# terms

id: PBO:0079963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 1","termid":"PBO:0079963"}


id: GO:1901082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of relaxation of smooth muscle.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of relaxation of muscle","termid":"GO:1901079"},{"relation_name":"is_a","term_name":"regulation of relaxation of smooth muscle","termid":"GO:1901080"},{"relation_name":"positively_regulates","term_name":"relaxation of smooth muscle","termid":"GO:0044557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of relaxation of smooth muscle","synonyms":[{"name":"activation of relaxation of smooth muscle","type":"narrow"},{"name":"activation of smooth muscle relaxation","type":"exact"},{"name":"positive regulation of smooth muscle relaxation","type":"exact"},{"name":"up regulation of relaxation of smooth muscle","type":"exact"},{"name":"up regulation of smooth muscle relaxation","type":"exact"},{"name":"up-regulation of relaxation of smooth muscle","type":"exact"},{"name":"up-regulation of smooth muscle relaxation","type":"exact"},{"name":"upregulation of relaxation of smooth muscle","type":"exact"},{"name":"upregulation of smooth muscle relaxation","type":"exact"}],"termid":"GO:1901082"}


id: PBO:0051749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 15","termid":"PBO:0051749"}


id: GO:1901784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving p-cresol.","definition_xrefs":["PMID:10623531","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cresol metabolic process","termid":"GO:0042212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"p-cresol metabolic process","synonyms":[{"name":"p-cresol metabolism","type":"exact"}],"termid":"GO:1901784"}


id: GO:0140952
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl27-[histone H3] + 2 S-adenosyl-L-methionine = 2 H+ + N6,N6-dimethyl-L-lysyl27-[histone H3] + 2 S-adenosyl-L-homocysteine. This reaction is the successive addition of two methyl groups to the unmethylated lysine residue at position 27 of histone H3, producing histone H3K27me2.","definition_xrefs":["RHEA:64452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K27 methyltransferase activity","termid":"GO:0046976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0008276","GO:0140096","GO:0016741","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"histone H3K27 dimethyltransferase activity","secondary_identifiers":["EC:2.1.1.371"],"synonyms":[{"name":"histone H3-K27 dimethylase activity","type":"exact"},{"name":"histone H3-K27 dimethylation","type":"broad"},{"name":"histone H3K27 dimethylase activity","type":"exact"},{"name":"histone H3K27 dimethylation","type":"broad"},{"name":"histone H3K27 mono/dimethylase activity","type":"exact"},{"name":"histone lysine N-dimethyltransferase activity (H3-K27 specific)","type":"exact"}],"termid":"GO:0140952"}


id: PBO:0049684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXD antisense growth-associated long non-coding RNA","termid":"PBO:0049684"}


id: GO:0036476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any biological process that results in permanent cessation of all vital functions of a neuron upon exposure to hydrogen peroxide (H2O2).","definition_xrefs":["GOC:bf","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete neuron death in response to hydrogen peroxide (obsolete GO:0036476)","synonyms":[{"name":"hydrogen peroxide-induced neuron death","type":"exact"},{"name":"neuron death in response to H2O2","type":"exact"},{"name":"neuronal cell death in response to hydrogen peroxide","type":"exact"}],"termid":"GO:0036476"}


id: GO:2000353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endothelial cell apoptotic process.","definition_xrefs":["GOC:mah","GOC:BHF","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell apoptotic process","termid":"GO:1904037"},{"relation_name":"is_a","term_name":"regulation of endothelial cell apoptotic process","termid":"GO:2000351"},{"relation_name":"positively_regulates","term_name":"endothelial cell apoptotic process","termid":"GO:0072577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endothelial cell apoptotic process","synonyms":[{"name":"positive regulation of apoptosis of endothelial cells","type":"exact"},{"name":"positive regulation of endothelial cell apoptosis","type":"narrow"},{"name":"positive regulation of endothelial cell programmed cell death by apoptosis","type":"exact"},{"name":"positive regulation of killing of endothelial cells","type":"exact"},{"name":"positive regulation of programmed cell death of endothelial cells by apoptosis","type":"exact"},{"name":"positive regulation of programmed cell death, endothelial cells","type":"exact"}],"termid":"GO:2000353"}


id: PBO:0053916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1213","termid":"PBO:0053916"}


id: GO:0043549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphorylation","termid":"GO:0042325"},{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of kinase activity","termid":"GO:0043549"}


id: GO:0021833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The interaction of a cell and the extracellular matrix involved in the directed tangential movement of cells mediated by cell-cell interactions in the developing cerebral cortex.","definition_xrefs":["GOC:cls","GOC:jid","GOC:dgh","GOC:ascb_2009","GOC:dph","GO_REF:0000021","GOC:tb","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate adhesion","termid":"GO:0031589"},{"relation_name":"part_of","term_name":"cerebral cortex tangential migration using cell-cell interactions","termid":"GO:0021823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell-matrix adhesion involved in tangential migration using cell-cell interactions","termid":"GO:0021833"}


id: FYPO:0003418
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which malate dehydrogenase (decarboxylating) (NAD+) activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal malate dehydrogenase (decarboxylating) (NAD+) activity","termid":"FYPO:0002621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"abolished malate dehydrogenase (decarboxylating) (NAD+) activity","synonyms":[{"name":"abolished 'malic' enzyme activity","type":"related"},{"name":"abolished (S)-malate:NAD+ oxidoreductase (oxaloacetate-decarboxylating) activity","type":"exact"},{"name":"abolished NAD-linked malic enzyme activity","type":"related"},{"name":"abolished NAD-malic enzyme activity","type":"broad"},{"name":"abolished NAD-specific malic enzyme activity","type":"related"},{"name":"abolished malate dehydrogenase (oxaloacetate-decarboxylating) activity","type":"exact"},{"name":"malate dehydrogenase (decarboxylating) (NAD+) activity abolished","type":"exact"}],"termid":"FYPO:0003418"}


id: GO:0097326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a melanocyte to another cell via adhesion molecules.","definition_xrefs":["CL:0000148","GOC:uh","PMID:22637532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell-cell adhesion","termid":"GO:0090136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"melanocyte adhesion","termid":"GO:0097326"}


id: FYPO:0003011
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is increased.","definition_xrefs":["PMID:23936074","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"},{"relation_name":"is_a","term_name":"increased protein localization to chromosome during vegetative growth","termid":"FYPO:0002840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"increased protein localization to chromatin during vegetative growth","synonyms":[{"name":"increased protein localisation to chromatin","type":"exact"},{"name":"increased protein localization to chromatin during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003011"}


id: PBO:0027018
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_telomeric_repeat_sequence","termid":"PBO:0027018"}


id: GO:1900712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tensidol B biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of tensidol B biosynthetic process","termid":"GO:1900710"},{"relation_name":"positively_regulates","term_name":"tensidol B biosynthetic process","termid":"GO:1900608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of tensidol B biosynthetic process","synonyms":[{"name":"activation of tensidol B anabolism","type":"exact"},{"name":"activation of tensidol B biosynthesis","type":"exact"},{"name":"activation of tensidol B biosynthetic process","type":"narrow"},{"name":"activation of tensidol B formation","type":"exact"},{"name":"activation of tensidol B synthesis","type":"exact"},{"name":"positive regulation of tensidol B anabolism","type":"exact"},{"name":"positive regulation of tensidol B biosynthesis","type":"exact"},{"name":"positive regulation of tensidol B formation","type":"exact"},{"name":"positive regulation of tensidol B synthesis","type":"exact"},{"name":"up regulation of tensidol B anabolism","type":"exact"},{"name":"up regulation of tensidol B biosynthesis","type":"exact"},{"name":"up regulation of tensidol B biosynthetic process","type":"exact"},{"name":"up regulation of tensidol B formation","type":"exact"},{"name":"up regulation of tensidol B synthesis","type":"exact"},{"name":"up-regulation of tensidol B anabolism","type":"exact"},{"name":"up-regulation of tensidol B biosynthesis","type":"exact"},{"name":"up-regulation of tensidol B biosynthetic process","type":"exact"},{"name":"up-regulation of tensidol B formation","type":"exact"},{"name":"up-regulation of tensidol B synthesis","type":"exact"},{"name":"upregulation of tensidol B anabolism","type":"exact"},{"name":"upregulation of tensidol B biosynthesis","type":"exact"},{"name":"upregulation of tensidol B biosynthetic process","type":"exact"},{"name":"upregulation of tensidol B formation","type":"exact"},{"name":"upregulation of tensidol B synthesis","type":"exact"}],"termid":"GO:1900712"}


id: PBO:0078858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPC6 pseudogene 6","termid":"PBO:0078858"}


id: GO:0097479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a synaptic vesicle or vesicles are transported to, and/or maintained in, a specific location.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle localization","termid":"GO:0051648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"synaptic vesicle localization","synonyms":[{"name":"establishment and maintenance of synaptic vesicle localization","type":"exact"},{"name":"establishment and maintenance of synaptic vesicle position","type":"exact"},{"name":"synaptic vesicle localisation","type":"exact"}],"termid":"GO:0097479"}


id: PBO:0027682
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_membrane_organization_during_conjugation","termid":"PBO:0027682"}


id: GO:0044160
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The pigmented membrane of any host thylakoid.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"},{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"},{"relation_name":"part_of","term_name":"host thylakoid","termid":"GO:0044159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host thylakoid membrane","termid":"GO:0044160"}


id: PBO:0005398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex associated protein","termid":"PBO:0005398"}


id: PBO:0088825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hrd1 ubiquitin ligase complex, CUE domain protein Cue1","termid":"PBO:0088825"}


id: PR:Q10447
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tea5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase domain-containing protein ppk2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.14c","synonyms":[{"name":"Spom972h-tea5","type":"exact"}],"termid":"PR:Q10447"}


id: GO:0033938
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->6) linkages between alpha-L-fucose and N-acetyl-D-glucosamine in glycopeptides such as immunoglobulin G glycopeptide and fucosyl-asialo-agalacto-fetuin.","definition_xrefs":["EC:3.2.1.127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-L-fucosidase activity","termid":"GO:0004560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"1,6-alpha-L-fucosidase activity","secondary_identifiers":["MetaCyc:3.2.1.127-RXN"],"synonyms":[{"name":"1,6-L-fucosyl-N-acetyl-D-glucosaminylglycopeptide fucohydrolase activity","type":"related"}],"termid":"GO:0033938"}


id: PBO:0065099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase cAMP-dependent type I regulatory subunit beta","termid":"PBO:0065099"}


id: PBO:0074245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 66 member 1 like","termid":"PBO:0074245"}


id: GO:0007175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of EGF-activated receptor activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epidermal growth factor-activated receptor activity","termid":"GO:0007176"},{"relation_name":"is_a","term_name":"negative regulation of epidermal growth factor receptor signaling pathway","termid":"GO:0042059"},{"relation_name":"is_a","term_name":"negative regulation of protein tyrosine kinase activity","termid":"GO:0061099"},{"relation_name":"is_a","term_name":"negative regulation of signaling receptor activity","termid":"GO:2000272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of epidermal growth factor-activated receptor activity","secondary_identifiers":["GO:0007177"],"synonyms":[{"name":"EGF receptor downregulation","type":"exact"},{"name":"down regulation of epidermal growth factor receptor activity","type":"exact"},{"name":"down-regulation of epidermal growth factor receptor activity","type":"exact"},{"name":"downregulation of epidermal growth factor receptor activity","type":"exact"},{"name":"inhibition of epidermal growth factor receptor activity","type":"narrow"},{"name":"negative regulation of EGF receptor activity","type":"exact"},{"name":"negative regulation of EGFR activity","type":"exact"},{"name":"negative regulation of epidermal growth factor receptor activity","type":"exact"}],"termid":"GO:0007175"}


id: SO:0000040
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A clone of a DNA region of a genome.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"genomic_DNA","termid":"SO:0000991"},{"relation_name":"is_a","term_name":"clone","termid":"SO:0000151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genomic_clone","synonyms":[{"name":"genomic clone","type":"exact"}],"termid":"SO:0000040"}


id: GO:0043627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by an estrogen, C18 steroid hormones that can stimulate the development of female sexual characteristics.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to estrogen","synonyms":[{"name":"response to 17alpha-ethynylestradiol","type":"related"},{"name":"response to estrogen stimulus","type":"exact"},{"name":"response to oestrogen stimulus","type":"exact"}],"termid":"GO:0043627"}


id: PBO:0055560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2996","termid":"PBO:0055560"}


id: PBO:0064195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A and acyltransferase 3","termid":"PBO:0064195"}


id: PBO:0045300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 2","termid":"PBO:0045300"}


id: PBO:0065519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat domain 1","termid":"PBO:0065519"}


id: PBO:0080071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 35","termid":"PBO:0080071"}


id: PBO:0004111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CK2 family regulatory subunit (predicted)","termid":"PBO:0004111"}


id: PBO:0084556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the SWI/SNF chromatin remodeling complex; has an as yet unidentified role in the complex; has identifiable counterparts in closely related yeast species; abundantly expressed in many growth conditions; paralog of Npl6p; relocates to the cytosol under hypoxic conditions","termid":"PBO:0084556"}


id: GO:0003416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of an endochondral bone that contributes to the shaping of the bone.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone growth","termid":"GO:0098868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endochondral bone growth","termid":"GO:0003416"}


id: PATO:0001441
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular adhesivity quality inhering in a molecule in one cell by virtue of the bearer's attachment to an nonidentical molecule in an adjacent cell.","definition_xrefs":["GO:GO"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular adhesivity","termid":"PATO:0001531"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterophilic","termid":"PATO:0001441"}


id: PBO:0076484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TARBP2 pseudogene 1","termid":"PBO:0076484"}


id: PR:Q09895
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC24B11.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09895"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24B11.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24B11.08c","synonyms":[{"name":"Spom972h-SPAC24B11.08c","type":"exact"}],"termid":"PR:Q09895"}


id: PBO:0017858
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolysis rate of dextrin to glucose is 7.6 (uM min-1 ml-2)","termid":"PBO:0017858"}


id: GO:0036430
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + CMP = ADP + CDP.","definition_xrefs":["RHEA:11600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(d)CMP kinase activity","termid":"GO:0004127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"CMP kinase activity","secondary_identifiers":["KEGG_REACTION:R00512","MetaCyc:RXN-11832"],"termid":"GO:0036430"}


id: PBO:0042940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin assembly factor 1 subunit A","termid":"PBO:0042940"}


id: GO:0009300
data:
  {"annotated_genes":["SJAG_00266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104022],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0060195"}]},"cv_name":"biological_process","definition":"The synthesis of antisense RNA, an RNA molecule complementary in sequence to another RNA or DNA molecule, which, by binding the latter, acts to inhibit its function and/or completion of synthesis, on a template of DNA.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"},{"relation_name":"is_a","term_name":"antisense RNA metabolic process","termid":"GO:0042868"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"antisense RNA transcription","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0009300","terms_by_termid":{"GO:0060195":null}}


id: PBO:0053055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucyl-tRNA synthetase 1","termid":"PBO:0053055"}


id: PBO:0038869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine deaminase tRNA specific 3","termid":"PBO:0038869"}


id: PBO:0080692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WNK lysine deficient protein kinase 4","termid":"PBO:0080692"}


id: PBO:0005610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swr1 complex bromodomain subunit Brf1","termid":"PBO:0005610"}


id: GO:0035770
data:
  {"annotated_genes":["SJAG_00686","SJAG_03023","SJAG_03876","SJAG_03214","SJAG_02808","SJAG_00285","SJAG_01822","SJAG_03597","SJAG_05010","SJAG_03276","SJAG_01625","SJAG_04350","SJAG_02628","SJAG_04640","SJAG_04744","SJAG_03113","SJAG_04407","SJAG_04427","SJAG_02263","SJAG_02213","SJAG_01548","SJAG_03157","SJAG_02573","SJAG_00544","SJAG_16457","SJAG_02419","SJAG_03460","SJAG_02592","SJAG_02540","SJAG_01910","SJAG_01026","SJAG_03954","SJAG_01317","SJAG_03070","SJAG_02164","SJAG_03696","SJAG_04342","SJAG_01222","SJAG_00759","SJAG_02469","SJAG_00507","SJAG_01436","SJAG_01650","SJAG_01159","SJAG_02638","SJAG_00474","SJAG_03283","SJAG_02995","SJAG_03424","SJAG_00966","SJAG_02239","SJAG_03132","SJAG_03498","SJAG_04880","SJAG_01512","SJAG_00391","SJAG_04672","SJAG_05694","SJAG_04480","SJAG_04772","SJAG_03277","SJAG_01053","SJAG_03762","SJAG_02663","SJAG_16454","SJAG_01954","SJAG_00423","SJAG_01897","SJAG_01479"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90610,101247,92143,102988,86418,90837,107126,72117,85762,86251,73612,90419,90611,102711,101708,85218,87594,94570,86328,93844,89057,106030,109682,94982,86370,85967,98806,101623,78229,105930,83596,108059,95981,88595,101709,89056,101359,109386,93173,85546,86380,109605,113353,84426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010494"},{"annotations":[105250,107127,87978,91652,104584,108214,109538,91569,88641,101624,99093,109388,84310,108060,105983,102179,108940,88039,111210,112680,88596,91686,113237,95983,85764,97061,91881,105933,86373,111394,87597,89457,110994,111724,107310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000932"}]},"cv_name":"cellular_component","definition":"A non-membranous macromolecular complex containing proteins and translationally silenced mRNAs. RNA granules contain proteins that control the localization, stability, and translation of their RNA cargo. Different types of RNA granules (RGs) exist, depending on the cell type and cellular conditions.","definition_xrefs":["PMID:16520386","PMID:21436445","GOC:go_curators","GOC:sp","PMID:20368989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"},{"relation_name":"is_a","term_name":"supramolecular complex","termid":"GO:0099080"}],"gene_count":69,"genes_by_uniquename":{"SJAG_00285":null,"SJAG_00391":null,"SJAG_00423":null,"SJAG_00474":null,"SJAG_00507":null,"SJAG_00544":null,"SJAG_00686":null,"SJAG_00759":null,"SJAG_00966":null,"SJAG_01026":null,"SJAG_01053":null,"SJAG_01159":null,"SJAG_01222":null,"SJAG_01317":null,"SJAG_01436":null,"SJAG_01479":null,"SJAG_01512":null,"SJAG_01548":null,"SJAG_01625":null,"SJAG_01650":null,"SJAG_01822":null,"SJAG_01897":null,"SJAG_01910":null,"SJAG_01954":null,"SJAG_02164":null,"SJAG_02213":null,"SJAG_02239":null,"SJAG_02263":null,"SJAG_02419":null,"SJAG_02469":null,"SJAG_02540":null,"SJAG_02573":null,"SJAG_02592":null,"SJAG_02628":null,"SJAG_02638":null,"SJAG_02663":null,"SJAG_02808":null,"SJAG_02995":null,"SJAG_03023":null,"SJAG_03070":null,"SJAG_03113":null,"SJAG_03132":null,"SJAG_03157":null,"SJAG_03214":null,"SJAG_03276":null,"SJAG_03277":null,"SJAG_03283":null,"SJAG_03424":null,"SJAG_03460":null,"SJAG_03498":null,"SJAG_03597":null,"SJAG_03696":null,"SJAG_03762":null,"SJAG_03876":null,"SJAG_03954":null,"SJAG_04342":null,"SJAG_04350":null,"SJAG_04407":null,"SJAG_04427":null,"SJAG_04480":null,"SJAG_04640":null,"SJAG_04672":null,"SJAG_04744":null,"SJAG_04772":null,"SJAG_04880":null,"SJAG_05010":null,"SJAG_05694":null,"SJAG_16454":null,"SJAG_16457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ribonucleoprotein granule","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"RNA granule","type":"narrow"},{"name":"RNP granule","type":"exact"},{"name":"mRNP granule","type":"exact"}],"termid":"GO:0035770","terms_by_termid":{"GO:0000932":null,"GO:0010494":null}}


id: PBO:0068389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF207 antisense RNA 1","termid":"PBO:0068389"}


id: PBO:0083340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the uncharacterized ORF YDL010W","termid":"PBO:0083340"}


id: PR:O94360
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mob1 gene.","definition_xrefs":["UniProtKB:O94360","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maintenance of ploidy protein mob1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.13c","synonyms":[{"name":"Spom972h-mob1","type":"exact"}],"termid":"PR:O94360"}


id: GO:0032226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of dopaminergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter dopamine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic transmission, dopaminergic","termid":"GO:0032225"},{"relation_name":"is_a","term_name":"positive regulation of synaptic transmission","termid":"GO:0050806"},{"relation_name":"positively_regulates","term_name":"synaptic transmission, dopaminergic","termid":"GO:0001963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of synaptic transmission, dopaminergic","synonyms":[{"name":"activation of synaptic transmission, dopaminergic","type":"narrow"},{"name":"stimulation of synaptic transmission, dopaminergic","type":"narrow"},{"name":"up regulation of synaptic transmission, dopaminergic","type":"exact"},{"name":"up-regulation of synaptic transmission, dopaminergic","type":"exact"},{"name":"upregulation of synaptic transmission, dopaminergic","type":"exact"}],"termid":"GO:0032226"}


id: PR:O14291
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9E9.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C9E9.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.05","synonyms":[{"name":"Spom972h-SPAC9E9.05","type":"exact"}],"termid":"PR:O14291"}


id: PBO:0060698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A3 pseudogene 6","termid":"PBO:0060698"}


id: PBO:0051172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-60 (pseudogene)","termid":"PBO:0051172"}


id: PBO:0046446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin BC and polycomb repressive complex 2 associated protein","termid":"PBO:0046446"}


id: PBO:0046342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7","termid":"PBO:0046342"}


id: PBO:0113393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; physical interaction with Atg27p suggests a possible role in autophagy; targeted to vacuole via AP-3 pathway","termid":"PBO:0113393"}


id: PBO:0005040
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked myopathy with excessive autophagy","termid":"PBO:0005040"}


id: PBO:0040639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BASP1 pseudogene 1","termid":"PBO:0040639"}


id: PBO:0034493
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-split_kinetochore_during_meiosis_I","termid":"PBO:0034493"}


id: FYPO:0006503
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the actin fusion focus is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein transport","termid":"FYPO:0005744"},{"relation_name":"is_a","term_name":"abnormal protein localization during mating","termid":"FYPO:0005989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to actin fusion focus","synonyms":[{"name":"abnormal protein localisation to actin fusion focus","type":"exact"}],"termid":"FYPO:0006503"}


id: PBO:0077455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM183A pseudogene 5","termid":"PBO:0077455"}


id: GO:0062064
data:
  {"annotated_genes":["SJAG_01567"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93549],"is_not":false,"summary":null,"term":"GO:0062064"}]},"cv_name":"molecular_function","definition":"Binding to a box C/D methylation guide snoRNP complex.","definition_xrefs":["PMID:10679015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNP binding","termid":"GO:0030519"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"box C/D methylation guide snoRNP complex binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0062064","terms_by_termid":{"GO:0062064":null}}


id: GO:0048298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of isotype switching to IgA isotypes.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of isotype switching","termid":"GO:0045830"},{"relation_name":"is_a","term_name":"regulation of isotype switching to IgA isotypes","termid":"GO:0048296"},{"relation_name":"positively_regulates","term_name":"isotype switching to IgA isotypes","termid":"GO:0048290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"positively_regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006259","GO:0006310"],"is_obsolete":false,"name":"positive regulation of isotype switching to IgA isotypes","synonyms":[{"name":"activation of isotype switching to IgA isotypes","type":"narrow"},{"name":"positive regulation of class switch recombination to IgA isotypes","type":"exact"},{"name":"positive regulation of class switching to IgA isotypes","type":"exact"},{"name":"positive regulation of isotype switch recombination to IgA isotypes","type":"exact"},{"name":"stimulation of isotype switching to IgA isotypes","type":"narrow"},{"name":"up regulation of isotype switching to IgA isotypes","type":"exact"},{"name":"up-regulation of isotype switching to IgA isotypes","type":"exact"},{"name":"upregulation of isotype switching to IgA isotypes","type":"exact"}],"termid":"GO:0048298"}


id: MOD:01423
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a palmitoleyl group.","definition_xrefs":["Unimod:431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"palmitoleylated residue","termid":"MOD:01423"}


