":null,"SJAG_03281":null,"SJAG_03299":null,"SJAG_03300":null,"SJAG_03321":null,"SJAG_03448":null,"SJAG_03449":null,"SJAG_03470":null,"SJAG_03491":null,"SJAG_03508":null,"SJAG_03525":null,"SJAG_03592":null,"SJAG_03593":null,"SJAG_03657":null,"SJAG_03662":null,"SJAG_03693":null,"SJAG_03715":null,"SJAG_03729":null,"SJAG_03783":null,"SJAG_03795":null,"SJAG_03803":null,"SJAG_03812":null,"SJAG_03836":null,"SJAG_03837":null,"SJAG_03847":null,"SJAG_03850":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_03907":null,"SJAG_03959":null,"SJAG_03986":null,"SJAG_03989":null,"SJAG_04010":null,"SJAG_04017":null,"SJAG_04148":null,"SJAG_04187":null,"SJAG_04191":null,"SJAG_04284":null,"SJAG_04319":null,"SJAG_04366":null,"SJAG_04379":null,"SJAG_04394":null,"SJAG_04411":null,"SJAG_04429":null,"SJAG_04464":null,"SJAG_04472":null,"SJAG_04480":null,"SJAG_04489":null,"SJAG_04558":null,"SJAG_04578":null,"SJAG_04645":null,"SJAG_04721":null,"SJAG_04783":null,"SJAG_04841":null,"SJAG_04884":null,"SJAG_04888":null,"SJAG_04969":null,"SJAG_05196":null,"SJAG_05207":null,"SJAG_05226":null,"SJAG_05243":null,"SJAG_05303":null,"SJAG_05740":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"nuclear envelope","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21733045":null,"PMID:21802294":null,"PMID:24184107":null,"PMID:28954740":null,"PMID:32109380":null,"PMID:32243490":null,"PMID:33495454":null},"secondary_identifiers":["GO:0005636","Wikipedia:Nuclear_envelope"],"termid":"GO:0005635","terms_by_termid":{"GO:0000093":null,"GO:0005635":null,"GO:0005637":null,"GO:0005640":null,"GO:0005643":null,"GO:0031080":null,"GO:0031965":null,"GO:0034992":null,"GO:0034993":null,"GO:0044611":null,"GO:0044612":null,"GO:0044613":null,"GO:0044614":null,"GO:0044615":null,"GO:0070762":null,"GO:0120321":null,"GO:0180028":null,"GO:1990612":null,"GO:1990862":null}}


id: PBO:0088745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc chaperone Zng1","termid":"PBO:0088745"}


id: PBO:0047269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 247 member A","termid":"PBO:0047269"}


id: PBO:0071576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35 pseudogene 5","termid":"PBO:0071576"}


id: PBO:0074522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A14","termid":"PBO:0074522"}


id: PR:Q96WW6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An alpha-1,3/1,6-mannosyltransferase ALG2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12526:SF22","OMA:SCHPO02884","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,3/1,6-mannosyltransferase alg2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11B10.01","secondary_identifiers":["UniProtKB:Q96WW6"],"synonyms":[{"name":"GDP-Man:Man(1)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GDP-Man:Man(1)GlcNAc(2)-PP-dolichol mannosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GDP-Man:Man(2)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ALG2","type":"exact"},{"name":"asparagine-linked glycosylation protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q96WW6"}


id: PR:P23880
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sds21 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P23880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein phosphatase PP1-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC31H12.05c","synonyms":[{"name":"Spom972h-sds21","type":"exact"},{"name":"suppressor protein SDS21 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P23880"}


id: PBO:0001733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal-ubiquitin fusion protein","termid":"PBO:0001733"}


id: PBO:0109516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2879","termid":"PBO:0109516"}


id: GO:0002103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Endonucleolytic cleavage of a pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 4.5S rRNA, and the 5S rRNA in that order from 5' to 3' along the primary transcript. Primary ribosomal RNA transcripts with four genes, in this order, are produced in the chloroplasts of vascular plants. Note that the use of the word tetracistronic refers only to the number of mature rRNA molecules which will be produced from the primary transcript and ignores tRNAs that may also be present within the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0042254","GO:0044085","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)","termid":"GO:0002103"}


id: GO:0140082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Isoenergetic transfer of SUMO from one protein to an existing ubiquitin chain via the reaction X-ubiquitin + Y-ubiquitin = Y-ubiquitin-ubiquitin + X, where both the X-ubiquitin and Y-ubiquitin-ubiquitin linkages are thioester bonds between the C-terminal glycine of ubiquitin and a sulfhydryl side group of a cysteine residue.","definition_xrefs":["PMID:28552615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SUMO ligase activity","termid":"GO:0061665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0019787","GO:0016746","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"SUMO-ubiquitin ligase activity","termid":"GO:0140082"}


id: GO:0060929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to atrioventricular (AV) node cell fates and their capacity to differentiate into AV node cells.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac pacemaker cell fate commitment","termid":"GO:0060927"},{"relation_name":"part_of","term_name":"atrioventricular node cell differentiation","termid":"GO:0060922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrioventricular node cell fate commitment","synonyms":[{"name":"AV node cell fate commitment","type":"exact"}],"termid":"GO:0060929"}


id: PR:Q9UTC3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication complex GINS protein PSF3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR22768:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication complex GINS protein psf3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.16c","secondary_identifiers":["UniProtKB:Q9UTC3"],"synonyms":[{"name":"SPAC227.16c","type":"related"},{"name":"Spom972h-GINS3","type":"exact"}],"termid":"PR:Q9UTC3"}


id: PBO:0004944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I and III subunit Rpc40","termid":"PBO:0004944"}


id: FYPO:0003680
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing epirubicin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002058","FYPO:0002057","FYPO:0000257","FYPO:0002060","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on epirubicin","synonyms":[{"name":"normal cell population growth in presence of epirubicin","type":"exact"},{"name":"normal cell population growth on 4'-epidoxorubicin","type":"exact"},{"name":"normal cell population growth on epirubicin","type":"exact"},{"name":"normal cellular response to epirubicin","type":"related"},{"name":"normal vegetative cell population growth on epirubicin","type":"exact"}],"termid":"FYPO:0003680"}


id: PBO:0081471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 345","termid":"PBO:0081471"}


id: PBO:0054434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1830","termid":"PBO:0054434"}


id: FYPO:0002887
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the telomere of a chromosome is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"},{"relation_name":"is_a","term_name":"normal protein localization to chromosome","termid":"FYPO:0004997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000138","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to telomere during vegetative growth","synonyms":[{"name":"normal protein localisation to chromosome, telomeric region, during vegetative growth","type":"exact"},{"name":"normal protein localisation to telomere during vegetative growth","type":"exact"},{"name":"normal protein localization to chromosome, telomeric region, during vegetative growth","type":"exact"},{"name":"normal protein localization to telomere during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002887"}


id: PBO:0083497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YJL210W/PEX2","termid":"PBO:0083497"}


id: PBO:0054130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1496","termid":"PBO:0054130"}


id: PBO:0053282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lens intrinsic membrane protein 2","termid":"PBO:0053282"}


id: PBO:0077734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tensin 2","termid":"PBO:0077734"}


id: PBO:0034304
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-develops_into","termid":"PBO:0034304"}


id: FYPO:0003242
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mRNA splicing via the spliceosome is decreased, where introns have low A/U content.","definition_xrefs":["PomBase:mah","PMID:23754748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mRNA splicing, via spliceosome, intron-specific","termid":"FYPO:0003244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0000294","FYPO:0001985"],"is_obsolete":false,"name":"decreased splicing of mRNA introns with low A/U content","synonyms":[{"name":"decreased mRNA splicing, via spliceosome, introns with low A/U content","type":"exact"},{"name":"decreased nuclear mRNA splicing, via spliceosome, introns with low A/U content","type":"exact"},{"name":"decreased splicing of mRNA introns with low A/U content","type":"broad"},{"name":"decreased splicing of mRNA introns with low A/U content during mitotic cell cycle","type":"related"},{"name":"decreased splicing of mRNA introns with low A/U content during vegetative growth","type":"exact"},{"name":"reduced splicing of mRNA introns with low A/U content","type":"exact"}],"termid":"FYPO:0003242"}


id: GO:0048019
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The activity of a gene product that interacts with a receptor to decrease the ability of the receptor agonist to bind and activate the receptor.","definition_xrefs":["ISBN:0198506732","GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"},{"relation_name":"is_a","term_name":"signaling receptor inhibitor activity","termid":"GO:0030547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0098772","GO:0140678","GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"receptor antagonist activity","synonyms":[{"name":"receptor ligand activity","type":"broad"}],"termid":"GO:0048019"}


id: PBO:0026642
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_cell_cycle_regulated_gene_mRNA_during_vegetative_growth","termid":"PBO:0026642"}


id: PBO:0058926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA let-7e","termid":"PBO:0058926"}


id: GO:0002074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the extraocular skeletal muscle over time, from its formation to the mature structure. The extraocular muscle is derived from cranial mesoderm and controls eye movements. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle. An example of this process is found in Mus musculus.","definition_xrefs":["GOC:mtg_sensu","MA:0001271","GOC:dph","PMID:16638982","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle tissue development","termid":"GO:0007519"},{"relation_name":"is_a","term_name":"skeletal muscle organ development","termid":"GO:0060538"},{"relation_name":"part_of","term_name":"camera-type eye development","termid":"GO:0043010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"extraocular skeletal muscle development","termid":"GO:0002074"}


id: GO:0102950
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-acetate + L-valine + ATP = H+ + indole-3-acetyl-valine + AMP + diphosphoric acid.","definition_xrefs":["EC:6.3.-.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"indole-3-acetyl-valine synthetase activity","secondary_identifiers":["MetaCyc:RXN-9083"],"termid":"GO:0102950"}


id: PBO:0005495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP endonuclease Apn1","termid":"PBO:0005495"}


id: GO:0038110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-2 binding to its receptor on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:nhn","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to interleukin-2","termid":"GO:0071352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"interleukin-2-mediated signaling pathway","synonyms":[{"name":"IL-2-mediated signaling pathway","type":"exact"},{"name":"interleukin-2-mediated signalling pathway","type":"exact"}],"termid":"GO:0038110"}


id: PBO:0048490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCSH pseudogene 2","termid":"PBO:0048490"}


id: PBO:0003500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylamidoimidazolesuccinocarboxamide synthase, SAICAR synthetase, Ade7","termid":"PBO:0003500"}


id: GO:0032793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of activity of the transcription factor CREB.","definition_xrefs":["GOC:tb","GOC:ecd","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-binding transcription factor activity","termid":"GO:0051091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0008150","GO:0006355"],"is_obsolete":false,"name":"positive regulation of CREB transcription factor activity","synonyms":[{"name":"CREB activator","type":"related"},{"name":"activation of CREB","type":"exact"},{"name":"activation of CREB transcription factor","type":"exact"}],"termid":"GO:0032793"}


id: PBO:0062591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily J member 1","termid":"PBO:0062591"}


id: SO:0001829
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A contig composed of mRNA_reads.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"contig","termid":"SO:0000149"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA_contig","synonyms":[{"name":"mRNA contig","type":"related"}],"termid":"SO:0001829"}


id: GO:0001578
data:
  {"annotated_genes":["SJAG_03264","SJAG_01546","SJAG_04566","SJAG_02624","SJAG_04841","SJAG_01613","SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92836,93352,95285,97490,108825,108835,114208],"is_not":false,"summary":null,"term":"GO:0001578"}]},"cv_name":"biological_process","definition":"A process that results in a parallel arrangement of microtubules.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01546":null,"SJAG_01613":null,"SJAG_02624":null,"SJAG_03073":null,"SJAG_03264":null,"SJAG_04566":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0000226","GO:0007010"],"is_obsolete":false,"name":"microtubule bundle formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"microtubule bundling","type":"exact"}],"termid":"GO:0001578","terms_by_termid":{"GO:0001578":null}}


id: PR:O43028
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vac8 gene.","definition_xrefs":["UniProtKB:O43028","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC354.14c","synonyms":[{"name":"Spom972h-vac8","type":"exact"}],"termid":"PR:O43028"}


id: PBO:0089834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L33","termid":"PBO:0089834"}


id: PBO:0082797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the yeast dynactin complex; consisting of Nip100p, Jnm1p, and Arp1p; required for proper nuclear migration and spindle partitioning during mitotic anaphase B","termid":"PBO:0082797"}


id: PBO:0034735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil protein involved in septum formation Rng10","termid":"PBO:0034735"}


id: PBO:0083889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG-nucleoporin component of central core of nuclear pore complex (NPC); contributes directly to nucleocytoplasmic transport; induces membrane tubulation, which may contribute to nuclear pore assembly; ASM4 has a paralog, NUP53, that arose from the whole genome duplication","termid":"PBO:0083889"}


id: GO:0051216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a cartilage element over time, from its formation to the mature structure. Cartilage elements are skeletal elements that consist of connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate.","definition_xrefs":["GOC:cjm","PMID:23251424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"skeletal system development","termid":"GO:0001501"},{"relation_name":"part_of","term_name":"connective tissue development","termid":"GO:0061448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cartilage development","secondary_identifiers":["Wikipedia:Chondrogenesis"],"synonyms":[{"name":"cartilage biogenesis","type":"exact"},{"name":"cartilage biosynthesis","type":"exact"},{"name":"cartilage element development","type":"exact"},{"name":"cartilage formation","type":"exact"},{"name":"cartilage organ development","type":"exact"},{"name":"chondrogenesis","type":"exact"}],"termid":"GO:0051216"}


id: PBO:0042061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 124","termid":"PBO:0042061"}


id: PBO:0033804
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_mitotic_G1_cell_cycle_arrest_in_response_to_nitrogen_starvation","termid":"PBO:0033804"}


id: FYPO:0005147
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a proteasome to the nuclear periphery is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus during vegetative growth","termid":"FYPO:0001424"},{"relation_name":"is_a","term_name":"abnormal protein localization to nuclear periphery","termid":"FYPO:0002338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abolished proteasome localization to nuclear periphery","synonyms":[{"name":"abolished proteasome localisation to nuclear periphery","type":"exact"},{"name":"abolished proteasome localization to nuclear periphery during mitotic cell cycle","type":"related"},{"name":"abolished proteasome localization to nuclear periphery during vegetative growth","type":"exact"},{"name":"proteasome localization to nuclear periphery abolished","type":"exact"}],"termid":"FYPO:0005147"}


id: GO:0044002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that begins with the production and formation of structures and molecules in an organism that are required for the acquisition and utilization of nutrients from its host organism, and the ends with the acquirement of the nutrients. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interaction with host","termid":"GO:0051701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acquisition of nutrients from host","termid":"GO:0044002"}


id: _global:trans_spliced_to
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans_spliced_to","termid":"_global:trans_spliced_to"}


id: GO:0010114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a red light stimulus. Red light is electromagnetic radiation of wavelength of 580-700nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.","definition_xrefs":["GOC:mtg_far_red","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to red or far red light","termid":"GO:0009639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to red light","synonyms":[{"name":"response to red light stimulus","type":"exact"}],"termid":"GO:0010114"}


id: PBO:0064077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 111","termid":"PBO:0064077"}


id: GO:0099175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the physical form of a postsynapse.","definition_xrefs":["GOC:tb","GOC:ai","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse organization","termid":"GO:0050807"},{"relation_name":"regulates","term_name":"postsynapse organization","termid":"GO:0099173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of postsynapse organization","synonyms":[{"name":"regulation of postsynapse organisation","type":"exact"},{"name":"regulation of postsynapse organization and biogenesis","type":"related"},{"name":"regulation of postsynapse structure","type":"exact"}],"termid":"GO:0099175"}


id: FYPO:0002977
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at promoters that contain MCB sites is increased during a cellular response to hydroxyurea.","definition_xrefs":["PMID:24006488","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin at MCB promoters during vegetative growth","termid":"FYPO:0006740"},{"relation_name":"is_a","term_name":"increased protein localization to chromatin during cellular response to hydroxyurea","termid":"FYPO:0007551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to chromatin at MCB promoters during cellular response to hydroxyurea","synonyms":[{"name":"increased protein localisation to chromatin at MCB promoters during cellular response to hydroxyurea","type":"exact"},{"name":"increased protein localization to chromatin at MCB promoters during cellular response to HU","type":"exact"},{"name":"increased protein localization to chromatin at MCB promoters during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at MCB promoters during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"increased protein localization to chromatin at MCB target genes during cellular response to hydroxyurea","type":"related"},{"name":"increased protein localization to chromatin at MCB-containing promoters during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0002977"}


id: GO:0061252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a mesonephric glomerular epithelial cell. Mesonephric glomerular epithelial cells are specialized epithelial cells that form part of the mesonephric glomerulus; there are two types, mesonephric glomerular parietal epithelial cells and mesonephric glomerular visceral epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular epithelial cell fate commitment","termid":"GO:0072314"},{"relation_name":"part_of","term_name":"mesonephric glomerular epithelial cell differentiation","termid":"GO:0061250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerular epithelial cell fate commitment","termid":"GO:0061252"}


id: PBO:0051862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster assembly 2 pseudogene 1","termid":"PBO:0051862"}


id: GO:0048406
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to nerve growth factor (NGF).","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotrophin binding","termid":"GO:0043121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"nerve growth factor binding","synonyms":[{"name":"NGF binding","type":"exact"},{"name":"beta-nerve growth factor binding","type":"exact"},{"name":"neurotrophin TRKA receptor activity","type":"related"}],"termid":"GO:0048406"}


id: PBO:0059475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesothelin","termid":"PBO:0059475"}


id: PBO:0092010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNA binding endonuclease Cox1-I1b (intron-encoded)","termid":"PBO:0092010"}


id: PBO:0062466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 157 pseudogene","termid":"PBO:0062466"}


id: PBO:0081950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc and ring finger 3","termid":"PBO:0081950"}


id: PBO:0085871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; homologous to the medium chain of mammalian clathrin-associated protein complex; involved in vesicular transport","termid":"PBO:0085871"}


id: PBO:0031089
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_manganese_depletion","termid":"PBO:0031089"}


id: PBO:0081025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 7A","termid":"PBO:0081025"}


