# terms

id: GO:0102252
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: n H2O + a cellodextrin = n beta-cellobiose, releasing cellobiose from the reducing ends of the chains.","definition_xrefs":["EC:3.2.1.176","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"cellulose 1,4-beta-cellobiosidase activity (reducing end)","secondary_identifiers":["MetaCyc:RXN-12420"],"termid":"GO:0102252"}


id: PBO:0085150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleoside monophosphate and nucleoside diphosphate kinase; functions in the de novo biosynthesis of pyrimidine deoxyribonucleotides; thymidylate/uridylate kinase that converts nucleoside monophosphates, dTMP and dUMP to nucleoside diphosphates, dTDP and dUDP; nucleoside diphosphate kinase that converts nucleoside diphosphates, dTDP and dUDP to dTTP and dUTP; essential for mitotic and meiotic DNA replication; homologous to S. pombe tmp1; human homolog DTYMK can complement the cdc8 null mutant","termid":"PBO:0085150"}


id: PBO:0071791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P/MRP subunit p30","termid":"PBO:0071791"}


id: PBO:0083063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydroorotase; catalyzes the third enzymatic step in the de novo biosynthesis of pyrimidines, converting carbamoyl-L-aspartate into dihydroorotate","termid":"PBO:0083063"}


id: GO:0005834
data:
  {"annotated_genes":["SJAG_02233","SJAG_04026","SJAG_02444","SJAG_03081"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90284,102537,103184,105063],"is_not":false,"summary":null,"term":"GO:0005834"}]},"cv_name":"cellular_component","definition":"Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G protein-coupled receptors to an effector protein.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"GTPase complex","termid":"GO:1905360"},{"relation_name":"part_of","term_name":"extrinsic component of cytoplasmic side of plasma membrane","termid":"GO:0031234"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02233":null,"SJAG_02444":null,"SJAG_03081":null,"SJAG_04026":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"heterotrimeric G-protein complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"heterotrimeric G-protein GTPase activity","type":"related"},{"name":"heterotrimeric G-protein GTPase, alpha-subunit","type":"narrow"},{"name":"heterotrimeric G-protein GTPase, beta-subunit","type":"narrow"},{"name":"heterotrimeric G-protein GTPase, gamma-subunit","type":"narrow"}],"termid":"GO:0005834","terms_by_termid":{"GO:0005834":null}}


id: GO:1905567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:22848640","GOC:BHF","GOC:nc"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport (obsolete GO:1905567)","synonyms":[{"name":"activation of receptor-mediated endocytosis of LDL","type":"narrow"},{"name":"activation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"activation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"narrow"},{"name":"positive regulation of receptor-mediated endocytosis of LDL","type":"exact"},{"name":"positive regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"up regulation of receptor-mediated endocytosis of LDL","type":"exact"},{"name":"up regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"up regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"exact"},{"name":"up-regulation of receptor-mediated endocytosis of LDL","type":"exact"},{"name":"up-regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"up-regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"exact"},{"name":"upregulation of receptor-mediated endocytosis of LDL","type":"exact"},{"name":"upregulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"upregulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"exact"}],"termid":"GO:1905567"}


id: PBO:0002885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Imp3 (predicted)","termid":"PBO:0002885"}


id: FYPO:0006666
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which double-strand break processing extends for a longer distance from the breaks site than normal. Double-strand break processing is the 5' to 3' exonucleolytic resection of the DNA at the site of the break to form a 3' single-strand DNA overhang.","definition_xrefs":["GO:0000729","PMID:29697047","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal double-strand break processing","termid":"FYPO:0002553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000293"],"is_obsolete":false,"name":"increased spatial extent of double-strand break processing","synonyms":[{"name":"increased spatial extent of DSB processing","type":"exact"},{"name":"increased spatial extent of double-strand break processing during mitotic cell cycle","type":"related"},{"name":"increased spatial extent of double-strand break processing during vegetative growth","type":"exact"},{"name":"increased spatial extent of double-strand break resection","type":"exact"}],"termid":"FYPO:0006666"}


id: PBO:0005621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"riboflavin synthase","termid":"PBO:0005621"}


id: FYPO:0005713
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which cell cycle regulation mediated by the mitotic cytokinesis checkpoint does not occur under conditions that normally trigger the checkpoint signaling and response. Normally, the cytokinesis checkpoint normally delays the G2/M transition of a mitotic cell cycle if cytokinesis was not completed correctly in the previous cell cycle.","definition_xrefs":["GO:0044878","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis checkpoint","termid":"FYPO:0003830"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0000298","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished cytokinesis checkpoint","synonyms":[{"name":"abolished cytokinesis checkpoint during mitotic cell cycle","type":"exact"},{"name":"abolished cytokinesis checkpoint during vegetative growth","type":"exact"},{"name":"abolished mitotic cytokinesis checkpoint","type":"exact"}],"termid":"FYPO:0005713"}


id: GO:0090163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of the polarity of an epithelial cell along the plane of the epithelial tissue.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of epithelial cell polarity","termid":"GO:0090162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment of epithelial cell planar polarity","termid":"GO:0090163"}


id: GO:0006038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of cell wall chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues, found in the walls of cells.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cell wall chitin biosynthetic process (obsolete GO:0006038)","synonyms":[{"name":"cell wall chitin anabolism","type":"exact"},{"name":"cell wall chitin biosynthesis","type":"exact"},{"name":"cell wall chitin formation","type":"exact"},{"name":"cell wall chitin synthesis","type":"exact"}],"termid":"GO:0006038"}


id: PBO:0058419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4788","termid":"PBO:0058419"}


id: FYPO:0005734
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate dehydrogenase activity using NAPD+ as a cofactor is decreased during a cellular response to iron ion starvation.","definition_xrefs":["PomBase:mah","PMID:20435771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased glutamate dehydrogenase (NADP+) activity","termid":"FYPO:0000983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"decreased glutamate dehydrogenase (NADP+) activity during cellular response to iron ion starvation","synonyms":[{"name":"decreased NAD(P)H-dependent glutamate dehydrogenase activity during cellular response to iron ion starvation","type":"exact"},{"name":"decreased NADP-GDH activity during cellular response to iron ion starvation","type":"exact"},{"name":"decreased glutamate dehydrogenase (NADP+) activity during iron ion starvation","type":"exact"}],"termid":"FYPO:0005734"}


id: FYPO:0007283
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the lateral cell cortex is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:26960792","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell cortex during vegetative growth","termid":"FYPO:0001402"},{"relation_name":"is_a","term_name":"normal protein localization to cytoplasm","termid":"FYPO:0001788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to lateral cell cortex during vegetative growth","synonyms":[{"name":"normal protein localisation to lateral cell cortex during vegetative growth","type":"exact"},{"name":"normal protein localization to cell side during vegetative growth","type":"related"},{"name":"normal protein localization to lateral cell cortex during mitotic cell cycle","type":"related"},{"name":"normal protein localization to lateral cortex during vegetative growth","type":"exact"}],"termid":"FYPO:0007283"}


id: PBO:0061214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 6","termid":"PBO:0061214"}


id: PBO:0090732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQGAP domain cytoskeleton scaffold protein Rng2","termid":"PBO:0090732"}


id: GO:0052199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of enzyme activity in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of catalytic activity in other organism involved in symbiotic interaction (obsolete GO:0052199)","synonyms":[{"name":"down regulation of enzyme activity in other organism during symbiotic interaction","type":"related"},{"name":"down-regulation of enzyme activity in other organism during symbiotic interaction","type":"related"},{"name":"downregulation of enzyme activity in other organism during symbiotic interaction","type":"related"},{"name":"inhibition of enzyme activity in other organism","type":"exact"},{"name":"inhibition of enzyme activity in other organism during symbiotic interaction","type":"narrow"},{"name":"negative regulation of enzyme activity in other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0052199"}


id: FYPO:0003010
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin in subtelomeric regions is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to heterochromatin during vegetative growth","termid":"FYPO:0001131"},{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"},{"relation_name":"is_a","term_name":"increased protein localization to telomere during vegetative growth","termid":"FYPO:0004656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to subtelomeric heterochromatin during vegetative growth","secondary_identifiers":["FYPO:0004379"],"synonyms":[{"name":"increased protein localisation to subtelomeric heterochromatin","type":"exact"},{"name":"increased protein localization to heterochromatin at subtelomere","type":"exact"},{"name":"increased protein localization to subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"increased protein localization to telomeric heterochromatin","type":"related"}],"termid":"FYPO:0003010"}


id: GO:0045027
data:
  {"annotated_genes":["SJAG_05373","SJAG_05020","SJAG_01677","SJAG_01076","SJAG_05295","SJAG_02079"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83879,84619,85242,86354,92244,112885],"is_not":false,"summary":null,"term":"GO:0045027"}]},"cv_name":"molecular_function","definition":"Binding to DNA ends exposed by the creation of double-strand breaks (DSBs).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01076":null,"SJAG_01677":null,"SJAG_02079":null,"SJAG_05020":null,"SJAG_05295":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"DNA end binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0045027","terms_by_termid":{"GO:0045027":null}}


id: PBO:0075045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-8","termid":"PBO:0075045"}


id: FYPO:0004663
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a normal proportion of cells in the population remains viable after exposure to methyl methanesulfonate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"normal viability following cellular response to methyl methanesulfonate","synonyms":[{"name":"normal cell population viability following cellular response to methyl methanesulfonate","type":"exact"},{"name":"normal viability following MMS exposure","type":"exact"},{"name":"normal viability following cellular response to MMS","type":"exact"},{"name":"normal viability following cellular response to methyl methanesulphonate","type":"exact"}],"termid":"FYPO:0004663"}


id: PBO:0075842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU72 like 3","termid":"PBO:0075842"}


id: SO:0000494
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 9 nucleotide recombination site (e.g. ACAAAAACC), part of a 3' D-recombination signal sequence of an immunoglobulin/T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"nonamer_of_recombination_feature_of_vertebrate_immune_system_gene","termid":"SO:0000562"},{"relation_name":"part_of","term_name":"three_prime_D_recombination_signal_sequence","termid":"SO:0000570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_D_nonamer","synonyms":[{"name":"3'D-NOMAMER","type":"exact"},{"name":"three prime D nonamer","type":"exact"}],"termid":"SO:0000494"}