id: GO:0060696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of phospholipid catabolism, the chemical reactions and pathways resulting in the breakdown of phospholipids, any lipid containing phosphoric acid as a mono- or diester.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular catabolic process","termid":"GO:0031329"},{"relation_name":"is_a","term_name":"regulation of lipid catabolic process","termid":"GO:0050994"},{"relation_name":"is_a","term_name":"regulation of phospholipid metabolic process","termid":"GO:1903725"},{"relation_name":"regulates","term_name":"phospholipid catabolic process","termid":"GO:0009395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006629"],"is_obsolete":false,"name":"regulation of phospholipid catabolic process","termid":"GO:0060696"}


id: PBO:0065819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB5A, member RAS oncogene family","termid":"PBO:0065819"}


id: FYPO:0003046
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin is assembled over a larger region near the centromere than normal, such that it extends beyond the IRC3L boundary element.","definition_xrefs":["PMID:24013502","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased spatial extent of centromeric heterochromatin assembly","termid":"FYPO:0004948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000641","FYPO:0000002"],"is_obsolete":false,"name":"heterochromatin assembly beyond boundary element IRC3L","synonyms":[{"name":"heterochromatin assembly beyond boundary element IRC3L during mitotic cell cycle","type":"related"},{"name":"heterochromatin assembly beyond boundary element IRC3L during vegetative growth","type":"exact"},{"name":"heterochromatin formation beyond boundary element IRC3L","type":"exact"}],"termid":"FYPO:0003046"}


id: GO:0005129
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a granulocyte macrophage colony-stimulating factor receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"granulocyte macrophage colony-stimulating factor receptor binding","synonyms":[{"name":"GM-CSF receptor binding","type":"exact"},{"name":"GM-CSF receptor ligand","type":"narrow"},{"name":"GMC-SF receptor ligand","type":"narrow"},{"name":"granulocyte macrophage colony stimulating factor receptor binding","type":"exact"},{"name":"granulocyte macrophage colony-stimulating factor","type":"narrow"},{"name":"granulocyte macrophage colony-stimulating factor receptor ligand","type":"narrow"}],"termid":"GO:0005129"}


id: PR:Q9USR4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rec27 gene.","definition_xrefs":["UniProtKB:Q9USR4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rec27 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC577.05c","synonyms":[{"name":"Spom972h-rec27","type":"exact"},{"name":"meiotically up-regulated gene 41 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USR4"}


id: GO:0034155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 7 signaling pathway.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039531"},{"relation_name":"regulates","term_name":"toll-like receptor 7 signaling pathway","termid":"GO:0034154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of toll-like receptor 7 signaling pathway","synonyms":[{"name":"regulation of TLR7 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 7 signalling pathway","type":"exact"}],"termid":"GO:0034155"}


id: FYPO:0002453
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells that have abnormal morphology (i.e. size, shape, or structure) and contain one or more septa apiece. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, septated cells with abnormal morphology (obsolete FYPO:0002453)","synonyms":[{"name":"inviable microcolony, septated vegetative cells with abnormal morphology","type":"exact"}],"termid":"FYPO:0002453"}


id: PBO:0036505
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human COQ5","termid":"PBO:0036505"}


id: PBO:0043477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin Pas1/PHO80 domain containing 1","termid":"PBO:0043477"}


id: GO:0007400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process in which a cell becomes capable of differentiating autonomously into a neuroblast cell regardless of its environment; upon determination, the cell fate cannot be reversed. An example of this process is found in Mus musculus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"neuroblast fate commitment","termid":"GO:0014017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroblast fate determination","secondary_identifiers":["GO:0007408","GO:0043348","GO:0043347"],"synonyms":[{"name":"neuroblast cell fate determination","type":"exact"},{"name":"neuroblast identity determination","type":"exact"}],"termid":"GO:0007400"}


id: PBO:0002776
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae VHT1","termid":"PBO:0002776"}


id: PBO:0044147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CST telomere replication complex component 1","termid":"PBO:0044147"}


id: PR:O42883
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC8E11.06 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C8E11.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8E11.06","synonyms":[{"name":"Spom972h-SPAC8E11.06","type":"exact"}],"termid":"PR:O42883"}


id: GO:1901508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of acylglycerol transport.","definition_xrefs":["GOC:TermGenie","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"regulation of acylglycerol transport","termid":"GO:1901506"},{"relation_name":"positively_regulates","term_name":"acylglycerol transport","termid":"GO:0034196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of acylglycerol transport","synonyms":[{"name":"activation of acylglycerol transport","type":"narrow"},{"name":"activation of glyceride transport","type":"narrow"},{"name":"positive regulation of glyceride transport","type":"exact"},{"name":"up regulation of acylglycerol transport","type":"exact"},{"name":"up regulation of glyceride transport","type":"exact"},{"name":"up-regulation of acylglycerol transport","type":"exact"},{"name":"up-regulation of glyceride transport","type":"exact"},{"name":"upregulation of acylglycerol transport","type":"exact"},{"name":"upregulation of glyceride transport","type":"exact"}],"termid":"GO:1901508"}


id: PBO:0078283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 16-1","termid":"PBO:0078283"}


id: PBO:0043559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COL5A1 antisense RNA 1","termid":"PBO:0043559"}


id: MOD:00701
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct with a compound containing a nucleotide or a polynucleotide through formation of either a phosphodiester bond, a phosphoramide ester bond, or a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide or nucleic acid modified residue","synonyms":[{"name":"NucRes","type":"exact"}],"termid":"MOD:00701"}


id: PBO:0057058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR142 host genes","termid":"PBO:0057058"}


id: GO:0046418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving nopaline, (N-(I-carboxy-4-guanidinobutyl)glutamic acid), a rare amino-acid derivative.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete nopaline metabolic process (obsolete GO:0046418)","synonyms":[{"name":"nopaline metabolism","type":"exact"}],"termid":"GO:0046418"}


id: PBO:0054787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2200","termid":"PBO:0054787"}


id: GO:0021545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cranial nerves over time, from its formation to the mature structure. The cranial nerves are composed of twelve pairs of nerves that emanate from the nervous tissue of the hindbrain. These nerves are sensory, motor, or mixed in nature, and provide the motor and general sensory innervation of the head, neck and viscera. They mediate vision, hearing, olfaction and taste and carry the parasympathetic innervation of the autonomic ganglia that control visceral functions.","definition_xrefs":["GOC:cls","GOC:dph","GOC:jid","ISBN:0838580343","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nerve development","termid":"GO:0021675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cranial nerve development","termid":"GO:0021545"}


id: GO:0043174
data:
  {"annotated_genes":["SJAG_06634","SJAG_01859","SJAG_03881","SJAG_01781","SJAG_01070","SJAG_02179","SJAG_05029","SJAG_04264","SJAG_00134","SJAG_03096"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94648,94649],"is_not":false,"summary":null,"term":"GO:0043174"},{"annotations":[112916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[104554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"},{"annotations":[85844,89813,111906,89590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006166"},{"annotations":[109881,93799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043097"}]},"cv_name":"biological_process","definition":"Any process which produces a nucleotide, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose (a deoxyribonucleotide), from derivatives of it without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside biosynthetic process","termid":"GO:0009163"},{"relation_name":"is_a","term_name":"cellular metabolic compound salvage","termid":"GO:0043094"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00134":null,"SJAG_01070":null,"SJAG_01781":null,"SJAG_01859":null,"SJAG_02179":null,"SJAG_03096":null,"SJAG_03881":null,"SJAG_04264":null,"SJAG_05029":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"nucleoside salvage","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043174","terms_by_termid":{"GO:0006166":null,"GO:0006169":null,"GO:0006190":null,"GO:0043097":null,"GO:0043174":null}}


id: GO:0017145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The self-renewing division of a stem cell. A stem cell is an undifferentiated cell, in the embryo or adult, that can undergo unlimited division and give rise to one or several different cell types.","definition_xrefs":["ISBN:0582227089","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stem cell division","synonyms":[{"name":"stem cell renewal","type":"exact"}],"termid":"GO:0017145"}


id: PBO:0074553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 6","termid":"PBO:0074553"}


id: PBO:0051657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine monophosphate dehydrogenase 2","termid":"PBO:0051657"}


id: PBO:0074631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 25B","termid":"PBO:0074631"}


id: GO:1905757
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98434],"is_not":false,"summary":null,"term":"GO:1905757"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of primary cell septum biogenesis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:27898700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mitotic division septum assembly","termid":"GO:0140280"},{"relation_name":"is_a","term_name":"regulation of primary cell septum biogenesis","termid":"GO:1905756"},{"relation_name":"negatively_regulates","term_name":"primary cell septum biogenesis","termid":"GO:0031671"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0000281"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0000281","GO:0007049"],"is_obsolete":false,"name":"negative regulation of primary cell septum biogenesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905757","terms_by_termid":{"GO:1905757":null}}


id: PBO:0088608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-I ortholog, inner centromere connector Mis6","termid":"PBO:0088608"}


id: PBO:0090722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic glutaminyl-tRNA ligase Qrs1","termid":"PBO:0090722"}


id: FYPO:0007912
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial localization is normal.","definition_xrefs":["PomBase:vw","PMID:10641037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal organelle localization","termid":"FYPO:0007913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000138","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal mitochondrial distribution","synonyms":[{"name":"normal mitochondrial localization","type":"exact"}],"termid":"FYPO:0007912"}


id: PBO:0087933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translational activator for mRNAs with internal ribosome entry sites; associates with polysomes and binds to a specific subset of mRNAs; localizes to RNA processing bodies (P bodies) and to stress granules; may have a role in translation regulation under stress conditions; ortholog of human ZNF9/CNBP, a gene involved in myotonic dystrophy type 2","termid":"PBO:0087933"}


id: GO:0016330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A discrete cell cycle in the third instar eye imaginal disc after progression of the morphogenetic furrow that contributes to compound eye morphogenesis. It is essential for generation of a sufficient pool of uncommitted cells to develop complete ommatidia.","definition_xrefs":["PMID:11257224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle","termid":"GO:0000278"},{"relation_name":"part_of","term_name":"compound eye morphogenesis","termid":"GO:0001745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"second mitotic wave involved in compound eye morphogenesis","synonyms":[{"name":"second mitotic wave during compound eye morphogenesis","type":"related"}],"termid":"GO:0016330"}


id: PBO:0079267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 39A","termid":"PBO:0079267"}


id: GO:0102884
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = zingiberene + diphosphoric acid.","definition_xrefs":["EC:4.2.3.65","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alpha-zingiberene synthase activity","secondary_identifiers":["MetaCyc:RXN-8425","RHEA:28643"],"termid":"GO:0102884"}


id: GO:0015424
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + amino acid(out/in) = ADP + phosphate + amino acid(in/out).","definition_xrefs":["GOC:mah","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ABC-type amino acid transporter activity","secondary_identifiers":["GO:0032520","GO:0032518"],"synonyms":[{"name":"ATP-dependent amino acid transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled amino acid transmembrane transporter activity","type":"related"},{"name":"amino acid ABC transporter","type":"narrow"},{"name":"amino acid-exporting ATPase activity","type":"related"},{"name":"amino acid-importing ATPase activity","type":"related"},{"name":"amino acid-transporting ATPase activity","type":"exact"}],"termid":"GO:0015424"}


id: PBO:0064513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II, I and III subunit K","termid":"PBO:0064513"}


id: PBO:0048786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha 15","termid":"PBO:0048786"}


id: GO:0006029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving proteoglycans, any glycoprotein in which the carbohydrate units are glycosaminoglycans.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein metabolic process","termid":"GO:0009100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proteoglycan metabolic process","synonyms":[{"name":"proteoglycan metabolism","type":"exact"},{"name":"proteoglycan sulfate transfer","type":"narrow"}],"termid":"GO:0006029"}


id: SO:0000865
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence that contains a mutation involving the deletion or insertion of one or more bases, where this number is not divisible by 3.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_attribute","termid":"SO:0000863"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frameshift","secondary_identifiers":["http://en.wikipedia.org/wiki/Frameshift"],"termid":"SO:0000865"}


id: GO:0046386
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"},{"annotations":[95048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of deoxyribose phosphate, the phosphorylated sugar 2-deoxy-erythro-pentose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribose phosphate metabolic process","termid":"GO:0019692"},{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"deoxyribose phosphate catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"deoxyribose phosphate breakdown","type":"exact"},{"name":"deoxyribose phosphate catabolism","type":"exact"},{"name":"deoxyribose phosphate degradation","type":"exact"}],"termid":"GO:0046386","terms_by_termid":{"GO:0035863":null,"GO:0046081":null}}


id: RO:0002131
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x overlaps y if and only if there exists some z such that x has part z and z part of y","direct_ancestors":[{"relation_name":"is_a","term_name":"mereotopologically_related_to","termid":"RO:0002323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"overlaps","termid":"RO:0002131"}


id: PBO:0048466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCLC antisense RNA 1","termid":"PBO:0048466"}


id: PBO:0043249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 8","termid":"PBO:0043249"}


id: PBO:0056927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major intrinsic protein of lens fiber","termid":"PBO:0056927"}


id: PR:Q09758
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein-cysteine N-palmitoyltransferase HHAT-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane-bound O-acyltransferase C24H6.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24H6.01c","secondary_identifiers":["UniProtKB:Q09758"],"synonyms":[{"name":"Spom972h-HHATL","type":"exact"}],"termid":"PR:Q09758"}


id: GO:0033185
data:
  {"annotated_genes":["SJAG_00831","SJAG_02903","SJAG_05219"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92483,99835,102762],"is_not":false,"summary":null,"term":"GO:0033185"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses dolichyl-phosphate beta-D-mannosyltransferase activity; contains a catalytic subunit, a regulatory subunit, and a third subunit that stabilizes the complex. In human and several other metazoa, the subunits are named DPM1, DPM2 and DPM3, respectively.","definition_xrefs":["PMID:10835346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase complex","termid":"GO:0031501"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00831":null,"SJAG_02903":null,"SJAG_05219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"dolichol-phosphate-mannose synthase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DPM synthase complex","type":"exact"},{"name":"dolichyl-phosphate beta-D-mannosyltransferase complex","type":"exact"}],"termid":"GO:0033185","terms_by_termid":{"GO:0033185":null}}


id: PBO:0073495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small G protein signaling modulator 1","termid":"PBO:0073495"}


id: PBO:0083615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dynein intermediate chain, microtubule motor protein; required for intracellular transport and cell division; acts in cytoplasmic dynein pathway; forms complex with dynein light chain Dyn2p that promotes Dyn1p homodimerization and potentiates motor processivity; Dyn2p-Pac11p complex is also important for interaction of dynein motor complex with dynactin complex; forms cortical cytoplasmic microtubule capture site with Num1p; essential in the absence of CIN8","termid":"PBO:0083615"}


id: GO:0046665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Maintenance of the amnioserosa, an epithelium that occupies a hole in the embryonic dorsal epidermis.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue homeostasis","termid":"GO:0001894"},{"relation_name":"part_of","term_name":"embryonic development via the syncytial blastoderm","termid":"GO:0001700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amnioserosa maintenance","termid":"GO:0046665"}


id: GO:0141032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of the host actin cytoskeleton by reorganizing the actin filaments, in a way that keeps the total filementous actin remains approximately constant. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:22212282","PMID:31130928"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host actin cytoskeleton","termid":"GO:0141027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host actin cytoskeleton via actin filament reorganization","synonyms":[{"name":"perturbation by symbiont of host actin cytoskeleton via actin filament rearrangement","type":"exact"},{"name":"perturbation by symbiont of host actin cytoskeleton via actin filament reorganization","type":"exact"}],"termid":"GO:0141032"}


id: PBO:0090831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Has1","termid":"PBO:0090831"}


id: GO:0071922
data:
  {"annotated_genes":["SJAG_00823","SJAG_03591","SJAG_01825","SJAG_05978","SJAG_01716"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111405,87789,102400,102303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905412"},{"annotations":[103460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905406"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a process in which a cohesin complex is transported to, or maintained at, a part of a chromosome that is organized into chromatin.","definition_xrefs":["GOC:mah","GOC:lb","PMID:17113138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sister chromatid cohesion","termid":"GO:0007063"},{"relation_name":"is_a","term_name":"regulation of protein localization to chromatin","termid":"GO:1905634"},{"relation_name":"regulates","term_name":"cohesin loading","termid":"GO:0071921"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00823":null,"SJAG_01716":null,"SJAG_01825":null,"SJAG_03591":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of cohesin loading","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cohesin association with chromatin","type":"exact"},{"name":"regulation of cohesin localisation to chromatin","type":"exact"},{"name":"regulation of cohesin localization to chromatin","type":"exact"}],"termid":"GO:0071922","terms_by_termid":{"GO:1905406":null,"GO:1905412":null}}


id: PBO:0066815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 114","termid":"PBO:0066815"}


id: PBO:0075935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST20-MTHFS readthrough","termid":"PBO:0075935"}


id: GO:1902751
data:
  {"annotated_genes":["SJAG_00256","SJAG_03067","SJAG_00883","SJAG_01805","SJAG_01901","SJAG_03309","SJAG_03592","SJAG_01837","SJAG_00214","SJAG_02342","SJAG_04140","SJAG_02592","SJAG_04486","SJAG_00216","SJAG_03602","SJAG_00117","SJAG_03486","SJAG_04597","SJAG_04332","SJAG_01456","SJAG_01000"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112750,87781,104626,88184,90600,107260,99556,84119,89858,106396,94494,90429,95058,97815,84128,112561,90468,103287,92390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010971"},{"annotations":[97440,83924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905287"},{"annotations":[90601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110032"}]},"cv_name":"biological_process","definition":"Any signaling pathway that activates or increases the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G2 phase to M phase of the cell cycle.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle phase transition","termid":"GO:1901989"},{"relation_name":"is_a","term_name":"regulation of cell cycle G2/M phase transition","termid":"GO:1902749"},{"relation_name":"positively_regulates","term_name":"cell cycle G2/M phase transition","termid":"GO:0044839"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00117":null,"SJAG_00214":null,"SJAG_00216":null,"SJAG_00256":null,"SJAG_00883":null,"SJAG_01000":null,"SJAG_01456":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01901":null,"SJAG_02342":null,"SJAG_02592":null,"SJAG_03067":null,"SJAG_03309":null,"SJAG_03486":null,"SJAG_03592":null,"SJAG_03602":null,"SJAG_04140":null,"SJAG_04332":null,"SJAG_04486":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell cycle G2/M phase transition","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cell cycle G2/M phase transition","type":"narrow"},{"name":"up regulation of cell cycle G2/M phase transition","type":"exact"},{"name":"up-regulation of cell cycle G2/M phase transition","type":"exact"},{"name":"upregulation of cell cycle G2/M phase transition","type":"exact"}],"termid":"GO:1902751","terms_by_termid":{"GO:0010971":null,"GO:0110032":null,"GO:1905287":null}}


id: PR:O14124
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3A11.10c gene.","definition_xrefs":["UniProtKB:O14124","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized dipeptidase C3A11.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.10c","synonyms":[{"name":"Spom972h-SPAC3A11.10c","type":"exact"}],"termid":"PR:O14124"}


id: GO:0019391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of glucuronosides, compound composed of a hydroxy compound linked to a glucuronate residue.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete glucuronoside catabolic process (obsolete GO:0019391)","synonyms":[{"name":"glucuronide catabolic process","type":"exact"},{"name":"glucuronide catabolism","type":"exact"},{"name":"glucuronoside breakdown","type":"exact"},{"name":"glucuronoside catabolism","type":"exact"},{"name":"glucuronoside degradation","type":"exact"}],"termid":"GO:0019391"}


id: FYPO:0001928
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which regulation of the mitotic cell cycle is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle","termid":"FYPO:0000411"},{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal regulation of mitotic cell cycle","synonyms":[{"name":"normal cell cycle regulation during vegetative growth","type":"exact"},{"name":"normal regulation of mitotic cell cycle during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001928"}


id: GO:0003053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism modulates its heart rate at different values with a regularity of approximately 24 hours.","definition_xrefs":["GOC:rl","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart rate","termid":"GO:0002027"},{"relation_name":"is_a","term_name":"circadian rhythm","termid":"GO:0007623"},{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian regulation of heart rate","synonyms":[{"name":"circadian regulation of heart contraction rate","type":"related"}],"termid":"GO:0003053"}


id: GO:0099111
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id: GO:0003936
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id: PBO:0002187
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  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-UBR1 type","termid":"PBO:0002187"}


id: PATO:0000615
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  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A malformed quality inhering in a bearer by virtue of the bearer's gross morphology containing only what are normally anterior structures.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malformed","termid":"PATO:0000646"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterioralized","termid":"PATO:0000615"}


id: GO:0090613
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5'deoxyadenosine + H2O = 5'deoxyinosine + NH3.","definition_xrefs":["PMID:23968233","RHEA:42892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"5'-deoxyadenosine deaminase activity","secondary_identifiers":["EC:3.5.4.41"],"termid":"GO:0090613"}


id: PBO:0071593
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 10","termid":"PBO:0071593"}


id: PBO:0073320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine incorporator 3","termid":"PBO:0073320"}


id: FYPO:0000257
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leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__cem1delta":{"display_name":"apc2-361(E548K ts) cem1delta","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__cem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01946:allele-1","expression":"Null"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts) oar2-51(Y189D cold sensitive)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-2","expression":"Not assayed or wild type"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression":{"display_name":"apc2-361(E548K ts) oar2-dm12(R72A,L75A,R106A,L109A aa)[Overexpression]","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-3","expression":"Overexpression"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2delta":{"display_name":"apc2-361(E548K ts) oar2delta","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-1","expression":"Null"}]}]},"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]},"cds1delta":{"display_name":"cds1delta","display_uniquename":"cds1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04287:allele-1","expression":"Null"}]}]},"chk1-P470L-P470L-amino_acid_mutation-expression-not_assayed_or_wild_type__rad24delta":{"display_name":"chk1-P470L(aa) rad24delta","display_uniquename":"chk1-P470L-P470L-amino_acid_mutation-expression-not_assayed_or_wild_type__rad24delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01680:allele-2","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02266:allele-1","expression":"Null"}]}]},"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"mid1-delta(711-723 a.a.)(aa)","display_uniquename":"mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-2","expression":"Not assayed or wild type"}]}]},"mrc1delta":{"display_name":"mrc1delta","display_uniquename":"mrc1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04671:allele-1","expression":"Null"}]}]},"ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235A/S651(S235A; S651 aa)","display_uniquename":"ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-3","expression":"Not assayed or wild type"}]}]},"ptp4delta":{"display_name":"ptp4delta","display_uniquename":"ptp4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04883:allele-1","expression":"Null"}]}]},"pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pyk1-A343T(aa)","display_uniquename":"pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02796:allele-1","expression":"Not assayed or wild type"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]},"sst4delta":{"display_name":"sst4delta","display_uniquename":"sst4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03250:allele-1","expression":"Null"}]}]},"ste6delta":{"display_name":"ste6delta","display_uniquename":"ste6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02486:allele-1","expression":"Null"}]}]},"tel1delta":{"display_name":"tel1delta","display_uniquename":"tel1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03720:allele-1","expression":"Null"}]}]}},"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03575","SJAG_02621","SJAG_01680","SJAG_02266","SJAG_01946","SJAG_03689","SJAG_03118","SJAG_03198"],"name":"normal phenotype","references_by_uniquename":{"PMID:23090706":null,"PMID:23786411":null,"PMID:25318672":null,"PMID:25866389":null,"PMID:26774782":null,"PMID:29566183":null,"PMID:31956022":null,"PMID:32109380":null,"PMID:35226668":null,"PMID:36695178":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_01458","SJAG_00601","SJAG_01355","SJAG_02796","SJAG_03720","SJAG_00426","SJAG_02763","SJAG_04671","SJAG_02486","SJAG_04883","SJAG_01143","SJAG_03689","SJAG_03250","SJAG_04287"],"single_locus_genotype_uniquenames":["bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","sst4delta","pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type","rip1delta","ste6delta","acb1delta","mrc1delta","dcr1delta","ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type","cds1delta","tel1delta","cox6delta","ptp4delta","mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"fission yeast normal phenotype","type":"exact"},{"name":"no obvious phenotype","type":"exact"}],"termid":"FYPO:0000257","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000015":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000579":null,"FYPO:0000590":null,"FYPO:0000596":null,"FYPO:0000644":null,"FYPO:0000674":null,"FYPO:0000719":null,"FYPO:0000760":null,"FYPO:0001007":null,"FYPO:0001357":null,"FYPO:0001690":null,"FYPO:0003751":null,"FYPO:0003780":null,"FYPO:0004165":null,"FYPO:0004693":null,"FYPO:0006989":null,"FYPO:0007790":null,"FYPO_EXT:0000001":null}}


id: PBO:0035910
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K5_acetylation_during_vegetative_growth","termid":"PBO:0035910"}