id: GO:0010379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phaseic acid (PA), a catabolite of the plant hormone abscisic acid (ABA).","definition_xrefs":["BioCyc:PWY-5271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid biosynthetic process","termid":"GO:0016106"},{"relation_name":"is_a","term_name":"apocarotenoid biosynthetic process","termid":"GO:0043289"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phaseic acid biosynthetic process","secondary_identifiers":["MetaCyc:PWY-5271"],"termid":"GO:0010379"}


id: GO:0102700
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate(3-) = alpha-thujene + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:4.2.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"alpha-thujene synthase activity","secondary_identifiers":["MetaCyc:RXN-5105"],"termid":"GO:0102700"}


id: GO:0015423
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + maltose(out) = ADP + phosphate + maltose(in).","definition_xrefs":["RHEA:22132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maltose transmembrane transporter activity","termid":"GO:0005363"},{"relation_name":"is_a","term_name":"ABC-type oligosaccharide transporter activity","termid":"GO:0015422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ABC-type maltose transporter activity","secondary_identifiers":["EC:7.5.2.1","MetaCyc:ABC-16-RXN"],"synonyms":[{"name":"ABC-type maltose transporter","type":"exact"},{"name":"ATP-dependent maltose transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled maltose transmembrane transporter activity","type":"related"},{"name":"maltooligosaccharide-importing ATPase activity","type":"related"},{"name":"maltose ABC transporter","type":"exact"},{"name":"maltose-transporting ATPase activity","type":"related"}],"termid":"GO:0015423"}


id: PBO:0001139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"checkpoint clamp complex protein Rad9","termid":"PBO:0001139"}


id: PBO:0086544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YDR029W is not an essential gene","termid":"PBO:0086544"}


id: PBO:0060263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myogenic factor 6","termid":"PBO:0060263"}


id: GO:0033075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of isoquinoline alkaloids, alkaloid compounds that contain bicyclic N-containing aromatic rings and are derived from a 3,4-dihydroxytyramine (dopamine) precursor that undergoes a Schiff base addition with aldehydes of different origin.","definition_xrefs":["GOC:mah","PMID:26503307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid biosynthetic process","termid":"GO:0009821"},{"relation_name":"is_a","term_name":"isoquinoline alkaloid metabolic process","termid":"GO:0033076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"isoquinoline alkaloid biosynthetic process","synonyms":[{"name":"ipecac alkaloid biosynthesis","type":"related"},{"name":"isoquinoline alkaloid anabolism","type":"exact"},{"name":"isoquinoline alkaloid biosynthesis","type":"exact"},{"name":"isoquinoline alkaloid formation","type":"exact"},{"name":"isoquinoline alkaloid synthesis","type":"exact"}],"termid":"GO:0033075"}


id: PBO:0015220
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homooligomeric","termid":"PBO:0015220"}


id: PBO:0034715
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cartilage-hair hypoplasia","termid":"PBO:0034715"}


id: GO:1905783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The disaggregation of a CENP-A containing nucleosome into its constituent components.","definition_xrefs":["PMID:27666591","GOC:TermGenie","GO_REF:0000079"],"gene_count":0,"genotype_count":0,"name":"obsolete CENP-A containing nucleosome disassembly (obsolete GO:1905783)","synonyms":[{"name":"centromere specific nucleosome disassembly","type":"related"},{"name":"centromere-specific nucleosome disassembly","type":"related"},{"name":"centromeric nucleosome disassembly","type":"related"}],"termid":"GO:1905783"}


id: PBO:0076796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane epididymal protein 3, pseudogene","termid":"PBO:0076796"}


id: PBO:0030036
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_minichromosome_loss_upon_segregation_during_vegetative_growth","termid":"PBO:0030036"}


id: PBO:0088213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposable element zinc finger related protein","termid":"PBO:0088213"}


id: GO:0098932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption by a symbiont of host cell wall peptidoglycans to allow entry into the host cell.","definition_xrefs":["GOC:dos","VZ:3940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cell wall","termid":"GO:0052009"},{"relation_name":"part_of","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont entry into host cell via disruption of host cell wall peptidoglycan","synonyms":[{"name":"catabolism of host cell wall peptidoglycan by virus","type":"exact"},{"name":"degradation of host cell wall peptidoglycan by virus","type":"exact"},{"name":"degradation of host peptidoglycans during virus entry","type":"exact"},{"name":"disassembly by virus of host cell wall peptidoglycan","type":"exact"},{"name":"disruption by virus of host cell wall peptidoglycan during virus entry","type":"exact"}],"termid":"GO:0098932"}


id: PBO:0031181
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_acid_phosphatase_activity","termid":"PBO:0031181"}


id: GO:0015811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-cystine (also known as dicysteine) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid transport","termid":"GO:0000101"},{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"L-amino acid transport","termid":"GO:0015807"},{"relation_name":"is_a","term_name":"modified amino acid transport","termid":"GO:0072337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"L-cystine transport","termid":"GO:0015811"}


id: FYPO:0004120
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that is smaller than normal, has a septum with abnormal size, shape, or structure, and that undergoes two or more rounds of cell division, and then dies.","definition_xrefs":["PomBase:mah","PMID:15116432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, elongated cell","termid":"FYPO:0002262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001320","FYPO:0000002","FYPO:0000004","FYPO:0001985"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, small cell with abnormal septum morphology","synonyms":[{"name":"inviable after spore germination, multiple cell divisions, small cell with abnormal septum formation","type":"exact"},{"name":"inviable following spore germination, multiple cell divisions, small cell with abnormal septum morphology","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, small cell with abnormal septum morphology","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, small cell with abnormal septum morphology","type":"exact"}],"termid":"FYPO:0004120"}


id: PBO:0072742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A7","termid":"PBO:0072742"}


id: PBO:0031714
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitochondrial_transport","termid":"PBO:0031714"}


id: FYPO:0000740
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of cellular pigment accumulation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular pigment accumulation phenotype","termid":"FYPO:0000739"},{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular pigment accumulation","synonyms":[{"name":"normal cellular pigment accumulation during mitotic cell cycle","type":"related"},{"name":"normal cellular pigment accumulation during vegetative growth","type":"exact"}],"termid":"FYPO:0000740"}


id: FYPO:0009028
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing proline as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002057","FYPO:0005447","FYPO:0000139","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"increased cell population growth on proline nitrogen source","synonyms":[{"name":"increased growth on proline nitrogen source","type":"broad"},{"name":"increased vegetative cell growth on proline nitrogen source","type":"exact"}],"termid":"FYPO:0009028"}


id: PBO:0041727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin dependent protein kinase II delta","termid":"PBO:0041727"}


id: GO:0140495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell migration-dependent mechanism for releasing cellular contents.","definition_xrefs":["PMID:25342562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"export from cell","termid":"GO:0140352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"migracytosis","termid":"GO:0140495"}


id: GO:0033119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of RNA splicing.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"regulation of RNA splicing","termid":"GO:0043484"},{"relation_name":"negatively_regulates","term_name":"RNA splicing","termid":"GO:0008380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of RNA splicing","termid":"GO:0033119"}


id: PBO:0086798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YBR219C is not an essential gene","termid":"PBO:0086798"}


id: PR:O74794
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cyc3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c heme lyase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC26H8.12","synonyms":[{"name":"CCHL (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cyc3","type":"exact"},{"name":"holocytochrome-c synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74794"}


id: PBO:0026697
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_melibiose_carbon_source","termid":"PBO:0026697"}


id: GO:0007150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process whereby cells develop a specific morphology under a specific set of circumstances.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete growth pattern (obsolete GO:0007150)","synonyms":[{"name":"growth pattern","type":"exact"}],"termid":"GO:0007150"}


id: GO:0034440
data:
  {"annotated_genes":["SJAG_00706","SJAG_00413","SJAG_02788"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001561"},{"annotations":[72184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006635"},{"annotations":[88249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019395"}]},"cv_name":"biological_process","definition":"The removal of one or more electrons from a lipid, with or without the concomitant removal of a proton or protons, by reaction with an electron-accepting substance, by addition of oxygen or by removal of hydrogen.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid modification","termid":"GO:0030258"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00413":null,"SJAG_00706":null,"SJAG_02788":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lipid oxidation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0034440","terms_by_termid":{"GO:0001561":null,"GO:0006635":null,"GO:0019395":null}}


id: PBO:0054021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1352","termid":"PBO:0054021"}


id: PBO:0048741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-ammonia ligase pseudogene 3","termid":"PBO:0048741"}


id: GO:0002922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of a humoral immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of humoral immune response","termid":"GO:0002920"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"humoral immune response","termid":"GO:0006959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of humoral immune response","synonyms":[{"name":"activation of humoral immune response","type":"narrow"},{"name":"stimulation of humoral immune response","type":"narrow"},{"name":"up regulation of humoral immune response","type":"exact"},{"name":"up-regulation of humoral immune response","type":"exact"},{"name":"upregulation of humoral immune response","type":"exact"}],"termid":"GO:0002922"}


id: GO:0004787
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: thiamine diphosphate + H2O = thiamine monophosphate + phosphate.","definition_xrefs":["GOC:ai","RHEA:27998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"thiamine diphosphate phosphatase activity","synonyms":[{"name":"TPPase activity","type":"exact"},{"name":"thiamin pyrophosphatase activity","type":"exact"},{"name":"thiamin-pyrophosphatase activity","type":"exact"},{"name":"thiamine diphosphatase activity","type":"broad"},{"name":"thiamine pyrophosphatase activity","type":"exact"},{"name":"thiamine-diphosphatase activity","type":"exact"},{"name":"thiaminpyrophosphatase activity","type":"related"}],"termid":"GO:0004787"}


id: PBO:0017013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial phosphatidate cytidylyltransferase Tam41 (predicted)","termid":"PBO:0017013"}


id: GO:0005559
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete ribozyme (obsolete GO:0005559)","synonyms":[{"name":"ribozyme","type":"exact"}],"termid":"GO:0005559"}


id: PBO:0076886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 37","termid":"PBO:0076886"}


id: GO:1905426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:TermGenie","PMID:17244647","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of Wnt-mediated midbrain dopaminergic neuron differentiation (obsolete GO:1905426)","synonyms":[{"name":"activation of Wg signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"activation of Wg signaling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"activation of Wg signaling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"activation of Wg signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"activation of Wg signaling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"activation of Wg signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"activation of Wg signalling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"activation of Wg signalling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"activation of Wg signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"activation of Wg signalling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"activation of Wingless signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"activation of Wingless signaling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"activation of Wingless signaling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"activation of Wingless signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"activation of Wingless signaling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"activation of Wingless signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"activation of Wingless signalling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"activation of Wingless signalling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"activation of Wingless signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"activation of Wingless signalling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"activation of Wnt receptor signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"activation of Wnt receptor signaling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"activation of Wnt receptor signaling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"activation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"activation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"activation of Wnt receptor signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"activation of Wnt receptor signalling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"activation of Wnt receptor signalling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"activation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"activation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"activation of Wnt signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"activation of Wnt signaling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"activation of Wnt signaling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"activation of Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"activation of Wnt signaling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"activation of Wnt-activated signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"related"},{"name":"activation of Wnt-activated signaling pathway involved in mDA neuron differentiation","type":"related"},{"name":"activation of Wnt-activated signaling pathway involved in midbrain DA neurogenesis","type":"related"},{"name":"activation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"related"},{"name":"activation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron production","type":"related"},{"name":"activation of Wnt-mediated midbrain DA neuron differentiation","type":"narrow"},{"name":"activation of frizzled signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"activation of frizzled signaling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"activation of frizzled signaling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"activation of frizzled signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"activation of frizzled signaling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"activation of frizzled signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"activation of frizzled signalling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"activation of frizzled signalling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"activation of frizzled signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"activation of frizzled signalling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"positive regulation of Wg signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"positive regulation of Wg signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"positive regulation of Wg signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"positive regulation of Wg signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"positive regulation of Wg signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"positive regulation of Wg signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"positive regulation of Wg signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"positive regulation of Wg signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"positive regulation of Wg signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"positive regulation of Wg signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"positive regulation of Wingless signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"positive regulation of Wingless signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"positive regulation of Wingless signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"positive regulation of Wingless signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"positive regulation of Wingless signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"positive regulation of Wingless signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"positive regulation of Wingless signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"positive regulation of Wingless signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"positive regulation of Wingless signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"positive regulation of Wingless signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"positive regulation of Wnt receptor signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"positive regulation of Wnt receptor signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"positive regulation of Wnt receptor signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"positive regulation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"positive regulation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"positive regulation of Wnt receptor signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"positive regulation of Wnt receptor signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"positive regulation of Wnt receptor signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"positive regulation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"positive regulation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"positive regulation of Wnt signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"positive regulation of Wnt signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"positive regulation of Wnt signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"positive regulation of Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"positive regulation of Wnt signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"positive regulation of Wnt-activated signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"related"},{"name":"positive regulation of Wnt-activated signaling pathway involved in mDA neuron differentiation","type":"related"},{"name":"positive regulation of Wnt-activated signaling pathway involved in midbrain DA neurogenesis","type":"related"},{"name":"positive regulation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"related"},{"name":"positive regulation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron production","type":"related"},{"name":"positive regulation of Wnt-mediated midbrain DA neuron differentiation","type":"exact"},{"name":"positive regulation of frizzled signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"positive regulation of frizzled signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"positive regulation of frizzled signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"positive regulation of frizzled signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"positive regulation of frizzled signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"positive regulation of frizzled signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"positive regulation of frizzled signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"positive regulation of frizzled signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"positive regulation of frizzled signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"positive regulation of frizzled signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"positive regulation of midbrain dopaminergic neuron differentiation by positive regulation of Wnt signaling","type":"related"},{"name":"up regulation of Wg signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up regulation of Wg signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up regulation of Wg signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up regulation of Wg signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up regulation of Wg signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up regulation of Wg signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up regulation of Wg signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up regulation of Wg signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up regulation of Wg signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up regulation of Wg signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up regulation of Wingless signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up regulation of Wingless signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up regulation of Wingless signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up regulation of Wingless signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up regulation of Wingless signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up regulation of Wingless signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up regulation of Wingless signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up regulation of Wingless signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up regulation of Wingless signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up regulation of Wingless signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up regulation of Wnt receptor signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up regulation of Wnt receptor signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up regulation of Wnt receptor signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up regulation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up regulation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up regulation of Wnt receptor signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up regulation of Wnt receptor signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up regulation of Wnt receptor signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up regulation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up regulation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up regulation of Wnt signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up regulation of Wnt signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up regulation of Wnt signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up regulation of Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up regulation of Wnt signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up regulation of Wnt-activated signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"related"},{"name":"up regulation of Wnt-activated signaling pathway involved in mDA neuron differentiation","type":"related"},{"name":"up regulation of Wnt-activated signaling pathway involved in midbrain DA neurogenesis","type":"related"},{"name":"up regulation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"related"},{"name":"up regulation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron production","type":"related"},{"name":"up regulation of Wnt-mediated midbrain DA neuron differentiation","type":"exact"},{"name":"up regulation of frizzled signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up regulation of frizzled signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up regulation of frizzled signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up regulation of frizzled signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up regulation of frizzled signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up regulation of frizzled signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up regulation of frizzled signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up regulation of frizzled signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up regulation of frizzled signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up regulation of frizzled signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up-regulation of Wg signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up-regulation of Wg signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up-regulation of Wg signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up-regulation of Wg signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up-regulation of Wg signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up-regulation of Wg signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up-regulation of Wg signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up-regulation of Wg signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up-regulation of Wg signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up-regulation of Wg signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up-regulation of Wingless signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up-regulation of Wingless signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up-regulation of Wingless signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up-regulation of Wingless signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up-regulation of Wingless signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up-regulation of Wingless signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up-regulation of Wingless signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up-regulation of Wingless signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up-regulation of Wingless signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up-regulation of Wingless signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up-regulation of Wnt receptor signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up-regulation of Wnt receptor signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up-regulation of Wnt receptor signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up-regulation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up-regulation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up-regulation of Wnt receptor signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up-regulation of Wnt receptor 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of frizzled signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up-regulation of frizzled signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up-regulation of frizzled signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up-regulation of frizzled signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up-regulation of frizzled signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up-regulation of frizzled signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up-regulation of frizzled signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up-regulation of frizzled signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"upregulation of Wg signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"upregulation of Wg signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"upregulation of Wg signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"upregulation of Wg signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"upregulation of Wg signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"upregulation of Wg signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"upregulation of Wg signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"upregulation of Wg signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"upregulation of Wg signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"upregulation of Wg signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"upregulation of Wingless signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"upregulation of Wingless signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"upregulation of Wingless signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"upregulation of Wingless signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"upregulation of Wingless signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"upregulation of Wingless signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"upregulation of Wingless signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"upregulation of Wingless signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"upregulation of Wingless signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"upregulation of Wingless signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"upregulation of Wnt receptor signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"upregulation of Wnt receptor signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"upregulation of Wnt receptor signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"upregulation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"upregulation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"upregulation of Wnt receptor signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"upregulation of Wnt receptor signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"upregulation of Wnt receptor signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"upregulation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"upregulation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"upregulation of Wnt signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"upregulation of Wnt signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"upregulation of Wnt signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"upregulation of Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"upregulation of Wnt signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"upregulation of Wnt-activated signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"related"},{"name":"upregulation of Wnt-activated signaling pathway involved in mDA neuron differentiation","type":"related"},{"name":"upregulation of Wnt-activated signaling pathway involved in midbrain DA neurogenesis","type":"related"},{"name":"upregulation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"related"},{"name":"upregulation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron production","type":"related"},{"name":"upregulation of Wnt-mediated midbrain DA neuron differentiation","type":"exact"},{"name":"upregulation of frizzled signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"upregulation of frizzled signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"upregulation of frizzled signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"upregulation of frizzled signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"upregulation of frizzled signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"upregulation of frizzled signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"upregulation of frizzled signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"upregulation of frizzled signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"upregulation of frizzled signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"upregulation of frizzled signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"}],"termid":"GO:1905426"}