id: PBO:0001295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate 5-kinase (predicted)","termid":"PBO:0001295"}


id: SO:0001604
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant within a CDS resulting in the loss of an amino acid from the resulting polypeptide.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_sequence_variant","termid":"SO:0001603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino_acid_deletion","synonyms":[{"name":"amino acid deletion","type":"exact"}],"termid":"SO:0001604"}


id: PBO:0080014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 16","termid":"PBO:0080014"}


id: FYPO:0005487
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of iron-sulfur cluster binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal iron-sulfur cluster binding","termid":"FYPO:0001709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"decreased iron-sulfur cluster binding","synonyms":[{"name":"decreased iron-sulphur cluster binding","type":"exact"},{"name":"reduced iron-sulfur cluster binding","type":"exact"}],"termid":"FYPO:0005487"}


id: MOD:00559
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other","definition_xrefs":["Unimod:208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acrolein addition +76","synonyms":[{"name":"Acrolein addition +76","type":"related"},{"name":"Delta:H(4)C(6)","type":"related"}],"termid":"MOD:00559"}


id: PBO:0054313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1705","termid":"PBO:0054313"}


id: PBO:0053759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1001","termid":"PBO:0053759"}


id: RO:0002463
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"partner_in","termid":"RO:0002461"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target_participant_in","termid":"RO:0002463"}


id: PBO:0078320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta joining 2","termid":"PBO:0078320"}


id: GO:0031719
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 cannabinoid receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cannabinoid receptor binding","termid":"GO:0031717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type 2 cannabinoid receptor binding","synonyms":[{"name":"type 2 cannabinoid receptor ligand","type":"narrow"}],"termid":"GO:0031719"}


id: GO:0015399
data:
  {"annotated_genes":["SJAG_05629","SJAG_07006","SJAG_03490","SJAG_02457","SJAG_01913","SJAG_01597","SJAG_01355","SJAG_03363","SJAG_03337","SJAG_07007","SJAG_00976","SJAG_01344","SJAG_00373","SJAG_02602","SJAG_05294","SJAG_01435","SJAG_00212","SJAG_02646","SJAG_01879","SJAG_01669","SJAG_04955","SJAG_05213","SJAG_03406","SJAG_03497","SJAG_00601","SJAG_04167","SJAG_00136","SJAG_02399","SJAG_03502","SJAG_01447","SJAG_01817","SJAG_01190","SJAG_MIT04","SJAG_MIT13","SJAG_04258","SJAG_04152","SJAG_01471","SJAG_03358","SJAG_03850","SJAG_03785","SJAG_03866","SJAG_01400","SJAG_02077","SJAG_03560","SJAG_04277","SJAG_04757","SJAG_01077","SJAG_01397","SJAG_02023","SJAG_03415","SJAG_00755","SJAG_02782","SJAG_MIT03","SJAG_01490","SJAG_01129","SJAG_00516","SJAG_MIT20","SJAG_03515","SJAG_02504","SJAG_04015"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140481"},{"annotations":[104721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015410"},{"annotations":[103239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015421"},{"annotations":[93121,114266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044604"},{"annotations":[108407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140679"},{"annotations":[97648,96936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140359"},{"annotations":[92133,114019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008559"},{"annotations":[97077,111154,91519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019829"},{"annotations":[114269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042626"},{"annotations":[85289,112897,115141,115142,115092,104338,110292,115113,87999,111526,110721,115114,84270],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004129"},{"annotations":[108918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008137"},{"annotations":[104725,97690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005388"},{"annotations":[103910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043682"},{"annotations":[97079,111155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015662"},{"annotations":[103911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140581"},{"annotations":[108410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008556"},{"annotations":[108411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008900"},{"annotations":[83777,83776,109839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008553"},{"annotations":[108412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008554"},{"annotations":[91520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140358"},{"annotations":[103646,103624,107863,95602,99347,101233,92952,86954,96381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015450"},{"annotations":[96000,88101,86226,94977,97696,99977,91719,92682,85916,98735,96076,105924,114791,84110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046961"},{"annotations":[113755,100142,100547,114224,109466,104015,115118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008121"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute from one side of a membrane to the other, up the solute's concentration gradient, by binding the solute and undergoing a series of conformational changes. Transport works equally well in either direction and is powered by a primary energy source. Primary energy sources known to be coupled to transport are chemical such as ATP hydrolysis, redox energy and photon energy.","definition_xrefs":["GOC:mtg_transport","PMID:31613498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"active transmembrane transporter activity","termid":"GO:0022804"}],"gene_count":60,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00373":null,"SJAG_00516":null,"SJAG_00601":null,"SJAG_00755":null,"SJAG_00976":null,"SJAG_01077":null,"SJAG_01129":null,"SJAG_01190":null,"SJAG_01344":null,"SJAG_01355":null,"SJAG_01397":null,"SJAG_01400":null,"SJAG_01435":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01490":null,"SJAG_01597":null,"SJAG_01669":null,"SJAG_01817":null,"SJAG_01879":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02077":null,"SJAG_02399":null,"SJAG_02457":null,"SJAG_02504":null,"SJAG_02602":null,"SJAG_02646":null,"SJAG_02782":null,"SJAG_03337":null,"SJAG_03358":null,"SJAG_03363":null,"SJAG_03406":null,"SJAG_03415":null,"SJAG_03490":null,"SJAG_03497":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_03785":null,"SJAG_03850":null,"SJAG_03866":null,"SJAG_04015":null,"SJAG_04152":null,"SJAG_04167":null,"SJAG_04258":null,"SJAG_04277":null,"SJAG_04757":null,"SJAG_04955":null,"SJAG_05213":null,"SJAG_05294":null,"SJAG_05629":null,"SJAG_07006":null,"SJAG_07007":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"primary active transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["TC:3","EC:7.-.-.-"],"synonyms":[{"name":"primary active transporter","type":"related"}],"termid":"GO:0015399","terms_by_termid":{"GO:0004129":null,"GO:0005388":null,"GO:0008121":null,"GO:0008137":null,"GO:0008553":null,"GO:0008554":null,"GO:0008556":null,"GO:0008559":null,"GO:0008900":null,"GO:0015410":null,"GO:0015421":null,"GO:0015450":null,"GO:0015662":null,"GO:0019829":null,"GO:0042626":null,"GO:0043682":null,"GO:0044604":null,"GO:0046961":null,"GO:0140358":null,"GO:0140359":null,"GO:0140481":null,"GO:0140581":null,"GO:0140679":null}}


id: PBO:0053226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"legumain pseudogene 1","termid":"PBO:0053226"}


id: PBO:0084468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPKK involved in the protein kinase C signaling pathway; involved in control of cell integrity; upon activation by Bck1p phosphorylates downstream target, Slt2p; functionally redundant with Mkk2p; MKK1 has a paralog, MKK2, that arose from the whole genome duplication","termid":"PBO:0084468"}


id: PBO:0054700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2109","termid":"PBO:0054700"}


id: PATO:0002190
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A molecular quality that inheres in a molecular entity by virtue of the presence of a conjugated ring of unsaturated bonds, lone pairs, or empty orbitals that exhibit a stabilization stronger than would be expected by the stabilization of conjugation alone.","definition_xrefs":["PATOC:JH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aromaticity","termid":"PATO:0002190"}


id: PBO:0034122
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-surrounds","termid":"PBO:0034122"}


id: PBO:0076870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 16, pseudogene","termid":"PBO:0076870"}


id: GO:0009255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A pathway that converts a carbohydrate to pyruvate and glyceraldehyde-3 phosphate by producing 6-phosphogluconate and then dehydrating it.","definition_xrefs":["PMID:12981024","MetaCyc:PWY-8004","PMID:12921356","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glyceraldehyde-3-phosphate metabolic process","termid":"GO:0019682"},{"relation_name":"is_a","term_name":"Entner-Doudoroff pathway","termid":"GO:0061678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"Entner-Doudoroff pathway through 6-phosphogluconate","termid":"GO:0009255"}


id: GO:0120333
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The radial spoke of each group of radial spokes, whether grouped as triplets or doublets, that is most proximal to the base of the cilium. Radial spoke 1 (RS1), similarly to radial spoke 2, is comprised of four domains: 1) a very short base anchored to the A microtubule, 2) an elongaged stalk, 3) a bifurcated neck, and 4) an orthogonal head. The base of RS1 is connected to the tail of the inner dynein arm a/d.","definition_xrefs":["PMID:22754630","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radial spoke","termid":"GO:0001534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"radial spoke 1","synonyms":[{"name":"RS1","type":"related"}],"termid":"GO:0120333"}


id: GO:0016182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Budding of synaptic vesicles during the formation of constitutive recycling vesicles from early endosomes.","definition_xrefs":["PMID:24596248","GOC:curators","PMID:10099709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"},{"relation_name":"is_a","term_name":"synaptic vesicle budding","termid":"GO:0070142"},{"relation_name":"is_a","term_name":"vesicle-mediated transport in synapse","termid":"GO:0099003"},{"relation_name":"part_of","term_name":"synaptic vesicle recycling via endosome","termid":"GO:0036466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0061024","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"synaptic vesicle budding from endosome","synonyms":[{"name":"endosome to synaptic vesicle budding","type":"related"},{"name":"synaptic vesicle budding involved in synaptic vesicle exocytosis","type":"exact"}],"termid":"GO:0016182"}