id: PBO:0082578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Choline kinase; catalyzes the first step in phosphatidylcholine synthesis via the CDP-choline (Kennedy pathway); exhibits some ethanolamine kinase activity contributing to phosphatidylethanolamine synthesis via the CDP-ethanolamine pathway; CKI1 has a paralog, EKI1, that arose from the whole genome duplication","termid":"PBO:0082578"}


id: PBO:0073973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 24","termid":"PBO:0073973"}


id: GO:0062080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a MHC class Ib protein complex to mediate signaling that inhibits activation of a lymphocyte.","definition_xrefs":["DOI:10.1002/9780470015902.a0024246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC class Ib receptor activity","termid":"GO:0032394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"inhibitory MHC class Ib receptor activity","termid":"GO:0062080"}


id: PBO:0074106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC28A2 antisense RNA 1","termid":"PBO:0074106"}


id: PBO:0091633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP-dependent aldo/keto reductase, unknown biological role, implicated in cellular detoxification","termid":"PBO:0091633"}


id: PBO:0055802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophosphatidic acid receptor 4","termid":"PBO:0055802"}


id: MOD:00173
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to N-threonyl-glycosylphosphatidylinositolethanolamine.","definition_xrefs":["RESID:AA0164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylphosphatidylinositolated residue","termid":"MOD:00818"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-threonyl-glycosylphosphatidylinositolethanolamine","synonyms":[{"name":"GPIThr","type":"exact"},{"name":"LIPID GPI-anchor amidated threonine","type":"exact"},{"name":"N-threonyl-glycosylphosphatidylinositolethanolamine","type":"exact"}],"termid":"MOD:00173"}


id: PBO:0027016
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_catalytic_activity","termid":"PBO:0027016"}


id: FYPO:0003931
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell has no septum and is inviable.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"aseptate","termid":"FYPO:0000949"},{"relation_name":"has_part","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"is_a","term_name":"aseptate","termid":"FYPO:0000949"},{"relation_name":"is_a","term_name":"inviable vegetative cell","termid":"FYPO:0001489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000004","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000032","FYPO:0000631"],"is_obsolete":false,"name":"inviable aseptate vegetative cell","synonyms":[{"name":"inviable aseptate cell during mitotic cell cycle","type":"related"},{"name":"inviable aseptate cell during vegetative growth","type":"exact"},{"name":"lethal; aseptate vegetative cell","type":"exact"}],"termid":"FYPO:0003931"}


id: GO:0032792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the activity of the transcription factor CREB.","definition_xrefs":["GOC:ecd","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-binding transcription factor activity","termid":"GO:0043433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0008150","GO:0006355"],"is_obsolete":false,"name":"negative regulation of CREB transcription factor activity","synonyms":[{"name":"CREB inhibitor","type":"related"},{"name":"inhibition of CREB transcription factor","type":"exact"}],"termid":"GO:0032792"}


id: FYPO:0007007
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which the frequency of DNA recombination is normal (i.e. indistinguishable from wild type) downstream of DNA replication fork barriers.","definition_xrefs":["PMID:30667359","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal DNA recombination frequency downstream of mitotic DNA replication fork barriers","synonyms":[{"name":"normal DNA recombination frequency downstream of mitotic DNA replication fork barriers during mitotic cell cycle","type":"related"},{"name":"normal DNA recombination frequency downstream of mitotic DNA replication fork barriers during vegetative growth","type":"exact"},{"name":"normal template switching recombination frequency downstream of mitotic DNA replication fork barriers","type":"exact"}],"termid":"FYPO:0007007"}


id: PBO:0061552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NT5C3A pseudogene 2","termid":"PBO:0061552"}


id: GO:0097746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the diameter of blood vessels.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular process in circulatory system","termid":"GO:0003018"},{"relation_name":"is_a","term_name":"regulation of tube diameter","termid":"GO:0035296"},{"relation_name":"part_of","term_name":"blood circulation","termid":"GO:0008015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood vessel diameter maintenance","secondary_identifiers":["GO:0050880","GO:0042312"],"synonyms":[{"name":"blood vessel diameter homeostasis","type":"exact"},{"name":"regulation of blood vessel diameter","type":"exact"},{"name":"regulation of blood vessel size","type":"related"},{"name":"regulation of vasodilatation","type":"related"},{"name":"regulation of vasodilation","type":"related"}],"termid":"GO:0097746"}


id: FYPO:0006083
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A sporulation phenotype in which asci that contain four spores form following conjugation and subsequent sporulation, but sporulation is not entirely normal.","definition_xrefs":["PMID:28011631","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation","termid":"FYPO:0000121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000121","FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal sporulation resulting in formation of ascus with four spores","synonyms":[{"name":"ascospore formation resulting in formation of asci with four spores","type":"exact"},{"name":"normal spore number","type":"exact"},{"name":"sporulation resulting in formation of asci with four spores","type":"exact"}],"termid":"FYPO:0006083"}


id: PBO:0060626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCK associated protein 5","termid":"PBO:0060626"}


id: PBO:0001936
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates genes involved in thiamin biosynthesis","termid":"PBO:0001936"}


id: FYPO:0002888
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the mitotic cell cycle is arrested after the septum has formed, but before cells have separated, under conditions where arrest does not normally occur.","definition_xrefs":["PMID:8978671","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormally arrested mitotic cell cycle progression","termid":"FYPO:0000502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"mitotic cell cycle arrest before cell separation","synonyms":[{"name":"cell cycle arrest before cell separation during mitotic cell cycle","type":"exact"},{"name":"mitotic cell cycle arrest before cell separation after cytokinesis","type":"exact"},{"name":"mitotic cell cycle arrest before cell separation during vegetative growth","type":"exact"},{"name":"mitotic cell cycle arrest before mitotic cytokinetic cell separation","type":"exact"}],"termid":"FYPO:0002888"}


id: PBO:0059473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSL complex subunit 3","termid":"PBO:0059473"}


id: FYPO:0006577
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of P(1),P(4)-bis(5'-adenosyl) tetraphosphate (Ap4A) measured in a cell is higher than normal.","definition_xrefs":["PMID:10970777","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular P(1),P(4)-bis(5'-adenosyl) tetraphosphate level","synonyms":[{"name":"increased P(1),P(4)-bis(5'-adenosyl) tetraphosphate accumulation","type":"related"},{"name":"increased cellular Ap4A level","type":"exact"},{"name":"increased cellular P(1),P(4)-bis(5'-adenosyl) tetraphosphate level during mitotic cell cycle","type":"related"},{"name":"increased cellular P(1),P(4)-bis(5'-adenosyl) tetraphosphate level during vegetative growth","type":"exact"},{"name":"increased cellular diadenosine 5',5'''-P1,P4-tetraphosphate level","type":"related"},{"name":"increased cellular diadenosine tetraphosphate level","type":"related"},{"name":"increased cellular diadenosyl tetraphosphate level","type":"broad"}],"termid":"FYPO:0006577"}


id: PBO:0087817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIID subunit (150 kDa); involved in RNA polymerase II transcription initiation","termid":"PBO:0087817"}


id: GO:0014037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a Schwann cell. Schwann cells are found in the peripheral nervous system, where they insulate neurons and axons, and regulate the environment in which neurons function.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell differentiation","termid":"GO:0010001"},{"relation_name":"part_of","term_name":"peripheral nervous system development","termid":"GO:0007422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Schwann cell differentiation","termid":"GO:0014037"}


id: PBO:0086372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative aryl-alcohol dehydrogenase; involved in oxidative stress response; similar to P. chrysosporium aryl-alcohol dehydrogenase; expression induced in cells treated with the mycotoxin patulin; members of the AAD gene family comprise three pairs (AAD3 + AAD15, AAD6/AAD16 + AAD4, AAD10 + AAD14) whose two genes are more related to one another than to other members of the family","termid":"PBO:0086372"}


id: PBO:0004752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Ste11","termid":"PBO:0004752"}


id: FYPO:0006285
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the duration of localization of a protein to the telomere of a chromosome is longer than normal during anaphase B of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of protein localization to telomere","termid":"FYPO:0005649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"increased duration of protein localization to telomere during mitotic anaphase B","synonyms":[{"name":"increased duration of protein localisation to telomere during mitotic anaphase B","type":"exact"},{"name":"increased duration of protein localization to chromosome, telomeric region during mitotic anaphase B","type":"exact"},{"name":"increased duration of protein localization to telomere during anaphase B during vegetative growth","type":"exact"},{"name":"increased duration of protein localization to telomere during anaphase B of mitotic cell cycle","type":"exact"},{"name":"increased duration of protein localization to telomeric region during mitotic anaphase B","type":"exact"},{"name":"prolonged protein localization to telomere during mitotic anaphase B","type":"exact"}],"termid":"FYPO:0006285"}


id: PBO:0026661
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_inositol_starvation","termid":"PBO:0026661"}


id: PBO:0005013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Alg11","termid":"PBO:0005013"}


id: PBO:0003518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid phosphatase (predicted)","termid":"PBO:0003518"}


id: MOD:01021
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiocresyl","termid":"MOD:01021"}


id: PBO:0077616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMSB4X pseudogene 7","termid":"PBO:0077616"}


id: FYPO:0000059
data:
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cell cycle defects","type":"exact"},{"name":"mitotic cell cycle: abnormal","type":"related"}],"termid":"FYPO:0000059","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000118":null,"FYPO:0000231":null,"FYPO:0000324":null,"FYPO:0000618":null,"FYPO:0000619":null,"FYPO:0000671":null,"FYPO:0000729":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0002998":null,"FYPO:0003738":null,"FYPO:0004318":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0030207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of chondroitin sulfate, any member of a group of 10-60 kDa glycosaminoglycans, widely distributed in cartilage and other mammalian connective tissues, the repeat units of which consist of beta-(1,4)-linked D-glucuronyl beta-(1,3)-N-acetyl-D-galactosamine sulfate.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan catabolic process","termid":"GO:0006027"},{"relation_name":"is_a","term_name":"chondroitin sulfate metabolic process","termid":"GO:0030204"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006790"],"is_obsolete":false,"name":"chondroitin sulfate catabolic process","secondary_identifiers":["MetaCyc:PWY-6572","MetaCyc:PWY-6573"],"synonyms":[{"name":"chondroitin sulfate breakdown","type":"exact"},{"name":"chondroitin sulfate catabolism","type":"exact"},{"name":"chondroitin sulfate degradation","type":"exact"},{"name":"chondroitin sulphate catabolic process","type":"exact"},{"name":"chondroitin sulphate catabolism","type":"exact"}],"termid":"GO:0030207"}


id: PR:O14299
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wis4 gene.","definition_xrefs":["UniProtKB:O14299","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase kinase kinase wis4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9G1.02","synonyms":[{"name":"MAP kinase kinase kinase wak1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MAP kinase kinase kinase wik1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-wis4","type":"exact"}],"termid":"PR:O14299"}


id: GO:0010470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of gastrulation. Gastrulation is the complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"regulation of embryonic development","termid":"GO:0045995"},{"relation_name":"regulates","term_name":"gastrulation","termid":"GO:0007369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of gastrulation","termid":"GO:0010470"}


id: GO:0004971
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An ionotropic glutamate receptor activity that exhibits fast gating by glutamate and acts by opening a cation channel permeable to sodium, potassium, and, in the absence of a GluR2 subunit, calcium.","definition_xrefs":["GOC:mah","PMID:8804111","PMID:10049997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate-gated receptor activity","termid":"GO:0004970"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transporter activity","termid":"GO:0022890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0038023","GO:0003674"],"is_obsolete":false,"name":"AMPA glutamate receptor activity","synonyms":[{"name":"AMPA receptor activity","type":"exact"},{"name":"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity","type":"exact"}],"termid":"GO:0004971"}


id: GO:0031234
data:
  {"annotated_genes":["SJAG_02444","SJAG_02233","SJAG_02605","SJAG_03081","SJAG_04026"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[106593],"is_not":false,"summary":null,"term":"GO:0031234"},{"annotations":[90284,102537,103184,105063],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005834"}]},"cv_name":"cellular_component","definition":"The component of a plasma membrane consisting of gene products and protein complexes that are loosely bound to its cytoplasmic surface, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of plasma membrane","termid":"GO:0019897"},{"relation_name":"part_of","term_name":"cytoplasmic side of plasma membrane","termid":"GO:0009898"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02233":null,"SJAG_02444":null,"SJAG_02605":null,"SJAG_03081":null,"SJAG_04026":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"extrinsic component of cytoplasmic side of plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"extrinsic to cytoplasmic side of plasma membrane","type":"narrow"},{"name":"extrinsic to internal leaflet of plasma membrane","type":"exact"},{"name":"extrinsic to internal side of plasma membrane","type":"exact"}],"termid":"GO:0031234","terms_by_termid":{"GO:0005834":null,"GO:0031234":null}}


id: PBO:0065879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB30, member RAS oncogene family","termid":"PBO:0065879"}


id: GO:0010438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of sulfur.","definition_xrefs":["PMID:17420480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sulfur starvation","termid":"GO:0010438"}


id: PBO:0031759
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_MCM_complex_assembly","termid":"PBO:0031759"}


id: PR:P36594
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit RPB1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02936","PRO:DNx","PANTHER:PTHR19376:SF14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28F2.12","secondary_identifiers":["UniProtKB:P36594"],"synonyms":[{"name":"DNA-directed RNA polymerase III largest subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II subunit 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II subunit B1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR2A","type":"exact"}],"termid":"PR:P36594"}


id: PBO:0034226
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_immediately_upstream_of_sequence_of","termid":"PBO:0034226"}


id: GO:0045825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of intermediate filament polymerization and/or depolymerization.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of intermediate filament polymerization and/or depolymerization (obsolete GO:0045825)","synonyms":[{"name":"negative regulation of intermediate filament polymerization and/or depolymerization","type":"exact"}],"termid":"GO:0045825"}


id: GO:1904406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nitric oxide metabolic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11991626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of nitric oxide metabolic process","termid":"GO:0080164"},{"relation_name":"negatively_regulates","term_name":"nitric oxide metabolic process","termid":"GO:0046209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nitric oxide metabolic process","synonyms":[{"name":"down regulation of nitric oxide metabolic process","type":"exact"},{"name":"down regulation of nitric oxide metabolism","type":"exact"},{"name":"down-regulation of nitric oxide metabolic process","type":"exact"},{"name":"down-regulation of nitric oxide metabolism","type":"exact"},{"name":"downregulation of nitric oxide metabolic process","type":"exact"},{"name":"downregulation of nitric oxide metabolism","type":"exact"},{"name":"inhibition of nitric oxide metabolic process","type":"narrow"},{"name":"inhibition of nitric oxide metabolism","type":"narrow"},{"name":"negative regulation of nitric oxide metabolism","type":"exact"}],"termid":"GO:1904406"}


id: GO:0070794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of conidiophore development, a process that leads to the formation of a conidiophore. The conidiophore is a specialized hypha that extends aerially from the growth substrate and bears conidia, or asexual spores.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of conidiophore development","termid":"GO:0070793"},{"relation_name":"is_a","term_name":"negative regulation of spore-bearing organ development","termid":"GO:0075262"},{"relation_name":"negatively_regulates","term_name":"conidiophore development","termid":"GO:0070787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of conidiophore development","termid":"GO:0070794"}


id: PBO:0055446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2877","termid":"PBO:0055446"}


id: GO:1900741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to pH.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900428"},{"relation_name":"regulates","term_name":"filamentous growth of a population of unicellular organisms in response to pH","termid":"GO:0036177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of filamentous growth of a population of unicellular organisms in response to pH","termid":"GO:1900741"}


id: GO:0021535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell that will reside in the hindbrain.","definition_xrefs":["GOC:cls","GOC:dph","GOC:jid","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"hindbrain development","termid":"GO:0030902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration in hindbrain","termid":"GO:0021535"}


id: PBO:0003117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine-uridine preferring nucleoside hydrolase (predicted)","termid":"PBO:0003117"}


id: PBO:0088126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane polyphosphate polymerase; subunit of the vacuolar transporter chaperone (VTC) complex involved in synthesis and transfer of polyP to the vacuole; regulates membrane trafficking; role in non-autophagic vacuolar fusion; protein abundance increases in response to DNA replication stress","termid":"PBO:0088126"}


id: PBO:0080078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 40","termid":"PBO:0080078"}


id: GO:0061111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in the transfer of information from an epithelial cell to a mesenchymal cell and contributes to the progression of the lung over time from its initial formation to the mature organ.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling involved in lung development","termid":"GO:0060495"},{"relation_name":"is_a","term_name":"epithelial-mesenchymal cell signaling","termid":"GO:0060684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"epithelial-mesenchymal cell signaling involved in lung development","synonyms":[{"name":"epithelial-mesenchymal cell signalling involved in lung development","type":"exact"}],"termid":"GO:0061111"}


id: PR:Q9Y7S3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC569.04 gene.","definition_xrefs":["UniProtKB:Q9Y7S3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C569.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC569.04","synonyms":[{"name":"Spom972h-SPCC569.04","type":"exact"}],"termid":"PR:Q9Y7S3"}


id: GO:0070959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the directed killing of a fungal cell by a neutrophil.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of fungus","termid":"GO:0070953"},{"relation_name":"is_a","term_name":"negative regulation of neutrophil mediated killing of symbiont cell","termid":"GO:0070955"},{"relation_name":"negatively_regulates","term_name":"neutrophil-mediated killing of fungus","termid":"GO:0070947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil mediated killing of fungus","synonyms":[{"name":"down regulation of neutrophil mediated killing of fungus","type":"exact"},{"name":"down-regulation of neutrophil mediated killing of fungus","type":"exact"},{"name":"downregulation of neutrophil mediated killing of fungus","type":"exact"},{"name":"inhibition of neutrophil mediated killing of fungus","type":"narrow"}],"termid":"GO:0070959"}


id: PBO:0065201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 31","termid":"PBO:0065201"}


id: PBO:0058685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6813","termid":"PBO:0058685"}


id: PBO:0073568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sonic hedgehog signaling molecule","termid":"PBO:0073568"}


id: GO:2001175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H2B conserved C-terminal lysine ubiquitination.","definition_xrefs":["PMID:17576814"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H2B conserved C-terminal lysine ubiquitination (obsolete GO:2001175)","synonyms":[{"name":"positive regulation of budding yeast H2B K123 ubiquitination","type":"related"},{"name":"positive regulation of fission yeast H2B K119 ubiquitination","type":"related"},{"name":"positive regulation of mammalian H2B K120 ubiquitination","type":"related"}],"termid":"GO:2001175"}


id: GO:0008166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete viral replication (obsolete GO:0008166)","synonyms":[{"name":"viral replication","type":"exact"}],"termid":"GO:0008166"}


id: PBO:0066798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 97","termid":"PBO:0066798"}


id: GO:0106368
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2'-deoxyribonucleoside 5'-phosphate + dTTP = a 2'-deoxyribonucleoside 5'-diphosphate + dTDP.","definition_xrefs":["RHEA:62132","PMID:20497505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"},{"relation_name":"is_a","term_name":"nucleobase-containing compound kinase activity","termid":"GO:0019205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(deoxy)nucleoside phosphate kinase activity, dTTP as phosphate donor","termid":"GO:0106368"}


id: GO:0062159
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A non-membrane-bounded organelle of eukaryotic cells, especially Protozoa, that fills with water from the cytoplasm and then discharges this externally. One of its functions is osmoregulatory.","definition_xrefs":["PMID:23890380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"contractile vacuole complex","synonyms":[{"name":"CVC","type":"related"}],"termid":"GO:0062159"}


id: PR:O94611
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug65 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94611"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 65 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1296.04","synonyms":[{"name":"Spom972h-mug65","type":"exact"}],"termid":"PR:O94611"}


id: PBO:0059818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 44","termid":"PBO:0059818"}


id: PR:O60080
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase DDX56 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO05031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase dbp9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1494.06c","secondary_identifiers":["UniProtKB:O60080"],"synonyms":[{"name":"Spom972h-DDX56","type":"exact"}],"termid":"PR:O60080"}


id: PBO:0068180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 487","termid":"PBO:0068180"}


id: GO:0098972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of mitochondria along microtubules in dendrites towards the postsynapse and away from the cell body.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterograde dendritic transport","termid":"GO:0098937"},{"relation_name":"is_a","term_name":"dendritic transport of mitochondrion","termid":"GO:0098939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"anterograde dendritic transport of mitochondrion","termid":"GO:0098972"}


id: PBO:0040273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atonal bHLH transcription factor 7","termid":"PBO:0040273"}


id: PBO:0108835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phosphatase Siw14","termid":"PBO:0108835"}


id: PBO:0078482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 5-2","termid":"PBO:0078482"}


id: PBO:0003694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mdm10/Mdm12/Mmm1 complex subunit Mdm12","termid":"PBO:0003694"}


id: GO:0098945
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the presynaptic active zone membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of presynaptic active zone membrane (obsolete GO:0098945)","synonyms":[{"name":"intrinsic to presynaptic active zone membrane","type":"narrow"}],"termid":"GO:0098945"}


id: PATO:0001734
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a plant by virtue of the bearer's disposition to being between evergeen and deciduous.","definition_xrefs":["PATOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shedability","termid":"PATO:0001729"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semi-deciduous(plant)","termid":"PATO:0001734"}


id: PBO:0076270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntabulin","termid":"PBO:0076270"}


id: PBO:0063149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAT1 homolog 2","termid":"PBO:0063149"}


id: GO:0009611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to wounding","secondary_identifiers":["GO:0002245"],"synonyms":[{"name":"physiological response to wounding","type":"exact"}],"termid":"GO:0009611"}


id: PBO:0038808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 12","termid":"PBO:0038808"}


id: PBO:0089108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces japonicus specific protein some similarity to proteases","termid":"PBO:0089108"}


id: PBO:0077229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane channel like 5","termid":"PBO:0077229"}


id: PBO:0004750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c heme lyase (predicted)","termid":"PBO:0004750"}


id: FYPO:0003328
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule organization phenotype observed in the vegetative growth phase of the life cycle in which the orientation of cytoplasmic microtubules within a cell is abnormal during interphase of the mitotic cell cycle. The normal orientation is parallel to the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal interphase microtubules","termid":"FYPO:0006101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0000054","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"misoriented interphase microtubules","synonyms":[{"name":"misoriented cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"misoriented interphase cytoplasmic microtubules","type":"exact"},{"name":"misoriented interphase microtubules during mitotic cell cycle","type":"related"},{"name":"misoriented interphase microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0003328"}


id: PBO:0052993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LAMA4 antisense RNA 1","termid":"PBO:0052993"}


id: GO:0098912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which atrial cardiac muscle cell membrane potential changes in the depolarizing direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane depolarization during cardiac muscle cell action potential","termid":"GO:0086012"},{"relation_name":"part_of","term_name":"atrial cardiac muscle cell action potential","termid":"GO:0086014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"membrane depolarization during atrial cardiac muscle cell action potential","synonyms":[{"name":"atrial cardiac muscle cell depolarization","type":"broad"},{"name":"atrial depolarization","type":"related"},{"name":"electrocardiogram PR interval","type":"related"}],"termid":"GO:0098912"}


id: SO:0002288
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Ngaro retrotransposons are members of the YR_retrotransposon (SO:0002286) superfamily with the following protein domains: RT, RH, YR. RT is a reverse transcriptase. RH is RNAse H. YR is Tyrosine recombinase. Inverted terminal repeats (ITRs) in Ngaro are arranged in A-pol-B-A-B order where A and B represent ITRs.","definition_xrefs":["PMID:24086727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"YR_retrotransposon","termid":"SO:0002286"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ngaro_YR_retrotransposon","synonyms":[{"name":"Ngaro YR retrotransposon","type":"exact"},{"name":"Ngaro retrotransposon","type":"exact"},{"name":"RYN retrotransposon","type":"exact"}],"termid":"SO:0002288"}


id: GO:0080181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the formation of branches in lateral roots.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of a branching structure","termid":"GO:0001763"},{"relation_name":"part_of","term_name":"lateral root morphogenesis","termid":"GO:0010102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral root branching","termid":"GO:0080181"}


id: GO:0110162
data:
  {"annotated_genes":["SJAG_00244"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111116],"is_not":false,"summary":null,"term":"GO:0110162"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the cell cycle process in which the distance is lengthened between poles of the mitotic spindle during mitotic anaphase B (spindle phase three).","definition_xrefs":["PMID:27697865","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic spindle elongation","termid":"GO:0032888"},{"relation_name":"is_a","term_name":"regulation of mitotic spindle organization","termid":"GO:0060236"},{"relation_name":"regulates","term_name":"mitotic spindle elongation (spindle phase three)","termid":"GO:0061805"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00244":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0000226","GO:0008150","GO:0007010","GO:0007049"],"is_obsolete":false,"name":"regulation of mitotic spindle elongation (spindle phase three)","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110162","terms_by_termid":{"GO:0110162":null}}