id: GO:0080160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of selenate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:18761637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"selenate transport","termid":"GO:0080160"}


id: PBO:0068834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 72, pseudogene","termid":"PBO:0068834"}


id: PATO:0001551
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sensitivity of a process which is higher than normal or average.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"sensitivity of a process","termid":"PATO:0001457"},{"relation_name":"is_a","term_name":"increased process quality","termid":"PATO:0002304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased sensitivity of a process","synonyms":[{"name":"high sensitivity of occurrent","type":"exact"},{"name":"increased sensitivity of occurrent","type":"exact"}],"termid":"PATO:0001551"}


id: PBO:0004150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair nuclease Rad13","termid":"PBO:0004150"}


id: PR:O94242
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An aspartate--tRNA ligase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04267","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartate--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC736.06","secondary_identifiers":["UniProtKB:O94242"],"synonyms":[{"name":"AspRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-DARS2","type":"exact"},{"name":"aspartyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94242"}


id: PBO:0042670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule pseudogene 4","termid":"PBO:0042670"}


id: GO:0030431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism enters and maintains a periodic, readily reversible state of reduced awareness and metabolic activity. Usually accompanied by physical relaxation, the onset of sleep in humans and other mammals is marked by a change in the electrical activity of the brain.","definition_xrefs":["ISBN:0192800981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sleep","secondary_identifiers":["Wikipedia:Sleep"],"synonyms":[{"name":"diapause","type":"related"},{"name":"dormancy","type":"related"},{"name":"lethargus","type":"related"}],"termid":"GO:0030431"}


id: PBO:0057640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1231","termid":"PBO:0057640"}


id: PBO:0062847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteocrin","termid":"PBO:0062847"}


id: PBO:0029166
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_phosphorylation","termid":"PBO:0029166"}


id: PR:Q9USQ9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit beta type-4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02584","PANTHER:PTHR11599:SF5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit beta type-7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC577.10","secondary_identifiers":["UniProtKB:Q9USQ9"],"synonyms":[{"name":"Spom972h-PSMB4","type":"exact"}],"termid":"PR:Q9USQ9"}


id: GO:0021646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the vagus nerve. This process pertains to the initial formation of a structure from unspecified parts. This nerve is primarily sensory but also has visceromotor components. It originates in the brain stem and controls many autonomic functions of the heart, lungs, stomach, pharynx, larynx, trachea, esophagus and other gastrointestinal tract components. It controls some motor functions such as speech. The sensory branches mediate sensation from the pharynx, larynx, thorax and abdomen; it also innervates taste buds in the epiglottis.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:cls","GOC:dph","ISBN:0838580343","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"vagus nerve morphogenesis","termid":"GO:0021644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vagus nerve formation","synonyms":[{"name":"CN X biosynthesis","type":"related"},{"name":"CN X formation","type":"related"}],"termid":"GO:0021646"}


id: PBO:0028963
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_meiotic_interphase_before_premeiotic_DNA_replication","termid":"PBO:0028963"}


id: GO:0015985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that provides energy for the synthesis of ATP or GTP.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transport","termid":"GO:1902600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"energy coupled proton transport, down electrochemical gradient","termid":"GO:0015985"}


id: GO:0090657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The telomere maintenance process in which telomeric loops are disassembled to permit efficient telomere replication.","definition_xrefs":["GOC:nc","GOC:BHF_telomere","PMID:22579284","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance","termid":"GO:0000723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0032200","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"telomeric loop disassembly","synonyms":[{"name":"T loop disassembly","type":"exact"},{"name":"t-loop disassembly","type":"exact"}],"termid":"GO:0090657"}


id: PBO:0108942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 21","termid":"PBO:0108942"}


id: PBO:0014294
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of Choline Sensitivity homolog","termid":"PBO:0014294"}


id: GO:0102061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-cis,6-cis-farnesyl diphosphate = (+)-endo-beta-bergamotene + diphosphoric acid.","definition_xrefs":["GOC:pz","RHEA:30467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"endo-beta-bergamotene synthase activity","secondary_identifiers":["EC:4.2.3.53","MetaCyc:RXN-10483"],"synonyms":[{"name":"(+)-endo-beta-bergamotene synthase ((2Z,6Z)-farnesyl diphosphate cyclizing)","type":"exact"},{"name":"(2Z,6Z)-farnesyl diphosphate = (+)-endo-beta-bergamotene","type":"exact"},{"name":"endo-beta-bergamontene synthase activity","type":"exact"}],"termid":"GO:0102061"}


id: PBO:0008888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type m-specific HMG-box transcription factor Mc at silenced MAT3 locus","termid":"PBO:0008888"}


id: GO:0006873
data:
  {"annotated_genes":["SJAG_01007","SJAG_04096","SJAG_02532","SJAG_01817","SJAG_04607","SJAG_01435","SJAG_01669","SJAG_04616","SJAG_02080","SJAG_02470","SJAG_02834","SJAG_04031","SJAG_00923","SJAG_01078","SJAG_04167","SJAG_03850","SJAG_04403","SJAG_01004","SJAG_02883","SJAG_04675","SJAG_00328","SJAG_02847","SJAG_04258","SJAG_04028","SJAG_03866","SJAG_00792","SJAG_03516","SJAG_03862","SJAG_02474","SJAG_04760","SJAG_02457","SJAG_02399","SJAG_04032","SJAG_04677","SJAG_00516","SJAG_00532","SJAG_04867","SJAG_00802","SJAG_02735","SJAG_01397","SJAG_02023","SJAG_02716","SJAG_01694","SJAG_00301","SJAG_02019","SJAG_00668","SJAG_01990","SJAG_03879","SJAG_01400","SJAG_04743","SJAG_04111","SJAG_04892","SJAG_03793","SJAG_01541","SJAG_01353","SJAG_01803","SJAG_00822","SJAG_01129","SJAG_05294","SJAG_02578","SJAG_00136","SJAG_00212","SJAG_03528","SJAG_04757","SJAG_01913","SJAG_04955","SJAG_00222","SJAG_04584","SJAG_03631","SJAG_04698"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90163,96541,99852,90171,88500],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010106"},{"annotations":[87250,86759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032468"},{"annotations":[91747,97073,91516,92871,111630,94391,97686,111150,109423,109990,104718,108404,114635,94174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006874"},{"annotations":[73844,89181,92345,96216,103906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006878"},{"annotations":[85337,96542,73845,92346,109943,90118,89010,88352,100320,103466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006879"},{"annotations":[86281,103638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010961"},{"annotations":[99860,91387,69437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030026"},{"annotations":[92802,85578,93062,91498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030007"},{"annotations":[99861],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006880"},{"annotations":[89825,92250,96217,100374,97284,86507,99638,98836,89826,90780,110404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006882"},{"annotations":[88501,108854,99854,88497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033215"},{"annotations":[96568],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030641"},{"annotations":[83770,94881,83771,109836],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051453"},{"annotations":[61463,61566,106838,106839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033214"},{"annotations":[99975,98042,94974,84108,86223,96074,85913,85384,91717,97694,114789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007035"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of monoatomic ions within a cell. 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id: FYPO:0006057
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which vacuole fusion, the merging of two vacuole membranes to form a single vacuole, is abnormal.","definition_xrefs":["PomBase:mah","GO:0042144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuole organization","termid":"FYPO:0002803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal vacuole fusion","synonyms":[{"name":"abnormal homotypic vacuole fusion","type":"exact"},{"name":"abnormal vacuole fusion, non-autophagic","type":"exact"}],"termid":"FYPO:0006057"}


id: PBO:0087098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal lysine methyltransferase; specific for monomethylation of Rpl42ap and Rpl42bp (lysine 40); nuclear SET domain containing protein; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087098"}


id: PBO:0049278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G1 to S phase transition 1","termid":"PBO:0049278"}


id: PBO:0082409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BET family transcriptional regulator; associates with TFIID, and is involved in transcription initiation at TATA-containing promoters; essential for meiosis and expression of meiosis-specific genes;  binds acetylated histone H4 at double-strand break (DSB) sites, and promotes end resection, loading of RPA and Rad51p and ds break repair by homologous recombination; contains two bromodomains that correspond to the C-terminal region of mammalian TAF1; partially redundant with paralog Bdf2p","termid":"PBO:0082409"}


id: GO:0045133
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,3-dihydroxybenzoate + O2 = 2-hydroxy-3-(3-oxoprop-1-enyl)but-2-enedioate + H+.","definition_xrefs":["EC:1.13.11.14","RHEA:18477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"2,3-dihydroxybenzoate 3,4-dioxygenase activity","secondary_identifiers":["MetaCyc:1.13.11.14-RXN","KEGG_REACTION:R01507"],"synonyms":[{"name":"2,3-dihydroxybenzoate 1,2-dioxygenase activity","type":"related"},{"name":"2,3-dihydroxybenzoate oxygenase activity","type":"related"},{"name":"2,3-dihydroxybenzoate:oxygen 3,4-oxidoreductase (decyclizing)","type":"related"},{"name":"2,3-dihydroxybenzoic oxygenase activity","type":"related"},{"name":"o-pyrocatechuate oxygenase activity","type":"related"}],"termid":"GO:0045133"}


id: GO:0080060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the integument over time, from its formation to the mature structure. Integument is one of the layers of tissue that usually covers the ovule, enveloping the nucellus and forming the micropyle at the apex.","definition_xrefs":["PO:0020021","PMID:19054366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"},{"relation_name":"part_of","term_name":"plant ovule development","termid":"GO:0048481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"integument development","termid":"GO:0080060"}


id: GO:0032184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a polymer of the small ubiquitin-like protein SUMO.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SUMO binding","termid":"GO:0032183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"SUMO polymer binding","synonyms":[{"name":"Smt3 polymer binding","type":"exact"}],"termid":"GO:0032184"}


id: SO:0000295
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A type of spliceosomal intron spliced by the U12 spliceosome, that includes U11, U12, U4atac/U6atac and U5 snRNAs.","definition_xrefs":["PMID:9428511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal_intron","termid":"SO:0000662"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U12_intron","synonyms":[{"name":"U12 intron","type":"exact"},{"name":"U12-dependent intron","type":"exact"}],"termid":"SO:0000295"}


id: PBO:0004007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer epsilon subunit (predicted)","termid":"PBO:0004007"}


id: PBO:0083804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein that binds ribosomal protein L11; required for nuclear export of the 60S pre-ribosomal subunit during ribosome biogenesis; localizes to the nucleolus and in foci along nuclear periphery; cooperates with Ebp2p and Mps3p to mediate telomere clustering by binding Sir4p, but is not involved in telomere tethering; mouse homolog shows altered expression in Huntington's disease model mice","termid":"PBO:0083804"}


id: FYPO:0003111
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ubiquitinyl hydrolase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peptidase activity","termid":"FYPO:0000666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abnormal ubiquitinyl hydrolase activity","termid":"FYPO:0003111"}


id: PBO:0066240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 47","termid":"PBO:0066240"}


id: PBO:0051949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITPKB antisense RNA 1","termid":"PBO:0051949"}


id: GO:0035954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of dipeptide transport by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of dipeptide transport by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0035954)","synonyms":[{"name":"positive regulation of dipeptide transport by activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of dipeptide transport by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of dipeptide transport by stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of dipeptide transport by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of dipeptide transport by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of dipeptide transport by upregulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0035954"}


id: GO:0005880
data:
  {"annotated_genes":["SJAG_02045"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87433],"is_not":false,"summary":null,"term":"GO:0005880"}]},"cv_name":"cellular_component","definition":"Any microtubule in the nucleus of a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule","termid":"GO:0005874"},{"relation_name":"part_of","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02045":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nuclear microtubule","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005880","terms_by_termid":{"GO:0005880":null}}


id: GO:0007405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron.","definition_xrefs":["GOC:mtg_sensu","GOC:sart","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural precursor cell proliferation","termid":"GO:0061351"},{"relation_name":"part_of","term_name":"generation of neurons","termid":"GO:0048699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroblast proliferation","secondary_identifiers":["GO:0043349","GO:0043350"],"termid":"GO:0007405"}


id: GO:0032090
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Pyrin (PAAD/DAPIN) domain, a protein-protein interaction domain that has the same fold as the Death domain.","definition_xrefs":["GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"Pyrin domain binding","synonyms":[{"name":"DAPIN domain binding","type":"exact"},{"name":"PAAD domain binding","type":"exact"}],"termid":"GO:0032090"}


id: PBO:0077446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 179","termid":"PBO:0077446"}


id: GO:0071460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of cell-matrix adhesion.","definition_xrefs":["GOC:sl","PMID:11425869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stimulus","termid":"GO:0051716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cell-matrix adhesion","termid":"GO:0071460"}


id: PBO:0064121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin 2 like 1, transient receptor potential cation channel","termid":"PBO:0064121"}


id: PBO:0043519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrobin, centriole duplication and spindle assembly protein","termid":"PBO:0043519"}


id: GO:0009390
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the formation of dimethyl sulfide from dimethyl sulfoxide.","definition_xrefs":["UM-BBD_enzymeID:r0207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"dimethyl sulfoxide reductase complex","synonyms":[{"name":"dimethyl sulphoxide reductase complex","type":"exact"}],"termid":"GO:0009390"}


id: PBO:0071797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P RNA component H1","termid":"PBO:0071797"}


id: PBO:0075416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated antigen 1","termid":"PBO:0075416"}


id: PBO:0069115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 364, pseudogene","termid":"PBO:0069115"}


id: PBO:0005641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH quinone oxidoreductase/ARE-binding protein (predicted)","termid":"PBO:0005641"}


id: GO:0098772
data:
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regulator","type":"exact"}],"termid":"GO:0098772","terms_by_termid":{"GO:0000774":null,"GO:0001671":null,"GO:0003925":null,"GO:0004857":null,"GO:0004860":null,"GO:0004861":null,"GO:0004862":null,"GO:0004864":null,"GO:0004865":null,"GO:0004866":null,"GO:0004867":null,"GO:0005085":null,"GO:0005092":null,"GO:0005093":null,"GO:0005094":null,"GO:0005095":null,"GO:0005096":null,"GO:0008047":null,"GO:0008073":null,"GO:0008160":null,"GO:0008428":null,"GO:0008597":null,"GO:0010521":null,"GO:0010698":null,"GO:0010856":null,"GO:0016504":null,"GO:0016538":null,"GO:0019210":null,"GO:0019211":null,"GO:0019887":null,"GO:0019888":null,"GO:0019912":null,"GO:0030234":null,"GO:0030291":null,"GO:0030295":null,"GO:0030337":null,"GO:0030414":null,"GO:0030546":null,"GO:0030695":null,"GO:0035014":null,"GO:0042030":null,"GO:0043539":null,"GO:0044692":null,"GO:0055105":null,"GO:0060698":null,"GO:0061133":null,"GO:0061575":null,"GO:0061632":null,"GO:0070917":null,"GO:0072542":null,"GO:0097027":null,"GO:0098744":null,"GO:0098772":null,"GO:0120230":null,"GO:0140656":null,"GO:0140659":null,"GO:0140678":null,"GO:0141106":null,"GO:0170008":null,"GO:0180016":null,"GO:1990609":null,"GO:1990610":null,"GO:1990624":null,"GO:1990757":null,"GO:1990846":null,"GO:1990948":null}}


id: GO:0001736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Coordinated organization of groups of cells in the plane of an epithelium, such that they all orient to similar coordinates.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of tissue polarity","termid":"GO:0007164"},{"relation_name":"part_of","term_name":"morphogenesis of a polarized epithelium","termid":"GO:0001738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of planar polarity","synonyms":[{"name":"establishment of planar cell polarity","type":"narrow"}],"termid":"GO:0001736"}


id: GO:0032449
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex comprising Bcl10, MALT1 and a CARD domain-containing protein (CARD9, CARD10 or CARD11); plays a role in signal transduction during NF-kappaB activation.","definition_xrefs":["PMID:30467369","PMID:12909454"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"CBM complex","synonyms":[{"name":"CARMA1-BCL10-Malt1 complex","type":"exact"}],"termid":"GO:0032449"}


id: GO:1905862
data:
  {"annotated_genes":["SJAG_04677","SJAG_04675"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88495,88499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033573"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of ferroxidase activity.","definition_xrefs":["PMID:16522632","GOC:TermGenie","GOC:bhm","GO_REF:0000088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04675":null,"SJAG_04677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ferroxidase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905862","terms_by_termid":{"GO:0033573":null}}


id: RO:0000080
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between a quality and an independent continuant (the bearer), in which the quality specifically depends on the bearer for its existence","direct_ancestors":[{"relation_name":"is_a","term_name":"inheres_in","termid":"RO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quality_of","termid":"RO:0000080"}


id: GO:0010144
data:
  {"annotated_genes":["SJAG_00707"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107889],"is_not":false,"summary":null,"term":"GO:0010144"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyridoxal phosphate, the active form of vitamin B6, from pyridoxamine.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridoxal 5'-phosphate salvage","termid":"GO:0009443"},{"relation_name":"is_a","term_name":"pyridoxamine metabolic process","termid":"GO:0042818"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00707":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"pyridoxal phosphate biosynthetic process from pyridoxamine","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyridoxal 5'-phosphate salvage from pyridoxamine","type":"exact"},{"name":"pyridoxal phosphate anabolism from pyridoxamine","type":"exact"},{"name":"pyridoxal phosphate formation from pyridoxamine","type":"exact"},{"name":"pyridoxal phosphate synthesis from pyridoxamine","type":"exact"},{"name":"vitamin B6 biosynthesis from pyridoxamine","type":"exact"},{"name":"vitamin B6 biosynthetic process from pyridoxamine","type":"exact"}],"termid":"GO:0010144","terms_by_termid":{"GO:0010144":null}}


id: PBO:0057563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 758","termid":"PBO:0057563"}


id: FYPO:0004025
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of the tubulin poison carbendazim (mecarzole; MBC) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"resistance to carbendazim","synonyms":[{"name":"resistance to MBC","type":"exact"},{"name":"resistance to carbendazim during mitotic cell cycle","type":"related"},{"name":"resistance to carbendazim during vegetative growth","type":"exact"},{"name":"resistance to methyl benzimidazole-2-yl-carbamate","type":"exact"},{"name":"resistance to methylbenzylcarbamylate","type":"exact"},{"name":"resistant to carbendazim","type":"exact"}],"termid":"FYPO:0004025"}