id: GO:0071006
data:
  {"annotated_genes":["SJAG_04898","SJAG_01504","SJAG_04117","SJAG_04783","SJAG_01315"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91452,92904,96746,101818,113291],"is_not":false,"summary":null,"term":"GO:0071006"}]},"cv_name":"cellular_component","definition":"A spliceosomal complex that is formed by the displacement of the U1 and U4 snRNPs from the precatalytic spliceosome; the U2, U5 and U6 snRNPs remain associated with the mRNA. This complex, sometimes called the activated spliceosome, is the catalytically active form of the spliceosome, and includes many proteins in addition to those found in the U2, and U5 and U6 snRNPs.","definition_xrefs":["GOC:ab","GOC:krc","ISBN:0879695897","PMID:18322460","ISBN:0879697393","GOC:mah","PMID:19239890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U2-type spliceosomal complex","termid":"GO:0005684"},{"relation_name":"is_a","term_name":"catalytic step 1 spliceosome","termid":"GO:0071012"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01315":null,"SJAG_01504":null,"SJAG_04117":null,"SJAG_04783":null,"SJAG_04898":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"U2-type catalytic step 1 spliceosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GT-AG catalytic step 1 spliceosome","type":"narrow"},{"name":"U2-type activated spliceosome","type":"exact"},{"name":"major catalytic step 1 spliceosome","type":"exact"},{"name":"mammalian U2-type spliceosomal complex B*","type":"narrow"},{"name":"mammalian U2-type spliceosomal complex B2","type":"narrow"},{"name":"yeast U2-type spliceosomal complex A1","type":"narrow"}],"termid":"GO:0071006","terms_by_termid":{"GO:0071006":null}}


id: PBO:0047572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 23","termid":"PBO:0047572"}


id: GO:0046480
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 mono-beta-D-galactosyldiacylglycerol = alpha-D-galactosyl-beta-D-galactosyldiacylglycerol + 1,2-diacylglycerol.","definition_xrefs":["EC:2.4.1.184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosyltransferase activity","termid":"GO:0008378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"galactolipid galactosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-1226","RHEA:15921"],"synonyms":[{"name":"3-(beta-D-galactosyl)-1,2-diacyl-sn-glycerol:mono-3-(beta-D-galactosyl)-1,2-diacyl-sn-glycerol beta-D-galactosyltransferase activity","type":"related"},{"name":"DGDG synthase activity","type":"broad"},{"name":"GGGT activity","type":"related"},{"name":"digalactosyldiacylglycerol synthase activity","type":"broad"},{"name":"galactolipid-galactolipid galactosyltransferase activity","type":"related"},{"name":"galactolipid:galactolipid galactosyltransferase activity","type":"exact"},{"name":"interlipid galactosyltransferase activity","type":"related"}],"termid":"GO:0046480"}


id: PBO:0055758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA p53 regulated and ESC associated 2","termid":"PBO:0055758"}


id: GO:1905692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of an endoplasmic reticulum into its constituent components.","definition_xrefs":["GO_REF:0000079","GOC:autophagy","GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum organization","termid":"GO:0007029"},{"relation_name":"is_a","term_name":"organelle disassembly","termid":"GO:1903008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum disassembly","synonyms":[{"name":"ER disassembly","type":"exact"}],"termid":"GO:1905692"}


id: PBO:0002738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid family protease","termid":"PBO:0002738"}


id: RO:0002616
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"related_via_evidence_or_inference_to","termid":"RO:0002616"}


id: GO:0021585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the pons. This process pertains to the physical shaping of a rudimentary structure. The pons lies above the medulla and next to the cerebellum. The pons conveys information about movement from the cerebral hemisphere to the cerebellum.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","GOC:jid","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"hindbrain structural organization","termid":"GO:0021577"},{"relation_name":"part_of","term_name":"pons morphogenesis","termid":"GO:0021583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pons structural organization","synonyms":[{"name":"pons structural organisation","type":"exact"}],"termid":"GO:0021585"}


id: GO:0008086
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a voltage-gated channel that is activated in response to light. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity","termid":"GO:0005245"},{"relation_name":"is_a","term_name":"light-activated monoatomic ion channel activity","termid":"GO:0010461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"light-activated voltage-gated calcium channel activity","synonyms":[{"name":"light-activated voltage gated calcium channel activity","type":"exact"},{"name":"light-activated voltage-dependent calcium channel activity","type":"exact"}],"termid":"GO:0008086"}


id: PBO:0087893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription cofactor; forms complexes with Swi4p and Mbp1p to regulate transcription at the G1/S transition; involved in meiotic gene expression; also binds Stb1p to regulate transcription at START; cell wall stress induces phosphorylation by Mpk1p, which regulates Swi6p localization; required for the unfolded protein response, independently of its known transcriptional coactivators","termid":"PBO:0087893"}


id: GO:0033105
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The structure, composed of a monolayer of glycolipids with embedded proteins, that encloses the pigments and other contents of the chlorosome.","definition_xrefs":["PMID:14507718","PMID:14729689","PMID:17303128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle-enclosing lipid monolayer","termid":"GO:0034646"},{"relation_name":"part_of","term_name":"chlorosome","termid":"GO:0046858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"chlorosome envelope","synonyms":[{"name":"chlorosome membrane","type":"exact"}],"termid":"GO:0033105"}


id: GO:0035910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the ascending aorta are generated and organized. The ascending aorta is the portion of the aorta in a two-pass circulatory system that lies between the heart and the arch of aorta. In a two-pass circulatory system blood passes twice through the heart to supply the body once.","definition_xrefs":["UBERON:0001496","GOC:bf","GOC:dgh","MA:0002570","Wikipedia:Ascending_aorta"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"ascending aorta development","termid":"GO:0035905"},{"relation_name":"part_of","term_name":"aorta morphogenesis","termid":"GO:0035909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ascending aorta morphogenesis","termid":"GO:0035910"}


id: GO:0015113
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of nitrite (NO2-) ions from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"nitrite transmembrane transporter activity","synonyms":[{"name":"nitrite/nitrate porter activity","type":"related"}],"termid":"GO:0015113"}


id: GO:0034026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + an L-amino acid + an L-amino acid = ADP + phosphate + L-aminoacyl-L-amino acid.","definition_xrefs":["EC:6.3.2.49"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"L-amino-acid alpha-ligase activity","secondary_identifiers":["MetaCyc:RXN-16296","RHEA:44332"],"synonyms":[{"name":"L-amino acid alpha-ligase activity","type":"exact"},{"name":"L-amino acid ligase activity","type":"exact"},{"name":"YwfE","type":"related"},{"name":"bacilysin synthetase activity","type":"exact"}],"termid":"GO:0034026"}


id: GO:0045550
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the formation of phytyl group from the stepwise reduction of a geranylgeranyl group.","definition_xrefs":["PMID:9492312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"geranylgeranyl reductase activity","termid":"GO:0045550"}


id: PBO:0039035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with GTPase domain, ankyrin repeat and PH domain 12, pseudogene","termid":"PBO:0039035"}


id: PBO:0077046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THRAP3 pseudogene 1","termid":"PBO:0077046"}


id: SO:0002225
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A conserved sequence (5'-CGNMGATCNTY-3') transcription repressor binding site required for gene repression in the presence of high zinc.","direct_ancestors":[{"relation_name":"is_a","term_name":"zinc_repressed_element","termid":"SO:0002006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LOZ1_response_element","synonyms":[{"name":"LRE","type":"related"},{"name":"LRE element","type":"related"},{"name":"Loz1 response element","type":"related"}],"termid":"SO:0002225"}


id: MOD:01457
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to L-cysteine (not known as a natural, post-translational modification process).","definition_xrefs":["PubMed:18688235","PubMed:1849824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cysteine residue","termid":"MOD:00014"},{"relation_name":"is_a","term_name":"sulfur substitution for oxygen","termid":"MOD:00749"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteine (Ser)","synonyms":[{"name":"Cys(Ser)","type":"exact"}],"termid":"MOD:01457"}


id: GO:0047197
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-beta-hydroxysterol + triacylglycerol = a 3-beta-hydroxysterol ester + 1,2-diacylglycerol.","definition_xrefs":["MetaCyc:2.3.1.77-RXN","EC:2.3.1.77"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"triglyceride-sterol O-acyltransferase activity","secondary_identifiers":["RHEA:16897"],"synonyms":[{"name":"triacylglycerol-sterol O-acyltransferase activity","type":"exact"},{"name":"triacylglycerol:3beta-hydroxysterol O-acyltransferase activity","type":"related"},{"name":"triacylglycerol:sterol acyltransferase activity","type":"related"}],"termid":"GO:0047197"}


id: PBO:0086451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative membrane glycoprotein; has strong similarity to Vth1p and Pep1p/Vps10p; may be involved in vacuolar protein sorting","termid":"PBO:0086451"}


id: PBO:0044058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin S","termid":"PBO:0044058"}


id: GO:1905460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vascular associated smooth muscle cell apoptotic process.","definition_xrefs":["GOC:rph","GOC:TermGenie","GO_REF:0000058","PMID:26493107","GOC:BHF","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smooth muscle cell apoptotic process","termid":"GO:0034392"},{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell apoptotic process","termid":"GO:1905459"},{"relation_name":"negatively_regulates","term_name":"vascular associated smooth muscle cell apoptotic process","termid":"GO:1905288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vascular associated smooth muscle cell apoptotic process","synonyms":[{"name":"down regulation of VSMC apoptosis","type":"narrow"},{"name":"down regulation of VSMC apoptotic process","type":"exact"},{"name":"down regulation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"down regulation of vascular associated smooth muscle cell apoptotic process","type":"exact"},{"name":"down regulation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"down regulation of vascular smooth muscle cell apoptotic process","type":"exact"},{"name":"down-regulation of VSMC apoptosis","type":"narrow"},{"name":"down-regulation of VSMC apoptotic process","type":"exact"},{"name":"down-regulation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"down-regulation of vascular associated smooth muscle cell apoptotic process","type":"exact"},{"name":"down-regulation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"down-regulation of vascular smooth muscle cell apoptotic process","type":"exact"},{"name":"downregulation of VSMC apoptosis","type":"narrow"},{"name":"downregulation of VSMC apoptotic process","type":"exact"},{"name":"downregulation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"downregulation of vascular associated smooth muscle cell apoptotic process","type":"exact"},{"name":"downregulation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"downregulation of vascular smooth muscle cell apoptotic process","type":"exact"},{"name":"inhibition of VSMC apoptosis","type":"narrow"},{"name":"inhibition of VSMC apoptotic process","type":"narrow"},{"name":"inhibition of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"inhibition of vascular associated smooth muscle cell apoptotic process","type":"narrow"},{"name":"inhibition of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"inhibition of vascular smooth muscle cell apoptotic process","type":"narrow"},{"name":"negative regulation of VSMC apoptosis","type":"narrow"},{"name":"negative regulation of VSMC apoptotic process","type":"exact"},{"name":"negative regulation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"negative regulation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"negative regulation of vascular smooth muscle cell apoptotic process","type":"exact"}],"termid":"GO:1905460"}