id: PBO:0029585
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_RNA_catabolic_process_during_vegetative_growth","termid":"PBO:0029585"}


id: PBO:0039837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 6","termid":"PBO:0039837"}


id: GO:0017003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent linkage of heme and a protein.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-tetrapyrrole linkage","termid":"GO:0017006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-heme linkage","synonyms":[{"name":"protein-haem linkage","type":"exact"}],"termid":"GO:0017003"}


id: PBO:0108697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGEF Sec74","termid":"PBO:0108697"}


id: PATO:0000960
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000960 absolute opacity (obsolete PATO:0000960)","termid":"PATO:0000960"}


id: PBO:0075426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated antigen 16","termid":"PBO:0075426"}


id: RO:0002212
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Process(P1) negatively regulates process(P2) iff: P1 terminates P2, or P1 descreases the the frequency of initiation of P2 or the magnitude or rate of output of P2.","direct_ancestors":[{"relation_name":"is_a","term_name":"regulates","termid":"RO:0002211"},{"relation_name":"is_a","term_name":"causally_upstream_of,_negative_effect","termid":"RO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negatively_regulates","termid":"RO:0002212"}


id: GO:0044384
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The external membrane of Gram-negative bacteria or certain organelles such as mitochondria and chloroplasts; freely permeable to most ions and metabolites, occurring in a host cell.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host outer membrane","synonyms":[{"name":"host cell outer membrane","type":"related"}],"termid":"GO:0044384"}


id: PBO:0077244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domains 5A","termid":"PBO:0077244"}


id: GO:0032027
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a light chain of a myosin complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin binding","termid":"GO:0017022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515","GO:0008092"],"is_obsolete":false,"name":"myosin light chain binding","termid":"GO:0032027"}


id: PBO:0052956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KXD1 antisense RNA 1","termid":"PBO:0052956"}


id: GO:0098501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of removing one or more phosphate groups from a polynucleotide.","definition_xrefs":["GOC:DOS"],"gene_count":0,"genotype_count":0,"name":"obsolete polynucleotide dephosphorylation (obsolete GO:0098501)","termid":"GO:0098501"}


id: GO:1900209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiolipin metabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiolipin metabolic process","termid":"GO:1900208"},{"relation_name":"is_a","term_name":"negative regulation of phospholipid metabolic process","termid":"GO:1903726"},{"relation_name":"negatively_regulates","term_name":"cardiolipin metabolic process","termid":"GO:0032048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiolipin metabolic process","synonyms":[{"name":"down regulation of cardiolipin metabolic process","type":"exact"},{"name":"down regulation of cardiolipin metabolism","type":"exact"},{"name":"down regulation of diphosphatidylglycerol metabolic process","type":"related"},{"name":"down regulation of diphosphatidylglycerol metabolism","type":"related"},{"name":"down-regulation of cardiolipin metabolic process","type":"exact"},{"name":"down-regulation of cardiolipin metabolism","type":"exact"},{"name":"down-regulation of diphosphatidylglycerol metabolic process","type":"related"},{"name":"down-regulation of diphosphatidylglycerol metabolism","type":"related"},{"name":"downregulation of cardiolipin metabolic process","type":"exact"},{"name":"downregulation of cardiolipin metabolism","type":"exact"},{"name":"downregulation of diphosphatidylglycerol metabolic process","type":"related"},{"name":"downregulation of diphosphatidylglycerol metabolism","type":"related"},{"name":"inhibition of cardiolipin metabolic process","type":"narrow"},{"name":"inhibition of cardiolipin metabolism","type":"exact"},{"name":"inhibition of diphosphatidylglycerol metabolic process","type":"related"},{"name":"inhibition of diphosphatidylglycerol metabolism","type":"related"},{"name":"negative regulation of cardiolipin metabolism","type":"exact"},{"name":"negative regulation of diphosphatidylglycerol metabolic process","type":"related"},{"name":"negative regulation of diphosphatidylglycerol metabolism","type":"related"}],"termid":"GO:1900209"}


id: PR:Q09923
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized oxidoreductase YdjG that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01759","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase yakc [NADP(+)] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F7.12","secondary_identifiers":["UniProtKB:Q09923"],"synonyms":[{"name":"Spom972h-ydjG","type":"exact"}],"termid":"PR:Q09923"}


id: GO:0006483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The hydroxylation of peptidyl-aspartic acid or asparagine.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-aspartic acid/asparagine hydroxylation (obsolete GO:0006483)","synonyms":[{"name":"aspartic acid/asparagine hydroxylation","type":"exact"},{"name":"peptidyl-aspartic acid/asparagine hydroxylation","type":"exact"}],"termid":"GO:0006483"}


id: GO:0060025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptic activity, the controlled release of neurotransmitters into the synaptic cleft and their subsequent detection by a postsynaptic cell.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"part_of","term_name":"regulation of synapse structure or activity","termid":"GO:0050803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of synaptic activity","termid":"GO:0060025"}


id: PBO:0071639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 3","termid":"PBO:0071639"}


id: GO:0048323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into an axial mesoderm cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate determination","termid":"GO:0007500"},{"relation_name":"part_of","term_name":"axial mesodermal cell fate commitment","termid":"GO:0048322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axial mesodermal cell fate determination","synonyms":[{"name":"axial mesoderm cell fate determination","type":"exact"}],"termid":"GO:0048323"}


id: GO:0047350
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-phospho-alpha-D-glucuronate + UTP = diphosphate + UDP-alpha-D-glucuronate.","definition_xrefs":["EC:2.7.7.44","RHEA:16325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uridylyltransferase activity","termid":"GO:0070569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016779","GO:0003824"],"is_obsolete":false,"name":"glucuronate-1-phosphate uridylyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01381","MetaCyc:2.7.7.44-RXN"],"synonyms":[{"name":"UDP-D-glucuronic acid pyrophosphorylase activity","type":"related"},{"name":"UDP-glucuronate pyrophosphorylase activity","type":"related"},{"name":"UDP-glucuronic acid pyrophosphorylase activity","type":"related"},{"name":"UTP:1-phospho-alpha-D-glucuronate uridylyltransferase activity","type":"related"},{"name":"UTP:glucuronate-1-phosphate uridylyltransferase activity","type":"exact"},{"name":"uridine diphosphoglucuronic pyrophosphorylase activity","type":"related"}],"termid":"GO:0047350"}


id: PBO:0076227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPT16 homolog, facilitates chromatin remodeling subunit","termid":"PBO:0076227"}


id: GO:0043659
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A double-enveloped cell compartment, composed of an endosymbiont with its plasmalemma (as inner envelope) and a non-endosymbiotic outer envelope (the perisymbiontic membrane).","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytic vesicle","termid":"GO:0030139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"symbiosome","termid":"GO:0043659"}


id: GO:0034409
data:
  {"annotated_genes":["SJAG_03587","SJAG_04771","SJAG_04666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[83594,88468],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds, found in the walls of ascospores.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ascospore wall beta-glucan metabolic process","termid":"GO:0034408"},{"relation_name":"is_a","term_name":"fungal-type cell wall (1->3)-beta-D-glucan metabolic process","termid":"GO:0071969"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03587":null,"SJAG_04666":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0030437"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0005975","GO:0044085","GO:0008150","GO:0007049","GO:0030437"],"is_obsolete":false,"name":"ascospore wall (1->3)-beta-D-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ascospore wall 1,3-beta-D-glucan metabolic process","type":"exact"},{"name":"ascospore wall 1,3-beta-glucan metabolic process","type":"broad"},{"name":"ascospore wall 1,3-beta-glucan metabolism","type":"exact"},{"name":"ascospore wall beta-1,3 glucan metabolic process","type":"exact"},{"name":"ascospore wall beta-1,3 glucan metabolism","type":"exact"}],"termid":"GO:0034409","terms_by_termid":{"GO:0034413":null,"GO:0140748":null}}


id: PBO:0004804
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Stress Responsive Orphan","termid":"PBO:0004804"}


id: PBO:0064997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRDM4 antisense RNA 1","termid":"PBO:0064997"}


id: PBO:0053874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1150","termid":"PBO:0053874"}


id: GO:0036429
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosylcobinamide + ATP = adenosylcobinamide phosphate + ADP + H+.","definition_xrefs":["RHEA:15769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosylcobinamide kinase activity","termid":"GO:0043752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"adenosylcobinamide kinase (ATP-specific) activity","secondary_identifiers":["KEGG_REACTION:R05221","MetaCyc:COBINAMIDEKIN-RXN"],"termid":"GO:0036429"}


id: GO:0036089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of the cleavage furrow, a shallow groove in the cell surface near the old metaphase plate that marks the site of cytokinesis. This process includes the recruitment and localized activation of signals such as RhoA at the site of the future furrow to ensure that furrowing initiates at the correct site in the cell.","definition_xrefs":["PMID:20687468","GOC:ans","PMID:2192590","PMID:15811947"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinetic process","termid":"GO:0032506"},{"relation_name":"is_a","term_name":"plasma membrane invagination","termid":"GO:0099024"},{"relation_name":"part_of","term_name":"cytoskeleton-dependent cytokinesis","termid":"GO:0061640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"cleavage furrow formation","synonyms":[{"name":"cleavage furrow positioning","type":"narrow"}],"termid":"GO:0036089"}


id: GO:0010938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of tubulin heterodimers from one or both ends of a cytoplasmic microtubule.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule depolymerization","termid":"GO:0007019"},{"relation_name":"is_a","term_name":"cytoplasmic microtubule organization","termid":"GO:0031122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"cytoplasmic microtubule depolymerization","termid":"GO:0010938"}


id: GO:1903251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a multi-ciliated epithelial cell.","definition_xrefs":["PMID:24934224","GO_REF:0000086","GOC:sp","GOC:TermGenie","PMID:22231168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multi-ciliated epithelial cell differentiation","synonyms":[{"name":"multiciliate cell differentiation","type":"broad"}],"termid":"GO:1903251"}


id: PBO:0070215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 147 pseudogene","termid":"PBO:0070215"}


id: PBO:0072858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha and TIR motif containing 1","termid":"PBO:0072858"}


id: GO:0043579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an elaioplast, a leucoplast in which oil is stored.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leucoplast organization","termid":"GO:0009659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"elaioplast organization","synonyms":[{"name":"elaioplast organisation","type":"exact"},{"name":"elaioplast organization and biogenesis","type":"related"}],"termid":"GO:0043579"}


id: PBO:0002104
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DRE Element Binding","termid":"PBO:0002104"}


id: PBO:0076393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional adaptor 1","termid":"PBO:0076393"}


id: PBO:0053949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1254","termid":"PBO:0053949"}


id: PBO:0074121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 30 member 6","termid":"PBO:0074121"}


id: SO:1001266
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1001266 stop_codon_redefinition_as_selenocysteine (obsolete SO:1001266)","termid":"SO:1001266"}


id: GO:0008450
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of O-sialoglycoproteins; cleaves the -Arg31-Asp32- bond in glycophorin A. Does not cleave unglycosylated proteins, desialylated glycoproteins or glycoproteins that are only N-glycosylated.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete O-sialoglycoprotein endopeptidase activity (obsolete GO:0008450)","synonyms":[{"name":"O-sialoglycoprotein endopeptidase activity","type":"exact"},{"name":"glycophorin A proteinase activity","type":"related"},{"name":"glycoprotease activity","type":"related"},{"name":"glycoproteinase activity","type":"related"},{"name":"sialoglycoprotease activity","type":"related"},{"name":"sialoglycoproteinase activity","type":"related"}],"termid":"GO:0008450"}


id: GO:0022619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a generative cell. The generative cell gives rise to the sperm cells in the male gametophyte.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"microgametogenesis","termid":"GO:0055046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"generative cell differentiation","termid":"GO:0022619"}


id: PBO:0113430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ser-tRNA(Ala) hydrolase; hydrolyzes Ser-mischarged cytoplasmic and mitochondrial tRNAs; regulates translational fidelity based on Ala- and Thr-to-Ser misincorporation in the null mutant; trans-editing factor for alanyl- and threonyl-tRNA synthetases and seryl-tRNA synthetase (SerRS) via hydrolysis; null mutant displays decreased translation rate and increased readthrough of premature stop codons; (GFP)-fusion protein localizes to the cytoplasm; homologous to human trans-editing factor AARSD","termid":"PBO:0113430"}


id: PBO:0080172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 7","termid":"PBO:0080172"}


id: PBO:0015260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLRC ubiquitin E3 ligase complex specificiy factor Raf1/Dos1","termid":"PBO:0015260"}


id: MOD:01916
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to O4'-(N-acetylamino)galactosyl-L-tyrosine.","definition_xrefs":["PubMed:21983924","RESID:AA0577","PubMed:21712440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylaminogalactosylated residue","termid":"MOD:00563"},{"relation_name":"is_a","term_name":"O-glycosyl-L-tyrosine","termid":"MOD:01927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"O4'-(N-acetylamino)galactosyl-L-tyrosine","synonyms":[{"name":"(2S)-2-amino-3-(D-2-acetamido-2-deoxygalactopyranosyloxy)phenylpropanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (GalNAc) tyrosine","type":"exact"},{"name":"O4'-(N-acetylamino)galactosyl-L-tyrosine","type":"exact"},{"name":"O4'-(N-acetylgalactosaminyl)tyrosine","type":"exact"},{"name":"O4'-glycosyl-L-tyrosine","type":"exact"},{"name":"mucin type O-glycosyltyrosine","type":"exact"}],"termid":"MOD:01916"}


id: PBO:0039482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A5, pseudogene","termid":"PBO:0039482"}


id: GO:0160131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled self-propelled movement of a sperm cell from the uterus through the uterotubal junction (UTJ) into the oviduct, where interaction between the sperm and the UTJ acts as a major selective barrier for sperm, allowing only living, motile, uncapacitated, morphologically normal sperm with intact acrosomes to pass from the uterus into the oviduct.","definition_xrefs":["GOC:krc","PMID:29353867","PMID:31131960","PMID:34057175","PMID:32712384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sperm migration through the uterotubal junction","synonyms":[{"name":"sperm migration from the uterus to the oviduct","type":"exact"},{"name":"sperm migration through the UTJ","type":"related"}],"termid":"GO:0160131"}


id: PBO:0063373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphate cytidylyltransferase 1A, choline","termid":"PBO:0063373"}


id: PBO:0042969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 6","termid":"PBO:0042969"}


id: GO:0061323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a cell population that contributes to the shaping of the heart.","definition_xrefs":["GOC:mtg_heart","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation involved in heart morphogenesis","termid":"GO:0061323"}


id: GO:0071918
data:
  {"annotated_genes":["SJAG_02125"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103131],"is_not":false,"summary":null,"term":"GO:0071918"}]},"cv_name":"biological_process","definition":"The process in which urea, the water-soluble compound H2N-CO-NH2, is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urea transport","termid":"GO:0015840"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02125":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"urea transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"urea membrane transport","type":"exact"}],"termid":"GO:0071918","terms_by_termid":{"GO:0071918":null}}


id: PBO:0029217
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_heat","termid":"PBO:0029217"}


id: GO:0001927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of various polypeptides into the exocyst complex.","definition_xrefs":["PMID:9700152","GOC:hjd","Wikipedia:Exocyst"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"},{"relation_name":"part_of","term_name":"vesicle docking involved in exocytosis","termid":"GO:0006904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0140056"}],"interesting_parent_ids":["GO:0140056","GO:0044085","GO:0008150","GO:0016192","GO:0006810","GO:0065003"],"is_obsolete":false,"name":"exocyst assembly","termid":"GO:0001927"}


id: PBO:0088630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane DUF2015 family conserved fungal protein","termid":"PBO:0088630"}


id: PBO:0081354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 177","termid":"PBO:0081354"}


id: PBO:0041850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 1","termid":"PBO:0041850"}


id: PBO:0043786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase D pseudogene 1","termid":"PBO:0043786"}


id: GO:0080134
data:
  {"annotated_genes":["SJAG_02244","SJAG_04522","SJAG_03345","SJAG_00823","SJAG_01632","SJAG_01205","SJAG_03048","SJAG_03568","SJAG_04457","SJAG_02104","SJAG_01787","SJAG_02392","SJAG_04666","SJAG_00573","SJAG_03417","SJAG_00642","SJAG_00369","SJAG_01114","SJAG_00610","SJAG_04825","SJAG_05000","SJAG_01150","SJAG_01253","SJAG_03263","SJAG_04039","SJAG_00293","SJAG_00424","SJAG_01585","SJAG_03160","SJAG_03695","SJAG_02682"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99869,91911,95500,114376,103095,103665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"},{"annotations":[98427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001033"},{"annotations":[95926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904293"},{"annotations":[107821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904332"},{"annotations":[87290,107773,101939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000639"},{"annotations":[85504,86828,98908,88465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903139"},{"annotations":[112468,85327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900039"},{"annotations":[108096,113347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045739"},{"annotations":[103459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001034"},{"annotations":[109499,109500,89740,89741,89739,109501,113060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000640"},{"annotations":[98450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904547"},{"annotations":[106238,89941,71333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006282"},{"annotations":[102623,86968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000779"},{"annotations":[105368],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010569"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a response to stress. Response to stress is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).","definition_xrefs":["GOC:dhl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00293":null,"SJAG_00369":null,"SJAG_00424":null,"SJAG_00573":null,"SJAG_00610":null,"SJAG_00642":null,"SJAG_00823":null,"SJAG_01114":null,"SJAG_01150":null,"SJAG_01205":null,"SJAG_01253":null,"SJAG_01585":null,"SJAG_01632":null,"SJAG_01787":null,"SJAG_02104":null,"SJAG_02244":null,"SJAG_02392":null,"SJAG_02682":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03263":null,"SJAG_03345":null,"SJAG_03417":null,"SJAG_03568":null,"SJAG_03695":null,"SJAG_04039":null,"SJAG_04457":null,"SJAG_04522":null,"SJAG_04666":null,"SJAG_04825":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to stress","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0080134","terms_by_termid":{"GO:0006282":null,"GO:0010569":null,"GO:0045739":null,"GO:1900039":null,"GO:1903138":null,"GO:1903139":null,"GO:1904293":null,"GO:1904332":null,"GO:1904547":null,"GO:2000639":null,"GO:2000640":null,"GO:2000779":null,"GO:2001033":null,"GO:2001034":null}}


id: PBO:0028794
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_Argonaute-associated_RNA_length","termid":"PBO:0028794"}


id: GO:0019302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of D-ribose, (ribo-pentose).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-ribose metabolic process","termid":"GO:0006014"},{"relation_name":"is_a","term_name":"pentose biosynthetic process","termid":"GO:0019322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"D-ribose biosynthetic process","synonyms":[{"name":"D-ribose anabolism","type":"exact"},{"name":"D-ribose biosynthesis","type":"exact"},{"name":"D-ribose formation","type":"exact"},{"name":"D-ribose synthesis","type":"exact"}],"termid":"GO:0019302"}


id: GO:0140383
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxytryptamine + ATP = 4-hydoxytryptamine 4-phosphate + ADP + H+.","definition_xrefs":["PMID:28763571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-hydroxytryptamine kinase activity","secondary_identifiers":["RHEA:55564","EC:2.7.1.222"],"termid":"GO:0140383"}


id: GO:0032899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of a neurotrophin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"neurotrophin production","termid":"GO:0032898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neurotrophin production","termid":"GO:0032899"}


id: GO:2000710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of maintenance of meiotic sister chromatid cohesion in the centromeric region.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of maintenance of meiotic sister chromatid cohesion","termid":"GO:0034095"},{"relation_name":"is_a","term_name":"regulation of maintenance of meiotic sister chromatid cohesion, centromeric","termid":"GO:2000709"},{"relation_name":"negatively_regulates","term_name":"maintenance of meiotic sister chromatid cohesion, centromeric","termid":"GO:0035875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of maintenance of meiotic sister chromatid cohesion, centromeric","synonyms":[{"name":"negative regulation of maintenance of centromeric meiotic sister chromatin cohesion","type":"exact"},{"name":"negative regulation of maintenance of meiotic sister chromatin cohesion at centromere","type":"exact"},{"name":"negative regulation of maintenance of sister chromatin cohesion at centromere at meiosis I","type":"exact"}],"termid":"GO:2000710"}


id: PBO:0054432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1828","termid":"PBO:0054432"}


id: SO:0001629
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that changes the first two or last two bases of an intron, or the 5th base from the start of the intron in the orientation of the transcript.","direct_ancestors":[{"relation_name":"is_a","term_name":"splicing_variant","termid":"SO:0001568"},{"relation_name":"is_a","term_name":"intron_variant","termid":"SO:0001627"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_site_variant","secondary_identifiers":["http://vat.gersteinlab.org/formats.php"],"synonyms":[{"name":"VAT:spliceOverlap","type":"exact"},{"name":"essential_splice_site","type":"exact"},{"name":"splice site variant","type":"exact"}],"termid":"SO:0001629"}


id: PBO:0070681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 52","termid":"PBO:0070681"}


id: GO:1900370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of post-transcriptional gene silencing by RNA.","definition_xrefs":["GOC:TermGenie","PMID:22412382","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of post-transcriptional gene silencing","termid":"GO:0060148"},{"relation_name":"is_a","term_name":"regulation of post-transcriptional gene silencing by regulatory ncRNA","termid":"GO:1900368"},{"relation_name":"positively_regulates","term_name":"regulatory ncRNA-mediated post-transcriptional gene silencing","termid":"GO:0035194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of post-transcriptional gene silencing by RNA","synonyms":[{"name":"up regulation of RNAi","type":"exact"},{"name":"activation of RNA interference","type":"narrow"},{"name":"activation of RNAi","type":"exact"},{"name":"positive regulation of PTGS","type":"exact"},{"name":"positive regulation of RNA interference","type":"exact"},{"name":"positive regulation of RNAi","type":"exact"},{"name":"up regulation of RNA interference","type":"exact"},{"name":"up-regulation of RNA interference","type":"exact"},{"name":"up-regulation of RNAi","type":"exact"},{"name":"upregulation of RNA interference","type":"exact"},{"name":"upregulation of RNAi","type":"exact"}],"termid":"GO:1900370"}


id: PBO:0029754
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_metabolic_process","termid":"PBO:0029754"}


id: PBO:0079572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin B pseudogene 4","termid":"PBO:0079572"}


id: GO:0015334
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of oligopeptide from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide transmembrane transporter activity","termid":"GO:0035673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"high-affinity oligopeptide transmembrane transporter activity","synonyms":[{"name":"high affinity oligopeptide transporter activity","type":"exact"},{"name":"high-affinity oligopeptide transporter activity","type":"related"}],"termid":"GO:0015334"}


id: PBO:0080213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"villin 1","termid":"PBO:0080213"}


id: PBO:0090727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SBDS family ribosome assembly protein Sdo1","termid":"PBO:0090727"}


id: PBO:0002466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin","termid":"PBO:0002466"}


id: PBO:0082918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytochrome c1 heme lyase; involved in maturation of cytochrome c1, which is a subunit of the mitochondrial ubiquinol-cytochrome-c reductase; links heme covalently to apocytochrome c1; human homolog HCCS can complement yeast cyt2 null mutant","termid":"PBO:0082918"}


id: PBO:0000409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier","termid":"PBO:0000409"}


id: GO:0045837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of membrane potential","synonyms":[{"name":"down regulation of membrane potential","type":"exact"},{"name":"down-regulation of membrane potential","type":"exact"},{"name":"downregulation of membrane potential","type":"exact"},{"name":"inhibition of membrane potential","type":"narrow"},{"name":"reduction of membrane potential","type":"exact"}],"termid":"GO:0045837"}


id: GO:0071342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the process in which a contractile ring is assembled in a specific location that contributes to cytokinesis during cell cycle.","definition_xrefs":["GOC:mah","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of establishment of actomyosin contractile ring localization (obsolete GO:0071342)","termid":"GO:0071342"}


id: PBO:0047125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 168 member B","termid":"PBO:0047125"}


id: GO:0010688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the synthesis of RNA from ribosomal protein genes mediated by RNA polymerase II.","definition_xrefs":["GOC:dph","GOC:tb","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transcription by RNA polymerase II","termid":"GO:0000122"},{"relation_name":"is_a","term_name":"regulation of ribosomal protein gene transcription by RNA polymerase II","termid":"GO:0060962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006355","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ribosomal protein gene transcription by RNA polymerase II","synonyms":[{"name":"negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0010688"}