id: GO:0004510
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tryptophan + tetrahydrobiopterin + O2 = 5-hydroxy-L-tryptophan + 4-alpha-hydroxytetrahydrobiopterin + H2O.","definition_xrefs":["EC:1.14.16.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen","termid":"GO:0016714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"tryptophan 5-monooxygenase activity","secondary_identifiers":["Reactome:R-HSA-209828","MetaCyc:TRYPTOPHAN-5-MONOOXYGENASE-RXN","RHEA:16709"],"synonyms":[{"name":"L-tryptophan hydroxylase activity","type":"exact"},{"name":"L-tryptophan,tetrahydrobiopterin:oxygen oxidoreductase (5-hydroxylating)","type":"related"},{"name":"indoleacetic acid-5-hydroxylase activity","type":"related"},{"name":"tryptophan 5-hydroxylase activity","type":"related"},{"name":"tryptophan hydroxylase activity","type":"related"}],"termid":"GO:0004510"}


id: PBO:0074374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG1 divergent transcript","termid":"PBO:0074374"}


id: GO:0046546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the primary male sexual characteristics over time, from their formation to the mature structures. The primary male sexual characteristics are the testes, and they develop in response to sex hormone secretion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"development of primary sexual characteristics","termid":"GO:0045137"},{"relation_name":"part_of","term_name":"male sex differentiation","termid":"GO:0046661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"development of primary male sexual characteristics","termid":"GO:0046546"}


id: PATO:0001168
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of not being harmed or injured or spoiled.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"damage","termid":"PATO:0001020"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"undamaged","termid":"PATO:0001168"}


id: PBO:0044430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily A member 22","termid":"PBO:0044430"}


id: PBO:0068595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 46, pseudogene","termid":"PBO:0068595"}


id: PBO:0059484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSRA divergent transcript","termid":"PBO:0059484"}


id: GO:0060328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The actin filament-based movement by which cytoplasmic actin filaments slide past one another resulting in a contraction that propels the cell in the direction that has been defined as the front of the cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic actin-based contraction involved in cell motility","termid":"GO:0060327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoplasmic actin-based contraction involved in forward cell motility","synonyms":[{"name":"cytoplasmic actin-based contraction involved in forward cell locomotion","type":"related"}],"termid":"GO:0060328"}


id: GO:0000024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the disaccharide maltose (4-O-alpha-D-glucopyranosyl-D-glucopyranose).","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maltose metabolic process","termid":"GO:0000023"},{"relation_name":"is_a","term_name":"disaccharide biosynthetic process","termid":"GO:0046351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"maltose biosynthetic process","synonyms":[{"name":"malt sugar biosynthesis","type":"exact"},{"name":"malt sugar biosynthetic process","type":"exact"},{"name":"maltose anabolism","type":"exact"},{"name":"maltose biosynthesis","type":"exact"},{"name":"maltose formation","type":"exact"},{"name":"maltose synthesis","type":"exact"}],"termid":"GO:0000024"}


id: PBO:0041403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 6 open reading frame 89","termid":"PBO:0041403"}


id: GO:0052664
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a primary nitroalkane + H2O + O2 = an aldehyde + H+ + H2O2 + nitrite; also converts secondary nitroalkanes to a ketone.","definition_xrefs":["EC:1.7.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, oxygen as acceptor","termid":"GO:0016663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"nitroalkane oxidase activity","synonyms":[{"name":"NAO activity","type":"related"},{"name":"nitroalkane reductase activity","type":"related"},{"name":"nitroalkane:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0052664"}


id: PBO:0090196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ksp1","termid":"PBO:0090196"}


id: GO:0036307
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + adenine(2030) in 23S rRNA = S-adenosyl-L-homocysteine + rRNA containing N(6)-methyladenine(2030) in 23S rRNA.","definition_xrefs":["GOC:imk","RHEA:43736","PMID:22847818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (adenine-N6-)-methyltransferase activity","termid":"GO:0008988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0003824","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"23S rRNA (adenine(2030)-N(6))-methyltransferase activity","secondary_identifiers":["EC:2.1.1.266"],"termid":"GO:0036307"}


id: PBO:0041181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin subfamily 3 member A3","termid":"PBO:0041181"}


id: PBO:0066266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 1 member A1","termid":"PBO:0066266"}


id: MOD:01731
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Proteome Sciences TMT6plex-127 reporter+balance group.","definition_xrefs":["Unimod:737#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-127 reporter+balance reagent acylated residue","termid":"MOD:01728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-127 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01731"}


id: FYECO:0000426
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose (typically <2% w/v), salts, water and with lysine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, lysine nitrogen source","synonyms":[{"name":"glucose minimal medium, lysine nitrogen source","type":"exact"},{"name":"standard glucose minimal medium, lysine nitrogen source","type":"related"}],"termid":"FYECO:0000426"}


id: GO:0015216
data:
  {"annotated_genes":["SJAG_00612","SJAG_02050","SJAG_03452","SJAG_00760","SJAG_04328","SJAG_03334","SJAG_04325"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046964"},{"annotations":[97414],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902557"},{"annotations":[102748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008521"},{"annotations":[106953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005471"},{"annotations":[98920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"},{"annotations":[86889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015228"},{"annotations":[111217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001409"},{"annotations":[88956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051724"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a purine nucleotide, any compound consisting of a purine nucleoside esterified with (ortho)phosphate, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide transmembrane transporter activity","termid":"GO:0015215"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00612":null,"SJAG_00760":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_03452":null,"SJAG_04325":null,"SJAG_04328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"purine nucleotide transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015216","terms_by_termid":{"GO:0001409":null,"GO:0005471":null,"GO:0008521":null,"GO:0015228":null,"GO:0046964":null,"GO:0051724":null,"GO:0140987":null,"GO:1902557":null}}


id: GO:0072435
data:
  {"annotated_genes":["SJAG_04332","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90604,98457],"is_not":false,"summary":null,"term":"GO:0072435"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of mitotic G2/M transition DNA damage checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mitotic cell cycle checkpoint signaling","termid":"GO:0072414"},{"relation_name":"is_a","term_name":"response to G2 DNA damage checkpoint signaling","termid":"GO:0072426"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03048":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mitotic G2 DNA damage checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072458"],"synonyms":[{"name":"mitotic G2/M transition DNA damage checkpoint effector process","type":"exact"},{"name":"mitotic G2/M transition decatenation checkpoint effector process","type":"related"},{"name":"response to mitotic G2/M transition DNA damage checkpoint signaling","type":"exact"},{"name":"response to mitotic G2/M transition decatenation checkpoint signaling","type":"related"},{"name":"response to signal involved in mitotic G2/M transition DNA damage checkpoint","type":"exact"},{"name":"response to signal involved in mitotic G2/M transition decatenation checkpoint","type":"related"}],"termid":"GO:0072435","terms_by_termid":{"GO:0072435":null}}


id: PBO:0087806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Targeting subunit for Glc7p protein phosphatase; localized to the bud neck, required for localization of chitin synthase III to the bud neck via interaction with the chitin synthase III regulatory subunit Skt5p; phosphorylation by Slt2p and Kss1p involved in regulating Bni4p in septum assembly","termid":"PBO:0087806"}


id: PR:Q10202
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dbp3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase dbp3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D1.06","synonyms":[{"name":"Spom972h-dbp3","type":"exact"}],"termid":"PR:Q10202"}


id: PBO:0086056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that associates with ribosomes","termid":"PBO:0086056"}


id: PBO:0087819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIID subunit (40 kDa); involved in RNA polymerase II transcription initiation, similar to histone H3 with atypical histone fold motif of Spt3-like transcription factors","termid":"PBO:0087819"}


id: PBO:0046916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 30 member C","termid":"PBO:0046916"}


id: PBO:0043290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain containing 9A","termid":"PBO:0043290"}


id: PBO:0065089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase cAMP-activated catalytic subunit beta","termid":"PBO:0065089"}


id: PBO:0064186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XIIA","termid":"PBO:0064186"}


id: GO:1903184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-dopa.","definition_xrefs":["GOC:TermGenie","GOC:bf","GO_REF:0000068","GOC:PARL","PMID:8822146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"aromatic amino acid metabolic process","termid":"GO:0009072"},{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-dopa metabolic process","synonyms":[{"name":"L-dopa metabolism","type":"exact"}],"termid":"GO:1903184"}


id: PBO:0088338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospho-2-dehydro-3-deoxyheptonate aldolase","termid":"PBO:0088338"}


id: GO:0075076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of the symbiont adenylate cyclase activity, which catalyze the reaction: ATP = 3',5'-cyclic AMP + diphosphate. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont adenylate cyclase activity (obsolete GO:0075076)","termid":"GO:0075076"}


id: PBO:0055034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2449","termid":"PBO:0055034"}


id: GO:0014038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Schwann cell differentiation.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glial cell differentiation","termid":"GO:0045685"},{"relation_name":"regulates","term_name":"Schwann cell differentiation","termid":"GO:0014037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of Schwann cell differentiation","termid":"GO:0014038"}


id: PBO:0002034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA U17","termid":"PBO:0002034"}


id: FYPO:0002238
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing cerulenin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002058","FYPO:0000003","FYPO:0002060","FYPO:0000139","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on cerulenin","synonyms":[{"name":"normal cell population growth in presence of cerulenin","type":"exact"},{"name":"normal cell population growth on cerulenin","type":"exact"},{"name":"normal cellular response to cerulenin","type":"related"},{"name":"normal vegetative cell population growth on cerulenin","type":"exact"}],"termid":"FYPO:0002238"}


id: PR:O43020
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 30S ribosomal protein S16 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein S16, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC354.06","secondary_identifiers":["UniProtKB:O43020"],"synonyms":[{"name":"Spom972h-rpsP","type":"exact"}],"termid":"PR:O43020"}


id: PBO:0083239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; encoded within the 35S rRNA gene on the opposite strand","termid":"PBO:0083239"}


id: GO:0102082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4'-demethylrebeccamycin + S-adenosyl-L-methionine = H+ + rebeccamycin + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.164","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"demethylrebeccamycin--D-glucose O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-10847","RHEA:27353"],"termid":"GO:0102082"}


id: PBO:0059332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S6 pseudogene 1","termid":"PBO:0059332"}


id: PR:G2TRM4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC8E11.12 gene.","definition_xrefs":["UniProtKB:G2TRM4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C8E11.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8E11.12","synonyms":[{"name":"Spom972h-SPAC8E11.12","type":"exact"}],"termid":"PR:G2TRM4"}


id: PBO:0062854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otogelin like","termid":"PBO:0062854"}


id: FYPO:0005743
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of invertase activity (beta-fructofuranosidase activity) is normal (i.e. indistinguishable from wild type) under conditions of glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"normal invertase activity during glucose starvation","synonyms":[{"name":"normal beta-fructofuranosidase activity during glucose starvation","type":"exact"},{"name":"normal invertase activity during cellular response to glucose starvation","type":"exact"},{"name":"normal invertase activity during glucose depletion","type":"exact"},{"name":"normal invertase activity during glucose deprivation","type":"exact"},{"name":"normal invertase activity during glucose limitation","type":"related"}],"termid":"FYPO:0005743"}


id: CHEBI:48775
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadmium(2+)","termid":"CHEBI:48775"}


id: PBO:0086368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative amidase","termid":"PBO:0086368"}


id: PBO:0038666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase long chain family member 1","termid":"PBO:0038666"}


id: PBO:0077612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMSB4X pseudogene 3","termid":"PBO:0077612"}


id: PBO:0057158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miR-302/367 cluster host gene","termid":"PBO:0057158"}


id: FYPO:0002940
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing micafungin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal growth on echinocandin","termid":"FYPO:0004892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000003","FYPO:0002057","FYPO:0000257","FYPO:0000139","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on micafungin","synonyms":[{"name":"normal cell population growth in presence of micafungin","type":"exact"},{"name":"normal cell population growth on micafungin","type":"exact"},{"name":"normal cellular response to micafungin","type":"related"},{"name":"normal vegetative cell population growth on micafungin","type":"exact"}],"termid":"FYPO:0002940"}


id: MOD:00618
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:299#W"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"},{"relation_name":"is_a","term_name":"carboxylated residue","termid":"MOD:01152"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophan carboxylation","synonyms":[{"name":"Carboxy","type":"related"},{"name":"Carboxylation","type":"related"}],"termid":"MOD:00618"}


id: PBO:0004885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amylase homolog Aah4","termid":"PBO:0004885"}


id: PBO:0060029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 17","termid":"PBO:0060029"}


id: PBO:0052888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 9-11, pseudogene","termid":"PBO:0052888"}


id: GO:0021507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining together of the neural folds of the caudal opening of the neural tube. The posterior neuropore appears before the process of neural tube closure is complete.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:dgh","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"is_a","term_name":"cell-cell adhesion involved in neural tube closure","termid":"GO:0060608"},{"relation_name":"part_of","term_name":"neuropore closure","termid":"GO:0021995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"posterior neuropore closure","termid":"GO:0021507"}


id: PBO:0075752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP receptor subunit alpha","termid":"PBO:0075752"}


id: PBO:0028006
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_actomyosin_contractile_ring_contraction","termid":"PBO:0028006"}


id: PBO:0055342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2770","termid":"PBO:0055342"}


id: PBO:0057978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3713","termid":"PBO:0057978"}


id: FYPO:0005938
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at late replication origins is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:24656819","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin at replication origin","termid":"FYPO:0004962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to chromatin at late replication origin","synonyms":[{"name":"normal protein localisation to chromatin at late replication origin","type":"exact"},{"name":"normal protein localization to chromatin at late origin","type":"exact"},{"name":"normal protein localization to chromatin at late replication origin during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at late replication origin during vegetative growth","type":"exact"}],"termid":"FYPO:0005938"}


id: PBO:0061675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 62 C-terminal like","termid":"PBO:0061675"}


id: PBO:0082880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex; role in anaphase progression; Rtt101p-Mms22p ligase associates with replisome complex during S phase via Ctf4p; required for recovery after DSB repair; implicated in Mms22-dependent DNA repair; involved with Mms1p in nonfunctional rRNA decay; modified by the ubiquitin-like protein, Rub1p","termid":"PBO:0082880"}


id: PBO:0088452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain protein Pdp2","termid":"PBO:0088452"}


id: GO:0071762
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of the IgNAR isotype held together by disulfide bonds and lacking immunoglobulin light chains.","definition_xrefs":["PMID:16051357","PMID:12543123","ISBN:0781765196","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex","termid":"GO:0019814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"heavy chain immunoglobulin complex","synonyms":[{"name":"HCab","type":"narrow"},{"name":"Ig NAR immunoglobulin complex","type":"narrow"},{"name":"IgNAR antibody","type":"narrow"},{"name":"IgNAR immunoglobulin complex","type":"narrow"}],"termid":"GO:0071762"}


id: PATO:0001680
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A volume quality inhering in a homogeneous substance containing 6.02 x 1023 atoms or molecules by virtue of the amount of 3-dimensional space it occupies.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Molar_volume"],"direct_ancestors":[{"relation_name":"is_a","term_name":"volume","termid":"PATO:0000918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molar volume","termid":"PATO:0001680"}


id: GO:1900050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone exchange.","definition_xrefs":["PMID:20332092","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone exchange (obsolete GO:1900050)","synonyms":[{"name":"down regulation of histone chaperone","type":"related"},{"name":"down regulation of histone exchange","type":"related"},{"name":"down regulation of histone replacement","type":"exact"},{"name":"down-regulation of histone chaperone","type":"related"},{"name":"down-regulation of histone exchange","type":"related"},{"name":"down-regulation of histone replacement","type":"exact"},{"name":"downregulation of histone chaperone","type":"related"},{"name":"downregulation of histone exchange","type":"related"},{"name":"downregulation of histone replacement","type":"exact"},{"name":"inhibition of histone chaperone","type":"related"},{"name":"inhibition of histone exchange","type":"related"},{"name":"inhibition of histone replacement","type":"exact"},{"name":"negative regulation of histone chaperone","type":"related"},{"name":"negative regulation of histone replacement","type":"exact"}],"termid":"GO:1900050"}


id: PBO:0034301
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-tributary_of","termid":"PBO:0034301"}


id: PR:000027516
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcriptional regulator prz1 unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PMID:12637524","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional regulator prz1","termid":"PR:000027513"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prz1/UnMod","pombase_gene_id":"SPAC4G8.13c","synonyms":[{"name":"PomBase_original_PRO_term_name: transcriptional regulator prz1 unmodified form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-prz1/UnMod","type":"exact"},{"name":"prz1/UnMod","type":"exact"}],"termid":"PR:000027516"}


id: GO:0043938
data:
  {"annotated_genes":["SJAG_04853","SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86788],"is_not":false,"summary":null,"term":"GO:0043938"},{"annotations":[98352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[86787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"}]},"cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of sporulation, the process whose specific outcome is the progression of a spore over time, from its initiation to the mature structure.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporulation","termid":"GO:0043937"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"positively_regulates","term_name":"sporulation","termid":"GO:0043934"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02169":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sporulation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043938","terms_by_termid":{"GO:0043938":null,"GO:0075296":null,"GO:1903024":null}}


id: GO:0140858
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a ubiquitin molecule to histone 2A at the lysine-15 residue.","definition_xrefs":["PMID:28624371","PMID:22980979"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A ubiquitin ligase activity","termid":"GO:0141053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004842"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0140096","GO:0004842","GO:0019787","GO:0003674","GO:0016740","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"histone H2AK15 ubiquitin ligase activity","synonyms":[{"name":"histone ubiquitin ligase activity (H2A-K15 specific)","type":"exact"}],"termid":"GO:0140858"}