id: GO:0032124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the macronucleus.","definition_xrefs":["GOC:jl","GOC:mah","GOC:dph","PMID:10503190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus organization","termid":"GO:0006997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macronucleus organization","synonyms":[{"name":"macronucleus organisation","type":"exact"},{"name":"macronuclear organization","type":"exact"},{"name":"macronuclear organization and biogenesis","type":"related"}],"termid":"GO:0032124"}


id: PBO:0026973
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitochondrial_RNA_level","termid":"PBO:0026973"}


id: FYPO:0000669
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a peptidase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal peptidase activity","termid":"FYPO:0000666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"abolished peptidase activity","synonyms":[{"name":"abolished protease activity","type":"exact"},{"name":"peptidase activity abolished","type":"exact"}],"termid":"FYPO:0000669"}


id: PBO:0025531
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbamoyl phosphate synthetase I deficiency","termid":"PBO:0025531"}


id: PBO:0076190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO1 pseudogene 5","termid":"PBO:0076190"}


id: PATO:0001154
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's length being notably higher than its width.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongated","termid":"PATO:0001154"}


id: PBO:0058535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6080","termid":"PBO:0058535"}


id: PBO:0043976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSAG family member 2","termid":"PBO:0043976"}


id: GO:0051377
data:
  {"annotated_genes":["SJAG_02488","SJAG_02523","SJAG_04165","SJAG_03506"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103601,108419,110853],"is_not":false,"summary":null,"term":"GO:0051377"},{"annotations":[84722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051267"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of ethanolamine phosphate to a mannose residue in the GPI lipid precursor.","definition_xrefs":["PMID:15632136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02488":null,"SJAG_02523":null,"SJAG_03506":null,"SJAG_04165":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016780","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"mannose-ethanolamine phosphotransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-162798"],"synonyms":[{"name":"EtN-P transferase activity","type":"exact"},{"name":"addition of ethanolamine phosphate to mannose of GPI precursor","type":"exact"},{"name":"ethanolamine phosphate transferase activity","type":"broad"},{"name":"phosphoethanolamine transferase activity","type":"broad"}],"termid":"GO:0051377","terms_by_termid":{"GO:0051267":null,"GO:0051377":null}}


id: PBO:0088532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP1 regulatory subunit Reg1","termid":"PBO:0088532"}


id: GO:1905939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gonad development.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:15342467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"gonad development","termid":"GO:0008406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of gonad development","synonyms":[{"name":"regulation of gonadogenesis","type":"exact"}],"termid":"GO:1905939"}


id: PBO:0014614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense RNA complementary to adh1, major transcript","termid":"PBO:0014614"}


id: PBO:0077765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM22 pseudogene 1","termid":"PBO:0077765"}


id: GO:0098009
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of the viral terminase complex that contains the translocase and endonuclease activities and allows the translocation of the phage DNA into the procapsid. The large subunit usually assembles as a heterooligomer with the small subunit.","definition_xrefs":["GOC:ch","PMID:18687036","GOC:jh2","GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"viral terminase complex","termid":"GO:0043493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"viral terminase, large subunit","synonyms":[{"name":"virus terminase, large subunit","type":"exact"}],"termid":"GO:0098009"}


id: GO:0051274
data:
  {"annotated_genes":["SJAG_02590","SJAG_00610","SJAG_00876","SJAG_01288","SJAG_01290","SJAG_04666","SJAG_04509","SJAG_01453","SJAG_01835","SJAG_01787","SJAG_04462","SJAG_03705","SJAG_04668","SJAG_02222","SJAG_02446","SJAG_03587","SJAG_04771","SJAG_00218","SJAG_04483","SJAG_05285","SJAG_03123","SJAG_04073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87643],"is_not":false,"summary":null,"term":"GO:0051274"},{"annotations":[98516,86653,90275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006078"},{"annotations":[90522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[105350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[111886,109227,87644,84140,105352,103830,87633,102146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[98702,104666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[88464],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0060635"},{"annotations":[83594,88468],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[83967],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032951"},{"annotations":[88453,88470,86830,98910,101390,113975],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-glucans.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan biosynthetic process","termid":"GO:0009250"},{"relation_name":"is_a","term_name":"beta-glucan metabolic process","termid":"GO:0051273"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01453":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_02446":null,"SJAG_02590":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04073":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"beta-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"beta-glucan anabolism","type":"exact"},{"name":"beta-glucan biosynthesis","type":"exact"},{"name":"beta-glucan formation","type":"exact"},{"name":"beta-glucan synthesis","type":"exact"}],"termid":"GO:0051274","terms_by_termid":{"GO:0006078":null,"GO:0032951":null,"GO:0034412":null,"GO:0034413":null,"GO:0051274":null,"GO:0060635":null,"GO:0070880":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: PBO:0058676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6804","termid":"PBO:0058676"}


id: GO:0106001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Uptake of hexoses, notably D-glucose, fructose, and galactose, into the blood by absorption from the small intestine.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal absorption","termid":"GO:0050892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal hexose absorption","termid":"GO:0106001"}


id: FYPO:0000239
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more MluI cell cycle box factor elements (MCBs) occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000294","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"increased transcription from MCB promoter","synonyms":[{"name":"expression of MBF target genes increased","type":"related"},{"name":"increased transcription from MCB promoter during mitotic cell cycle","type":"related"},{"name":"increased transcription from MCB promoter during vegetative growth","type":"exact"}],"termid":"FYPO:0000239"}


id: GO:0010810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell-substrate adhesion. Cell-substrate adhesion is the attachment of a cell to the underlying substrate via adhesion molecules.","definition_xrefs":["GOC:pf","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell adhesion","termid":"GO:0030155"},{"relation_name":"regulates","term_name":"cell-substrate adhesion","termid":"GO:0031589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of cell-substrate adhesion","termid":"GO:0010810"}


id: MOD:00798
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that can be regarded as effectively either one half of a cystine cross-link, or a cysteine residue with one hydrogen atom or proton removed.","definition_xrefs":["PubMed:1988019","PubMed:3083866","PubMed:2076469","PubMed:7918467","PubMed:366603","PubMed:8344916","Unimod:374","PubMed:2001356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"half cystine","synonyms":[{"name":"Dehydro","type":"related"},{"name":"Half of a disulfide bridge","type":"related"}],"termid":"MOD:00798"}


id: GO:0098827
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id: GO:1902006
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id: PBO:0040872
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id: PBO:0089514
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id: PBO:0090103
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id: MOD:00435
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id: GO:0007285
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id: PBO:0065606
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id: GO:0060817
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id: PBO:0005823
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id: PBO:0002843
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id: PBO:0052462
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id: PBO:0047346
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id: GO:0021948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a deep nuclear neuron from the rostrodorsal region of the cerebellar plate to their final more ventral position.","definition_xrefs":["GOC:dph","GOC:cls","GOC:jid","PMID:15157725","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron migration","termid":"GO:0001764"},{"relation_name":"is_a","term_name":"cell migration in hindbrain","termid":"GO:0021535"},{"relation_name":"part_of","term_name":"deep nuclear neuron cell migration","termid":"GO:0021946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inward migration of deep nuclear neurons","termid":"GO:0021948"}


id: PBO:0089512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial omega-amidase","termid":"PBO:0089512"}


id: GO:1900423
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A positive regulation of transcription from RNA polymerase II promoter that results in positive regulation of mating type switching.","definition_xrefs":["GOC:TermGenie","PMID:8804308"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of mating type switching by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900423)","synonyms":[{"name":"activation of mating type switching by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"stimulation of mating type switching by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up regulation of mating type switching by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of mating type switching by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of mating type switching by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900423"}


id: PBO:0049737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin subunit alpha pseudogene 1","termid":"PBO:0049737"}


id: PATO:0000978
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000978 relative permeability value (obsolete PATO:0000978)","termid":"PATO:0000978"}


id: GO:0030711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of border cell delamination.","definition_xrefs":["PMID:10822261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of border follicle cell delamination","termid":"GO:0030710"},{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"positively_regulates","term_name":"border follicle cell delamination","termid":"GO:0030709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of border follicle cell delamination","synonyms":[{"name":"activation of border follicle cell delamination","type":"narrow"},{"name":"positive regulation of border cell delamination","type":"broad"},{"name":"stimulation of border follicle cell delamination","type":"narrow"},{"name":"up regulation of border follicle cell delamination","type":"exact"},{"name":"up-regulation of border follicle cell delamination","type":"exact"},{"name":"upregulation of border follicle cell delamination","type":"exact"}],"termid":"GO:0030711"}


id: PBO:0075136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide A","termid":"PBO:0075136"}


id: PBO:0047753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyltransferase, CAAX box, beta","termid":"PBO:0047753"}


id: PR:O14192
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC56E4.03 gene.","definition_xrefs":["UniProtKB:O14192","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aromatic amino acid aminotransferase C56E4.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56E4.03","synonyms":[{"name":"Spom972h-SPAC56E4.03","type":"exact"}],"termid":"PR:O14192"}


id: PBO:0057451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR570 host gene","termid":"PBO:0057451"}


id: GO:0086038
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + Na+(out) = Ca2+(out) + Na+(in), which contributes to regulating the membrane potential of a cardiac muscle cell.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium:sodium antiporter activity","termid":"GO:0005432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"calcium:sodium antiporter activity involved in regulation of cardiac muscle cell membrane potential","termid":"GO:0086038"}


id: PBO:0076489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TARDBP pseudogene 4","termid":"PBO:0076489"}


id: GO:1903681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epithelial cell-cell adhesion involved in epithelium migration.","definition_xrefs":["GOC:TermGenie","PMID:18394891","GO_REF:0000058","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion","termid":"GO:0022407"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"epithelial cell-cell adhesion involved in epithelium migration","termid":"GO:0090137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of epithelial cell-cell adhesion involved in epithelium migration","termid":"GO:1903681"}


id: GO:1905441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chondroitin 4'-sulfate stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:22365850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to chondroitin 4'-sulfate","termid":"GO:1905441"}