id: PBO:0047429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCF1 rRNA-processing protein","termid":"PBO:0047429"}


id: GO:0036482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a neuron in response to hydrogen peroxide.","definition_xrefs":["GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron intrinsic apoptotic signaling pathway in response to oxidative stress","termid":"GO:0036480"},{"relation_name":"is_a","term_name":"intrinsic apoptotic signaling pathway in response to hydrogen peroxide","termid":"GO:0036481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"neuron intrinsic apoptotic signaling pathway in response to hydrogen peroxide","synonyms":[{"name":"H2O2-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"hydrogen peroxide-induced neuron apoptosis","type":"broad"},{"name":"hydrogen peroxide-induced neuronal apoptosis","type":"broad"},{"name":"neuron apoptosis in response to hydrogen peroxide","type":"related"},{"name":"neuron intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"}],"termid":"GO:0036482"}


id: PBO:0030348
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete,_unequal_mitotic_sister_chromatid_segregation","termid":"PBO:0030348"}


id: PBO:0089224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, Atf-CREB family Atf21","termid":"PBO:0089224"}


id: GO:0140326
data:
  {"annotated_genes":["SJAG_02957","SJAG_03774","SJAG_01731","SJAG_00587","SJAG_01095","SJAG_01945","SJAG_00589","SJAG_02114","SJAG_03050","SJAG_02897","SJAG_02581","SJAG_02943","SJAG_02132","SJAG_02516","SJAG_00018","SJAG_05209","SJAG_00669"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86591,86592,86593,86594,86595,86596,86597,86598,86599,98401,101127],"is_not":false,"summary":null,"term":"GO:0140326"},{"annotations":[108617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034202"},{"annotations":[90486,93993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140351"},{"annotations":[95535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180013"},{"annotations":[90488,93995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140345"},{"annotations":[90489,93996,96256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090554"},{"annotations":[95537,108558,96257,90490,93997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090555"},{"annotations":[95538,108560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140346"},{"annotations":[108561,95539,93998,90491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090556"}]},"cv_name":"molecular_function","definition":"Catalysis of the movement of lipids from one membrane leaflet to the other, driven by ATP hydrolysis. This includes flippases and floppases.","definition_xrefs":["PMID:16828084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramembrane lipid transporter activity","termid":"GO:0140303"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00018":null,"SJAG_00587":null,"SJAG_00589":null,"SJAG_00669":null,"SJAG_01095":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_02114":null,"SJAG_02132":null,"SJAG_02516":null,"SJAG_02581":null,"SJAG_02897":null,"SJAG_02943":null,"SJAG_02957":null,"SJAG_03050":null,"SJAG_03774":null,"SJAG_05209":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0140303","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ATPase-coupled intramembrane lipid transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0008557","GO:0004012","Reactome:R-HSA-939763","EC:7.6.2.1","Reactome:R-HSA-947591","MetaCyc:3.6.3.1-RXN"],"synonyms":[{"name":"ATPase-coupled phospholipid transporter activity","type":"related"},{"name":"ATPase-dependent phospholipid transporter activity","type":"related"},{"name":"aminophospholipid-transporting ATPase","type":"related"},{"name":"phospholipid flippase activity","type":"narrow"},{"name":"phospholipid translocating ATPase activity","type":"related"},{"name":"phospholipid-translocating ATPase activity","type":"related"},{"name":"phospholipid-transporting ATPase activity","type":"related"}],"termid":"GO:0140326","terms_by_termid":{"GO:0034202":null,"GO:0090554":null,"GO:0090555":null,"GO:0090556":null,"GO:0140326":null,"GO:0140345":null,"GO:0140346":null,"GO:0140351":null,"GO:0180013":null}}


id: PBO:0079700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubinuclein 1","termid":"PBO:0079700"}


id: FYPO:0001414
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sulfide (S2-). Cells stop growing (and may die) at a concentration of sulfide ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002683","FYPO:0000139","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to sulfide","synonyms":[{"name":"hypersensitive to sulfide","type":"exact"},{"name":"sensitive to sulfide during mitotic cell cycle","type":"related"},{"name":"sensitive to sulfide during vegetative growth","type":"exact"},{"name":"sensitive to sulfide ions","type":"exact"},{"name":"sensitive to sulphide","type":"exact"}],"termid":"FYPO:0001414"}


id: PBO:0088506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger, RING-type, Rad16-like","termid":"PBO:0088506"}


id: GO:0001864
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a pentraxin, a member of a family of inflammatory proteins with a radially symmetric arrangement of five identical, noncovalently linked chains in a pentagonal array.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opsonin binding","termid":"GO:0001846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"pentraxin binding","termid":"GO:0001864"}


id: PBO:0089344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex ATPase subunit Caf16","termid":"PBO:0089344"}


id: PBO:0081630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF559-ZNF177 readthrough","termid":"PBO:0081630"}


id: PBO:0053974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1285","termid":"PBO:0053974"}


id: PBO:0003673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Nsa1 (predicted)","termid":"PBO:0003673"}


id: GO:0001543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Disruption of theca cell layer releasing follicular fluid and/or the oocyte.","direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"part_of","term_name":"ovulation from ovarian follicle","termid":"GO:0001542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ovarian follicle rupture","termid":"GO:0001543"}


id: PBO:0045945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EFR3 homolog B","termid":"PBO:0045945"}


id: PBO:0108776
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"named from budding yeast ortholog","termid":"PBO:0108776"}


id: PBO:0083206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene YJL065C/DLS1","termid":"PBO:0083206"}


id: PBO:0001868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit Mrp10 (predicted)","termid":"PBO:0001868"}


id: GO:0004712
data:
  {"annotated_genes":["SJAG_00993","SJAG_03592","SJAG_01181","SJAG_02342","SJAG_04486","SJAG_03067"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87785,95063,104634],"is_not":false,"summary":null,"term":"GO:0004712"},{"annotations":[88236,106399,107040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004708"}]},"cv_name":"molecular_function","definition":"Catalysis of the reactions: ATP + a protein serine = ADP + protein serine phosphate; ATP + a protein threonine = ADP + protein threonine phosphate; and ATP + a protein tyrosine = ADP + protein tyrosine phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_01181":null,"SJAG_02342":null,"SJAG_03067":null,"SJAG_03592":null,"SJAG_04486":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016301","GO:0004672","GO:0140096"],"is_obsolete":false,"name":"protein serine/threonine/tyrosine kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6802927","Reactome:R-HSA-6802918","Reactome:R-HSA-6802910","Reactome:R-HSA-6802916","Reactome:R-HSA-6802924","Reactome:R-HSA-6802941","Reactome:R-HSA-6802921","Reactome:R-HSA-9656212","EC:2.7.12.1","Reactome:R-HSA-5672969","Reactome:R-HSA-6802922","Reactome:R-HSA-5674373"],"synonyms":[{"name":"dual-specificity kinase activity","type":"exact"},{"name":"dual-specificity protein kinase","type":"exact"},{"name":"protein threonine/tyrosine kinase activity","type":"narrow"}],"termid":"GO:0004712","terms_by_termid":{"GO:0004708":null,"GO:0004712":null}}


id: PBO:0030113
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-formation_of_abnormal_tRNA_processing_intermediates","termid":"PBO:0030113"}


id: PBO:0060290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain 6B","termid":"PBO:0060290"}


id: GO:0036401
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a pyrokinin and transmitting the signal within the cell to induce a change in cell activity. Pyrokinins are a group of insect neuropeptides that share the common C-terminal pentapeptide sequence Phe-X-Pro-Arg-Leu-NH2 (X = S, T, K, A, or G). They play a central role in diverse physiological processes including stimulation of gut motility, production and release of sex pheromones, diapause, and pupariation.","definition_xrefs":["PMID:12951076","PMID:19186060","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"pyrokinin receptor activity","synonyms":[{"name":"PK receptor activity","type":"exact"}],"termid":"GO:0036401"}


id: PBO:0069249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 504, pseudogene","termid":"PBO:0069249"}


id: GO:0080120
data:
  {"annotated_genes":["SJAG_03396","SJAG_00730"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85631,93404],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071586"}]},"cv_name":"biological_process","definition":"A series of specific posttranslational modifications to the CAAX box region of CAAX box proteins. CAAX box proteins are eukaryotic proteins that contain a CAAX motif where the C is a cysteine, the two A residues are aliphatic amino acids and the X can be one of several amino acids. The CAAX-box proteins undergo three sequential, enzymatic, post-translational modifications essential to their targeting: First, the proteins are prenylated by one of two prenyltransferases called farnesyltransferase and geranylgeranyltransferase-I. Prenylation results in the covalent attachment of either farnesyl or geranylgeranyl isoprenoid groups to the cysteine in the CAAX box motif. Prenylation is followed by proteolytic removal of the last three amino acids of the protein (AAX). Finally, the newly exposed carboxylate group of the isoprenylcysteine is methylated by an ER-associated prenyl-dependent carboxylmethyltransferase.","definition_xrefs":["PMID:18641086","PMID:12039957","PMID:17114793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00730":null,"SJAG_03396":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"CAAX-box protein maturation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CAAX-box protein processing","type":"related"},{"name":"farnesylated protein maturation","type":"related"}],"termid":"GO:0080120","terms_by_termid":{"GO:0071586":null}}


id: GO:1900065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ethanol catabolic process.","definition_xrefs":["PMID:10608811","GOC:TermGenie","PMID:7760841"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular alcohol catabolic process","termid":"GO:1900419"},{"relation_name":"regulates","term_name":"ethanol catabolic process","termid":"GO:0006068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of ethanol catabolic process","synonyms":[{"name":"regulation of ethanol breakdown","type":"exact"},{"name":"regulation of ethanol catabolism","type":"exact"},{"name":"regulation of ethanol degradation","type":"exact"}],"termid":"GO:1900065"}


id: PBO:0000603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar sorting protein Vps45","termid":"PBO:0000603"}


id: PBO:0082755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the septin ring that is required for cytokinesis; present at the ends of rod-like septin hetero-oligomers; C-terminal extension is important for recruitment of Bni5p to the mother-bud neck, which in turn is required for Myo1p recruitment and cytokinesis; septin rings at the mother-bud neck act as scaffolds for recruiting cell division factors and as barriers to prevent diffusion of specific proteins between mother and daughter cells","termid":"PBO:0082755"}


id: FYPO_EXT:0000002
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extensions","definition":"intermediate fraction of cells (penetrance) or moderate phenotype (severity)","definition_xrefs":["PomBase:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FYPO severity extension","termid":"FYPO_EXT:1000001"},{"relation_name":"is_a","term_name":"FYPO penetrance extension","termid":"FYPO_EXT:1000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medium","termid":"FYPO_EXT:0000002"}


id: PBO:0076882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 33","termid":"PBO:0076882"}


id: PBO:0067829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 131","termid":"PBO:0067829"}


id: PBO:0068556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 7, pseudogene","termid":"PBO:0068556"}


id: PBO:0049739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin subunit beta pseudogene 1","termid":"PBO:0049739"}


id: GO:0031785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1A melatonin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melatonin receptor binding","termid":"GO:0031784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"type 1A melatonin receptor binding","synonyms":[{"name":"type 1A melatonin receptor ligand","type":"narrow"}],"termid":"GO:0031785"}


id: PBO:0071355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 14","termid":"PBO:0071355"}


id: GO:0033487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pelargonidin 3-O-glucoside, a basic anthocyanin responsible for red to magenta coloration of flowers and fruits.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid biosynthetic process","termid":"GO:0009813"},{"relation_name":"is_a","term_name":"beta-glucoside biosynthetic process","termid":"GO:1901806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pelargonidin 3-O-glucoside biosynthetic process","synonyms":[{"name":"pelargonidin 3-O-glucoside anabolism","type":"exact"},{"name":"pelargonidin 3-O-glucoside biosynthesis","type":"exact"},{"name":"pelargonidin 3-O-glucoside formation","type":"exact"},{"name":"pelargonidin 3-O-glucoside synthesis","type":"exact"}],"termid":"GO:0033487"}


id: MOD:01865
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Applied Biosystems mTRAQ light reporter+balance group.","definition_xrefs":["OMSSA:208","Unimod:888#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mTRAQ light reporter+balance reagent acylated residue","termid":"MOD:01864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"mTRAQ light reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems mTRAQ(TM) reagent","type":"related"},{"name":"mTRAQ light","type":"related"},{"name":"mTRAQ light on nterm","type":"exact"}],"termid":"MOD:01865"}


id: SO:1000050
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"No effect on the state of the RNA.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000050 sequence_variant_causing_no_change_in_transcript (obsolete SO:1000050)","synonyms":[{"name":"mutation causing no change in transcript","type":"related"},{"name":"sequence variant causing no change in transcript","type":"exact"}],"termid":"SO:1000050"}


id: PBO:0067404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 513, pseudogene","termid":"PBO:0067404"}


id: MOD:00363
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-selenocysteine residues to form L-cysteinyl-L-selenocystine.","definition_xrefs":["PubMed:12911312","RESID:AA0358#SEC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cysteinyl-L-selenocysteine","termid":"MOD:01627"},{"relation_name":"is_a","term_name":"crosslinked L-selenocysteine residue","termid":"MOD:02061"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteinyl-L-selenocysteine (Cys-Sec)","synonyms":[{"name":"(R,R)-2-amino-3-[3-(2-aminopropanoic acid)sulfanyl]selanylpropanoic acid","type":"exact"},{"name":"CROSSLNK Cysteinyl-selenocysteine (Cys-Sec)","type":"exact"},{"name":"CROSSLNK Cysteinyl-selenocysteine (Sec-Cys)","type":"exact"},{"name":"L-cysteinyl-L-selenocysteine","type":"exact"}],"termid":"MOD:00363"}


id: PBO:0072187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 3","termid":"PBO:0072187"}


id: PR:P14575
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome c oxidase subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11403:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPMIT.04","secondary_identifiers":["UniProtKB:P14575"],"synonyms":[{"name":"SPMIT.04","type":"related"},{"name":"Spom972h-MT-CO3","type":"exact"},{"name":"cytochrome c oxidase polypeptide III (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P14575"}


id: GO:0046965
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a nuclear retinoid X receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear retinoic acid receptor binding","termid":"GO:0042974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"nuclear retinoid X receptor binding","synonyms":[{"name":"RXR binding","type":"exact"},{"name":"retinoid X receptor binding","type":"broad"}],"termid":"GO:0046965"}


id: GO:0048614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring during the post-embryonic phase, by which the anatomical structures of the ectodermal gut are generated and organized.","definition_xrefs":["GOC:jid","GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"ectodermal digestive tract morphogenesis","termid":"GO:0048567"},{"relation_name":"part_of","term_name":"post-embryonic ectodermal digestive tract development","termid":"GO:0048612"},{"relation_name":"part_of","term_name":"post-embryonic digestive tract morphogenesis","termid":"GO:0048621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic ectodermal digestive tract morphogenesis","synonyms":[{"name":"post-embryonic ectodermal gut morphogenesis","type":"related"}],"termid":"GO:0048614"}


id: PBO:0041094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRWD1 antisense RNA 2","termid":"PBO:0041094"}


id: PBO:0069710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 990, pseudogene","termid":"PBO:0069710"}


id: FYPO:0005199
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which negative regulation of a protein kinase activity occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:14739927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of catalytic activity","termid":"FYPO:0004916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased negative regulation of protein kinase activity","synonyms":[{"name":"decreased inhibition of protein kinase activity","type":"narrow"},{"name":"decreased negative regulation of protein kinase activity during mitotic cell cycle","type":"related"},{"name":"decreased negative regulation of protein kinase activity during vegetative growth","type":"exact"},{"name":"reduced negative regulation of protein kinase activity","type":"exact"}],"termid":"FYPO:0005199"}


id: FYPO:0004952
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the prospore membrane begins to form and enclose the nucleus, but the leading edge does not close completely, leaving a gap in the membrane.","definition_xrefs":["PomBase:mah","PMID:17951524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal prospore membrane formation","termid":"FYPO:0001914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000121"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000121","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"incomplete prospore membrane closure","synonyms":[{"name":"incomplete enclosure of nucleus by forespore membrane","type":"related"},{"name":"incomplete engulfment of nucleus by forespore membrane","type":"related"},{"name":"incomplete forespore membrane closure","type":"exact"}],"termid":"FYPO:0004952"}


id: PBO:0080400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS33A core subunit of CORVET and HOPS complexes","termid":"PBO:0080400"}


id: GO:1903883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of interleukin-17-mediated signaling pathway.","definition_xrefs":["GOC:TermGenie","GOC:krc","PMID:20054338","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of interleukin-17-mediated signaling pathway","termid":"GO:1903881"},{"relation_name":"positively_regulates","term_name":"interleukin-17-mediated signaling pathway","termid":"GO:0097400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-17-mediated signaling pathway","synonyms":[{"name":"activation of IL-17-mediated signaling pathway","type":"narrow"},{"name":"activation of IL-17-mediated signalling pathway","type":"narrow"},{"name":"activation of interleukin-17-mediated signaling pathway","type":"narrow"},{"name":"activation of interleukin-17-mediated signalling pathway","type":"narrow"},{"name":"positive regulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"positive regulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"positive regulation of interleukin-17-mediated signalling pathway","type":"exact"},{"name":"up regulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"up regulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"up regulation of interleukin-17-mediated signaling pathway","type":"exact"},{"name":"up regulation of interleukin-17-mediated signalling pathway","type":"exact"},{"name":"up-regulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"up-regulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"up-regulation of interleukin-17-mediated signaling pathway","type":"exact"},{"name":"up-regulation of interleukin-17-mediated signalling pathway","type":"exact"},{"name":"upregulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"upregulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"upregulation of interleukin-17-mediated signaling pathway","type":"exact"},{"name":"upregulation of interleukin-17-mediated signalling pathway","type":"exact"}],"termid":"GO:1903883"}


id: GO:0060360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of leucine import as a result of an ammonium ion stimulus. Leucine import is the directed movement of leucine into a cell or organelle.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of L-leucine import across plasma membrane","termid":"GO:1905533"},{"relation_name":"part_of","term_name":"cellular response to ammonium ion","termid":"GO:0071242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of leucine import in response to ammonium ion","synonyms":[{"name":"negative regulation of leucine uptake in response to ammonium ion","type":"exact"}],"termid":"GO:0060360"}


id: PBO:0000370
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally represses str3","termid":"PBO:0000370"}


id: PBO:0084513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of conserved endoplasmic reticulum membrane complex; involved in efficient folding of proteins in the ER; null mutant displays induction of the unfolded protein response; interacts with Gal80p; homologous to worm H17B01.4/EMC-1, fly CG2943, and human KIAA0090","termid":"PBO:0084513"}


id: PBO:0061853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactomedin 3","termid":"PBO:0061853"}


id: PBO:0060023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 11","termid":"PBO:0060023"}


id: PBO:0069498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 765, pseudogene","termid":"PBO:0069498"}


id: FYPO:0001400
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount, distribution, and morphology of cytoplasmic microtubules is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cytoplasmic microtubules during vegetative growth","termid":"FYPO:0001976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal interphase microtubules","synonyms":[{"name":"normal cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"normal interphase cytoplasmic microtubules","type":"exact"},{"name":"normal interphase microtubules during mitotic cell cycle","type":"related"},{"name":"normal interphase microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0001400"}


id: PBO:0085872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; HVG1 has a paralog, VRG4, that arose from the whole genome duplication","termid":"PBO:0085872"}


id: PBO:0077841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein D52","termid":"PBO:0077841"}


id: GO:0060726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate or frequency of coreceptor activity involved in epidermal growth factor receptor signaling pathway.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of coreceptor activity involved in epidermal growth factor receptor signaling pathway (obsolete GO:0060726)","synonyms":[{"name":"regulation of Neu/ErbB-2 receptor activity","type":"narrow"},{"name":"regulation of coreceptor activity involved in epidermal growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0060726"}


id: PBO:0074838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 32A","termid":"PBO:0074838"}


id: GO:0051398
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of a lysine residue from the N-terminal of an oligopeptide or polypeptide chain.","definition_xrefs":["GOC:ai","PMID:12799365"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal lysine aminopeptidase activity (obsolete GO:0051398)","synonyms":[{"name":"N-terminal lysine aminopeptidase activity","type":"exact"},{"name":"lysine aminopeptidase activity","type":"broad"},{"name":"lysyl aminopeptidase activity","type":"broad"}],"termid":"GO:0051398"}


id: PBO:0080505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAPL divergent transcript","termid":"PBO:0080505"}


id: GO:0003244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenic growth in which the right ventricle grows along a radial axis.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth involved in heart morphogenesis","termid":"GO:0003241"},{"relation_name":"part_of","term_name":"cardiac right ventricle morphogenesis","termid":"GO:0003215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"radial growth involved in right ventricle morphogenesis","termid":"GO:0003244"}


id: SO:0000042
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute of a pseudogene (SO:0000336).","definition_xrefs":["SO:ma"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000042 pseudogene_attribute (obsolete SO:0000042)","synonyms":[{"name":"pseudogene attribute","type":"exact"}],"termid":"SO:0000042"}


id: PBO:0002506
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.8.4.11","termid":"PBO:0002506"}


id: FYPO:0006689
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which insertion or deletion mutations occur at a higher frequency than normal.","definition_xrefs":["PomBase:mah","PMID:14599746"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mutator","termid":"FYPO:0000256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased insertion/deletion frequency","synonyms":[{"name":"increased indel frequency","type":"related"},{"name":"increased insertion or deletion frequency","type":"exact"}],"termid":"FYPO:0006689"}


id: FYPO:0005715
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which activation of an inactive protein kinase activity begins later than normal during mitosis.","definition_xrefs":["PMID:8978687","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of catalytic activity","termid":"FYPO:0004916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"delayed activation of protein kinase activity during mitosis","synonyms":[{"name":"delayed activation of protein kinase activity during M phase of mitotic cell cycle","type":"related"},{"name":"delayed activation of protein kinase activity during mitosis during vegetative growth","type":"exact"},{"name":"delayed activation of protein kinase activity during mitotic M phase","type":"related"},{"name":"delayed activation of protein kinase activity during mitotic M-phase","type":"related"},{"name":"delayed onset of activation of protein kinase activity during mitosis","type":"exact"}],"termid":"FYPO:0005715"}


id: GO:0046569
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glyoxal + O2 + H2O = glyoxalate + H2O2.","definition_xrefs":["PMID:11733005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor","termid":"GO:0016623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glyoxal oxidase activity","synonyms":[{"name":"GLOX","type":"exact"}],"termid":"GO:0046569"}


id: PBO:0030815
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_aconitate_hydratase_activity","termid":"PBO:0030815"}


id: GO:1902130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (+)-lariciresinol.","definition_xrefs":["PMID:9872995","GOC:TermGenie","PMID:8910615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan metabolic process","termid":"GO:0009806"},{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"(+)-lariciresinol metabolic process","synonyms":[{"name":"(+)-lariciresinol metabolism","type":"exact"}],"termid":"GO:1902130"}


id: PBO:0089117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-associated lipid droplet biogenesis protein, seipin Sei1","termid":"PBO:0089117"}


id: GO:2001046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of integrin-mediated signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of integrin-mediated signaling pathway","termid":"GO:2001044"},{"relation_name":"positively_regulates","term_name":"integrin-mediated signaling pathway","termid":"GO:0007229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of integrin-mediated signaling pathway","synonyms":[{"name":"positive regulation of integrin-mediated signalling pathway","type":"exact"}],"termid":"GO:2001046"}


id: PBO:0040674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B cell receptor associated protein 31 pseudogene 2","termid":"PBO:0040674"}


id: FYPO:0007562
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is decreased relative to normal in a medium containing serine as the nitrogen source.","definition_xrefs":["PomBase:mah","PMID:32313168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0005447","FYPO:0002060","FYPO:0001985","FYPO:0000003","FYPO:0002057","FYPO:0000139"],"is_obsolete":false,"name":"decreased cell population growth on serine nitrogen source","synonyms":[{"name":"decreased growth on serine nitrogen source","type":"broad"},{"name":"decreased vegetative cell growth on serine nitrogen source","type":"exact"},{"name":"growth defect, slow growth with serine nitrogen source","type":"narrow"},{"name":"reduced cell population growth on serine nitrogen source","type":"exact"},{"name":"slow cell growth on serine nitrogen source","type":"narrow"}],"termid":"FYPO:0007562"}