id: GO:0000307
data:
  {"annotated_genes":["SJAG_03048","SJAG_01401","SJAG_00100","SJAG_00439","SJAG_03699","SJAG_01149","SJAG_01213","SJAG_04140","SJAG_03525","SJAG_03421","SJAG_01716","SJAG_05978","SJAG_03591","SJAG_03967","SJAG_02404","SJAG_02057","SJAG_03061","SJAG_00973"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84284,87786,97672,98406,100385,101053,101733,102007,102301,102396,104404,104921,105082,107243,113139],"is_not":false,"summary":null,"term":"GO:0000307"},{"annotations":[113065,106965,91863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070692"},{"annotations":[91864,106968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019908"},{"annotations":[104924,105084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070691"}]},"cv_name":"cellular_component","definition":"Cyclin-dependent protein kinases (CDKs) are enzyme complexes that contain a kinase catalytic subunit associated with a regulatory cyclin partner.","definition_xrefs":["GOC:krc","PMID:11602261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine/threonine protein kinase complex","termid":"GO:1902554"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00439":null,"SJAG_00973":null,"SJAG_01149":null,"SJAG_01213":null,"SJAG_01401":null,"SJAG_01716":null,"SJAG_02057":null,"SJAG_02404":null,"SJAG_03048":null,"SJAG_03061":null,"SJAG_03421":null,"SJAG_03525":null,"SJAG_03591":null,"SJAG_03699":null,"SJAG_03967":null,"SJAG_04140":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cyclin-dependent protein kinase holoenzyme complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CDK holoenzyme","type":"exact"}],"termid":"GO:0000307","terms_by_termid":{"GO:0000307":null,"GO:0019908":null,"GO:0070691":null,"GO:0070692":null}}


id: PBO:0049342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF2I antisense RNA 1","termid":"PBO:0049342"}


id: GO:0043877
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galactosamine 6-phosphate + H2O = D-tagatose 6-phosphate + NH3.","definition_xrefs":["PMID:10931310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"galactosamine-6-phosphate isomerase activity","synonyms":[{"name":"AgaI","type":"related"},{"name":"galactosamine-6-phosphate deaminase activity","type":"exact"}],"termid":"GO:0043877"}


id: PBO:0058779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7113","termid":"PBO:0058779"}


id: PBO:0039938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AT-rich interaction domain 1B","termid":"PBO:0039938"}


id: PBO:0090270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone demethylase (H3-K36 specific), Jmjc domain Epe1","termid":"PBO:0090270"}


id: GO:2000342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chemokine (C-X-C motif) ligand 2 production.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemokine production","termid":"GO:0032682"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-X-C motif) ligand 2 production","termid":"GO:2000341"},{"relation_name":"negatively_regulates","term_name":"chemokine (C-X-C motif) ligand 2 production","termid":"GO:0072567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of chemokine (C-X-C motif) ligand 2 production","secondary_identifiers":["GO:1904208"],"synonyms":[{"name":"inhibition of CCL2 secretion","type":"narrow"},{"name":"inhibition of chemokine (C-C motif) ligand 2 secretion","type":"narrow"},{"name":"negative regulation of CXCL2 production","type":"exact"},{"name":"negative regulation of MIP-2 production","type":"exact"},{"name":"negative regulation of MIP2 production","type":"exact"},{"name":"negative regulation of SCYB2 production","type":"exact"},{"name":"negative regulation of chemokine (C-C motif) ligand 2 secretion","type":"narrow"}],"termid":"GO:2000342"}


id: PBO:0054681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2089","termid":"PBO:0054681"}


id: PATO:0001672
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A distribution which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased position","termid":"PATO:0001476"},{"relation_name":"is_a","term_name":"distributed","termid":"PATO:0001566"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased distribution","synonyms":[{"name":"low distribution","type":"exact"}],"termid":"PATO:0001672"}


id: PBO:0049817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 9","termid":"PBO:0049817"}


id: PBO:0088692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin alpha family nuclear import signal receptor adaptor Imp1","termid":"PBO:0088692"}


id: PBO:0050178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxy-3-methylglutaryl-CoA lyase","termid":"PBO:0050178"}


id: FYPO:0001818
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of phosphoribosylformylglycinamidine cyclo-ligase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"abnormal phosphoribosylformylglycinamidine cyclo-ligase activity","synonyms":[{"name":"abnormal AIR synthase activity","type":"exact"},{"name":"abnormal AIR synthetase activity","type":"exact"}],"termid":"FYPO:0001818"}


id: PBO:0088571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNA polymerase, zeta subunit Rev7","termid":"PBO:0088571"}


id: GO:1900092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of raffinose biosynthetic process.","definition_xrefs":["PMID:22307851","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of raffinose biosynthetic process","termid":"GO:1900091"},{"relation_name":"negatively_regulates","term_name":"raffinose biosynthetic process","termid":"GO:0033529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of raffinose biosynthetic process","synonyms":[{"name":"down regulation of raffinose anabolism","type":"exact"},{"name":"down regulation of raffinose biosynthesis","type":"exact"},{"name":"down regulation of raffinose biosynthetic process","type":"exact"},{"name":"down regulation of raffinose formation","type":"exact"},{"name":"down regulation of raffinose synthesis","type":"exact"},{"name":"down-regulation of raffinose anabolism","type":"exact"},{"name":"down-regulation of raffinose biosynthesis","type":"exact"},{"name":"down-regulation of raffinose biosynthetic process","type":"exact"},{"name":"down-regulation of raffinose formation","type":"exact"},{"name":"down-regulation of raffinose synthesis","type":"exact"},{"name":"downregulation of raffinose anabolism","type":"exact"},{"name":"downregulation of raffinose biosynthesis","type":"exact"},{"name":"downregulation of raffinose biosynthetic process","type":"exact"},{"name":"downregulation of raffinose formation","type":"exact"},{"name":"downregulation of raffinose synthesis","type":"exact"},{"name":"inhibition of raffinose anabolism","type":"exact"},{"name":"inhibition of raffinose biosynthesis","type":"exact"},{"name":"inhibition of raffinose biosynthetic process","type":"narrow"},{"name":"inhibition of raffinose formation","type":"exact"},{"name":"inhibition of raffinose synthesis","type":"exact"},{"name":"negative regulation of raffinose anabolism","type":"exact"},{"name":"negative regulation of raffinose biosynthesis","type":"exact"},{"name":"negative regulation of raffinose formation","type":"exact"},{"name":"negative regulation of raffinose synthesis","type":"exact"}],"termid":"GO:1900092"}


id: PBO:0048872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A4 pseudogene 3","termid":"PBO:0048872"}


id: PBO:0028687
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_DNA_double-strand_break_formation","termid":"PBO:0028687"}


id: GO:0002196
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of misacylated Ser-tRNA(Ala).","definition_xrefs":["PMID:21285375","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA editing activity","termid":"GO:0002161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0140098","GO:0140101","GO:0016788"],"is_obsolete":false,"name":"Ser-tRNA(Ala) hydrolase activity","termid":"GO:0002196"}


id: PBO:0079409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 8 class VIII pseudogene 3","termid":"PBO:0079409"}


id: PBO:0068450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 24, pseudogene","termid":"PBO:0068450"}


id: PBO:0044590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developing brain homeobox 1","termid":"PBO:0044590"}


id: PR:P39964
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell division cycle 5-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01129","PANTHER:PTHR10641:SF17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division cycle 5-like protein","termid":"PR:000005216"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cdc5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.12","secondary_identifiers":["UniProtKB:P39964"],"synonyms":[{"name":"Spom972h-CDC5L","type":"exact"},{"name":"cell division control protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P39964"}


id: PBO:0047122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM167A antisense RNA 1","termid":"PBO:0047122"}


id: PBO:0061410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal pentraxin 1","termid":"PBO:0061410"}


id: GO:1990360
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of phosphorylating a large number of protein targets. Contributes to cell proliferation under glycose starvation conditions. In human, the complex is present as a dimer.","definition_xrefs":["PMID:24606918","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase complex","termid":"GO:1902911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"PKM2 protein kinase complex","synonyms":[{"name":"PKM2-SAICAR complex","type":"related"},{"name":"PKM2-SAICAR protein kinase complex","type":"related"}],"termid":"GO:1990360"}


id: PBO:0018200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ammonium transmembrane transporter Amt1","termid":"PBO:0018200"}


id: GO:1905032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of membrane repolarization during cardiac muscle cell action potential.","definition_xrefs":["GOC:BHF","PMID:23157812","GO_REF:0000058","GOC:mtg_cardiac_conduct_nov11","GOC:BHF_miRNA","GOC:rph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of membrane repolarization during cardiac muscle cell action potential","termid":"GO:1905031"},{"relation_name":"negatively_regulates","term_name":"membrane repolarization during cardiac muscle cell action potential","termid":"GO:0086013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of membrane repolarization during cardiac muscle cell action potential","synonyms":[{"name":"down regulation of membrane repolarization during cardiac muscle cell action potential","type":"exact"},{"name":"down-regulation of membrane repolarization during cardiac muscle cell action potential","type":"exact"},{"name":"downregulation of membrane repolarization during cardiac muscle cell action potential","type":"exact"},{"name":"inhibition of membrane repolarization during cardiac muscle cell action potential","type":"narrow"}],"termid":"GO:1905032"}


id: PBO:0113019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Benzil oxidoreductase with preference for NADPH; localizes to the cytoplasm; sequence similarity with short-chain dehydrogenase/reductases; putative paralog of IRC24","termid":"PBO:0113019"}


id: PBO:0039928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 33","termid":"PBO:0039928"}


id: PBO:0029712
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_5-fluorouracil","termid":"PBO:0029712"}


id: PBO:0090812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PI31 proteasome regulator, C-terminal","termid":"PBO:0090812"}


id: PBO:0028509
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_at_centromere_outer_repeat","termid":"PBO:0028509"}


id: PBO:0003669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human c15orf24 ortholog","termid":"PBO:0003669"}


id: PBO:0041165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTG anti-proliferation factor 2","termid":"PBO:0041165"}


id: PBO:0046074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF3M pseudogene 1","termid":"PBO:0046074"}


id: FYPO:0003633
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which U1 snRNP binding by a gene product does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"},{"relation_name":"is_a","term_name":"abnormal ribonucleoprotein complex binding","termid":"FYPO:0003632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000702","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abolished U1 snRNP binding","synonyms":[{"name":"U1 snRNP binding abolished","type":"exact"}],"termid":"FYPO:0003633"}


id: GO:0060675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the ureteric bud is generated and organized.","definition_xrefs":["GOC:dph","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric tubule morphogenesis","termid":"GO:0072171"},{"relation_name":"part_of","term_name":"ureteric bud development","termid":"GO:0001657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureteric bud morphogenesis","termid":"GO:0060675"}


id: PBO:0067189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 251, pseudogene","termid":"PBO:0067189"}


id: GO:0018562
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3,4-dihydroxyfluorene + O2 = 2-hydroxy-4-(1-oxo-1,3-dihydro-2H-inden-2-ylidene) but-2-enoic acid.","definition_xrefs":["UM-BBD_reactionID:r0415"],"gene_count":0,"genotype_count":0,"name":"obsolete 3,4-dihydroxyfluorene 4,4-alpha-dioxygenase activity (obsolete GO:0018562)","termid":"GO:0018562"}


id: SO:0001519
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An inversion event that does not include the centromere.","direct_ancestors":[{"relation_name":"is_a","term_name":"inversion_attribute","termid":"SO:0001517"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paracentric","termid":"SO:0001519"}


id: PATO:0000548
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000548 blue light sensitivity value (obsolete PATO:0000548)","termid":"PATO:0000548"}


id: PBO:0046673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ess-2 splicing factor homolog","termid":"PBO:0046673"}


id: GO:0048890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the lateral line ganglion over time, from its formation to the mature structure. The lateral line ganglion develops from cranial ectodermal placodes situated between the eye and ear and behind the ear.","definition_xrefs":["ISBN:0387968377","ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial ganglion development","termid":"GO:0061550"},{"relation_name":"part_of","term_name":"peripheral nervous system development","termid":"GO:0007422"},{"relation_name":"part_of","term_name":"lateral line system development","termid":"GO:0048925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral line ganglion development","synonyms":[{"name":"gLL ganglion development","type":"exact"}],"termid":"GO:0048890"}


id: PBO:0051227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-20-1 (pseudogene)","termid":"PBO:0051227"}


id: MOD:00355
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(riboflavin phosphoryl)-L-serine.","definition_xrefs":["RESID:AA0350","Unimod:442#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"},{"relation_name":"is_a","term_name":"riboflavin-phosphoryl","termid":"MOD:01164"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(riboflavin phosphoryl)-L-serine","synonyms":[{"name":"(R)-2-amino-3-(riboflavin 5'-hydrogen phosphonoxy)propanoic acid","type":"exact"},{"name":"FMN","type":"related"},{"name":"MOD_RES FMN phosphoryl serine","type":"exact"},{"name":"O-(riboflavin phosphoryl)-L-serine","type":"exact"},{"name":"O3-(riboflavin phosphoryl)","type":"related"},{"name":"O3-seryl FMN","type":"exact"},{"name":"O3-seryl flavin mononucleotide","type":"exact"},{"name":"OFMNSer","type":"exact"}],"termid":"MOD:00355"}


id: PBO:0064852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 14B pseudogene 3","termid":"PBO:0064852"}


id: PBO:0055537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2973","termid":"PBO:0055537"}


id: PBO:0047267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 246 member B","termid":"PBO:0047267"}


id: GO:0001505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates levels of neurotransmitter.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of neurotransmitter levels (obsolete GO:0001505)","termid":"GO:0001505"}


id: GO:0042922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to one or more specific sites on a neuromedin U receptor.","definition_xrefs":["GOC:jl","PMID:10899166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"neuromedin U receptor binding","termid":"GO:0042922"}


id: PBO:0030182
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_vegetative_cell_population","termid":"PBO:0030182"}


id: GO:0039576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupt a JAK-STAT signal cascade in the host organism by reducing the activity of host JAK1 (Janus Kinase 1).","definition_xrefs":["PMID:16188985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host JAK-STAT cascade","termid":"GO:0039514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host JAK-STAT cascade via inhibition of JAK1 activity","secondary_identifiers":["GO:0039515","VZ:784"],"synonyms":[{"name":"disruption by virus of host JAK-STAT cascade via inhibition of JAK1 activity","type":"narrow"},{"name":"inhibition of host JAK activity by virus","type":"narrow"},{"name":"negative regulation by virus of host JAK","type":"narrow"},{"name":"negative regulation by virus of tyrosine phosphorylation of host STAT protein","type":"narrow"},{"name":"suppression by virus of host JAK-STAT cascade via inhibition of JAK1 activity","type":"narrow"},{"name":"suppression by virus of host JAK1 activity","type":"narrow"},{"name":"suppression by virus of tyrosine phosphorylation of host STAT protein","type":"narrow"},{"name":"viral inhibition of tyrosine phosphorylation of host STAT protein","type":"narrow"}],"termid":"GO:0039576"}


id: PBO:0068891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 132, pseudogene","termid":"PBO:0068891"}


id: GO:1904576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tunicamycin stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:23106379"],"gene_count":0,"genotype_count":0,"name":"obsolete response to tunicamycin (obsolete GO:1904576)","termid":"GO:1904576"}


id: PBO:0005350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-factor pheromone Map2","termid":"PBO:0005350"}


id: PBO:0069750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1032, pseudogene","termid":"PBO:0069750"}


id: PBO:0052961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kynureninase pseudogene 1","termid":"PBO:0052961"}


id: GO:0044665
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that can methylate lysine-4 of histone H3, and which contains either of the protein subunits MLL1 or MLL2 in human, or equivalent in other species.","definition_xrefs":["PMID:21875999","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone methyltransferase complex","termid":"GO:0035097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634","GO:0005654"],"is_obsolete":false,"name":"MLL1/2 complex","synonyms":[{"name":"Trx-containing complex","type":"exact"}],"termid":"GO:0044665"}


id: PBO:0051628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ilvB acetolactate synthase like","termid":"PBO:0051628"}


id: PBO:0084968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD-dependent arabinose dehydrogenase; involved in biosynthesis of dehydro-D-arabinono-1,4-lactone; similar to plant L-galactose dehydrogenase","termid":"PBO:0084968"}


id: FYPO:0009023
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing L-methionine as the nitrogen source.","definition_xrefs":["PomBase:mlr","PMID:34984977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0001985","FYPO:0000139","FYPO:0002058","FYPO:0002057","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"decreased cell population growth on methionine nitrogen source","synonyms":[{"name":"decreased growth on methionine nitrogen source","type":"broad"},{"name":"decreased vegetative cell growth on methionine nitrogen source","type":"exact"},{"name":"growth defect, slow growth with methionine nitrogen source","type":"related"},{"name":"reduced cell growth on methionine nitrogen source","type":"related"},{"name":"slow cell growth on methionine nitrogen source","type":"narrow"}],"termid":"FYPO:0009023"}


id: PBO:0005663
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Thi5","termid":"PBO:0005663"}


id: PBO:0057844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3157","termid":"PBO:0057844"}


id: SO:0001216
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intron that spliced via endonucleolytic cleavage and ligation rather than transesterification.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intron","termid":"SO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endonuclease_spliced_intron","synonyms":[{"name":"endonuclease spliced intron","type":"exact"}],"termid":"SO:0001216"}


id: GO:0048396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of intermediate mesoderm cell fate determination.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mesodermal cell fate determination","termid":"GO:0048335"},{"relation_name":"is_a","term_name":"regulation of intermediate mesodermal cell fate determination","termid":"GO:0048395"},{"relation_name":"negatively_regulates","term_name":"intermediate mesodermal cell fate determination","termid":"GO:0048394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of intermediate mesodermal cell fate determination","synonyms":[{"name":"down regulation of intermediate mesodermal cell fate determination","type":"exact"},{"name":"down-regulation of intermediate mesodermal cell fate determination","type":"exact"},{"name":"downregulation of intermediate mesodermal cell fate determination","type":"exact"},{"name":"inhibition of intermediate mesodermal cell fate determination","type":"narrow"}],"termid":"GO:0048396"}


id: GO:0106242
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-geranylgeranyl diphosphate = (+)-kolavenyl diphosphate.","definition_xrefs":["RHEA:54676","PMID:29315936","GOC:eab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"kolavenyl diphosphate synthase activity","secondary_identifiers":["EC:5.5.1.29"],"termid":"GO:0106242"}


id: GO:1990637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prolactin stimulus. The anterior pituitary hormone prolactin has a number of roles including being essential for lactation.","definition_xrefs":["PMID:7760850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to peptide hormone","termid":"GO:0043434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to prolactin","termid":"GO:1990637"}