id: PBO:0055855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDL receptor related protein 3","termid":"PBO:0055855"}


id: PBO:0082702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the meiotic outer plaque of the spindle pole body; involved in modifying the meiotic outer plaque that is required prior to prospore membrane formation","termid":"PBO:0082702"}


id: GO:0004567
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal, non-reducing beta-D-mannose residues in beta-D-mannosides.","definition_xrefs":["EC:3.2.1.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosidase activity","termid":"GO:0015923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"beta-mannosidase activity","secondary_identifiers":["MetaCyc:3.2.1.25-RXN","Reactome:R-HSA-8853710"],"synonyms":[{"name":"beta-D-mannosidase activity","type":"related"},{"name":"beta-D-mannoside mannohydrolase activity","type":"related"},{"name":"beta-mannoside mannohydrolase activity","type":"related"},{"name":"exo-beta-D-mannanase activity","type":"related"},{"name":"mannanase activity","type":"related"},{"name":"mannase activity","type":"related"}],"termid":"GO:0004567"}


id: GO:1903653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Modulation of host cell motility by a symbiont of that host.","definition_xrefs":["GO_REF:0000063","PMID:25049409","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"},{"relation_name":"regulates","term_name":"cell motility","termid":"GO:0048870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation by symbiont of host cell motility","synonyms":[{"name":"modulation by symbiont of host cell locomotion","type":"exact"},{"name":"modulation by symbiont of host cell movement","type":"related"},{"name":"regulation by symbiont of host cell motility","type":"exact"}],"termid":"GO:1903653"}


id: PBO:0067282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 363, pseudogene","termid":"PBO:0067282"}


id: SO:0001370
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_carboxymethylaminomethyl_2_prime_O_methyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_carboxymethylaminomethyl_two_prime_O_methyluridine","secondary_identifiers":["RNAMOD:078"],"synonyms":[{"name":"5-carboxymethylaminomethyl- 2'-O-methyluridine","type":"exact"},{"name":"cmnm5Um","type":"exact"},{"name":"five carboxymethylaminomethyl two prime O methyluridine","type":"exact"}],"termid":"SO:0001370"}


id: GO:0061448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a connective tissue over time, from its formation to the mature structure.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"connective tissue development","termid":"GO:0061448"}


id: GO:1903567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to ciliary membrane.","definition_xrefs":["GO_REF:0000058","GOC:cilia","PMID:22072986","GOC:krc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cilium","termid":"GO:1903564"},{"relation_name":"is_a","term_name":"regulation of protein localization to cell periphery","termid":"GO:1904375"},{"relation_name":"is_a","term_name":"regulation of protein localization to membrane","termid":"GO:1905475"},{"relation_name":"regulates","term_name":"protein localization to ciliary membrane","termid":"GO:1903441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to ciliary membrane","synonyms":[{"name":"regulation of protein localisation in ciliary membrane","type":"exact"},{"name":"regulation of protein localisation to ciliary membrane","type":"exact"},{"name":"regulation of protein localization in ciliary membrane","type":"exact"}],"termid":"GO:1903567"}


id: PBO:0047476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl diphosphate synthase pseudogene 3","termid":"PBO:0047476"}


id: PBO:0079354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha 1b","termid":"PBO:0079354"}


id: PR:000027533
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcriptional regulator prz1 phosphorylated 1 in Schizosaccharomyces pombe. Example: UniProtKB:Q09838-1, MOD:00696.","definition_xrefs":["PMID:12637524","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional regulator prz1","termid":"PR:000027513"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prz1/PhosRes+","pombase_gene_id":"SPAC4G8.13c","synonyms":[{"name":"PomBase_original_PRO_term_name: transcriptional regulator prz1 isoform 1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-prz1/iso:1/Phos:1","type":"exact"},{"name":"prz1/PhosRes+","type":"exact"}],"termid":"PR:000027533"}


id: PBO:0057167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 320d-1","termid":"PBO:0057167"}


id: PBO:0083469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene PET130","termid":"PBO:0083469"}


id: MOD:01812
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to 5x(13)C,1x(15)N labeled L-methionine sulfoxide.","definition_xrefs":["PubMed:12771378","Unimod:268#M"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine sulfoxide","termid":"MOD:00719"},{"relation_name":"is_a","term_name":"5x(13)C,1x(15)N labeled residue","termid":"MOD:01809"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5x(13)C,1x(15)N labeled L-methionine sulfoxide","synonyms":[{"name":"13C(5) 15N(1) Silac label","type":"related"},{"name":"Label:13C(5)15N(1)","type":"related"}],"termid":"MOD:01812"}


id: PBO:0043044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine and histidine rich domain containing 1","termid":"PBO:0043044"}


id: GO:0100045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates arginine catabolic process.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of arginine catabolic process by transcription from RNA polymerase II promoter (obsolete GO:0100045)","termid":"GO:0100045"}


id: PBO:0005115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn8 (predicted)","termid":"PBO:0005115"}


id: PBO:0063523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDYN antisense RNA 1","termid":"PBO:0063523"}


id: SO:0001593
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which causes a disruption of the translational reading frame, by shifting two bases forward.","direct_ancestors":[{"relation_name":"is_a","term_name":"frameshift_variant","termid":"SO:0001589"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minus_2_frameshift_variant","synonyms":[{"name":"-2 frameshift variant","type":"exact"},{"name":"minus 2 frameshift variant","type":"exact"}],"termid":"SO:0001593"}


id: PBO:0054065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1412","termid":"PBO:0054065"}


id: PBO:0077351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 91","termid":"PBO:0077351"}


id: GO:0001119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acquisition, loss, or modification of macromolecules within a protein-DNA-RNA complex, resulting in the alteration of an existing complex.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA-RNA complex organization","termid":"GO:0001115"},{"relation_name":"is_a","term_name":"protein-containing complex remodeling","termid":"GO:0034367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-DNA-RNA complex remodeling","termid":"GO:0001119"}


id: GO:0090210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the establishment of the blood-brain barrier, a selectively permeable structural and functional barrier that exists between the capillaries and the brain.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"regulates","term_name":"establishment of blood-brain barrier","termid":"GO:0060856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of establishment of blood-brain barrier","synonyms":[{"name":"regulation of establishment of BBB","type":"exact"}],"termid":"GO:0090210"}


id: PBO:0068402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 220","termid":"PBO:0068402"}


id: PBO:0044399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 60, pseudogene","termid":"PBO:0044399"}


id: GO:1904041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cystathionine beta-synthase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","GOC:hal","GOC:BHF","PMID:24416422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lyase activity","termid":"GO:0051339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cystathionine beta-synthase activity","synonyms":[{"name":"regulation of L-serine hydro-lyase (adding homocysteine)","type":"exact"},{"name":"regulation of L-serine hydro-lyase (adding homocysteine; L-cystathionine-forming)","type":"exact"},{"name":"regulation of beta-thionase activity","type":"exact"},{"name":"regulation of methylcysteine synthase activity","type":"exact"},{"name":"regulation of serine sulfhydrase activity","type":"exact"},{"name":"regulation of serine sulfhydrylase activity","type":"exact"}],"termid":"GO:1904041"}


id: SO:0000603
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Group II introns are found in rRNA, tRNA and mRNA of organelles in fungi, plants and protists, and also in mRNA in bacteria. They are large self-splicing ribozymes and have 6 structural domains (usually designated dI to dVI). A subset of group II introns also encode essential splicing proteins in intronic ORFs. The length of these introns can therefore be up to 3kb. Splicing occurs in almost identical fashion to nuclear pre-mRNA splicing with two transesterification steps. The 2' hydroxyl of a bulged adenosine in domain VI attacks the 5' splice site, followed by nucleophilic attack on the 3' splice site by the 3' OH of the upstream exon. Protein machinery is required for splicing in vivo, and long range intron to intron and intron-exon interactions are important for splice site positioning. Group II introns are further sub-classified into groups IIA and IIB which differ in splice site consensus, distance of bulged A from 3' splice site, some tertiary interactions, and intronic ORF phylogeny.","direct_ancestors":[{"relation_name":"is_a","term_name":"autocatalytically_spliced_intron","termid":"SO:0000588"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"group_II_intron","secondary_identifiers":["http://en.wikipedia.org/wiki/Group_II_intron"],"synonyms":[{"name":"group II intron","type":"exact"}],"termid":"SO:0000603"}


id: SO:0000751
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The location of DNA that has come from a viral origin.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_location","termid":"SO:0000735"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proviral_location","synonyms":[{"name":"proviral location","type":"exact"}],"termid":"SO:0000751"}


id: PBO:0073630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 15","termid":"PBO:0073630"}


id: PBO:0058271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4649","termid":"PBO:0058271"}


id: PBO:0089276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin-dependent protein kinase Pho85/PhoA-like Pef1","termid":"PBO:0089276"}


id: GO:0061204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation or disassembly of a filament composed of paramyosin molecules.","definition_xrefs":["GOC:dph","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin cytoskeleton organization","termid":"GO:0030036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"paramyosin filament assembly or disassembly","termid":"GO:0061204"}


id: PR:O13890
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UPF0061 protein YdiU that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0061 protein C20G4.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G4.05c","secondary_identifiers":["UniProtKB:O13890"],"synonyms":[{"name":"Spom972h-ydiU","type":"exact"}],"termid":"PR:O13890"}


id: PBO:0059618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 30","termid":"PBO:0059618"}


id: GO:0014742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of muscle hypertrophy.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle hypertrophy","termid":"GO:0014743"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"muscle hypertrophy","termid":"GO:0014896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of muscle hypertrophy","termid":"GO:0014742"}


id: PBO:0043970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRYZL2P-SEC16B readthrough","termid":"PBO:0043970"}


id: GO:0150053
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse of a climbing fiber onto the dendrites of a Purkinje cell in cerebellum. The climbing fiber originates from the inferior olivary nucleus of the medulla oblongata.","definition_xrefs":["PMID:23811844","GOC:bc","PMID:19597563","GOC:aruk","PMID:5044254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric, glutamatergic, excitatory synapse","termid":"GO:0098985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cerebellar climbing fiber to Purkinje cell synapse","synonyms":[{"name":"cerebellar climbing fibre to Purkinje cell synapse","type":"exact"}],"termid":"GO:0150053"}