id: PBO:0016984
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rer2 can form a catalytically active complex with S. cerevisiae Nus1p","termid":"PBO:0016984"}


id: PBO:0053755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 996","termid":"PBO:0053755"}


id: GO:0060783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of activation of the transmembrane Smoothened-type protein in the mesenchymal cells of the prostate that contribute to the progression of the prostate over time. This process contributes to lung development.","definition_xrefs":["PMID:12221011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smoothened signaling pathway","termid":"GO:0007224"},{"relation_name":"part_of","term_name":"epithelial-mesenchymal signaling involved in prostate gland development","termid":"GO:0060738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"mesenchymal smoothened signaling pathway involved in prostate gland development","synonyms":[{"name":"mesenchymal hedgehog signaling pathway involved in prostate gland development","type":"exact"},{"name":"mesenchymal hh signaling pathway involved in prostate gland development","type":"exact"},{"name":"mesenchymal smoothened signalling pathway involved in prostate gland development","type":"exact"}],"termid":"GO:0060783"}


id: PBO:0026805
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_meiotic_DNA_double-strand_break_formation","termid":"PBO:0026805"}


id: MOD:00549
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["Unimod:196","PubMed:15283597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium tagged reagent","termid":"MOD:01431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APTA d3","synonyms":[{"name":"(3-acrylamidopropyl)trimethylammonium","type":"related"},{"name":"APTA d3","type":"related"},{"name":"QAT:2H(3)","type":"related"}],"termid":"MOD:00549"}


id: PBO:0070445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 2","termid":"PBO:0070445"}


id: PBO:0047675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXP3 regulating long intergenic non-coding RNA","termid":"PBO:0047675"}


id: PR:Q9C469
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- grt1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C469"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein grt1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB8B6.04c","synonyms":[{"name":"Spom972h-grt1","type":"exact"}],"termid":"PR:Q9C469"}


id: GO:0045019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"regulation of nitric oxide biosynthetic process","termid":"GO:0045428"},{"relation_name":"is_a","term_name":"negative regulation of nitric oxide metabolic process","termid":"GO:1904406"},{"relation_name":"negatively_regulates","term_name":"nitric oxide biosynthetic process","termid":"GO:0006809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nitric oxide biosynthetic process","synonyms":[{"name":"down regulation of nitric oxide biosynthetic process","type":"exact"},{"name":"down-regulation of nitric oxide biosynthetic process","type":"exact"},{"name":"downregulation of nitric oxide biosynthetic process","type":"exact"},{"name":"inhibition of nitric oxide biosynthetic process","type":"narrow"},{"name":"negative regulation of nitric oxide anabolism","type":"exact"},{"name":"negative regulation of nitric oxide biosynthesis","type":"exact"},{"name":"negative regulation of nitric oxide formation","type":"exact"},{"name":"negative regulation of nitric oxide synthesis","type":"exact"}],"termid":"GO:0045019"}


id: GO:0089713
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heteromeric complex consisting of Cbf1 and basic leucine zipper (bZIP) containing transcriptional activators, Met4 and Met28, that forms over the sequence TCACGTG in the upstream activating sequence (UAS) of genes involved in sulfur amino acid metabolism, resulting in their transcriptional activation.","definition_xrefs":["PMID:9171357","PMID:8665859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator complex","termid":"GO:0005667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Cbf1-Met4-Met28 complex","termid":"GO:0089713"}


id: GO:0090137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of an epithelial cell to another epithelial cell via adhesion molecules that contributes to epithelium migration.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell-cell adhesion","termid":"GO:0090136"},{"relation_name":"part_of","term_name":"epithelium migration","termid":"GO:0090132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"epithelial cell-cell adhesion involved in epithelium migration","termid":"GO:0090137"}


id: GO:0072187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a metanephric cap from unspecified parts. The metanephric cap is formed by the condensation of metanephric mesenchymal cells surrounding the ureteric bud tip.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"metanephric cap morphogenesis","termid":"GO:0072186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric cap formation","termid":"GO:0072187"}


id: FYPO:0004078
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing cyclosporin A.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000003","FYPO:0002057","FYPO:0002058","FYPO:0000139","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on cyclosporin A","synonyms":[{"name":"normal cell population growth in presence of cyclosporin A","type":"exact"},{"name":"normal cell population growth on cyclosporin A","type":"exact"},{"name":"normal cellular response to cyclosporin A","type":"related"},{"name":"normal vegetative cell population growth on cyclosporin A","type":"exact"}],"termid":"FYPO:0004078"}


id: PBO:0013090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1014 family protein, HMG-box clan member","termid":"PBO:0013090"}


id: SO:0001457
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region defined by a set of transcribed sequences from the same gene or expressed pseudogene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"reagent","termid":"SO:0000695"},{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcribed_cluster","synonyms":[{"name":"transcribed cluster","type":"exact"},{"name":"unigene cluster","type":"related"}],"termid":"SO:0001457"}


id: GO:0072126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of glomerular mesangial cell proliferation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glomerular mesangial cell proliferation","termid":"GO:0072124"},{"relation_name":"is_a","term_name":"positive regulation of cell proliferation involved in kidney development","termid":"GO:1901724"},{"relation_name":"positively_regulates","term_name":"glomerular mesangial cell proliferation","termid":"GO:0072110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glomerular mesangial cell proliferation","termid":"GO:0072126"}


id: GO:0102208
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + a 3-(all-trans-polyrenyl)benzene-1,2-diol = S-adenosyl-L-homocysteine + H+ + a 2-methoxy-6-(all-trans-polyprenyl)phenol.","definition_xrefs":["GOC:pz","EC:2.1.1.222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"2-polyprenyl-6-hydroxyphenol methylase activity","secondary_identifiers":["MetaCyc:RXN-12160","RHEA:31411"],"termid":"GO:0102208"}


id: GO:1900287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellotriose transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of cellotriose transport","termid":"GO:1900285"},{"relation_name":"positively_regulates","term_name":"cellotriose transport","termid":"GO:2001096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of cellotriose transport","synonyms":[{"name":"activation of cellotriose transport","type":"narrow"},{"name":"up regulation of cellotriose transport","type":"exact"},{"name":"up-regulation of cellotriose transport","type":"exact"},{"name":"upregulation of cellotriose transport","type":"exact"}],"termid":"GO:1900287"}


id: PBO:0078774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 2-6","termid":"PBO:0078774"}


id: PBO:0000629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferrichrome synthetase Sib1","termid":"PBO:0000629"}


id: PBO:0077704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"troponin I1, slow skeletal type","termid":"PBO:0077704"}


id: FYPO:0007388
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the mitotic spindle is assembled in an incorrect orientation. Normally, the spindle is parallel to the long axis of the cell.","definition_xrefs":["PMID:18495844","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002399","FYPO:0001985","FYPO:0000002","FYPO:0000120","FYPO:0001320","FYPO:0000054"],"is_obsolete":false,"name":"misoriented mitotic spindle","synonyms":[{"name":"abnormal angle of mitotic spindle orientation","type":"related"},{"name":"abnormal mitotic spindle orientation","type":"exact"},{"name":"misoriented mitotic spindle during mitotic cell cycle","type":"related"},{"name":"misoriented mitotic spindle during vegetative growth","type":"exact"}],"termid":"FYPO:0007388"}


id: GO:0006118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transport of electrons from an electron donor to an electron acceptor.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete electron transport (obsolete GO:0006118)","synonyms":[{"name":"6-phosphofructokinase reduction","type":"related"},{"name":"dihydrobiopterin reduction","type":"related"},{"name":"dihydrolipoamide reduction","type":"related"},{"name":"dihydrolipoylprotein reduction","type":"related"},{"name":"dihydropteridine reduction","type":"related"},{"name":"electron transfer","type":"exact"},{"name":"electron transport","type":"exact"},{"name":"other pathways of electron transport","type":"related"},{"name":"oxidized glutathione reduction","type":"related"},{"name":"protein-disulfide reduction","type":"related"}],"termid":"GO:0006118"}


id: MOD:01678
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively coverts L-lysine to N6-carbamoyl-L-lysine.","definition_xrefs":["DeltaMass:56","PubMed:12203680","PubMed:10978403","OMSSA:31","Unimod:5#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbamoylated residue","termid":"MOD:00398"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-carbamoyl-L-lysine","synonyms":[{"name":"2-amino-6-ureido-hexanoic acid","type":"exact"},{"name":"Carbamyl","type":"related"},{"name":"Carbamylation","type":"related"},{"name":"N6-(aminocarbonyl)-L-lysine","type":"exact"},{"name":"N6CbmLys","type":"exact"},{"name":"carbamylk","type":"exact"},{"name":"homocitrulline","type":"exact"}],"termid":"MOD:01678"}


id: FYPO:0001132
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115553],"is_not":false,"summary":null,"term":"FYPO:0001132"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to heterochromatin during vegetative growth","termid":"FYPO:0001131"},{"relation_name":"is_a","term_name":"abolished protein localization to chromatin during vegetative growth","termid":"FYPO:0001508"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null,"SJAG_03892":null},"genotype_count":1,"genotypes_by_uniquename":{"nur1delta__vps4delta":{"display_name":"nur1delta vps4delta","display_uniquename":"nur1delta__vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01050","SJAG_03892"],"name":"abolished protein localization to heterochromatin during vegetative growth","references_by_uniquename":{"PMID:32109380":null},"synonyms":[{"name":"abolished protein localisation to heterochromatin during vegetative growth","type":"exact"},{"name":"abolished protein localization to heterochromatin during mitotic cell cycle","type":"related"},{"name":"protein localization to heterochromatin abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0001132","terms_by_termid":{"FYPO:0001132":null,"FYPO_EXT:0000001":null}}


id: PBO:0000093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase (predicted)","termid":"PBO:0000093"}


id: FYPO:0005574
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which nuclear transport is abnormal during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport phenotype during vegetative growth","termid":"FYPO:0001336"},{"relation_name":"is_a","term_name":"abnormal nuclear transport","termid":"FYPO:0005573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abnormal nuclear transport during meiosis","synonyms":[{"name":"abnormal nuclear transport during meiotic nuclear division","type":"related"}],"termid":"FYPO:0005574"}


id: GO:0033300
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of dehydroascorbate, 5-(1,2-dihydroxyethyl)furan-2,3,4(5H)-trione, from one side of a membrane to the other.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"vitamin transmembrane transporter activity","termid":"GO:0090482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"dehydroascorbic acid transmembrane transporter activity","secondary_identifiers":["RHEA:60380","Reactome:R-HSA-198818"],"synonyms":[{"name":"dehydroascorbate transporter activity","type":"exact"},{"name":"dehydroascorbic acid transporter activity","type":"related"}],"termid":"GO:0033300"}


id: FYPO:0007784
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to protein aggregate centers is decreased. Protein aggregate centers are composed of chaperones and misfolded proteins, and are reversibly formed in the nucleus and cytosol to shield thermosensitive proteins from degradation until conditions allow disaggregation and refolding.","definition_xrefs":["PomBase:mah","PMID:32075773","PMID:33946513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to protein aggregate center","synonyms":[{"name":"decreased protein localisation to protein aggregate centre","type":"exact"},{"name":"decreased protein localization to PAC","type":"exact"},{"name":"decreased protein localization to PACs","type":"exact"},{"name":"decreased protein localization to protein aggregate center during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to protein aggregate center during vegetative growth","type":"exact"},{"name":"reduced protein localization to protein aggregate center","type":"exact"}],"termid":"FYPO:0007784"}


id: PR:Q10292
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mek1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis-specific serine/threonine-protein kinase mek1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.03","synonyms":[{"name":"Spom972h-mek1","type":"exact"}],"termid":"PR:Q10292"}


id: PBO:0072082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 12","termid":"PBO:0072082"}


id: PR:O74465
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hrr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helicase required for RNAi-mediated heterochromatin assembly 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.03","synonyms":[{"name":"Spom972h-hrr1","type":"exact"}],"termid":"PR:O74465"}


id: GO:0044632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the rate of complement activation by the lectin pathway, in a different organism.","definition_xrefs":["GOC:jl","PMID:20837040"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of complement activation, lectin pathway in another organism (obsolete GO:0044632)","synonyms":[{"name":"negative regulation of complement activation, lectin pathway in other organism","type":"exact"}],"termid":"GO:0044632"}


id: PBO:0052663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 31","termid":"PBO:0052663"}


id: GO:0044378
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The activity of binding selectively and non-covalently to DNA in a sequence-independent manner and distorting the original structure of DNA, typically a straight helix, into a bend, or increasing the bend if the original structure was intrinsically bent due to its sequence.","definition_xrefs":["PMID:20123079","GOC:jl","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding, bending","termid":"GO:0008301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"non-sequence-specific DNA binding, bending","synonyms":[{"name":"DNA bending involving non-sequence-specific DNA binding","type":"exact"}],"termid":"GO:0044378"}


id: FYPO:0003484
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone does not occur. The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["PomBase:mah","GO:1902967","GO:1990023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to mitotic spindle","termid":"FYPO:0003186"},{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle midzone","termid":"FYPO:0004883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to mitotic spindle midzone","synonyms":[{"name":"abolished protein localization to mitotic spindle midzone during mitotic cell cycle","type":"related"},{"name":"protein absent from mitotic spindle midzone","type":"related"},{"name":"protein localisation to mitotic spindle midzone abolished","type":"exact"},{"name":"protein localization to mitotic spindle midzone abolished","type":"exact"},{"name":"protein localization to spindle midzone abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0003484"}


id: GO:0060450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of muscle contraction of the hindgut, the posterior part of the alimentary canal, including the rectum, and the large intestine.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hindgut contraction","termid":"GO:0043134"},{"relation_name":"is_a","term_name":"positive regulation of smooth muscle contraction","termid":"GO:0045987"},{"relation_name":"is_a","term_name":"positive regulation of digestive system process","termid":"GO:0060456"},{"relation_name":"positively_regulates","term_name":"hindgut contraction","termid":"GO:0043133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hindgut contraction","termid":"GO:0060450"}


id: PBO:0086088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein phosphatase; has specificity for serine, threonine, and tyrosine residues; has a role in the DNA synthesis phase of the cell cycle","termid":"PBO:0086088"}


id: GO:0071701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the directed movement of a MAP kinase from the nucleus to the cytoplasm.","definition_xrefs":["GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of MAPK export from nucleus (obsolete GO:0071701)","synonyms":[{"name":"regulation of MAPK export from cell nucleus","type":"exact"},{"name":"regulation of MAPK export out of nucleus","type":"exact"},{"name":"regulation of MAPK transport from nucleus to cytoplasm","type":"exact"},{"name":"regulation of MAPK-nucleus export","type":"exact"},{"name":"regulation of cytoplasmic translocation of MAP kinase","type":"exact"},{"name":"regulation of cytoplasmic translocation of mitogen-activated protein kinase","type":"exact"}],"termid":"GO:0071701"}


id: PBO:0052844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 3-4, pseudogene","termid":"PBO:0052844"}


id: PBO:0088538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, ornithine Ort1","termid":"PBO:0088538"}


id: PBO:0027955
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_pyridoxamine-phosphate_oxidase_activity","termid":"PBO:0027955"}


id: GO:0030227
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with apolipoprotein E to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete apolipoprotein E receptor activity (obsolete GO:0030227)","synonyms":[{"name":"ApoE receptor","type":"exact"},{"name":"apolipoprotein E receptor activity","type":"exact"}],"termid":"GO:0030227"}


id: GO:0032758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-9 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-9 production","termid":"GO:0032678"},{"relation_name":"positively_regulates","term_name":"interleukin-9 production","termid":"GO:0032638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-9 production","secondary_identifiers":["GO:0045419"],"synonyms":[{"name":"activation of interleukin-9 production","type":"narrow"},{"name":"positive regulation of IL-9 production","type":"exact"},{"name":"positive regulation of interleukin-9 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-9 production","type":"narrow"},{"name":"up regulation of interleukin-9 production","type":"exact"},{"name":"up-regulation of interleukin-9 production","type":"exact"},{"name":"upregulation of interleukin-9 production","type":"exact"}],"termid":"GO:0032758"}


id: GO:0140732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of production of amphiregulin.","definition_xrefs":["PMID:24463227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of amphiregulin production","termid":"GO:0140731"},{"relation_name":"positively_regulates","term_name":"amphiregulin production","termid":"GO:0140730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of amphiregulin production","synonyms":[{"name":"positive regulation of AREG production","type":"broad"}],"termid":"GO:0140732"}


id: PBO:0047712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin containing dimethylaniline monoxygenase 3","termid":"PBO:0047712"}


id: PBO:0080629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 76","termid":"PBO:0080629"}


id: GO:0022001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency or rate at which a cell adopts an anterior neural cell fate.","definition_xrefs":["GOC:jid","GOC:tb","GO_REF:0000021","GOC:dgh","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate commitment","termid":"GO:0010454"},{"relation_name":"is_a","term_name":"negative regulation of nervous system development","termid":"GO:0051961"},{"relation_name":"part_of","term_name":"neural plate anterior/posterior regionalization","termid":"GO:0021999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of anterior neural cell fate commitment of the neural plate","synonyms":[{"name":"caudalization of neural plate","type":"exact"},{"name":"down regulation of anterior neural cell fate of the neural plate","type":"exact"},{"name":"down-regulation of anterior neural cell fate of the neural plate","type":"exact"},{"name":"downregulation of anterior neural cell fate of the neural plate","type":"exact"},{"name":"inhibition of anterior neural cell fate of the neural plate","type":"narrow"},{"name":"negative regulation of anterior neural cell fate of the neural plate","type":"exact"},{"name":"posteriorization","type":"broad"}],"termid":"GO:0022001"}


id: GO:0032189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an actomyosin contractile ring is maintained in a location and prevented from moving elsewhere.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete maintenance of actomyosin contractile ring localization (obsolete GO:0032189)","synonyms":[{"name":"cytokinetic ring anchoring","type":"related"},{"name":"maintenance of contractile ring localisation involved in cell cycle cytokinesis","type":"exact"},{"name":"maintenance of contractile ring localization involved in cell cycle cytokinesis","type":"exact"},{"name":"maintenance of contractile ring localization involved in cytokinesis during cell cycle","type":"related"}],"termid":"GO:0032189"}


id: PR:Q6BDR8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nse4 gene.","definition_xrefs":["UniProtKB:Q6BDR8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-structural maintenance of chromosome element 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC20F10.04c","synonyms":[{"name":"DNA repair protein rad62 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-nse4","type":"exact"},{"name":"non-SMC element 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q6BDR8"}


id: PR:Q09809
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2G11.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium permeable stress-gated cation channel 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2G11.09","synonyms":[{"name":"SpCSC1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC2G11.09","type":"exact"}],"termid":"PR:Q09809"}


id: GO:0015955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which a pyrimidine deoxyribonucleotide is synthesized from another pyrimidine deoxyribonucleotide.","definition_xrefs":["ISBN:0471394831","ISBN:0306444747","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide metabolic process","termid":"GO:0009219"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide interconversion","termid":"GO:0015953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleotide interconversion","termid":"GO:0015955"}


id: GO:0099556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse, via the release and reception of carbon monoxide molecules, that modulates the synaptic transmission properties of the synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling by carbon monoxide","termid":"GO:0099549"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by soluble gas, modulating synaptic transmission","termid":"GO:0099554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"trans-synaptic signaling by carbon monoxide, modulating synaptic transmission","termid":"GO:0099556"}


id: GO:1903899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the PERK-mediated unfolded protein response.","definition_xrefs":["GOC:bf","GO_REF:0000058","GOC:PARL","GOC:TermGenie","PMID:22013210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endoplasmic reticulum unfolded protein response","termid":"GO:1900103"},{"relation_name":"is_a","term_name":"regulation of PERK-mediated unfolded protein response","termid":"GO:1903897"},{"relation_name":"positively_regulates","term_name":"PERK-mediated unfolded protein response","termid":"GO:0036499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of PERK-mediated unfolded protein response","synonyms":[{"name":"activation of PERK branch of UPR","type":"narrow"},{"name":"activation of PERK signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"activation of PERK-mediated unfolded protein response","type":"narrow"},{"name":"activation of PKR-like ER kinase signal transduction","type":"narrow"},{"name":"activation of UPR signaling by PERK stress sensor","type":"narrow"},{"name":"activation of endoplasmic reticulum unfolded protein response; PERK signaling","type":"narrow"},{"name":"positive regulation of EIF2AK3-mediated unfolded protein response","type":"related"},{"name":"positive regulation of PERK branch of UPR","type":"exact"},{"name":"positive regulation of PERK signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"positive regulation of PKR-like ER kinase signal transduction","type":"exact"},{"name":"positive regulation of UPR signaling by PERK stress sensor","type":"exact"},{"name":"positive regulation of endoplasmic reticulum unfolded protein response; PERK signaling","type":"exact"},{"name":"up regulation of PERK branch of UPR","type":"exact"},{"name":"up regulation of PERK signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"up regulation of PERK-mediated unfolded protein response","type":"exact"},{"name":"up regulation of PKR-like ER kinase signal transduction","type":"exact"},{"name":"up regulation of UPR signaling by PERK stress sensor","type":"exact"},{"name":"up regulation of endoplasmic reticulum unfolded protein response; PERK signaling","type":"exact"},{"name":"up-regulation of PERK branch of UPR","type":"exact"},{"name":"up-regulation of PERK signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"up-regulation of PERK-mediated unfolded protein response","type":"exact"},{"name":"up-regulation of PKR-like ER kinase signal transduction","type":"exact"},{"name":"up-regulation of UPR signaling by PERK stress sensor","type":"exact"},{"name":"up-regulation of endoplasmic reticulum unfolded protein response; PERK signaling","type":"exact"},{"name":"upregulation of PERK branch of UPR","type":"exact"},{"name":"upregulation of PERK signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"upregulation of PERK-mediated unfolded protein response","type":"exact"},{"name":"upregulation of PKR-like ER kinase signal transduction","type":"exact"},{"name":"upregulation of UPR signaling by PERK stress sensor","type":"exact"},{"name":"upregulation of endoplasmic reticulum unfolded protein response; PERK signaling","type":"exact"}],"termid":"GO:1903899"}


id: PBO:0085985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; required for efficient 5' processing of mitochondrial tRNAs, for respiratory growth and mitochondrial genome maintenance; null mutation results in a decrease in plasma membrane electron transport; localizes to the matrix side of the inner mitochondrial membrane","termid":"PBO:0085985"}


id: FYPO:0009006
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell enters the meiotic cell cycle without either of the normal steps that precede it: conjugation with cellular fusion and karyogamy with nuclear fusion.","definition_xrefs":["PomBase:mlr","PMID:36650056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle","termid":"FYPO:0000052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abnormal meiotic cell cycle entry","termid":"FYPO:0009006"}


id: GO:0001316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) occurring during the process of replicative cell aging as a result of reactive oxygen species, where the change varies according to the age of the cell or organism.","definition_xrefs":["GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete age-dependent response to reactive oxygen species involved in replicative cell aging (obsolete GO:0001316)","synonyms":[{"name":"age-dependent response to AOS during replicative cell aging","type":"exact"},{"name":"age-dependent response to ROI during replicative cell aging","type":"related"},{"name":"age-dependent response to ROS during replicative cell aging","type":"related"},{"name":"age-dependent response to active oxygen species during replicative cell aging","type":"related"},{"name":"age-dependent response to reactive oxidative species during replicative cell aging","type":"exact"},{"name":"age-dependent response to reactive oxygen intermediate during replicative cell aging","type":"related"},{"name":"age-dependent response to reactive oxygen species during replicative cell ageing","type":"exact"},{"name":"age-dependent response to reactive oxygen species during replicative cell aging","type":"related"}],"termid":"GO:0001316"}


id: GO:0072207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an epithelium in the metanephros over time, from its formation to the mature structure. An epithelium is a tissue that covers the internal or external surfaces of an anatomical structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney epithelium development","termid":"GO:0072073"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric epithelium development","termid":"GO:0072207"}


id: PBO:0049892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERC2 pseudogene 11","termid":"PBO:0049892"}


id: GO:0097446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, and/or maintained in, a specific location in a eisosome filament (also called linear eisosome), a filamentous cortical structure formed, in S. pombe, by the eisosome component Pil1.","definition_xrefs":["PMID:22869600","GOC:mah","GOC:vw","PMID:23722945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cytoskeleton","termid":"GO:0044380"},{"relation_name":"is_a","term_name":"protein localization to cell cortex","termid":"GO:0072697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to eisosome filament","synonyms":[{"name":"protein localization to linear eisosome","type":"exact"}],"termid":"GO:0097446"}