id: GO:0036396
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A RNA methyltransferase complex that catalyzes the post-transcriptional methylation of adenosine to form N6-methyladenosine (m6A). In budding yeast, the MIS complex consists of Mum2p, Ime4p and Slz1p. In vertebrates, the complex consists of METTL3, METTL14 and associated components WTAP, ZC3H13, VIRMA, CBLL1/HAKAI and in some cases of RBM15 (RBM15 or RBM15B).","definition_xrefs":["GOC:sp","PMID:24407421","PMID:29507755","PMID:29535189","PMID:24316715","GOC:dgf","PMID:29547716","PMID:22685417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase complex","termid":"GO:0034708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RNA N6-methyladenosine methyltransferase complex","synonyms":[{"name":"METTL3-METTL14-WTAP methyltransferase complex","type":"related"},{"name":"MIS complex","type":"related"},{"name":"Mum2, Ime4, and Slz1 complex","type":"exact"},{"name":"WMM complex","type":"exact"},{"name":"m(6)A writer complex","type":"related"},{"name":"m6A methyltransferase complex","type":"related"}],"termid":"GO:0036396"}


id: PBO:0011474
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolysis rate of dextrin to glucose is 7.6 (mM min-1 ml-2)","termid":"PBO:0011474"}


id: PR:O94326
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pir2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein C725.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.08","synonyms":[{"name":"Spom972h-pir2","type":"exact"}],"termid":"PR:O94326"}


id: GO:0042409
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + caffeoyl-CoA = S-adenosyl-L-homocysteine + feruloyl-CoA.","definition_xrefs":["EC:2.1.1.104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"caffeoyl-CoA O-methyltransferase activity","secondary_identifiers":["MetaCyc:CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN","RHEA:16925"],"synonyms":[{"name":"S-adenosyl-L-methionine:caffeoyl-CoA 3-O-methyltransferase activity","type":"related"},{"name":"caffeoyl coenzyme A methyltransferase activity","type":"exact"},{"name":"caffeoyl-CoA 3-O-methyltransferase activity","type":"exact"},{"name":"trans-caffeoyl-CoA 3-O-methyltransferase activity","type":"related"}],"termid":"GO:0042409"}


id: PBO:0046356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 14","termid":"PBO:0046356"}


id: PBO:0028156
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_doxorubicin_level","termid":"PBO:0028156"}


id: GO:0010129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cyclohexane-1-carboxylate, a alicyclic acid, in the absence of oxygen.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"anaerobic cyclohexane-1-carboxylate catabolic process","secondary_identifiers":["MetaCyc:PWY-301"],"synonyms":[{"name":"anaerobic cyclohexane-1-carboxylate breakdown","type":"exact"},{"name":"anaerobic cyclohexane-1-carboxylate catabolism","type":"exact"},{"name":"anaerobic cyclohexane-1-carboxylate degradation","type":"exact"}],"termid":"GO:0010129"}


id: PBO:0060005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 25","termid":"PBO:0060005"}


id: GO:0140621
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A short filamentous structure on the surface of a bacterial cell distinguished from other pili by their D-mannose-sensitive agglutinatination of erythrocytes. In E. coli, type I pili consist of a short tip fibrillum made up of the adhesin protein (FimH) and two minor subunits (FimG and FimF) that is joined to the pilus rod, a homopolymer of ~1000 FimA subunits.","definition_xrefs":["PMID:29345620","PMID:28496159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pilus","termid":"GO:0009289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"type I pilus","synonyms":[{"name":"type 1 pilus","type":"exact"},{"name":"type I fimbriae","type":"exact"},{"name":"type I pili","type":"exact"}],"termid":"GO:0140621"}


id: PR:Q9UUI4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glioma tumor suppressor candidate region gene 2 protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01992","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C22F8.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F8.09","secondary_identifiers":["UniProtKB:Q9UUI4"],"synonyms":[{"name":"Spom972h-GLTSCR2","type":"exact"}],"termid":"PR:Q9UUI4"}


id: GO:0080152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reductive pentose-phosphate cycle.","definition_xrefs":["PMID:17031544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photosynthesis, dark reaction","termid":"GO:0010110"},{"relation_name":"regulates","term_name":"reductive pentose-phosphate cycle","termid":"GO:0019253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of reductive pentose-phosphate cycle","synonyms":[{"name":"regulation of C3 photosynthesis","type":"narrow"},{"name":"regulation of Calvin cycle","type":"narrow"}],"termid":"GO:0080152"}


id: SO:00000040002382
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 5' UTR variant where the stop codon of an upstream open reading frame is lost.","definition_xrefs":["PMID:32926138","PMID:32461616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5_prime_UTR_uORF_stop_codon_variant","termid":"SO:00000010002382"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_prime_UTR_uORF_stop_codon_loss_variant","synonyms":[{"name":"uSTOP_lost","type":"exact"}],"termid":"SO:00000040002382"}


id: PBO:0040861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BLVRB pseudogene 1","termid":"PBO:0040861"}


id: SO:0001803
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript processing variant whereby polyadenylation of the encoded transcript is decreased with respect to the reference.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyadenylation_variant","termid":"SO:0001545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased_polyadenylation_variant","synonyms":[{"name":"decreased polyadenylation variant","type":"exact"}],"termid":"SO:0001803"}


id: PBO:0086852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative Rheb-related GTPase; involved in regulating canavanine resistance and arginine uptake; member of the Ras superfamily of G-proteins","termid":"PBO:0086852"}


id: PBO:0066828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 127","termid":"PBO:0066828"}


id: GO:1900003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of serine-type endopeptidase activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endopeptidase activity","termid":"GO:0052548"},{"relation_name":"is_a","term_name":"regulation of serine-type peptidase activity","termid":"GO:1902571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of serine-type endopeptidase activity","synonyms":[{"name":"regulation of blood coagulation factor activity","type":"related"}],"termid":"GO:1900003"}


id: PBO:0077691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNIP2 pseudogene 1","termid":"PBO:0077691"}


id: PATO:0001585
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's disposition to transmit of an entity through a medium.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conductivity","termid":"PATO:0001585"}


id: GO:0047258
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sphingosine + UDP-D-galactose = H+ + psychosine + UDP.","definition_xrefs":["EC:2.4.1.23","RHEA:19485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"sphingosine beta-galactosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01928","MetaCyc:2.4.1.23-RXN"],"synonyms":[{"name":"UDP-galactose:sphingosine 1-beta-galactotransferase activity","type":"related"},{"name":"UDPgalactose:sphingosine 1-beta-galactotransferase activity","type":"related"},{"name":"UDPgalactose:sphingosine O-galactosyl transferase activity","type":"related"},{"name":"galactosyl-sphingosine transferase activity","type":"related"},{"name":"psychosine-UDP galactosyltransferase activity","type":"related"},{"name":"psychosine-uridine diphosphate galactosyltransferase activity","type":"related"},{"name":"uridine diphosphogalactose-sphingosine beta-galactosyltransferase activity","type":"related"}],"termid":"GO:0047258"}


id: GO:0080117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Lateral growth of a plant axis (shoot axis or root) that is an increase in thickness resulting from formation of secondary vascular tissues by the vascular cambium.","definition_xrefs":["PO:0025004","PMID:19074290","ISBN:0471245208","PO:0005598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral growth","termid":"GO:0080190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"secondary growth","synonyms":[{"name":"cambial secondary growth","type":"exact"}],"termid":"GO:0080117"}


id: PBO:0017807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Niemann-Pick disease type C2 protein hE1 homolog Npc2 (predicted)","termid":"PBO:0017807"}


id: FYPO:0003855
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to MTT (3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide). Cells stop growing (and may die) at a concentration of MTT that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0002683","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to MTT","synonyms":[{"name":"hypersensitive to MTT","type":"exact"},{"name":"sensitive to 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide","type":"exact"},{"name":"sensitive to MTT during mitotic cell cycle","type":"related"},{"name":"sensitive to MTT during vegetative growth","type":"exact"}],"termid":"FYPO:0003855"}


id: GO:1901201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of extracellular matrix assembly.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of extracellular matrix organization","termid":"GO:1903053"},{"relation_name":"regulates","term_name":"extracellular matrix assembly","termid":"GO:0085029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of extracellular matrix assembly","termid":"GO:1901201"}


id: GO:0003046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The intrinsic circulatory process resulting from stress relaxation that modulates the force with which blood travels through the systemic arterial circulatory system. Stress relaxation is the adaptation of vessels to a new size as a result of changes in pressure in storage areas such as veins, the liver, the spleen, and the lungs.","definition_xrefs":["GOC:mtg_cardio","ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by physical factors","termid":"GO:0003045"},{"relation_name":"is_a","term_name":"negative regulation of systemic arterial blood pressure","termid":"GO:0003085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by stress relaxation","synonyms":[{"name":"blood pressure regulation by stress relaxation","type":"exact"}],"termid":"GO:0003046"}


id: PBO:0040687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCAS3 antisense RNA 1","termid":"PBO:0040687"}


id: PR:O94305
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mgl1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monoglyceride lipase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC5E4.05c","synonyms":[{"name":"MAG hydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MAG lipase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MAGL (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MGH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MGL (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mgl1","type":"exact"},{"name":"monoacylglycerol hydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"monoacylglycerol lipase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94305"}


id: PBO:0040358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit g pseudogene 7","termid":"PBO:0040358"}


id: GO:0098646
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of collagen triple helices associated to form a sheet-like network.","definition_xrefs":["PMID:21421911","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen network","termid":"GO:0098645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"collagen sheet","synonyms":[{"name":"collagen hexagonal network","type":"exact"}],"termid":"GO:0098646"}


id: FYPO:0006464
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which telomere length is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere morphology during vegetative growth","termid":"FYPO:0002254"},{"relation_name":"is_a","term_name":"abnormal telomere length","termid":"FYPO:0006509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000293","FYPO:0000641","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal telomere length during vegetative growth","synonyms":[{"name":"abnormal telomere length during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006464"}


id: GO:1990215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts vesicle-mediated transport in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:31492901","PMID:24248335","PMID:30893609","PMID:22319451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host intracellular transport","termid":"GO:0052038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host vesicle-mediated transport","synonyms":[{"name":"negative regulation by symbiont of host intracellular transport","type":"broad"},{"name":"symbiont-mediated perturbation of host endosomal trafficking","type":"related"}],"termid":"GO:1990215"}


id: PBO:0005217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MS ion channel protein 1 (predicted)","termid":"PBO:0005217"}


id: GO:0140368
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A receptor complex that recognizes, binds and sequesters a specific receptor ligand to prevent it from binding to its regular receptor. May be soluble or membrane bound.","definition_xrefs":["GOC:bhm","PMID:9168977","PMID:30621730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"decoy receptor complex","synonyms":[{"name":"osteoclastogenesis inhibitory factor","type":"narrow"},{"name":"osteoprotegerin complex","type":"narrow"}],"termid":"GO:0140368"}


id: GO:0098918
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of synapse","termid":"GO:0098918"}


id: PBO:0087101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal protein 28 (rp28) of the small (40S) ribosomal subunit; required for translational accuracy; homologous to mammalian ribosomal protein S23 and bacterial S12; RPS23B has a paralog, RPS23A, that arose from the whole genome duplication; deletion of both RPS23A and RPS23B is lethal","termid":"PBO:0087101"}


id: PBO:0085320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol 4,5-bisphosphate 5-phosphatase; role in secretion; localizes to the endoplasmic reticulum via the C-terminal tail; lacks the Sac1 domain and proline-rich region found in the other 3 INP proteins","termid":"PBO:0085320"}


id: GO:1901730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of monensin A.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol biosynthetic process","termid":"GO:0046165"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"monensin A metabolic process","termid":"GO:1901728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"monensin A biosynthetic process","synonyms":[{"name":"monensin A anabolism","type":"exact"},{"name":"monensin A biosynthesis","type":"exact"},{"name":"monensin A formation","type":"exact"},{"name":"monensin A synthesis","type":"exact"},{"name":"monensin anabolism","type":"exact"},{"name":"monensin biosynthesis","type":"exact"},{"name":"monensin formation","type":"exact"},{"name":"monensin synthesis","type":"exact"}],"termid":"GO:1901730"}


id: PATO:0002075
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An avidity which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"avidity","termid":"PATO:0002073"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased avidity","termid":"PATO:0002075"}


id: MOD:00379
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to L-serine microcin E492 siderophore ester.","definition_xrefs":["Unimod:448#C-term","PubMed:15102848","RESID:AA0374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-serine microcin E492 siderophore ester","synonyms":[{"name":"L-serine microcin E492 siderophore ester","type":"exact"},{"name":"MOD_RES Serine microcin E492 siderophore ester","type":"exact"},{"name":"Microcin","type":"related"},{"name":"N-[5-(6-O-seryl-beta-glucosyl)-2,3-dihydroxybenzoyl]-O-[N-(2,3-dihydroxybenzoyl)-O-[N-(2,3-dihydroxybenzoyl)seryl]seryl]serine","type":"exact"},{"name":"microcin E492 siderophore ester from serine","type":"related"}],"termid":"MOD:00379"}


id: PBO:0003206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rheb GTPase Rhb1","termid":"PBO:0003206"}


id: GO:0061060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the peptidoglycan recognition protein signaling pathway.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of peptidoglycan recognition protein signaling pathway","termid":"GO:0061058"},{"relation_name":"is_a","term_name":"negative regulation of defense response to bacterium","termid":"GO:1900425"},{"relation_name":"negatively_regulates","term_name":"peptidoglycan recognition protein signaling pathway","termid":"GO:0061057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of peptidoglycan recognition protein signaling pathway","synonyms":[{"name":"negative regulation of peptidoglycan recognition protein signalling pathway","type":"exact"}],"termid":"GO:0061060"}


id: PBO:0061411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal pentraxin 2","termid":"PBO:0061411"}


id: PBO:0039295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG10 alpha-1,2-glucosyltransferase","termid":"PBO:0039295"}


id: _global:immediately_causally_downstream_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_downstream_of","termid":"_global:causally_downstream_of"},{"relation_name":"is_a","term_name":"immediately_preceded_by","termid":"_global:immediately_preceded_by"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immediately_causally_downstream_of","secondary_identifiers":["RO:0002405"],"termid":"_global:immediately_causally_downstream_of"}


id: PBO:0038589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA dehydrogenase family member 8","termid":"PBO:0038589"}


id: PBO:0109127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cripto, EGF-CFC family member","termid":"PBO:0109127"}


id: PBO:0057456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 575","termid":"PBO:0057456"}


id: GO:0009036
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of DNA to give specific double-stranded fragments with terminal 5'-phosphates and 3' hydroxyls. Cleavage is dependent on the presence in the DNA of a specific recognition site; cleavage occurs at or very near this recognition site.","definition_xrefs":["EC:3.1.21.4","PMID:12654995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"restriction endodeoxyribonuclease activity","termid":"GO:0015666"},{"relation_name":"is_a","term_name":"endodeoxyribonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0140097","GO:0003824"],"is_obsolete":false,"name":"type II site-specific deoxyribonuclease activity","secondary_identifiers":["MetaCyc:3.1.21.4-RXN"],"synonyms":[{"name":"type II restriction enzyme activity","type":"exact"}],"termid":"GO:0009036"}


id: FYPO:0006045
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic sister chromatid biorientation begins later than normal.","definition_xrefs":["PomBase:mah","PMID:27146110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid biorientation","termid":"FYPO:0000326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000337","FYPO:0000641","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of mitotic sister chromatid biorientation","synonyms":[{"name":"delayed mitotic sister chromatid biorientation","type":"exact"},{"name":"delayed onset of mitotic sister chromatid biorientation during vegetative growth","type":"exact"},{"name":"delayed onset of sister chromatid biorientation during mitotic cell cycle","type":"related"},{"name":"mitotic sister chromatid biorientation delayed","type":"exact"}],"termid":"FYPO:0006045"}


id: PBO:0077677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF superfamily member 8","termid":"PBO:0077677"}


id: GO:0015975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which a cell derives energy from inorganic compounds; results in the oxidation of the compounds from which energy is released.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generation of precursor metabolites and energy","termid":"GO:0006091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"energy derivation by oxidation of reduced inorganic compounds","secondary_identifiers":["Wikipedia:Lithotrophy"],"synonyms":[{"name":"chemolithotrophie","type":"exact"},{"name":"chemolithotrophy","type":"exact"},{"name":"lithotrophy","type":"exact"}],"termid":"GO:0015975"}


id: GO:0019537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of vibriobactin, the major siderophore produced by Vibrio cholerae.","definition_xrefs":["GOC:jl","PMID:11112537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vibriobactin metabolic process","termid":"GO:0019536"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"vibriobactin biosynthetic process","secondary_identifiers":["GO:0031196","GO:0031195"],"synonyms":[{"name":"vibriobactin anabolism","type":"exact"},{"name":"vibriobactin biosynthesis","type":"exact"},{"name":"vibriobactin biosynthetic process, peptide formation","type":"narrow"},{"name":"vibriobactin biosynthetic process, peptide modification","type":"narrow"},{"name":"vibriobactin formation","type":"exact"},{"name":"vibriobactin synthesis","type":"exact"}],"termid":"GO:0019537"}


id: PBO:0036551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secondary septum 1,6 branched 1,3-beta-glucan synthase catalytic subunit Bgs4","termid":"PBO:0036551"}


id: PR:G2TRU0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ost5 gene.","definition_xrefs":["UniProtKB:G2TRU0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit ost5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.19c","synonyms":[{"name":"Spom972h-ost5","type":"exact"},{"name":"oligosaccharyl transferase subunit ost5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"oligosaccharyl transferase subunit zeta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:G2TRU0"}


id: PBO:0057953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3677","termid":"PBO:0057953"}


id: GO:0004455
data:
  {"annotated_genes":["SJAG_00396"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107156],"is_not":false,"summary":null,"term":"GO:0004455"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-2,3-dihydroxy-3-methylbutanoate + NADP+ = (S)-2-hydroxy-2-methyl-3-oxobutanoate + NADPH + H+.","definition_xrefs":["EC:1.1.1.86"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00396":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ketol-acid reductoisomerase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:22068","MetaCyc:ACETOLACTREDUCTOISOM-RXN"],"synonyms":[{"name":"(R)-2,3-dihydroxy-3-methylbutanoate:NADP+ oxidoreductase (isomerizing)","type":"related"},{"name":"2-hydroxy-3-keto acid reductoisomerase activity","type":"related"},{"name":"acetohydroxy acid isomeroreductase activity","type":"related"},{"name":"acetohydroxy acid reductoisomerase activity","type":"related"},{"name":"acetolactate reductoisomerase activity","type":"related"},{"name":"alpha-keto-beta-hydroxylacyl reductoisomerase activity","type":"related"},{"name":"dihydroxyisovalerate (isomerizing) dehydrogenase activity","type":"related"},{"name":"dihydroxyisovalerate dehydrogenase (isomerizing) activity","type":"related"},{"name":"isomeroreductase activity","type":"related"},{"name":"ketol acid reductoisomerase activity","type":"related"},{"name":"reductoisomerase activity","type":"related"}],"termid":"GO:0004455","terms_by_termid":{"GO:0004455":null}}