id: PBO:0002206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PI31 proteasome inhibitor (predicted)","termid":"PBO:0002206"}


id: PBO:0071754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P1 pseudogene 1","termid":"PBO:0071754"}


id: SO:0001339
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N2_N2_7_trimethylguanosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N2_N2_7_trimethylguanosine","secondary_identifiers":["RNAMOD:091"],"synonyms":[{"name":"N2,N2,7-trimethylguanosine","type":"exact"},{"name":"m2,2,7G","type":"exact"}],"termid":"SO:0001339"}


id: PBO:0062422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 83 pseudogene","termid":"PBO:0062422"}


id: MOD:01143
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between two cysteine residues and the tetrapyrrole compound 15,16-dihydrobiliverdin.","definition_xrefs":["PubMed:8420941","PubMed:1559975","PubMed:3208761","RESID:AA0429","PubMed:2222853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole modified residue","termid":"MOD:00700"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"15,16-dihydrobiliverdin-bis-L-cysteine","synonyms":[{"name":"(16R)-8,12-bis(2-carboxyethyl)-3-[2-(((2R)-2-amino-2-carboxy)ethylsulfanyl)ethyl]-18-[(1Xi)-1-(((2R)-2-amino-2-carboxy)ethylsulfanyl)ethyl]-2,7,13,17-tetramethyl-15,16-dihydrobilin-1,19(21H,24H)-dione","type":"exact"},{"name":"15,16-Dhbv","type":"exact"},{"name":"15,16-dihydrobiliverdin IXalpha","type":"exact"},{"name":"15,16-dihydrobiliverdin cysteine adduct","type":"exact"},{"name":"15,16-dihydrobiliverdin-bis-L-cysteine","type":"exact"},{"name":"3'',18'-biscysteinyl-15,16-dihydrobiliverdin","type":"exact"},{"name":"3beta,18alpha-biscysteinyl-15,16-dihydrobiliverdin","type":"exact"},{"name":"8,12-bis(2-carboxyethyl)-3-(2-(cysteinyl-S)-ethyl)-18-(1-(cysteinyl-S)-ethyl)-2,7,13,17-tetramethylbiladiene-ab-1,19(16H,21H)-dione","type":"exact"},{"name":"BINDING  15,16-dihydrobiliverdin (covalent; via 2 links)","type":"exact"},{"name":"DBV","type":"exact"}],"termid":"MOD:01143"}


id: GO:1900361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of pentasaccharide transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of pentasaccharide transport","termid":"GO:1900360"},{"relation_name":"negatively_regulates","term_name":"pentasaccharide transport","termid":"GO:2001100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of pentasaccharide transport","synonyms":[{"name":"down regulation of pentasaccharide transport","type":"exact"},{"name":"down-regulation of pentasaccharide transport","type":"exact"},{"name":"downregulation of pentasaccharide transport","type":"exact"},{"name":"inhibition of pentasaccharide transport","type":"narrow"}],"termid":"GO:1900361"}


id: PBO:0017947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supeoxide dismutase, mitochondrial ribosomal protein subunit (predicted)","termid":"PBO:0017947"}


id: GO:0045234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a palmitoleyl group to a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein lipidation","termid":"GO:0006497"},{"relation_name":"is_a","term_name":"protein acylation","termid":"GO:0043543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042158"}],"interesting_parent_ids":["GO:0008150","GO:0042158"],"is_obsolete":false,"name":"protein palmitoleylation","secondary_identifiers":["GO:0045235"],"synonyms":[{"name":"protein amino acid palmitoleylation","type":"exact"}],"termid":"GO:0045234"}


id: PBO:0062567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily AF member 1 pseudogene","termid":"PBO:0062567"}


id: MOD:00137
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue into L-3-phenyllactic acid.","definition_xrefs":["Unimod:7#F","PubMed:1973541","RESID:AA0128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-phenylalanine residue","termid":"MOD:00914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-3-phenyllactic acid","synonyms":[{"name":"(2S)-2-hydroxy-3-phenylpropanoic acid","type":"exact"},{"name":"Deamidated","type":"related"},{"name":"Deamidation","type":"related"},{"name":"L-3-phenyllactic acid","type":"exact"},{"name":"MOD_RES 3-phenyllactic acid","type":"exact"}],"termid":"MOD:00137"}


id: PBO:0087530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of NuA4 histone H4 acetyltransferase and SWR1 complexes; may function to antagonize silencing near telomeres; interacts directly with Swc4p; has homology to human leukemogenic protein AF9; contains a YEATS domain","termid":"PBO:0087530"}


id: PBO:0000556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-dependent diflavin oxidoreductase, involved in iron-sulphur cluster assembly Tah18 (predicted)","termid":"PBO:0000556"}


id: PBO:0059584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylthioadenosine phosphorylase pseudogene 1","termid":"PBO:0059584"}


id: GO:0045626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of T-helper 1 cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T-helper 1 type immune response","termid":"GO:0002826"},{"relation_name":"is_a","term_name":"negative regulation of T-helper cell differentiation","termid":"GO:0045623"},{"relation_name":"is_a","term_name":"regulation of T-helper 1 cell differentiation","termid":"GO:0045625"},{"relation_name":"negatively_regulates","term_name":"T-helper 1 cell differentiation","termid":"GO:0045063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of T-helper 1 cell differentiation","synonyms":[{"name":"down regulation of T-helper 1 cell differentiation","type":"exact"},{"name":"down-regulation of T-helper 1 cell differentiation","type":"exact"},{"name":"downregulation of T-helper 1 cell differentiation","type":"exact"},{"name":"inhibition of T-helper 1 cell differentiation","type":"narrow"},{"name":"negative regulation of T-helper 1 cell development","type":"related"}],"termid":"GO:0045626"}


id: PBO:0030918
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cortex_morphology_during_vegetative_growth","termid":"PBO:0030918"}


id: PBO:0085257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripheral membrane protein required for COPI vesicle fusion to the ER; mediates Sey1p-independent homotypic ER fusion; prohibits back-fusion of COPII vesicles with the ER; forms a tethering complex with Sec39p and Dsl1p that interacts with ER SNAREs Sec20p and Use1p","termid":"PBO:0085257"}


id: PR:O60110
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ER membrane protein complex subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03191","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat protein oca3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15C4.01c","secondary_identifiers":["UniProtKB:O60110"],"synonyms":[{"name":"Spom972h-EMC2","type":"exact"},{"name":"overexpression-mediated cell cycle arrest protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60110"}


id: PBO:0046984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member H, pseudogene","termid":"PBO:0046984"}


id: PBO:0046734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EWS RNA binding protein 1","termid":"PBO:0046734"}


id: PBO:0040231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 4 pseudogene 3","termid":"PBO:0040231"}


id: GO:0007475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The coming together of the dorsal and ventral surfaces of the imaginal disc-derived wing during the conversion of a folded single layered wing disc to a flat bilayered wing.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing margin morphogenesis","termid":"GO:0008587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apposition of dorsal and ventral imaginal disc-derived wing surfaces","synonyms":[{"name":"apposition of dorsal and ventral wing surfaces","type":"exact"}],"termid":"GO:0007475"}


id: GO:0003865
data:
  {"annotated_genes":["SJAG_02291","SJAG_04954"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61014,96725],"is_not":false,"summary":null,"term":"GO:0003865"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-oxo-5-alpha-steroid + acceptor = a 3-oxo-delta(4)-steroid + reduced acceptor.","definition_xrefs":["EC:1.3.99.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-CH group of donors","termid":"GO:0033765"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02291":null,"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"3-oxo-5-alpha-steroid 4-dehydrogenase activity","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["RHEA:13805","Reactome:R-HSA-469659","MetaCyc:RXN-13682","Reactome:R-HSA-9705713","Reactome:R-HSA-9705714"],"synonyms":[{"name":"3-keto-delta4-steroid-5alpha-reductase activity","type":"related"},{"name":"3-oxo-5alpha-steroid 4-dehydrogenase activity","type":"related"},{"name":"3-oxo-5alpha-steroid delta4-dehydrogenase activity","type":"related"},{"name":"3-oxo-5alpha-steroid:(acceptor) delta4-oxidoreductase activity","type":"related"},{"name":"3-oxo-5alpha-steroid:acceptor delta4-oxidoreductase activity","type":"related"},{"name":"3-oxosteroid delta4-dehydrogenase","type":"broad"},{"name":"4-ene-3-ketosteroid-5alpha-oxidoreductase activity","type":"related"},{"name":"5alpha-reductase","type":"broad"},{"name":"delta4-3-keto steroid 5alpha-reductase activity","type":"related"},{"name":"delta4-3-ketosteroid5alpha-oxidoreductase activity","type":"related"},{"name":"delta4-3-oxo steroid reductase activity","type":"related"},{"name":"delta4-3-oxosteroid-5alpha-reductase","type":"broad"},{"name":"delta4-5alpha-dehydrogenase activity","type":"related"},{"name":"steroid 5 alpha reductase","type":"broad"},{"name":"steroid 5-alpha-reductase activity","type":"broad"},{"name":"steroid 5alpha-reductase","type":"broad"},{"name":"steroid delta4-5alpha-reductase activity","type":"related"},{"name":"testosterone 5alpha-reductase","type":"broad"}],"termid":"GO:0003865","terms_by_termid":{"GO:0003865":null}}