id: PBO:0042894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement factor D","termid":"PBO:0042894"}


id: PBO:0027951
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_pyridoxal_level","termid":"PBO:0027951"}


id: GO:0097717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of copper (Cu) ions passing through the blood-cerebrospinal fluid barrier.","definition_xrefs":["GOC:sl","PMID:24614235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion transport","termid":"GO:0006825"},{"relation_name":"is_a","term_name":"transport across blood-cerebrospinal fluid barrier","termid":"GO:0150195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"copper ion transport across blood-cerebrospinal fluid barrier","synonyms":[{"name":"copper ion transport across BCB","type":"related"},{"name":"copper ion transport across BCSFB","type":"exact"},{"name":"copper ion transport across blood-CSF barrier","type":"exact"},{"name":"copper ion transport across blood/CSF barrier","type":"exact"},{"name":"copper ion transport across blood/cerebrospinal fluid barrier","type":"exact"}],"termid":"GO:0097717"}


id: PBO:0069721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1001, pseudogene","termid":"PBO:0069721"}


id: PBO:0030713
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_heat_shock_during_vegetative_growth","termid":"PBO:0030713"}


id: GO:0090145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the mitochondrial nucleoid that contributes to mitochondrial division.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial nucleoid organization involved in mitochondrial fission (obsolete GO:0090145)","synonyms":[{"name":"mitochondrial nucleoid organisation involved in mitochondrial fission","type":"exact"}],"termid":"GO:0090145"}


id: PBO:0056092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYL1 basic helix-loop-helix family member","termid":"PBO:0056092"}


id: PBO:0003579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mdm10/Mdm12/Mmm1 complex subunit Mmm1 (predicted)","termid":"PBO:0003579"}


id: PBO:0071440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 46","termid":"PBO:0071440"}


id: PBO:0038360
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transports","termid":"PBO:0038360"}


id: PBO:0055127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2546","termid":"PBO:0055127"}


id: PBO:0050827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HYI antisense RNA 1","termid":"PBO:0050827"}


id: MOD:00401
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct of a cysteine residue with the Gygi isotope-coded affinity tag d0 reagent.","definition_xrefs":["PubMed:10504701","Unimod:8#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"},{"relation_name":"is_a","term_name":"isotope tagged sufhydryl reagent modified cysteine","termid":"MOD:01820"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gygi ICAT(TM) d0 modified cysteine","synonyms":[{"name":"Gygi ICAT(TM) d0","type":"related"},{"name":"ICAT-G","type":"related"}],"termid":"MOD:00401"}


id: GO:0052659
data:
  {"annotated_genes":["SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104351],"is_not":false,"summary":null,"term":"GO:0052659"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,3,4,5-tetrakisphosphate + H2O = 1D-myo-inositol 1,3,4-trisphosphate + phosphate.","definition_xrefs":["RHEA:11392","EC:3.1.3.56"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate phosphatase activity","termid":"GO:0052743"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1855218","MetaCyc:RXN-8730","KEGG_REACTION:R03430","Reactome:R-HSA-1855213"],"synonyms":[{"name":"5PTase activity","type":"related"},{"name":"D-myo-inositol (1,3,4,5)-polyphosphate 5-phosphatase activity","type":"related"},{"name":"Ins(1,3,4,5)P(4) 5-phosphatase activity","type":"related"},{"name":"Ins(1,3,4,5)P4 5-phosphatase activity","type":"related"},{"name":"inositol polyphosphate-5-phosphatase activity","type":"broad"},{"name":"type I inositol-polyphosphate phosphatase activity","type":"related"},{"name":"type II inositol polyphosphate 5-phosphatase activity","type":"related"}],"termid":"GO:0052659","terms_by_termid":{"GO:0052659":null}}


id: PBO:0083191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the uncharacterized ORF YML133C","termid":"PBO:0083191"}


id: GO:0044631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of complement activation by the lectin pathway, in a different organism.","definition_xrefs":["GOC:jl","PMID:20837040"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of complement activation, lectin pathway in another organism (obsolete GO:0044631)","synonyms":[{"name":"positive regulation of complement activation, lectin pathway in other organism","type":"exact"}],"termid":"GO:0044631"}


id: PBO:0076487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TARDBP pseudogene 2","termid":"PBO:0076487"}


id: GO:0034864
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4,4-trimethylpentanal + H2O = 2,4,4-trimethylpentanoate + 3 H+ + 2 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4,4-trimethylpentanal dehydrogenase activity (obsolete GO:0034864)","termid":"GO:0034864"}


id: GO:1904774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ubiquinone biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:8125303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ubiquinone biosynthetic process","termid":"GO:0010795"},{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"ubiquinone biosynthetic process","termid":"GO:0006744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006744"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006744"}],"interesting_parent_ids":["GO:0008150","GO:0006744","GO:0044281"],"is_obsolete":false,"name":"negative regulation of ubiquinone biosynthetic process","synonyms":[{"name":"down regulation of coenzyme Q biosynthesis","type":"exact"},{"name":"down regulation of coenzyme Q biosynthetic process","type":"exact"},{"name":"down regulation of coenzyme Q10 biosynthesis","type":"narrow"},{"name":"down regulation of coenzyme Q10 biosynthetic process","type":"narrow"},{"name":"down regulation of coenzyme Q6 biosynthesis","type":"narrow"},{"name":"down regulation of coenzyme Q6 biosynthetic process","type":"narrow"},{"name":"down regulation of coenzyme Q8 biosynthesis","type":"narrow"},{"name":"down regulation of coenzyme Q8 biosynthetic process","type":"narrow"},{"name":"down regulation of coenzyme Q9 biosynthesis","type":"narrow"},{"name":"down regulation of coenzyme Q9 biosynthetic process","type":"narrow"},{"name":"down regulation of ubiquinone anabolism","type":"exact"},{"name":"down regulation of ubiquinone biosynthesis","type":"exact"},{"name":"down regulation of ubiquinone biosynthetic process","type":"exact"},{"name":"down regulation of ubiquinone formation","type":"exact"},{"name":"down regulation of ubiquinone synthesis","type":"exact"},{"name":"down-regulation of coenzyme Q biosynthesis","type":"exact"},{"name":"down-regulation of coenzyme Q biosynthetic process","type":"exact"},{"name":"down-regulation of coenzyme Q10 biosynthesis","type":"narrow"},{"name":"down-regulation of coenzyme Q10 biosynthetic process","type":"narrow"},{"name":"down-regulation of coenzyme Q6 biosynthesis","type":"narrow"},{"name":"down-regulation of coenzyme Q6 biosynthetic process","type":"narrow"},{"name":"down-regulation of coenzyme Q8 biosynthesis","type":"narrow"},{"name":"down-regulation of coenzyme Q8 biosynthetic process","type":"narrow"},{"name":"down-regulation of coenzyme Q9 biosynthesis","type":"narrow"},{"name":"down-regulation of coenzyme Q9 biosynthetic process","type":"narrow"},{"name":"down-regulation of ubiquinone anabolism","type":"exact"},{"name":"down-regulation of ubiquinone biosynthesis","type":"exact"},{"name":"down-regulation of ubiquinone biosynthetic process","type":"exact"},{"name":"down-regulation of ubiquinone formation","type":"exact"},{"name":"down-regulation of ubiquinone synthesis","type":"exact"},{"name":"downregulation of coenzyme Q biosynthesis","type":"exact"},{"name":"downregulation of coenzyme Q biosynthetic process","type":"exact"},{"name":"downregulation of coenzyme Q10 biosynthesis","type":"narrow"},{"name":"downregulation of coenzyme Q10 biosynthetic process","type":"narrow"},{"name":"downregulation of coenzyme Q6 biosynthesis","type":"narrow"},{"name":"downregulation of coenzyme Q6 biosynthetic process","type":"narrow"},{"name":"downregulation of coenzyme Q8 biosynthesis","type":"narrow"},{"name":"downregulation of coenzyme Q8 biosynthetic process","type":"narrow"},{"name":"downregulation of coenzyme Q9 biosynthesis","type":"narrow"},{"name":"downregulation of coenzyme Q9 biosynthetic process","type":"narrow"},{"name":"downregulation of ubiquinone anabolism","type":"exact"},{"name":"downregulation of ubiquinone biosynthesis","type":"exact"},{"name":"downregulation of ubiquinone biosynthetic process","type":"exact"},{"name":"downregulation of ubiquinone formation","type":"exact"},{"name":"downregulation of ubiquinone synthesis","type":"exact"},{"name":"inhibition of coenzyme Q biosynthesis","type":"narrow"},{"name":"inhibition of coenzyme Q biosynthetic process","type":"narrow"},{"name":"inhibition of coenzyme Q10 biosynthesis","type":"narrow"},{"name":"inhibition of coenzyme Q10 biosynthetic process","type":"narrow"},{"name":"inhibition of coenzyme Q6 biosynthesis","type":"narrow"},{"name":"inhibition of coenzyme Q6 biosynthetic process","type":"narrow"},{"name":"inhibition of coenzyme Q8 biosynthesis","type":"narrow"},{"name":"inhibition of coenzyme Q8 biosynthetic process","type":"narrow"},{"name":"inhibition of coenzyme Q9 biosynthesis","type":"narrow"},{"name":"inhibition of coenzyme Q9 biosynthetic process","type":"narrow"},{"name":"inhibition of ubiquinone anabolism","type":"narrow"},{"name":"inhibition of ubiquinone biosynthesis","type":"narrow"},{"name":"inhibition of ubiquinone biosynthetic process","type":"narrow"},{"name":"inhibition of ubiquinone formation","type":"narrow"},{"name":"inhibition of ubiquinone synthesis","type":"narrow"},{"name":"negative regulation of coenzyme Q biosynthesis","type":"exact"},{"name":"negative regulation of coenzyme Q biosynthetic process","type":"exact"},{"name":"negative regulation of coenzyme Q10 biosynthesis","type":"narrow"},{"name":"negative regulation of coenzyme Q10 biosynthetic process","type":"narrow"},{"name":"negative regulation of coenzyme Q6 biosynthesis","type":"narrow"},{"name":"negative regulation of coenzyme Q6 biosynthetic process","type":"narrow"},{"name":"negative regulation of coenzyme Q8 biosynthesis","type":"narrow"},{"name":"negative regulation of coenzyme Q8 biosynthetic process","type":"narrow"},{"name":"negative regulation of coenzyme Q9 biosynthesis","type":"narrow"},{"name":"negative regulation of coenzyme Q9 biosynthetic process","type":"narrow"},{"name":"negative regulation of ubiquinone anabolism","type":"exact"},{"name":"negative regulation of ubiquinone biosynthesis","type":"exact"},{"name":"negative regulation of ubiquinone formation","type":"exact"},{"name":"negative regulation of ubiquinone synthesis","type":"exact"}],"termid":"GO:1904774"}


id: GO:0033385
data:
  {"annotated_genes":["SJAG_00580"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033386"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving geranylgeranyl diphosphate, a polyprenol compound involved in the biosynthesis of a variety of terpenoids including chlorophylls, carotenoids, tocopherols, plastoquinones, and the plant hormones gibberellins.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00580":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"geranylgeranyl diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"geranylgeranyl diphosphate metabolism","type":"exact"},{"name":"geranylgeranyldiphosphate metabolic process","type":"exact"}],"termid":"GO:0033385","terms_by_termid":{"GO:0033386":null}}


id: RO:0002104
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between a cell c and a protein complex or protein p if and only if that cell has as part a plasma_membrane[GO:0005886], and that plasma membrane has p as part.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part","termid":"BFO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_plasma_membrane_part","termid":"RO:0002104"}


id: GO:0045964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving dopamine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dopamine metabolic process","termid":"GO:0042053"},{"relation_name":"is_a","term_name":"positive regulation of catecholamine metabolic process","termid":"GO:0045915"},{"relation_name":"positively_regulates","term_name":"dopamine metabolic process","termid":"GO:0042417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dopamine metabolic process","synonyms":[{"name":"activation of dopamine metabolic process","type":"narrow"},{"name":"positive regulation of dopamine metabolism","type":"exact"},{"name":"stimulation of dopamine metabolic process","type":"narrow"},{"name":"up regulation of dopamine metabolic process","type":"exact"},{"name":"up-regulation of dopamine metabolic process","type":"exact"},{"name":"upregulation of dopamine metabolic process","type":"exact"}],"termid":"GO:0045964"}


id: FYPO:0003752
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the total amount of polyadenylated messenger RNA (mRNA) measured in the nucleus is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased nuclear polyadenylated mRNA level during vegetative growth","termid":"FYPO:0003119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002403"}],"interesting_parent_ids":["FYPO:0002403","FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased total nuclear polyadenylated mRNA level during vegetative growth","synonyms":[{"name":"increased level of bulk nuclear polyadenylated mRNA during vegetative growth","type":"exact"},{"name":"increased level of total nuclear polyadenylated mRNA during vegetative growth","type":"exact"},{"name":"increased nuclear bulk poly(A)+ mRNA level during vegetative growth","type":"exact"},{"name":"increased total nuclear polyadenylated mRNA accumulation during vegetative growth","type":"related"},{"name":"increased total nuclear polyadenylated mRNA level during mitotic cell cycle","type":"related"},{"name":"increased total nuclear polyadenylated mRNA transcript level during vegetative growth","type":"exact"},{"name":"increased total nuclear polyadenylated messenger RNA level during vegetative growth","type":"exact"},{"name":"total nuclear poly(A)+ mRNA accumulation","type":"related"},{"name":"total nuclear poly-A mRNA accumulation","type":"related"}],"termid":"FYPO:0003752"}


id: GO:0031685
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an adenosine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"adenosine receptor binding","synonyms":[{"name":"adenosine receptor ligand","type":"narrow"}],"termid":"GO:0031685"}


id: PBO:0042293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD3 gamma subunit of T-cell receptor complex","termid":"PBO:0042293"}


id: PBO:0091645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase","termid":"PBO:0091645"}


id: GO:0050078
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + malonate = acetate + malonyl-CoA.","definition_xrefs":["EC:2.8.3.3","RHEA:18817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016782","GO:0016740"],"is_obsolete":false,"name":"malonate CoA-transferase activity","secondary_identifiers":["MetaCyc:MALONATE-COA-TRANSFERASE-RXN","KEGG_REACTION:R00743"],"synonyms":[{"name":"acetyl-CoA:malonate CoA-transferase activity","type":"related"},{"name":"malonate coenzyme A-transferase activity","type":"related"}],"termid":"GO:0050078"}


id: GO:0000752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation or adhesion of compatible mating types via complementary cell-cell interactions during conjugation with cellular fusion of a unicellular organism. An example of this process is agglutination in Saccharomyces cerevisiae.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in intraspecies interaction between organisms","termid":"GO:0051703"},{"relation_name":"is_a","term_name":"cell-cell adhesion in response to extracellular stimulus","termid":"GO:0140039"},{"relation_name":"part_of","term_name":"conjugation with cellular fusion","termid":"GO:0000747"},{"relation_name":"part_of","term_name":"response to pheromone triggering conjugation with cellular fusion","termid":"GO:0000749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150","GO:0000747"],"is_obsolete":false,"name":"agglutination involved in conjugation with cellular fusion","secondary_identifiers":["GO:0007334"],"synonyms":[{"name":"agglutination","type":"broad"},{"name":"cell-cell adhesion during conjugation with cellular fusion","type":"exact"},{"name":"cell-cell adhesion during mating","type":"exact"}],"termid":"GO:0000752"}


id: PBO:0078868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPM2 antisense RNA","termid":"PBO:0078868"}


id: PBO:0054415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1811","termid":"PBO:0054415"}


id: GO:1905102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of apoptosome assembly.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GO_REF:0000058","PMID:26265044","GOC:bc","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of apoptosome assembly","termid":"GO:1905100"},{"relation_name":"positively_regulates","term_name":"apoptosome assembly","termid":"GO:0097314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"positive regulation of apoptosome assembly","synonyms":[{"name":"activation of apoptosome assembly","type":"narrow"},{"name":"activation of apoptosome formation","type":"narrow"},{"name":"positive regulation of apoptosome formation","type":"exact"},{"name":"up regulation of apoptosome assembly","type":"exact"},{"name":"up regulation of apoptosome formation","type":"exact"},{"name":"up-regulation of apoptosome assembly","type":"exact"},{"name":"up-regulation of apoptosome formation","type":"exact"},{"name":"upregulation of apoptosome assembly","type":"exact"},{"name":"upregulation of apoptosome formation","type":"exact"}],"termid":"GO:1905102"}


id: MOD:01559
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems iTRAQ8plex-117 reporter+balance group.","definition_xrefs":["Unimod:730#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"iTRAQ8plex-117 reporter+balance reagent acylated residue","termid":"MOD:01556"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-117 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01559"}


id: GO:0032898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of a neurotrophin due to biosynthesis or secretion by cells in a neuron's target field, resulting in an increase in its intracellular or extracellular levels. A neurotrophin is any of a family of growth factors that prevent apoptosis in neurons and promote nerve growth.","definition_xrefs":["GOC:ecd","GOC:mtg_MIT_16mar07","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neurotrophin production","termid":"GO:0032898"}


id: GO:0070686
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a macropinocytic cup.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"part_of","term_name":"macropinocytic cup","termid":"GO:0070685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"macropinocytic cup membrane","synonyms":[{"name":"crown membrane","type":"exact"}],"termid":"GO:0070686"}


id: PBO:0086298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in the ubiquitin-proteasome pathway; interacts with ubiquitinated protein, Cdc48p and the proteasomal regulatory particle; may protect cells from trivalent metalloid induced proteotoxicity; contains a PACE promoter element and is co-regulated with proteasome subunit genes; AN1-type zinc finger protein, with DHHC and ubiquitin-like domains (UBL); ortholog of ZFAND1, a human gene linked to cancer; protein abundance increases under DNA replication stress","termid":"PBO:0086298"}


id: GO:0008910
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + kanamycin = ADP + 2 H+ + kanamycin 3'-phosphate.","definition_xrefs":["RHEA:24256","EC:2.7.1.95"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside phosphotransferase activity","termid":"GO:0034071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"kanamycin kinase activity","secondary_identifiers":["KEGG_REACTION:R01888","MetaCyc:KANAMYCIN-KINASE-RXN"],"synonyms":[{"name":"APH(3') activity","type":"broad"},{"name":"ATP:kanamycin 3'-O-phosphotransferase activity","type":"related"},{"name":"aminoglycoside 3'-phosphotransferase activity","type":"broad"},{"name":"kanamycin kinase (phosphorylating)","type":"related"},{"name":"neomycin phosphotransferase activity","type":"related"},{"name":"neomycin-kanamycin phosphotransferase activity","type":"related"}],"termid":"GO:0008910"}


id: GO:0004442
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: D-myo-inositol 1,3-bisphosphate + H2O = D-myo-inositol 1-monophosphate + phosphate.","definition_xrefs":["GOC:go_curators","EC:3.1.3.65"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol-1,4,-bisphosphate 3-phosphatase (obsolete GO:0004442)","synonyms":[{"name":"inositol-1,4,-bisphosphate 3-phosphatase","type":"exact"}],"termid":"GO:0004442"}


id: FYPO:0003253
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of one or more amino acids into the cell is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abolished amino acid import during vegetative growth","synonyms":[{"name":"abolished amino acid import across plasma membrane during vegetative growth","type":"exact"},{"name":"abolished amino acid import during mitotic cell cycle","type":"related"},{"name":"abolished amino acid import into cell","type":"exact"},{"name":"abolished amino acid uptake","type":"exact"},{"name":"amino acid import abolished","type":"exact"}],"termid":"FYPO:0003253"}


id: PBO:0085738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in transcription initiation; acts at TATA-containing promoters; associates with the basal transcription factor TFIID; contains two bromodomains; corresponds to the C-terminal region of mammalian TAF1; redundant with Bdf1p; protein abundance increases in response to DNA replication stress; BDF2 has a paralog, BDF1, that arose from the whole genome duplication","termid":"PBO:0085738"}


id: GO:0043759
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 2-methylbutanoate + CoA = AMP + diphosphate + 2-methylbutanoyl-CoA.","definition_xrefs":["RHEA:46180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acid-CoA ligase activity","termid":"GO:0031955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"2-methylbutanoate-CoA ligase activity","synonyms":[{"name":"branched chain acyl CoA synthetase (ADP-forming) activity","type":"exact"},{"name":"branched chain acyl-CoA synthetase (ADP-forming) activity","type":"exact"},{"name":"branched-chain acyl CoA synthetase (ADP-forming) activity","type":"exact"},{"name":"branched-chain acyl-CoA synthetase (ADP-forming) activity","type":"related"}],"termid":"GO:0043759"}


id: PBO:0091275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial aspartyl/glutamyl-tRNA amidotransferase subunit B-related Aim41","termid":"PBO:0091275"}


id: PBO:0046940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 66 member B","termid":"PBO:0046940"}


id: PBO:0036319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human NEDD4 family-interacting protein ortholog (predicted)","termid":"PBO:0036319"}


id: PBO:0049731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatitis A virus cellular receptor 1 pseudogene 2","termid":"PBO:0049731"}


id: PBO:0046374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosome associated trafficking regulator 1","termid":"PBO:0046374"}


id: PBO:0034589
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_lysophosphatidylethanolamine_level","termid":"PBO:0034589"}


id: GO:0090350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the chemical reactions and pathways involving organofluorine compounds, as carried out by individual cells.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular organofluorine metabolic process","termid":"GO:0090348"},{"relation_name":"is_a","term_name":"negative regulation of cellular organohalogen metabolic process","termid":"GO:0090349"},{"relation_name":"negatively_regulates","term_name":"cellular organofluorine metabolic process","termid":"GO:0090346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular organofluorine metabolic process","termid":"GO:0090350"}


id: PBO:0085954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; null mutant is viable but shows increased loss of mitochondrial genome and synthetic interaction with prohibitin (phb1); contains an intron; SWAT-GFP and mCherry fusion proteins localize to the mitochondria; YER093C-A has a paralog, YBL059W, that arose from the whole genome duplication","termid":"PBO:0085954"}


id: SO:0000617
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"This type of promoter recruits RNA pol III. This promoter is intragenic and includes an A box, an intermediate element, and a C box. This is well conserved in the 5s rRNA promoters across species.","definition_xrefs":["PMID:12381659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNApol_III_promoter","termid":"SO:0000171"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNApol_III_promoter_type_1","synonyms":[{"name":"RNApol III promoter type 1","type":"exact"}],"termid":"SO:0000617"}


id: PBO:0046459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermal growth factor receptor pathway substrate 15 pseudogene 1","termid":"PBO:0046459"}


id: GO:0000791
data:
  {"annotated_genes":["SJAG_03161","SJAG_03047","SJAG_03832","SJAG_03844","SJAG_03689","SJAG_02849","SJAG_00342","SJAG_02416","SJAG_03567","SJAG_01717","SJAG_03128","SJAG_00471","SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90394,98464,99476,101420,102233,102308,107323,108013,108104,108156,109443,109663,112045],"is_not":false,"summary":null,"term":"GO:0000791"}]},"cv_name":"cellular_component","definition":"A dispersed and relatively uncompacted form of chromatin that is in a transcription-competent conformation.","definition_xrefs":["PMID:32017156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00342":null,"SJAG_00471":null,"SJAG_01717":null,"SJAG_02416":null,"SJAG_02849":null,"SJAG_03047":null,"SJAG_03126":null,"SJAG_03128":null,"SJAG_03161":null,"SJAG_03567":null,"SJAG_03689":null,"SJAG_03832":null,"SJAG_03844":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"euchromatin","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0005719","NIF_Subcellular:sao445485807","GO:0035327","Wikipedia:Euchromatin"],"synonyms":[{"name":"nuclear euchromatin","type":"related"},{"name":"transcriptionally active chromatin","type":"exact"}],"termid":"GO:0000791","terms_by_termid":{"GO:0000791":null}}


id: PBO:0064931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPARG related coactivator 1","termid":"PBO:0064931"}


id: GO:0052782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any amino disaccharide, a disaccharide having one or more substituted or unsubstituted amino groups in place of hydroxy groups at unspecified positions.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino disaccharide metabolic process","termid":"GO:0052779"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amino disaccharide catabolic process","termid":"GO:0052782"}


id: PBO:0066745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 43","termid":"PBO:0066745"}


id: PBO:0089178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex ubiquitin-protein ligase E3 subunit Gid2/Rmd5","termid":"PBO:0089178"}


id: PBO:0068147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 454","termid":"PBO:0068147"}


id: PBO:0081070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 3","termid":"PBO:0081070"}


id: PBO:0042509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin related family member 3","termid":"PBO:0042509"}