id: PBO:0086952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of dynein, involved in intracellular transport; part of the dynein/dynactin pathway; targets dynein to microtubule tips, which is necessary for sliding of microtubules along bud cortex; serves at interface between dynein's ATPase site and its microtubule binding stalk, causing individual dynein motors to remain attached to microtubules for long periods; synthetic lethal with bni1; homolog of human LIS1, mutations in which cause the severe brain disorder lissencephaly","termid":"PBO:0086952"}


id: GO:0048881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mechanosensory lateral line system over time, from its formation to the mature structure. The mechanosensory lateral line system consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the head and body of all fishes and most amphibians. The neuromasts are innervated by several lateral line nerves, which project primarily to the hindbrain. The mechanosensory lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line system development","termid":"GO:0048925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mechanosensory lateral line system development","synonyms":[{"name":"LL system development","type":"exact"}],"termid":"GO:0048881"}


id: GO:0071993
data:
  {"annotated_genes":["SJAG_05213","SJAG_03497","SJAG_01344"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92132,93120,114264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036246"},{"annotations":[114265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071995"}]},"cv_name":"biological_process","definition":"The directed movement of a phytochelatin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Phytochelatins are a group of peptides that bind metals (Cd, Zn, Cu, Pb, Hg) in thiolate coordination complexes.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_03497":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"phytochelatin transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cadystin transport","type":"related"}],"termid":"GO:0071993","terms_by_termid":{"GO:0036246":null,"GO:0071995":null}}


id: PR:P0CT81
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl4101 gene.","definition_xrefs":["UniProtKB:P0CT81","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L41-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G6.13c","synonyms":[{"name":"Spom972h-rpl4101","type":"exact"}],"termid":"PR:P0CT81"}


id: PBO:0001687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein Rpp1-1","termid":"PBO:0001687"}


id: GO:0052322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of phytoalexin biosynthesis, the chemical reactions and pathways resulting in the formation of phytoalexins.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"regulation of phytoalexin biosynthetic process","termid":"GO:0052319"},{"relation_name":"is_a","term_name":"positive regulation of phytoalexin metabolic process","termid":"GO:0052320"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"positively_regulates","term_name":"phytoalexin biosynthetic process","termid":"GO:0052315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"positive regulation of phytoalexin biosynthetic process","synonyms":[{"name":"activation of phytoalexin biosynthesis","type":"narrow"},{"name":"positive regulation of phytoalexin biosynthesis","type":"exact"},{"name":"stimulation of phytoalexin biosynthesis","type":"narrow"},{"name":"up regulation of phytoalexin biosynthesis","type":"exact"},{"name":"up-regulation of phytoalexin biosynthesis","type":"exact"},{"name":"upregulation of phytoalexin biosynthesis","type":"exact"}],"termid":"GO:0052322"}


id: PBO:0052880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 9-2","termid":"PBO:0052880"}


id: GO:0140776
data:
  {"annotated_genes":["SJAG_03025","SJAG_04566","SJAG_04187","SJAG_01530","SJAG_03345"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140775"},{"annotations":[88590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003789"},{"annotations":[85334,100277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140545"},{"annotations":[92594,108839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008568"}]},"cv_name":"molecular_function","definition":"A molecular function that involves direct binding to one of the subunits of a protein-containing complex and promoting the dissociation of one or many subunits. This often happens by changing the conformation of the protein being bound, which decreases its affinity for the rest of the complex.","definition_xrefs":["PMID:23727094","PMID:34836783","PMID:29779865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01530":null,"SJAG_03025":null,"SJAG_03345":null,"SJAG_04187":null,"SJAG_04566":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"protein-containing complex destabilizing activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein unfoldase activity","type":"broad"}],"termid":"GO:0140776","terms_by_termid":{"GO:0003789":null,"GO:0008568":null,"GO:0140545":null,"GO:0140775":null}}


id: GO:0010736
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a serum response element (SRE), a short sequence with dyad symmetry found in the promoters of some of the cellular immediate-early genes, regulated by serum.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding","termid":"GO:0000978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0000976","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"serum response element binding","termid":"GO:0010736"}


id: PBO:0036362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E4 involved in splicing Prp19","termid":"PBO:0036362"}


id: PBO:0017582
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fission yeast Syntaxin homolog required for Vacuolar protein transport","termid":"PBO:0017582"}


id: GO:0001228
data:
  {"annotated_genes":["SJAG_04749","SJAG_01583","SJAG_04009","SJAG_00266","SJAG_00698","SJAG_03484","SJAG_03346","SJAG_00987","SJAG_01062","SJAG_01243","SJAG_00693","SJAG_02730","SJAG_03519","SJAG_00802","SJAG_04092","SJAG_02472","SJAG_02252","SJAG_04855","SJAG_00210","SJAG_05247","SJAG_03241","SJAG_00163","SJAG_01307","SJAG_05288","SJAG_03735","SJAG_04712","SJAG_01694","SJAG_03879","SJAG_04388","SJAG_01916","SJAG_02311","SJAG_03538","SJAG_03143","SJAG_03183","SJAG_04839","SJAG_02406","SJAG_04813","SJAG_05153","SJAG_04249","SJAG_02218","SJAG_04036","SJAG_02810"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83671,84033,84103,84527,84859,85105,85532,86159,87962,88804,89350,89771,90798,91757,92350,93366,94176,94486,95561,95867,96557,98343,100502,100830,101886,102155,103105,103632,104029,104859,105102,105237,105238,105744,106784,107945,107984,107985,109747,110150,110645,112146,112547,113561,114127],"is_not":false,"summary":null,"term":"GO:0001228"}]},"cv_name":"molecular_function","definition":"A DNA-binding transcription factor activity that activates or increases transcription of specific gene sets transcribed by RNA polymerase II.","definition_xrefs":["PMID:27145859","GOC:txnOH-2018","GOC:aruk","PMID:20737563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription factor activity, RNA polymerase II-specific","termid":"GO:0000981"},{"relation_name":"is_a","term_name":"DNA-binding transcription activator 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transcription activator activity, RNA polymerase II-specific","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9856539","Reactome:R-HSA-9856546","GO:0001212","GO:0001209","GO:0001213","GO:0001211","GO:0001205","GO:0001077","Reactome:R-HSA-9856548","Reactome:R-HSA-9856549","Reactome:R-HSA-9856550","Reactome:R-HSA-9856604"],"synonyms":[{"name":"RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription","type":"narrow"},{"name":"RNA polymerase II distal enhancer sequence-specific DNA-binding transcription factor activity involved in positive regulation of transcription","type":"narrow"},{"name":"RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription","type":"exact"},{"name":"RNA polymerase II transcriptional activator activity, copper ion regulated proximal promoter sequence-specific DNA binding","type":"narrow"},{"name":"RNA polymerase II transcriptional activator activity, metal ion regulated core promoter proximal region sequence-specific binding","type":"narrow"},{"name":"RNA polymerase II transcriptional activator activity, metal ion regulated proximal promoter sequence-specific DNA binding","type":"narrow"},{"name":"RNA polymerase II transcriptional activator activity, zinc ion regulated core promoter proximal region sequence-specific binding","type":"narrow"},{"name":"RNA polymerase II transcriptional activator activity, zinc ion regulated proximal promoter sequence-specific DNA binding","type":"narrow"},{"name":"copper ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in positive regulation of transcription","type":"narrow"},{"name":"distal enhancer DNA-binding transcription activator activity, RNA polymerase II-specific","type":"narrow"},{"name":"metal ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in positive regulation of transcription","type":"narrow"},{"name":"metal ion regulated sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription","type":"narrow"},{"name":"proximal promoter DNA-binding transcription activator activity, RNA polymerase II-specific","type":"narrow"},{"name":"sequence-specific distal enhancer binding RNA polymerase II transcription factor activity involved in positive regulation of transcription","type":"narrow"},{"name":"transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding","type":"narrow"},{"name":"transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific DNA binding","type":"narrow"},{"name":"transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding","type":"narrow"},{"name":"transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding","type":"exact"},{"name":"transcriptional activator activity, metal ion regulated sequence-specific DNA binding","type":"narrow"},{"name":"zinc ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in positive regulation of transcription","type":"narrow"}],"termid":"GO:0001228","terms_by_termid":{"GO:0001228":null}}


id: PBO:0056496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl-CpG binding domain protein 3 like 1","termid":"PBO:0056496"}


id: PBO:0036382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, flocculin Pfl3, DIPSY family","termid":"PBO:0036382"}


id: PBO:0074240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 51 subunit beta","termid":"PBO:0074240"}


id: PBO:0071848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 43","termid":"PBO:0071848"}


id: GO:0019680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-methylmalonyl-CoA, the L-enantiomer of 2-carboxypropanoyl-CoA.","definition_xrefs":["GOC:ai","GOC:mah","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methylmalonyl-CoA metabolic process","termid":"GO:0046491"},{"relation_name":"is_a","term_name":"acyl-CoA biosynthetic process","termid":"GO:0071616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"L-methylmalonyl-CoA biosynthetic process","secondary_identifiers":["MetaCyc:PWY0-43"],"synonyms":[{"name":"L-methylmalonyl-CoA anabolism","type":"exact"},{"name":"L-methylmalonyl-CoA biosynthesis","type":"exact"},{"name":"L-methylmalonyl-CoA formation","type":"exact"},{"name":"L-methylmalonyl-CoA synthesis","type":"exact"}],"termid":"GO:0019680"}


id: PBO:0064183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XJ, pseudogene","termid":"PBO:0064183"}


id: PBO:0090960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-remodelling mannose-ethanolamine phosphate phosphodiesterase","termid":"PBO:0090960"}


id: PBO:0057016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 105-1","termid":"PBO:0057016"}


id: PBO:0080065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 32 pseudogene 2","termid":"PBO:0080065"}


id: PBO:0090366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi GRIP domain protein Grp2","termid":"PBO:0090366"}


id: MOD:01487
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Applied Biosystems iTRAQ4plex-114 reporter+balance group.","definition_xrefs":["OMSSA:168","Unimod:532#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-114 reporter+balance reagent acylated residue","termid":"MOD:01485"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent N-acylated residue","termid":"MOD:01709"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ4plex-114 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 114","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ114","type":"related"},{"name":"iTRAQ114K","type":"exact"},{"name":"iTRAQ4plex114","type":"related"}],"termid":"MOD:01487"}


id: PBO:0063912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha","termid":"PBO:0063912"}


id: PBO:0041899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caveolae associated protein 4","termid":"PBO:0041899"}


id: GO:1901287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of iron-sulfur-molybdenum cofactor.","definition_xrefs":["GOC:yaf","UniPathway:UPA00782","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"iron-sulfur-molybdenum cofactor metabolic process","termid":"GO:1901286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"iron-sulfur-molybdenum cofactor catabolic process","synonyms":[{"name":"FeMo-co breakdown","type":"exact"},{"name":"FeMo-co catabolic process","type":"exact"},{"name":"FeMo-co catabolism","type":"exact"},{"name":"FeMo-co degradation","type":"exact"},{"name":"iron-molybdenum breakdown","type":"exact"},{"name":"iron-molybdenum catabolic process","type":"exact"},{"name":"iron-molybdenum catabolism","type":"exact"},{"name":"iron-molybdenum degradation","type":"exact"},{"name":"iron-sulfur-molybdenum cofactor breakdown","type":"exact"},{"name":"iron-sulfur-molybdenum cofactor catabolism","type":"exact"},{"name":"iron-sulfur-molybdenum cofactor degradation","type":"exact"}],"termid":"GO:1901287"}


id: PBO:0036083
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_dimethylation_at_centromere_inner_repeat_during_vegetative_growth","termid":"PBO:0036083"}


id: PBO:0038348
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-active_ingredient_in'","termid":"PBO:0038348"}


id: GO:0000178
data:
  {"annotated_genes":["SJAG_01818","SJAG_04824","SJAG_04006","SJAG_01191","SJAG_02991","SJAG_01431","SJAG_00854","SJAG_03179","SJAG_04153","SJAG_04321","SJAG_03745","SJAG_04818","SJAG_04084","SJAG_01521"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88280,89116,91969,93306,98131,100452,101298,102503,103498,111505,111945,114356],"is_not":false,"summary":null,"term":"GO:0000178"},{"annotations":[89115,93304,91967,100450,103497,98129,102501,114354,101296,111943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000177"},{"annotations":[95009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045025"},{"annotations":[111506,103499,98132,114357,100453,89117,97091,91970,101299,93307,88282,111946,102504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000176"}]},"cv_name":"cellular_component","definition":"A ribonuclease complex that has 3-prime to 5-prime exoribonuclease activity and possibly endoribonuclease activity, producing 5-prime-phosphomonoesters. Participates in a multitude of cellular RNA processing and degradation events preventing nuclear export and/or translation of aberrant RNAs. Restricted to processing linear and circular single-stranded RNAs (ssRNA) only. RNAs with complex secondary structures may have to be unwound or pre-processed by co-factors prior to entering the complex, esp if the 3-prime end is structured.","definition_xrefs":["PMID:17174896","PMID:20531386","PMID:26726035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exoribonuclease complex","termid":"GO:1905354"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01191":null,"SJAG_01431":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_02991":null,"SJAG_03179":null,"SJAG_03745":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"exosome (RNase complex)","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"exosome (ribonucleasease complex)","type":"exact"},{"name":"exosome multienzyme ribonuclease complex","type":"exact"}],"termid":"GO:0000178","terms_by_termid":{"GO:0000176":null,"GO:0000177":null,"GO:0000178":null,"GO:0045025":null}}


id: GO:0042207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of styrene, an aromatic hydrocarbon liquid used in the manufacture of polystyrene.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"styrene metabolic process","termid":"GO:0018966"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"hydrocarbon catabolic process","termid":"GO:0120253"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"styrene catabolic process","secondary_identifiers":["UM-BBD_pathwayID:sty"],"synonyms":[{"name":"styrene breakdown","type":"exact"},{"name":"styrene catabolism","type":"exact"},{"name":"styrene degradation","type":"exact"}],"termid":"GO:0042207"}


id: PBO:0005215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane proteolipid Pmp31","termid":"PBO:0005215"}


id: GO:0009873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated by the reception of ethylene (ethene, C2H4) by a receptor and ending with modulation of a cellular process, e.g. transcription.","definition_xrefs":["PMID:24012247","GOC:jy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorelay signal transduction system","termid":"GO:0000160"},{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"part_of","term_name":"cellular response to ethylene stimulus","termid":"GO:0071369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"ethylene-activated signaling pathway","synonyms":[{"name":"ethene mediated signaling pathway","type":"related"},{"name":"ethene mediated signalling pathway","type":"exact"},{"name":"ethylene mediated signaling pathway","type":"related"},{"name":"ethylene mediated signalling pathway","type":"related"},{"name":"ethylene signal transduction","type":"related"},{"name":"ethylene signaling pathway","type":"related"}],"termid":"GO:0009873"}


id: PATO:0002031
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved or tilted such that the tip points upwards.","definition_xrefs":["PATOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upturned","termid":"PATO:0002031"}


id: PBO:0080771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related 3","termid":"PBO:0080771"}


id: PBO:0091165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-classical export protein Nce101","termid":"PBO:0091165"}


id: GO:1990846
data:
  {"annotated_genes":["SJAG_02874","SJAG_01348"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91552,93149],"is_not":false,"summary":null,"term":"GO:1990846"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of ribonucleoside-diphosphate reductase.","definition_xrefs":["PMID:16317005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01348":null,"SJAG_02874":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0004857","GO:0003674","GO:0140678","GO:0098772","GO:0030234"],"is_obsolete":false,"name":"ribonucleoside-diphosphate reductase inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990846","terms_by_termid":{"GO:1990846":null}}


id: PBO:0070105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 19 pseudogene","termid":"PBO:0070105"}


id: GO:0007065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the sister chromatids of a replicated chromosome along the entire length of the chromosome that occurs during meiosis in a male.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic sister chromatid cohesion","termid":"GO:0051177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"male meiosis sister chromatid cohesion","termid":"GO:0007065"}


id: FYPO:0006714
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more free fatty acids measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular free fatty acid level","synonyms":[{"name":"increased cellular free fatty acid level during mitotic cell cycle","type":"related"},{"name":"increased cellular free fatty acid level during vegetative growth","type":"exact"},{"name":"increased free fatty acid accumulation","type":"related"}],"termid":"FYPO:0006714"}


id: PBO:0076429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 11 like 5","termid":"PBO:0076429"}


id: GO:0140018
data:
  {"annotated_genes":["SJAG_00579","SJAG_04756","SJAG_04452","SJAG_03677"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91525,105537,106207,110038],"is_not":false,"summary":null,"term":"GO:0140018"}]},"cv_name":"biological_process","definition":"Any process that modulates the ability of the cytoplasmic translational apparatus to interpret the genetic code.","definition_xrefs":["PMID:22768388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational fidelity","termid":"GO:0006450"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic translational elongation","termid":"GO:1900247"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00579":null,"SJAG_03677":null,"SJAG_04452":null,"SJAG_04756":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of cytoplasmic translational fidelity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140018","terms_by_termid":{"GO:0140018":null}}


id: GO:0072746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tetracycline stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"response to tetracycline","termid":"GO:1901326"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to tetracycline","termid":"GO:0072746"}


id: GO:0090676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a calcium ion is transported from one side of a membrane to the other by means of a low voltage-gated calcium channel.","definition_xrefs":["GOC:PARL","GOC:bf","PMID:20371816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion transmembrane transport","termid":"GO:0070588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"calcium ion transmembrane transport via low voltage-gated calcium channel","synonyms":[{"name":"generation of T-type calcium current","type":"related"}],"termid":"GO:0090676"}