id: GO:0005686
data:
  {"annotated_genes":["SJAG_04079","SJAG_03995","SJAG_01819","SJAG_01327","SJAG_03460","SJAG_00504","SJAG_00313","SJAG_00322","SJAG_02304","SJAG_03469","SJAG_01452","SJAG_01008","SJAG_05208","SJAG_00539","SJAG_00577","SJAG_02843","SJAG_01870","SJAG_03547","SJAG_02469","SJAG_00147","SJAG_05240","SJAG_04318","SJAG_00498","SJAG_03954","SJAG_03070","SJAG_02279","SJAG_03210","SJAG_03245","SJAG_01301","SJAG_02185"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89096,89424,90226,90979,91238,91395,91663,91884,92395,97796,98476,98605,98706,99265,101562,101916,102387,102482,102808,103938,104586,105550,106115,106682,108508,108712,108943,110997,111933,112477],"is_not":false,"summary":null,"term":"GO:0005686"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains small nuclear RNA U2, a heptameric ring of Sm proteins, as well as several proteins that are unique to the U2 snRNP, most of which remain associated with the U2 snRNA both while the U2 snRNP is free or assembled into a series of spliceosomal complexes.","definition_xrefs":["GOC:mah","ISBN:0879695897","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00147":null,"SJAG_00313":null,"SJAG_00322":null,"SJAG_00498":null,"SJAG_00504":null,"SJAG_00539":null,"SJAG_00577":null,"SJAG_01008":null,"SJAG_01301":null,"SJAG_01327":null,"SJAG_01452":null,"SJAG_01819":null,"SJAG_01870":null,"SJAG_02185":null,"SJAG_02279":null,"SJAG_02304":null,"SJAG_02469":null,"SJAG_02843":null,"SJAG_03070":null,"SJAG_03210":null,"SJAG_03245":null,"SJAG_03460":null,"SJAG_03469":null,"SJAG_03547":null,"SJAG_03954":null,"SJAG_03995":null,"SJAG_04079":null,"SJAG_04318":null,"SJAG_05208":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"U2 snRNP","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"17S U2 snRNP","type":"narrow"},{"name":"snRNP U2","type":"exact"}],"termid":"GO:0005686","terms_by_termid":{"GO:0005686":null}}


id: PBO:0016885
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific","termid":"PBO:0016885"}


id: FYPO:0003611
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during one or both meiotic nuclear divisions is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level","termid":"FYPO:0000836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased protein level during meiosis","synonyms":[{"name":"increased protein accumulation during meiosis","type":"related"},{"name":"increased protein level during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003611"}


id: PBO:0042354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD96 molecule","termid":"PBO:0042354"}


id: PBO:0034494
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H2B-K119_ubiquitination_at_double-strand_break_site","termid":"PBO:0034494"}


id: PR:O59709
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- git7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-insensitive transcription protein 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36.12c","synonyms":[{"name":"Spom972h-git7","type":"exact"}],"termid":"PR:O59709"}


id: PBO:0048643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein beta 3","termid":"PBO:0048643"}


id: GO:0010862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate, frequency or extent of pathway-restricted SMAD protein phosphorylation. Pathway-restricted SMAD proteins and common-partner SMAD proteins are involved in the transforming growth factor beta receptor signaling pathways.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of pathway-restricted SMAD protein phosphorylation (obsolete GO:0010862)","termid":"GO:0010862"}


id: PATO:0001852
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being out of its usual or proper place, or position.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"displaced","termid":"PATO:0002181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dislocated","secondary_identifiers":["PATO:0001479","PATO:0002158","PATO:0002159"],"synonyms":[{"name":"dislocation","type":"exact"},{"name":"luxated","type":"exact"},{"name":"luxation","type":"exact"},{"name":"relational dislocated quality","type":"exact"}],"termid":"PATO:0001852"}


id: PBO:0074141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member B1","termid":"PBO:0074141"}


id: GO:0018046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-methionine amide by hydrolysis and oxidation of an interior Met-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0093"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-methionine amidation (obsolete GO:0018046)","termid":"GO:0018046"}


id: FYPO:0005957
data:
  {"alleles_by_uniquename":{"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115351],"is_not":false,"summary":null,"term":"FYPO:0005957"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dephosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal.","definition_xrefs":["GO:0006470","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein dephosphorylation during vegetative growth","termid":"FYPO:0005956"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02763":null,"SJAG_03940":null},"genotype_count":1,"genotypes_by_uniquename":{"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0005447","FYPO:0002494","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein dephosphorylation during vegetative growth","references_by_uniquename":{"PMID:26774782":null},"single_locus_annotated_genes":["SJAG_03940"],"single_locus_genotype_uniquenames":["nem2delta"],"synonyms":[{"name":"decreased protein dephosphorylation during mitotic cell cycle","type":"related"},{"name":"reduced protein dephosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005957","terms_by_termid":{"FYPO:0005957":null,"FYPO_EXT:0000001":null}}


id: GO:0010405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a cell wall arabinogalactan II glycoprotein, which is composed of a group of core protein of highly varying length and domain complexity. These are O-glycosylated at one or more hydroxyproline residues by arabinogalactan (AG) type II groups, which consist of (1->3)-beta-galactan and (1->6)-beta-linked galactan chains connected to each other by (1->3,1->6)-linked branch points, O-3 and O-6 positions substituted with terminal arabinosyl residues. Also, rhamnose, fucose, glucuronic and galacturonic acid can be present in the glycan structures.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall hydroxyproline-rich glycoprotein metabolic process","termid":"GO:0010404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"arabinogalactan protein metabolic process","synonyms":[{"name":"arabinogalactan protein metabolism","type":"exact"}],"termid":"GO:0010405"}


id: PATO:0000205
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000205 relative locomotor_activity (obsolete PATO:0000205)","termid":"PATO:0000205"}


id: GO:2000642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of early endosome to late endosome transport.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"regulation of early endosome to late endosome transport","termid":"GO:2000641"},{"relation_name":"negatively_regulates","term_name":"early endosome to late endosome transport","termid":"GO:0045022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"negative regulation of early endosome to late endosome transport","termid":"GO:2000642"}


id: PBO:0078817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon AGG) 1-1","termid":"PBO:0078817"}


id: GO:1901298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hydrogen peroxide-mediated programmed cell death.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed cell death","termid":"GO:0043067"},{"relation_name":"regulates","term_name":"hydrogen peroxide-mediated programmed cell death","termid":"GO:0010421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hydrogen peroxide-mediated programmed cell death","termid":"GO:1901298"}


id: PBO:0057591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 920","termid":"PBO:0057591"}


id: PBO:0048241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 12B","termid":"PBO:0048241"}


id: PATO:0001325
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A symmetry quality inhering in a bearer by virtue of the bearer's having equal proportion around a central point or axis.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symmetry","termid":"PATO:0000965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radial symmetry","termid":"PATO:0001325"}


id: FYPO:0002569
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of dCTP measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular dCTP level","synonyms":[{"name":"increased cellular dCTP level during mitotic cell cycle","type":"related"},{"name":"increased cellular dCTP level during vegetative growth","type":"exact"},{"name":"increased dCTP accumulation","type":"related"}],"termid":"FYPO:0002569"}


id: GO:0120327
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A telopode is a plasma membrane bounded cell projection that is present on a telocyte and is tens to hundreds of microns long. Telopodes form a labyrinthine system communicating through gap junctions.","definition_xrefs":["GOC:krc","MESH:D000067617","PMID:20367664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"telopode","termid":"GO:0120327"}


id: RO:0000302
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation that holds between a neuron that is synapsed_to another neuron or a neuron that is connected indirectly to another by a chain of neurons, each synapsed_to the next.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_neural_circuit_with","termid":"RO:0000300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"downstream_in_neural_circuit_with","termid":"RO:0000302"}


id: PBO:0064386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 8","termid":"PBO:0064386"}


id: GO:0141161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cAMP/PKA signal transduction.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"cAMP/PKA signal transduction","termid":"GO:0141156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of cAMP/PKA signal transduction","synonyms":[{"name":"regulation of cAMP/PKA signaling","type":"exact"}],"termid":"GO:0141161"}


id: GO:0141140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts the normal execution of the immunoglobulin-mediated immune response of the host organism. One common mechanism by which this happens is the direct inhibition of immunoglobulin activity, by direct binding or modification. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:18426869","PMID:22256861","PMID:24753590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host immune response","termid":"GO:0052562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host immunoglobulin-mediated immune response","synonyms":[{"name":"symbiont-mediated suppression of host immunoglobulin activity","type":"related"}],"termid":"GO:0141140"}


id: PBO:0111948
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo Sfi1 Interactor","termid":"PBO:0111948"}


id: PBO:0066344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of chromosome condensation 2 pseudogene 6","termid":"PBO:0066344"}


id: GO:0010043
data:
  {"annotated_genes":["SJAG_01078","SJAG_01803"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89824,89823],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010312"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a zinc ion stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01078":null,"SJAG_01803":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to zinc ion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to zinc","type":"exact"}],"termid":"GO:0010043","terms_by_termid":{"GO:0010312":null}}


id: PBO:0004127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Usp (universal stress protein) family protein","termid":"PBO:0004127"}


id: MOD:00331
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts four L-cysteine residues and a three-iron four-sulfur cluster to tetrakis-L-cysteinyl triiron tetrasulfide.","definition_xrefs":["PubMed:6094558","RESID:AA0326","PubMed:11592901","PubMed:2511202","PubMed:11941493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetrakis-L-cysteinyl triiron tetrasulfide","synonyms":[{"name":"bis[bis-L-cysteinyl iron disulfido]iron","type":"exact"},{"name":"di-mu-1:2kappaS-sulfido di-mu-2:3kappaS-sulfido iron bis(bis-S-cysteinyliron)","type":"exact"},{"name":"tetra-mu-sulfido tetrakis-S-L-cysteinyl triiron","type":"exact"},{"name":"tetrakis-L-cysteinyl linear [3Fe-4S] cluster","type":"exact"},{"name":"tetrakis-L-cysteinyl triiron tetrasulfide","type":"exact"},{"name":"tetrakis-L-cysteinyl triiron tetrasulfide D2 cluster","type":"exact"}],"termid":"MOD:00331"}


id: PBO:0091781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dubious protein, reverse strand of sno20","termid":"PBO:0091781"}


id: PBO:0071312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 35","termid":"PBO:0071312"}


id: GO:0102911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (-)-secoisolariciresinol + NAD = H+ + (-)-lactol + NADH.","definition_xrefs":["EC:1.1.1.331","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"(-)-secoisolariciresinol dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-8680"],"termid":"GO:0102911"}


id: GO:1902618
data:
  {"annotated_genes":["SJAG_01973"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96876,109803],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140114"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fluoride stimulus.","definition_xrefs":["GOC:TermGenie","PMID:8138152","GOC:kmv","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to fluoride","termid":"GO:1902617"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01973":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to fluoride","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902618","terms_by_termid":{"GO:0140114":null}}