id: PBO:0004112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic thiouridylase subunit Ctu1","termid":"PBO:0004112"}


id: PBO:0091538
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by human TPM1 skeletal muscle isoform","termid":"PBO:0091538"}


id: PR:Q9UUF3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC17A3.03c gene.","definition_xrefs":["UniProtKB:Q9UUF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine-protein phosphatase C17A3.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17A3.03c","synonyms":[{"name":"Spom972h-SPBC17A3.03c","type":"exact"}],"termid":"PR:Q9UUF3"}


id: PBO:0062327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 65","termid":"PBO:0062327"}


id: GO:0039699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An innate immune response evasion mechanism in which a symbiont methylates the 2'-O-ribose of the first or second transcribed nucleotide of its mRNAs. Methylation allows evasion of the host innate immune response, which degrades cap0 (non-methylated) mRNAs. This mechanism of immune evasion is used by viruses.","definition_xrefs":["PMID:35215972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated evasion of recognition by host innate immune effector","termid":"GO:0141177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated evasion of mRNA degradation by host via mRNA cap methylation","synonyms":[{"name":"IFIT mRNA restriction evasion by virus","type":"exact"},{"name":"evasion of mRNA degradation by host via mRNA cap methylation","type":"exact"},{"name":"viral mRNA cap methylation","type":"related"}],"termid":"GO:0039699"}


id: PBO:0004138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-oxoglutarate and Fe(II) dioxygenase domain containing protein 1","termid":"PBO:0004138"}


id: PBO:0044284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome X open reading frame 38","termid":"PBO:0044284"}


id: PBO:0090994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-aminoadipate transaminase/kynurenine-oxoglutarate transaminase","termid":"PBO:0090994"}


id: GO:0031320
data:
  {"annotated_genes":["SJAG_00237"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046526"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: hexitol + acceptor = hexose + reduced acceptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"hexitol dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031320","terms_by_termid":{"GO:0046526":null}}


id: PBO:0043352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLPTM1L pseudogene 1","termid":"PBO:0043352"}


id: GO:0015957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a bis(5'-nucleosidyl) oligophosphate, a compound formed of two nucleosides joined together through their 5' carbons by a chain of phosphate molecules.","definition_xrefs":["GOC:mah","PMID:10970777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"},{"relation_name":"is_a","term_name":"bis(5'-nucleosidyl) oligophosphate metabolic process","termid":"GO:0015956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"bis(5'-nucleosidyl) oligophosphate biosynthetic process","synonyms":[{"name":"bis(5'-nucleosidyl) oligophosphate anabolism","type":"exact"},{"name":"bis(5'-nucleosidyl) oligophosphate biosynthesis","type":"exact"},{"name":"bis(5'-nucleosidyl) oligophosphate formation","type":"exact"},{"name":"bis(5'-nucleosidyl) oligophosphate synthesis","type":"exact"}],"termid":"GO:0015957"}


id: FYPO:0002522
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which the export of polyadenylated mRNA from the nucleus is decreased. Export of all polyadenylated mRNAs or a specific mRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"increased nuclear polyadenylated mRNA level during vegetative growth","termid":"FYPO:0003119"},{"relation_name":"is_a","term_name":"abnormal poly(A)+ mRNA export from nucleus","termid":"FYPO:0000183"},{"relation_name":"is_a","term_name":"decreased nuclear export","termid":"FYPO:0000508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"decreased poly(A)+ mRNA export from nucleus","synonyms":[{"name":"decreased poly(A)+ mRNA export from nucleus during mitotic cell cycle","type":"related"},{"name":"decreased poly(A)+ mRNA export from nucleus during vegetative growth","type":"exact"},{"name":"decreased polyadenylated mRNA export from nucleus","type":"exact"},{"name":"reduced poly(A)+ mRNA export from nucleus","type":"exact"}],"termid":"FYPO:0002522"}


id: PBO:0045475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dorsal root ganglia homeobox","termid":"PBO:0045475"}


id: FYPO:0005327
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the repair of cyclobutane pyrimidine dimers by error-free translesion synthesis does not occur.","definition_xrefs":["PMID:20453833","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal error-free translesion synthesis","termid":"FYPO:0005323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000293","FYPO:0000002","FYPO:0000298","FYPO:0001985"],"is_obsolete":false,"name":"abolished error-free translesion synthesis of cyclobutane pyrimidine dimers","synonyms":[{"name":"abolished error-free translesion synthesis across TT-CPD","type":"exact"},{"name":"abolished error-free translesion synthesis of cyclobutane pyrimidine dimers during mitotic cell cycle","type":"related"},{"name":"abolished error-free translesion synthesis of cyclobutane pyrimidine dimers during vegetative growth","type":"exact"},{"name":"error-free translesion synthesis of cyclobutane pyrimidine dimers abolished","type":"related"}],"termid":"FYPO:0005327"}


id: PBO:0072278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S23 pseudogene 7","termid":"PBO:0072278"}


id: PBO:0075178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPE pseudogene 8","termid":"PBO:0075178"}


id: GO:0014908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a myotube cell. Myotube differentiation starts with myoblast fusion and the appearance of specific cell markers (this is the cell development step). Then individual myotubes can fuse to form bigger myotubes and start to contract. This process occurs as part of the process of skeletal muscle regeneration. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myotube differentiation","termid":"GO:0014902"},{"relation_name":"part_of","term_name":"skeletal muscle tissue regeneration","termid":"GO:0043403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myotube differentiation involved in skeletal muscle regeneration","termid":"GO:0014908"}


id: PBO:0074125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 30 member 8","termid":"PBO:0074125"}


id: PBO:0090032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-keto sterol reductase Erg27","termid":"PBO:0090032"}


id: PATO:0002451
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's exhibiting a phenotypic difference between males and females of the same species.","definition_xrefs":["PATOC:WC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organismal quality","termid":"PATO:0001995"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sexually dimorphic","termid":"PATO:0002451"}


id: GO:0097114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The receptor clustering process in which N-methyl-D-aspartate (NMDA) receptors are localized to distinct domains in the cell membrane.","definition_xrefs":["GOC:sjp","GOC:BHF","PMID:15620359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter-gated ion channel clustering","termid":"GO:0072578"},{"relation_name":"part_of","term_name":"postsynaptic membrane organization","termid":"GO:0001941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"NMDA glutamate receptor clustering","synonyms":[{"name":"N-methyl-D-aspartate receptor clustering","type":"exact"},{"name":"NMDA receptor clustering","type":"exact"}],"termid":"GO:0097114"}


id: GO:0090307
data:
  {"annotated_genes":["SJAG_03116","SJAG_00773","SJAG_01613","SJAG_04745","SJAG_02246","SJAG_03073","SJAG_02336","SJAG_01546","SJAG_04901","SJAG_04841","SJAG_01215","SJAG_03835","SJAG_04464","SJAG_00794","SJAG_03540","SJAG_02761","SJAG_03062","SJAG_01297","SJAG_00244","SJAG_01224","SJAG_02332","SJAG_07018","SJAG_02609"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92838,92937,93354,96445,97046,105662,106640,111113,114726],"is_not":false,"summary":null,"term":"GO:0090307"},{"annotations":[91369,90825,74532],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000073"},{"annotations":[105079,92835,95284,99113],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990810"},{"annotations":[95914,90829,94687,96447,104315,97494,93355,99965],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061804"},{"annotations":[95290,97495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140641"},{"annotations":[95291,97496,90830,104906,93356],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051256"},{"annotations":[107495],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0110161"},{"annotations":[107072],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1901673"}]},"cv_name":"biological_process","definition":"Mitotic bipolar spindle assembly begins with spindle microtubule nucleation from the separated spindle pole body, includes spindle elongation during prometaphase, and is complete when all kinetochores are stably attached the spindle, and the spindle assembly checkpoint is satisfied.","definition_xrefs":["GOC:tb","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic spindle organization","termid":"GO:0007052"},{"relation_name":"is_a","term_name":"spindle assembly","termid":"GO:0051225"},{"relation_name":"part_of","term_name":"mitotic sister chromatid segregation","termid":"GO:0000070"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00773":null,"SJAG_00794":null,"SJAG_01215":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_02246":null,"SJAG_02332":null,"SJAG_02336":null,"SJAG_02609":null,"SJAG_02761":null,"SJAG_03062":null,"SJAG_03073":null,"SJAG_03116":null,"SJAG_03540":null,"SJAG_03835":null,"SJAG_04464":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_04901":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0000070","GO:0007010","GO:0000226","GO:0044085"],"is_obsolete":false,"name":"mitotic spindle assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"spindle assembly involved in mitosis","type":"exact"}],"termid":"GO:0090307","terms_by_termid":{"GO:0000073":null,"GO:0051256":null,"GO:0061804":null,"GO:0090307":null,"GO:0110161":null,"GO:0140641":null,"GO:1901673":null,"GO:1990810":null}}


id: PBO:0063283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily A, 9","termid":"PBO:0063283"}


id: PBO:0017747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMPACT homolog, cytoplasmic translational regulator Yih1 (predicted)","termid":"PBO:0017747"}


id: MOD:00769
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Natural or modified residues with a mass of 71.0-71.1 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at a resolution below 0.1 Da","termid":"MOD:00616"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at 71.0-71.1 Da","termid":"MOD:00769"}


id: PBO:0113739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C18orf21 pseudogene 1","termid":"PBO:0113739"}


id: GO:2000012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of auxin polar transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hormone levels","termid":"GO:0010817"},{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"auxin polar transport","termid":"GO:0009926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of auxin polar transport","termid":"GO:2000012"}


id: GO:0021834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation and reception of signals that guide olfactory bulb interneuron precursors down concentration gradients towards the olfactory bulb.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:cls","GOC:jid","PMID:12626695","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative chemotaxis","termid":"GO:0050919"},{"relation_name":"part_of","term_name":"embryonic olfactory bulb interneuron precursor migration","termid":"GO:0021831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemorepulsion involved in embryonic olfactory bulb interneuron precursor migration","synonyms":[{"name":"negative chemotaxis involved in embryonic olfactory bulb interneuron precursor migration","type":"exact"}],"termid":"GO:0021834"}


id: PBO:0050209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 26","termid":"PBO:0050209"}


id: GO:0035026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features of leading edge cells, cells at the front of a migrating epithelial sheet.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leading edge cell differentiation","termid":"GO:0035026"}


id: PBO:0044291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome X open reading frame 66","termid":"PBO:0044291"}


id: PBO:0043469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 7 pseudogene 1","termid":"PBO:0043469"}


id: PBO:0045965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGLN3 antisense RNA 1","termid":"PBO:0045965"}


id: PBO:0029297
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_S-adenosyl-L-methionine_level_during_G0","termid":"PBO:0029297"}


id: FYPO:0002167
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ethyl methanesulfonate. Cells stop growing (and may die) at a concentration of ethyl methanesulfonate that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to DNA damaging agents","termid":"FYPO:0000266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to ethyl methanesulfonate","synonyms":[{"name":"hypersensitive to ethyl methanesulfonate","type":"exact"},{"name":"sensitive to EMS","type":"exact"},{"name":"sensitive to ethyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"sensitive to ethyl methanesulfonate during vegetative growth","type":"exact"},{"name":"sensitive to ethyl methanesulphonate","type":"exact"}],"termid":"FYPO:0002167"}


id: PBO:0039069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argonaute RISC component 1","termid":"PBO:0039069"}


id: PBO:0065086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase AMP-activated non-catalytic subunit beta 1","termid":"PBO:0065086"}


id: PBO:0063363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proprotein convertase subtilisin/kexin type 2","termid":"PBO:0063363"}


id: GO:0042093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized thymocyte acquires specialized features of a T-helper cell.","definition_xrefs":["GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell differentiation involved in immune response","termid":"GO:0002294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper cell differentiation","synonyms":[{"name":"T-helper cell development","type":"related"},{"name":"helper T cell differentiation","type":"exact"}],"termid":"GO:0042093"}


id: MOD:01064
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol","termid":"MOD:01064"}


id: GO:1901758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of butirosin.","definition_xrefs":["UniPathway:UPA00964","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"butirosin metabolic process","termid":"GO:1901756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"butirosin biosynthetic process","synonyms":[{"name":"butirosin anabolism","type":"exact"},{"name":"butirosin biosynthesis","type":"exact"},{"name":"butirosin formation","type":"exact"},{"name":"butirosin synthesis","type":"exact"}],"termid":"GO:1901758"}


id: GO:1901533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hematopoietic progenitor cell differentiation.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of hematopoietic progenitor cell differentiation","termid":"GO:1901532"},{"relation_name":"negatively_regulates","term_name":"hematopoietic progenitor cell differentiation","termid":"GO:0002244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hematopoietic progenitor cell differentiation","synonyms":[{"name":"down regulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"down regulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"down regulation of hematopoietic progenitor cell differentiation","type":"related"},{"name":"down regulation of hemopoietic progenitor cell differentiation","type":"exact"},{"name":"down-regulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"down-regulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"down-regulation of hematopoietic progenitor cell differentiation","type":"related"},{"name":"down-regulation of hemopoietic progenitor cell differentiation","type":"exact"},{"name":"downregulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"downregulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"downregulation of hematopoietic progenitor cell differentiation","type":"related"},{"name":"downregulation of hemopoietic progenitor cell differentiation","type":"exact"},{"name":"inhibition of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"inhibition of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"inhibition of hematopoietic progenitor cell differentiation","type":"related"},{"name":"inhibition of hemopoietic progenitor cell differentiation","type":"narrow"},{"name":"negative regulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"negative regulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"negative regulation of hemopoietic progenitor cell differentiation","type":"exact"}],"termid":"GO:1901533"}


id: PBO:0057427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 549a","termid":"PBO:0057427"}


id: GO:1901396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of transforming growth factor beta2 activation.","definition_xrefs":["GOC:sl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transforming growth factor beta2 activation (obsolete GO:1901396)","synonyms":[{"name":"down regulation of TGF-beta 2 activation","type":"exact"},{"name":"down regulation of TGFB2 activation","type":"exact"},{"name":"down regulation of TGFbeta 2 activation","type":"exact"},{"name":"down regulation of transforming growth factor beta2 activation","type":"exact"},{"name":"down-regulation of TGF-beta 2 activation","type":"exact"},{"name":"down-regulation of TGFB2 activation","type":"exact"},{"name":"down-regulation of TGFbeta 2 activation","type":"exact"},{"name":"down-regulation of transforming growth factor beta2 activation","type":"exact"},{"name":"downregulation of TGF-beta 2 activation","type":"exact"},{"name":"downregulation of TGFB2 activation","type":"exact"},{"name":"downregulation of TGFbeta 2 activation","type":"exact"},{"name":"downregulation of transforming growth factor beta2 activation","type":"exact"},{"name":"inhibition of TGF-beta 2 activation","type":"exact"},{"name":"inhibition of TGFB2 activation","type":"exact"},{"name":"inhibition of TGFbeta 2 activation","type":"exact"},{"name":"inhibition of transforming growth factor beta2 activation","type":"narrow"},{"name":"negative regulation of TGF-beta 2 activation","type":"exact"},{"name":"negative regulation of TGFB2 activation","type":"exact"},{"name":"negative regulation of TGFbeta 2 activation","type":"exact"}],"termid":"GO:1901396"}


id: GO:0031133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, direction or extent of axon growth such that the correct diameter is attained and maintained.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell projection size","termid":"GO:0032536"},{"relation_name":"is_a","term_name":"regulation of axonogenesis","termid":"GO:0050770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of axon diameter","termid":"GO:0031133"}


id: PBO:0080031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 17","termid":"PBO:0080031"}


id: GO:0000124
data:
  {"annotated_genes":["SJAG_02927","SJAG_03107","SJAG_03776","SJAG_04205","SJAG_02773","SJAG_02066","SJAG_02458","SJAG_00184","SJAG_04613","SJAG_00087","SJAG_03599","SJAG_01658","SJAG_01711","SJAG_01475","SJAG_04274","SJAG_03668","SJAG_00641","SJAG_02541","SJAG_00584","SJAG_03752"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84410,84559,85344,87459,93880,94564,99427,99679,101813,102946,103380,103735,107809,108609,109038,110368,111451,112356,113630,113679],"is_not":false,"summary":null,"term":"GO:0000124"}]},"cv_name":"cellular_component","definition":"A SAGA-type histone acetyltransferase complex that deubiquitinates H2A and/or H2B. This complex is organized into several functional submodules: a structural core including the activator binding module and consisting of ADA1 or a homolog, members of the SPT and TAF protein families as well as promotor recruitment factor TRRAP/TRA1, a histone acetyltransferase (HAT) module consisting of GCN5/KAT2A or PCAF/KAT2B, ADA2, ADA3/NGG1, and SGF29 or homologues thereof, a histone deubiquitinase (DUB) module consisting of ATXN7/SGF73, ATXN7L3/SGF11, ENY2/SUS1 and USP22/UBP8 or homologues thereof, and in some taxa a splicing module consisting of SF3B3 and SF3B5 or homologues thereof (not in fungi). In budding yeast also contains Spt8 which distinguishes it from SAGA-like (SLIK) complex (GO:0046695).","definition_xrefs":["PMID:17337012","PMID:19056896","PMID:20838651","PMID:33004486","PMID:10637607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SAGA-type complex","termid":"GO:0070461"},{"relation_name":"is_a","term_name":"peptidase complex","termid":"GO:1905368"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00087":null,"SJAG_00184":null,"SJAG_00584":null,"SJAG_00641":null,"SJAG_01475":null,"SJAG_01658":null,"SJAG_01711":null,"SJAG_02066":null,"SJAG_02458":null,"SJAG_02541":null,"SJAG_02773":null,"SJAG_02927":null,"SJAG_03107":null,"SJAG_03599":null,"SJAG_03668":null,"SJAG_03752":null,"SJAG_03776":null,"SJAG_04205":null,"SJAG_04274":null,"SJAG_04613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"SAGA complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000125","GO:0030914"],"synonyms":[{"name":"PCAF complex","type":"narrow"},{"name":"PCAF histone acetylase-associated complex","type":"narrow"},{"name":"SPT3-TAF9-GCN5 acetylase complex","type":"related"},{"name":"SPT3-TAF9-PCAF acetylase complex","type":"narrow"},{"name":"STAGA coactivator complex","type":"related"},{"name":"STAGA complex","type":"related"},{"name":"Spt-Ada-Gcn5-acetyltransferase complex","type":"exact"}],"termid":"GO:0000124","terms_by_termid":{"GO:0000124":null}}


id: GO:0047745
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: chlorogenate + H2O = (-)-quinate + cis-caffeate + H+.","definition_xrefs":["EC:3.1.1.42","RHEA:20689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"chlorogenate hydrolase activity","secondary_identifiers":["MetaCyc:CHLOROGENATE-HYDROLASE-RXN","KEGG_REACTION:R02997"],"synonyms":[{"name":"chlorogenase activity","type":"related"},{"name":"chlorogenic acid esterase activity","type":"related"}],"termid":"GO:0047745"}


id: PBO:0060332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin IIIB","termid":"PBO:0060332"}


id: PBO:0038983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenoceptor alpha 1D","termid":"PBO:0038983"}


id: PBO:0005167
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rik1-Associated Factor","termid":"PBO:0005167"}


id: PBO:0071632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 51","termid":"PBO:0071632"}


id: GO:1904666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ubiquitin protein ligase activity.","definition_xrefs":["GOC:vw","GOC:dph","PMID:10921876","PMID:26216882","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ubiquitin-protein transferase activity","termid":"GO:0051438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ubiquitin protein ligase activity","secondary_identifiers":["GO:1903834"],"synonyms":[{"name":"regulation of APC-fizzy related complex activity","type":"narrow"},{"name":"regulation of E3","type":"related"},{"name":"regulation of protein ubiquitination activity","type":"exact"},{"name":"regulation of ubiquitin ligase activity","type":"exact"}],"termid":"GO:1904666"}


id: GO:0050179
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-threo-3-phenylserine = benzaldehyde + glycine.","definition_xrefs":["RHEA:21712","EC:4.1.2.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phenylserine aldolase activity","secondary_identifiers":["KEGG_REACTION:R01766","MetaCyc:PHENYLSERINE-ALDOLASE-RXN"],"synonyms":[{"name":"L-threo-3-phenylserine benzaldehyde-lyase (glycine-forming)","type":"related"},{"name":"L-threo-3-phenylserine benzaldehyde-lyase activity","type":"related"}],"termid":"GO:0050179"}


id: PBO:0057022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR122 host gene","termid":"PBO:0057022"}


id: PR:Q9HE12
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A solute carrier family 23 member 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purine permease C1399.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1399.01c","secondary_identifiers":["UniProtKB:Q9HE12"],"synonyms":[{"name":"Spom972h-SLC23A2","type":"exact"}],"termid":"PR:Q9HE12"}


id: PBO:0053891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1173","termid":"PBO:0053891"}


id: GO:0051503
data:
  {"annotated_genes":["SJAG_04325","SJAG_04328","SJAG_02050","SJAG_00612","SJAG_03452","SJAG_03334"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035348"},{"annotations":[98918,106948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015866"},{"annotations":[106949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015867"},{"annotations":[97411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"},{"annotations":[97412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"},{"annotations":[106950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140021"},{"annotations":[98919,106951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990544"},{"annotations":[86888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990559"},{"annotations":[88955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990549"}]},"cv_name":"biological_process","definition":"The directed movement of adenine nucleotides, ATP, ADP, and/or AMP, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide transport","termid":"GO:0015865"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00612":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_03452":null,"SJAG_04325":null,"SJAG_04328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"adenine nucleotide transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051503","terms_by_termid":{"GO:0015866":null,"GO:0015867":null,"GO:0035348":null,"GO:0140021":null,"GO:1990544":null,"GO:1990549":null,"GO:1990553":null,"GO:1990554":null,"GO:1990559":null}}


id: PBO:0066847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 147","termid":"PBO:0066847"}


id: GO:0060041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates.","definition_xrefs":["GOC:bf","ISBN:0815340729","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"camera-type eye development","termid":"GO:0043010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retina development in camera-type eye","secondary_identifiers":["GO:0002073"],"synonyms":[{"name":"retina development in camera-style eye","type":"exact"},{"name":"retinal development","type":"related"}],"termid":"GO:0060041"}


id: PBO:0073570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shisa family member 3","termid":"PBO:0073570"}


id: PR:000027561
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2A-alpha unphosphorylated form in Schizosaccharomyces pombe.","definition_xrefs":["PMID:19965387","PMID:21516229","PMID:15226425","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A-alpha (Schizosaccharomyces pombe 972h-)","termid":"PR:P04909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A-alpha unphosphorylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPCC622.08c","synonyms":[{"name":"Spom-hta1/UnMod","type":"exact"}],"termid":"PR:000027561"}


id: PBO:0062305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily P member 2","termid":"PBO:0062305"}


id: GO:0070210
data:
  {"annotated_genes":["SJAG_03441","SJAG_00868","SJAG_04396","SJAG_03627","SJAG_03230","SJAG_03867","SJAG_02439","SJAG_03255","SJAG_04758","SJAG_02981","SJAG_04389","SJAG_01926","SJAG_04576","SJAG_00441","SJAG_02846","SJAG_00581","SJAG_01230"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74782,77656,85173,89247,89284,90700,91507,93283,98842,99915,100768,101070,102794,105512,106527,110207,110297],"is_not":false,"summary":null,"term":"GO:0070210"}]},"cv_name":"cellular_component","definition":"A protein complex that contains a histone deacetylase and is part of the chromatin remodeling machinery. In Saccharomyces cerevisiae this complex contains the Rpd3p, Sin3p, Ume1p, Pho23p, Sap30p, Sds3p, Cti6p, Rxt2p, Rxt3p, Dep1p, Ume6p, Ash1p, Dot6p, Snt1, Sif2p, Set3p, Hos2p, Tos4p and Tod6p proteins.","definition_xrefs":["PMID:19040720","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase complex","termid":"GO:0000118"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00441":null,"SJAG_00581":null,"SJAG_00868":null,"SJAG_01230":null,"SJAG_01926":null,"SJAG_02439":null,"SJAG_02846":null,"SJAG_02981":null,"SJAG_03230":null,"SJAG_03255":null,"SJAG_03441":null,"SJAG_03627":null,"SJAG_03867":null,"SJAG_04389":null,"SJAG_04396":null,"SJAG_04576":null,"SJAG_04758":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0005654","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"Rpd3L-Expanded complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Clr6-LE complex","type":"exact"}],"termid":"GO:0070210","terms_by_termid":{"GO:0070210":null}}