id: PBO:0050171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 27","termid":"PBO:0050171"}


id: GO:0160196
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ditrans,polycis-polyprenol + NAD(P) = ditrans,polycis-polyprenal+ NAD(P)H + H+.","definition_xrefs":["PMID:38821050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"polyprenol dehydrogenase activity","termid":"GO:0160196"}


id: PBO:0063053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"presequence translocase associated motor 16","termid":"PBO:0063053"}


id: PBO:0051035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGF like family member 3","termid":"PBO:0051035"}


id: GO:0004758
data:
  {"annotated_genes":["SJAG_04178","SJAG_02305"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88834,101589],"is_not":false,"summary":null,"term":"GO:0004758"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine + H+ + palmitoyl-CoA = 3-dehydrosphinganine + CO2 + CoA.","definition_xrefs":["RHEA:14761","EC:2.3.1.50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-palmitoyltransferase activity","termid":"GO:0016454"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02305":null,"SJAG_04178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"serine C-palmitoyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-428127","KEGG_REACTION:R01281","MetaCyc:SERINE-C-PALMITOYLTRANSFERASE-RXN"],"synonyms":[{"name":"3-oxosphinganine synthetase activity","type":"related"},{"name":"SPT","type":"related"},{"name":"serine palmitoyltransferase","type":"broad"}],"termid":"GO:0004758","terms_by_termid":{"GO:0004758":null}}


id: GO:0071340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The accumulation of acetylcholine-gated cation channels in a narrow, central region of muscle fibers, in apposition to nerve terminals.","definition_xrefs":["GOC:dsf","PMID:19285469","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor clustering","termid":"GO:0043113"},{"relation_name":"part_of","term_name":"postsynaptic membrane organization","termid":"GO:0001941"},{"relation_name":"part_of","term_name":"neuromuscular junction development","termid":"GO:0007528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"skeletal muscle acetylcholine-gated channel clustering","synonyms":[{"name":"skeletal muscle AChR clustering","type":"exact"},{"name":"skeletal muscle nicotinic acetylcholine receptor clustering","type":"exact"}],"termid":"GO:0071340"}


id: PBO:0075925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 17","termid":"PBO:0075925"}


id: PR:O94596
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC622.06c gene.","definition_xrefs":["UniProtKB:O94596","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C622.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.06c","synonyms":[{"name":"Spom972h-SPCC622.06c","type":"exact"}],"termid":"PR:O94596"}


id: PBO:0043132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor","termid":"PBO:0043132"}


id: PBO:0039321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachidonate 12-lipoxygenase, 12S type","termid":"PBO:0039321"}


id: GO:0070601
data:
  {"annotated_genes":["SJAG_04259","SJAG_00600","SJAG_04126","SJAG_01805","SJAG_01082","SJAG_00229","SJAG_04699","SJAG_03926","SJAG_01601","SJAG_03681","SJAG_03989"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89854,95186,97331,100553,110560,109847,103876,97853,109291,111968],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990813"},{"annotations":[69556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051754"},{"annotations":[95188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071962"}]},"cv_name":"biological_process","definition":"The cell cycle process in which the sister chromatids of a replicated chromosome are joined along the length of the centromeric region of the chromosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sister chromatid cohesion","termid":"GO:0007062"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00600":null,"SJAG_01082":null,"SJAG_01601":null,"SJAG_01805":null,"SJAG_03681":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"centromeric sister chromatid cohesion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"sister chromatid cohesion at centromere","type":"exact"}],"termid":"GO:0070601","terms_by_termid":{"GO:0051754":null,"GO:0071962":null,"GO:1990813":null}}


id: PBO:0064037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 71","termid":"PBO:0064037"}


id: PBO:0051331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-26 (pseudogene)","termid":"PBO:0051331"}


id: PBO:0049002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase 1","termid":"PBO:0049002"}


id: PBO:0090466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Ste11","termid":"PBO:0090466"}


id: GO:0016683
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a diphenol, or related compound, acts as a hydrogen or electron donor and reduces an acceptor other than a cytochrome, NAD, NADP or oxygen.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on diphenols and related substances as donors, other acceptors (obsolete GO:0016683)","synonyms":[{"name":"oxidoreductase activity, acting on diphenols and related substances as donors, other acceptors","type":"exact"}],"termid":"GO:0016683"}


id: GO:1990588
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex required for prokaryotic cell division (FtsZ-dependent cytokinesis). Part of the divisome. Assembled independently of the other divisome components in the cytoplasm prior to transport to the cell septum. In E. coli consists of FtsB and FtsL.","definition_xrefs":["GOC:bhm","PMID:15165235","PMID:21784946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"divisome complex","termid":"GO:1990586"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"},{"relation_name":"part_of","term_name":"FtsQBL complex","termid":"GO:1990587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005829","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"FtsBL complex","synonyms":[{"name":"FtsB-FtsL complex","type":"exact"}],"termid":"GO:1990588"}


id: PBO:0062033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 2","termid":"PBO:0062033"}


id: PBO:0065756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pygopus family PHD finger 1","termid":"PBO:0065756"}


id: GO:0090524
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADH + H+ + 2 ferricytochrome b(5) = NAD+ + 2 ferrocytochrome b(5).","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytochrome-b5 reductase activity, acting on NAD(P)H","termid":"GO:0004128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"cytochrome-b5 reductase activity, acting on NADH","synonyms":[{"name":"cytochrome b5 reductase activity","type":"broad"}],"termid":"GO:0090524"}


id: PBO:0004564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine-rich repeat protein Sog2 (predicted)","termid":"PBO:0004564"}


id: PBO:0062581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily G member 5 pseudogene","termid":"PBO:0062581"}


id: PBO:0030120
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_protein_level_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0030120"}


id: GO:0050248
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Renilla luciferin + O2 = oxidized Renilla luciferin + CO2 + light.","definition_xrefs":["EC:1.13.12.5","MetaCyc:RENILLA-LUCIFERIN-2-MONOOXYGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"},{"relation_name":"is_a","term_name":"luciferin monooxygenase activity","termid":"GO:0045289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"Renilla-luciferin 2-monooxygenase activity","secondary_identifiers":["RHEA:14765"],"synonyms":[{"name":"Renilla-luciferin:oxygen 2-oxidoreductase (decarboxylating)","type":"related"},{"name":"Renilla-type luciferase activity","type":"related"},{"name":"aequorin activity","type":"narrow"},{"name":"luciferase (Renilla luciferin)","type":"related"},{"name":"luciferase activity","type":"broad"}],"termid":"GO:0050248"}


id: PBO:0073823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC7A2 intronic transcript 1","termid":"PBO:0073823"}


id: PBO:0034635
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_forward_centromeric_outer_repeat_transcript_level","termid":"PBO:0034635"}


id: GO:0099572
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A network of proteins within and adjacent to the postsynaptic membrane. Its major components include neurotransmitter receptors and the proteins that spatially and functionally organize them such as anchoring and scaffolding molecules, signaling enzymes and cytoskeletal components.","definition_xrefs":["PMID:22046028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle","termid":"GO:0043226"},{"relation_name":"part_of","term_name":"postsynapse","termid":"GO:0098794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynaptic specialization","termid":"GO:0099572"}


id: PBO:0030106
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_histidine_level","termid":"PBO:0030106"}


id: PBO:0014297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PI31 proteasome regulator (predicted)","termid":"PBO:0014297"}


id: GO:1900121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a protein or other molecule binding to a receptor.","definition_xrefs":["GOC:signaling","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein binding","termid":"GO:0032091"},{"relation_name":"is_a","term_name":"regulation of receptor binding","termid":"GO:1900120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of receptor binding","synonyms":[{"name":"down regulation of receptor binding","type":"exact"},{"name":"down regulation of receptor-associated protein activity","type":"related"},{"name":"down-regulation of receptor binding","type":"exact"},{"name":"downregulation of receptor binding","type":"exact"},{"name":"inhibition of receptor binding","type":"narrow"},{"name":"inhibition of receptor ligand","type":"narrow"}],"termid":"GO:1900121"}


id: GO:1902482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a regulatory T cell.","definition_xrefs":["GOC:nhn","GOC:TermGenie","PMID:20471291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell apoptotic process","termid":"GO:0070231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulatory T cell apoptotic process","synonyms":[{"name":"regulatory T cell apoptosis","type":"narrow"},{"name":"regulatory T lymphocyte apoptosis","type":"narrow"},{"name":"regulatory T lymphocyte apoptotic process","type":"exact"},{"name":"regulatory T-cell apoptosis","type":"narrow"},{"name":"regulatory T-cell apoptotic process","type":"exact"},{"name":"regulatory T-lymphocyte apoptosis","type":"narrow"},{"name":"regulatory T-lymphocyte apoptotic process","type":"exact"}],"termid":"GO:1902482"}


id: PBO:0036526
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Jalili syndrome","termid":"PBO:0036526"}


id: GO:0060922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an atrioventricular (AV) node cell. AV node cells are pacemaker cells that are found in the atrioventricular node.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac septum cell differentiation","termid":"GO:0003292"},{"relation_name":"is_a","term_name":"cardiac pacemaker cell differentiation","termid":"GO:0060920"},{"relation_name":"part_of","term_name":"atrioventricular node development","termid":"GO:0003162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrioventricular node cell differentiation","synonyms":[{"name":"AV node cell differentiation","type":"related"}],"termid":"GO:0060922"}


id: PBO:0057289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 509-1","termid":"PBO:0057289"}


id: GO:0006334
data:
  {"annotated_genes":["SJAG_04257","SJAG_02906","SJAG_04272","SJAG_02198"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91130,92510,103787,110606],"is_not":false,"summary":null,"term":"GO:0006334"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleosome organization","termid":"GO:0034728"},{"relation_name":"is_a","term_name":"protein-DNA complex assembly","termid":"GO:0065004"},{"relation_name":"part_of","term_name":"chromatin organization","termid":"GO:0006325"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02198":null,"SJAG_02906":null,"SJAG_04257":null,"SJAG_04272":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"nucleosome assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone chaperone","type":"related"},{"name":"nucleosome modeling","type":"exact"}],"termid":"GO:0006334","terms_by_termid":{"GO:0006334":null}}


id: PBO:0074314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD family member 4","termid":"PBO:0074314"}


id: PBO:0054405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1801","termid":"PBO:0054405"}


id: GO:0035362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins and DNA molecules to form a protein-DNA complex, in which the complex is formed through interaction of the protein(s) with a interferon-stimulated response element (ISRE) in the DNA.","definition_xrefs":["GOC:amm","PMID:11747630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex assembly","termid":"GO:0065004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"protein-DNA ISRE complex assembly","synonyms":[{"name":"protein-DNA interferon-stimulated response element complex assembly","type":"exact"}],"termid":"GO:0035362"}


id: PBO:0077838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPBGL antisense RNA 1","termid":"PBO:0077838"}


id: GO:0031801
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 4 metabotropic glutamate receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled glutamate receptor binding","termid":"GO:0035256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"type 4 metabotropic glutamate receptor binding","synonyms":[{"name":"type 4 metabotropic glutamate receptor ligand","type":"narrow"}],"termid":"GO:0031801"}


id: PBO:0042447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 effector protein 5","termid":"PBO:0042447"}


id: PBO:0034323
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-phenotype_of","termid":"PBO:0034323"}


id: GO:0042708
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of elastin.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete elastase activity (obsolete GO:0042708)","synonyms":[{"name":"elastase activity","type":"exact"}],"termid":"GO:0042708"}


id: GO:1990350
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex facilitating glucose transport into, out of or within a cell, or between cells.","definition_xrefs":["GOC:bhm","PMID:15449578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter complex","termid":"GO:1990351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"glucose transporter complex","termid":"GO:1990350"}


id: GO:0052578
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (E,E)-alpha-farnesene + diphosphate.","definition_xrefs":["MetaCyc:RXN-8574"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene synthase activity","termid":"GO:0010334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alpha-farnesene synthase activity","secondary_identifiers":["RHEA:27421"],"synonyms":[{"name":"(E,E)-alpha-farnesene synthase activity","type":"exact"}],"termid":"GO:0052578"}


id: PBO:0056335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 15","termid":"PBO:0056335"}


id: PBO:0041297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 calcium dependent domain containing 4A","termid":"PBO:0041297"}


id: GO:0042435
data:
  {"annotated_genes":["SJAG_03167","SJAG_01455","SJAG_02505","SJAG_05007"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110725,100445,99564,87623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000162"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of compounds that contain an indole (2,3-benzopyrrole) skeleton.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"indole-containing compound metabolic process","termid":"GO:0042430"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01455":null,"SJAG_02505":null,"SJAG_03167":null,"SJAG_05007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"indole-containing compound biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"indole derivative biosynthesis","type":"exact"},{"name":"indole derivative biosynthetic process","type":"exact"},{"name":"indole-containing compound anabolism","type":"exact"},{"name":"indole-containing compound biosynthesis","type":"exact"},{"name":"indole-containing compound formation","type":"exact"},{"name":"indole-containing compound synthesis","type":"exact"}],"termid":"GO:0042435","terms_by_termid":{"GO:0000162":null}}


id: PBO:0081178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger FYVE-type containing 28","termid":"PBO:0081178"}


id: GO:0014735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of muscle atrophy.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle adaptation","termid":"GO:0043502"},{"relation_name":"regulates","term_name":"muscle atrophy","termid":"GO:0014889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of muscle atrophy","termid":"GO:0014735"}


id: PR:Q9USI0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC794.15 gene.","definition_xrefs":["UniProtKB:Q9USI0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C794.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.15","synonyms":[{"name":"Spom972h-SPCC794.15","type":"exact"}],"termid":"PR:Q9USI0"}


id: PBO:0060682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDRG family member 2","termid":"PBO:0060682"}


id: PBO:0078587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60","termid":"PBO:0078587"}


id: PBO:0058871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9903","termid":"PBO:0058871"}


id: PATO:0001963
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curled quality inhering in a bearer by virtue of the bearer's edges of its surface being rolled backwards spirally on each side.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curled","termid":"PATO:0000405"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"revolute","termid":"PATO:0001963"}


id: PBO:0074829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 25","termid":"PBO:0074829"}


id: PBO:0076669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPM8 channel associated factor 2","termid":"PBO:0076669"}


id: PR:O74790
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutaredoxin-3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03925","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monothiol glutaredoxin-4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC26H8.06","secondary_identifiers":["UniProtKB:O74790"],"synonyms":[{"name":"Spom972h-GLRX3","type":"exact"}],"termid":"PR:O74790"}


id: GO:0030887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stimulates, induces or increases the rate of myeloid dendritic cell activation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte activation","termid":"GO:0002696"},{"relation_name":"is_a","term_name":"regulation of myeloid dendritic cell activation","termid":"GO:0030885"},{"relation_name":"positively_regulates","term_name":"myeloid dendritic cell activation","termid":"GO:0001773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myeloid dendritic cell activation","synonyms":[{"name":"activation of myeloid dendritic cell activation","type":"narrow"},{"name":"stimulation of myeloid dendritic cell activation","type":"narrow"},{"name":"up regulation of myeloid dendritic cell activation","type":"exact"},{"name":"up-regulation of myeloid dendritic cell activation","type":"exact"},{"name":"upregulation of myeloid dendritic cell activation","type":"exact"}],"termid":"GO:0030887"}


id: PATO:0000816
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000816 relative odor acuity value (obsolete PATO:0000816)","termid":"PATO:0000816"}


id: PBO:0041316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 69 pseudogene 2","termid":"PBO:0041316"}


id: PBO:0065107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKCA antisense RNA 1","termid":"PBO:0065107"}


id: PBO:0002182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUR7 family protein (predicted)","termid":"PBO:0002182"}


id: PBO:0085241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidyl-prolyl cis-trans isomerase (cyclophilin); catalyzes the cis-trans isomerization of peptide bonds N-terminal to proline residues; plays a role in determining prion variants; binds to Hsp82p and contributes to chaperone activity; protein abundance increases in response to DNA replication stress","termid":"PBO:0085241"}


id: PBO:0077063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine triphosphatase","termid":"PBO:0077063"}


id: GO:0140081
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a glycosylated region of a protein.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"glycosylated region protein binding","termid":"GO:0140081"}


id: PBO:0038362
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_necessary_component_activity","termid":"PBO:0038362"}


id: PBO:0017598
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mei2 Interacting Protein","termid":"PBO:0017598"}


id: FYPO:0007542
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of double-stranded DNA binding by a gene product is normal (i.e. indistinguishable from wild type). The relevant gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA binding","termid":"FYPO:0000655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000653"],"is_obsolete":false,"name":"normal double-stranded DNA binding","synonyms":[{"name":"normal dsDNA binding","type":"exact"}],"termid":"FYPO:0007542"}


id: GO:0009595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a biotic stimulus, one caused or produced by a living organism, is received and converted into a molecular signal.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to biotic stimulus","termid":"GO:0009607"},{"relation_name":"is_a","term_name":"detection of stimulus","termid":"GO:0051606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of biotic stimulus","secondary_identifiers":["GO:0009596"],"synonyms":[{"name":"perception of biotic stimulus","type":"related"}],"termid":"GO:0009595"}


id: PBO:0074851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 38D","termid":"PBO:0074851"}


id: GO:0097597
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Specialized organelle found in Giardia species (trophozoite stage) and characterized by a spiral array of microtubules and microtubule-associated structures including dorsal microribbons and crossbridges. The edge of the ventral disc narrows into a lateral crest. The ventral disk mediates mechanical attachment of the trophozoite to the host's intestinal wall, and contains the contractile proteins actinin, alpha-actinin, myosin, and tropomyosin working towards contraction of the disk involved in adherence.","definition_xrefs":["PMID:4777416","PMID:5961344","ISBN:9780124260207","GOC:giardia","PMID:11432808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ventral disc","synonyms":[{"name":"adhesive disc","type":"related"},{"name":"ventral adhesive disc","type":"exact"},{"name":"ventral disk","type":"related"}],"termid":"GO:0097597"}


id: PBO:0001783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha,alpha-trehalose-phosphate synthase (predicted)","termid":"PBO:0001783"}


id: PBO:0074148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member D1","termid":"PBO:0074148"}


id: PBO:0012554
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae Dbr1","termid":"PBO:0012554"}