id: PBO:0086577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; deletion confers reduced fitness in saline","termid":"PBO:0086577"}


id: PBO:0053973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1284","termid":"PBO:0053973"}


id: PBO:0089899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial serine-tRNA ligase","termid":"PBO:0089899"}


id: PBO:0067068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 96, pseudogene","termid":"PBO:0067068"}


id: PBO:0077233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domain family 1","termid":"PBO:0077233"}


id: PBO:0039985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 6","termid":"PBO:0039985"}


id: PBO:0110486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHF10 pseudogene 2","termid":"PBO:0110486"}


id: SO:0001899
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repeat region which is part of the regional centromere outer repeat region.","definition_xrefs":["PMID:16407326","SO:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"centromeric_repeat","termid":"SO:0001797"},{"relation_name":"part_of","term_name":"regional_centromere_outer_repeat_region","termid":"SO:0001799"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dh_repeat","synonyms":[{"name":"dh repeat","type":"exact"}],"termid":"SO:0001899"}


id: PBO:0017700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell polarity protein Spa2","termid":"PBO:0017700"}


id: PBO:0071907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 46","termid":"PBO:0071907"}


id: GO:0098595
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The space between the membrane of an oocyte and a surrounding membranous structure (zona pellucida or perivitelline membrane).","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"perivitelline space","termid":"GO:0098595"}


id: PBO:0077271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM11 divergent transcript","termid":"PBO:0077271"}


id: PBO:0064026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 60","termid":"PBO:0064026"}


id: GO:1901869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ecgonine methyl ester.","definition_xrefs":["GOC:TermGenie","PMID:22665766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropane alkaloid biosynthetic process","termid":"GO:0009710"},{"relation_name":"is_a","term_name":"ecgonine methyl ester metabolic process","termid":"GO:1901867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"ecgonine methyl ester biosynthetic process","synonyms":[{"name":"ecgonine methyl ester anabolism","type":"exact"},{"name":"ecgonine methyl ester biosynthesis","type":"exact"},{"name":"ecgonine methyl ester formation","type":"exact"},{"name":"ecgonine methyl ester synthesis","type":"exact"}],"termid":"GO:1901869"}


id: PBO:0065733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain containing 4","termid":"PBO:0065733"}


id: PBO:0067053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 74, pseudogene","termid":"PBO:0067053"}


id: PBO:0090983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acylglycerol lipase","termid":"PBO:0090983"}


id: PBO:0049379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF3C2 antisense RNA 1","termid":"PBO:0049379"}


id: PBO:0036008
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_import_into_nucleus_during_vegetative_growth","termid":"PBO:0036008"}


id: GO:0098955
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the presynaptic endosome membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of presynaptic endosome membrane (obsolete GO:0098955)","synonyms":[{"name":"intrinsic to presynaptic endosome membrane","type":"exact"}],"termid":"GO:0098955"}


id: PBO:0061848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OLA1 pseudogene 2","termid":"PBO:0061848"}


id: PR:Q09761
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sld3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication regulator sld3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24H6.06","synonyms":[{"name":"Spom972h-sld3","type":"exact"},{"name":"meiotically up-regulated gene 175 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09761"}


id: GO:0070206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a protein trimer, a macromolecular structure consisting of three noncovalently associated identical or nonidentical subunits.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein complex oligomerization","termid":"GO:0051259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"protein trimerization","synonyms":[{"name":"protein trimer assembly","type":"exact"},{"name":"protein trimer biosynthesis","type":"exact"},{"name":"protein trimer biosynthetic process","type":"exact"},{"name":"protein trimer formation","type":"exact"}],"termid":"GO:0070206"}


id: GO:0052580
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (-)-menthone + NADP+ = (+)-pulegone + NADPH + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete (+)-pulegone reductase, (-)-menthone as substrate, activity (obsolete GO:0052580)","termid":"GO:0052580"}


id: PBO:0065348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRXL2C pseudogene 1","termid":"PBO:0065348"}


id: PBO:0075582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine peptidase inhibitor Kazal type 6","termid":"PBO:0075582"}


id: GO:0086067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates interactions between an AV node cell and its surroundings that contributes to the process of the AV node cell communicating with a bundle of His cell in cardiac conduction. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication involved in cardiac conduction","termid":"GO:0086065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"AV node cell to bundle of His cell communication","synonyms":[{"name":"atrioventricular node cell to bundle of His cell communication","type":"exact"}],"termid":"GO:0086067"}


id: FYPO:0002747
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-lysine measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular lysine level","synonyms":[{"name":"normal cellular L-lysine level","type":"exact"},{"name":"normal cellular lysine level during mitotic cell cycle","type":"related"},{"name":"normal cellular lysine level during vegetative growth","type":"exact"},{"name":"normal level of lysine in cell","type":"exact"}],"termid":"FYPO:0002747"}


id: GO:0061171
data:
  {"annotated_genes":["SJAG_04522","SJAG_00317","SJAG_03486","SJAG_00845","SJAG_01456","SJAG_04322","SJAG_01373","SJAG_00514","SJAG_02838","SJAG_03596","SJAG_03705","SJAG_00030","SJAG_04724","SJAG_00216"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88633,100697,115222],"is_not":false,"summary":null,"term":"GO:0061171"},{"annotations":[112556,106817,113971,102900,99554,95800,84126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051523"},{"annotations":[87015],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1904846"},{"annotations":[103666,108533,99766],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0061173"}]},"cv_name":"biological_process","definition":"The specification and formation of bipolar intracellular organization or cell growth patterns. Bipolar organization is the organization that is a mirror image along an axis from a plane.","definition_xrefs":["GOC:vw","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of cell polarity","termid":"GO:0030010"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00216":null,"SJAG_00317":null,"SJAG_00514":null,"SJAG_00845":null,"SJAG_01373":null,"SJAG_01456":null,"SJAG_02838":null,"SJAG_03486":null,"SJAG_03596":null,"SJAG_03705":null,"SJAG_04322":null,"SJAG_04522":null,"SJAG_04724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment of bipolar cell polarity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:30664646":null},"termid":"GO:0061171","terms_by_termid":{"GO:0051523":null,"GO:0061171":null,"GO:0061173":null,"GO:1904846":null}}


id: PBO:0045671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein cytoplasmic 1 intermediate chain 2","termid":"PBO:0045671"}


id: FYPO:0005764
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork pausing occurs to a greater extent than normal in regions containing G-quartet (G4) motifs.","definition_xrefs":["PomBase:mah","PMID:27611590","PMID:25471935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased replication fork pausing","termid":"FYPO:0005763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000293","FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased replication fork pausing at G4 motif","synonyms":[{"name":"increased replication fork pausing at G-quadruplex","type":"exact"},{"name":"increased replication fork pausing at G-quartet","type":"exact"},{"name":"increased replication fork pausing at G4 motif during mitotic cell cycle","type":"related"},{"name":"increased replication fork pausing at G4 motif during vegetative growth","type":"exact"}],"termid":"FYPO:0005764"}


id: PBO:0002528
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.65","termid":"PBO:0002528"}


id: PBO:0000701
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis-specific splicing","termid":"PBO:0000701"}


id: PBO:0076519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 22 pseudogene","termid":"PBO:0076519"}


id: GO:1904421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a D-galactosamine stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:12057922"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to D-galactosamine","termid":"GO:1904421"}


id: PBO:0063199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pterin-4 alpha-carbinolamine dehydratase 1","termid":"PBO:0063199"}


id: PBO:0073313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small EDRK-rich factor 1B","termid":"PBO:0073313"}


id: GO:0062023
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extracellular matrix consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that provides not only essential physical scaffolding for the cellular constituents but can also initiate crucial biochemical and biomechanical cues required for tissue morphogenesis, differentiation and homeostasis. The components are secreted by cells in the vicinity and form a sheet underlying or overlying cells such as endothelial and epithelial cells.","definition_xrefs":["PMID:21123617","GOC:rph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix","termid":"GO:0031012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"collagen-containing extracellular matrix","termid":"GO:0062023"}


id: GO:0032041
data:
  {"annotated_genes":["SJAG_04039"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86120],"is_not":false,"summary":null,"term":"GO:0032041"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3 N6-acetyl-L-lysine (position 14) + H2O = histone H3 L-lysine (position 14) + acetate. This reaction requires the presence of NAD, and represents the removal of an acetyl group from lysine at position 14 of the histone H3 protein.","definition_xrefs":["PMID:28450737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD-dependent histone deacetylase activity","termid":"GO:0017136"},{"relation_name":"is_a","term_name":"histone H3K14 deacetylase activity","termid":"GO:0031078"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04039":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0003674","GO:0016787","GO:0016810","GO:0019213","GO:0033558"],"is_obsolete":false,"name":"NAD-dependent histone H3K14 deacetylase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NAD-dependent histone H3-K14 deacetylase activity","type":"exact"},{"name":"NAD-dependent histone deacetylase activity (H3-K14 specific)","type":"exact"}],"termid":"GO:0032041","terms_by_termid":{"GO:0032041":null}}


id: PBO:0089287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane transporter","termid":"PBO:0089287"}


id: PBO:0084326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Karyopherin responsible for the nuclear import of Rpf1p; Rpf1p is a ribosome maturation factor","termid":"PBO:0084326"}


id: GO:1904344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gastric mucosal blood circulation.","definition_xrefs":["GOC:TermGenie","PMID:10807413","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood circulation","termid":"GO:1903522"},{"relation_name":"regulates","term_name":"gastric mucosal blood circulation","termid":"GO:1990768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of gastric mucosal blood circulation","synonyms":[{"name":"regulation of stomach mucosal blood circulation","type":"exact"}],"termid":"GO:1904344"}


id: PBO:0031484
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_spindle_assembly","termid":"PBO:0031484"}


id: GO:0061068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the urethra over time from its initial formation to the mature structure. The urethra is a renal system organ that carries urine from the bladder to outside the body.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"renal system development","termid":"GO:0072001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"urethra development","termid":"GO:0061068"}


id: GO:0031671
data:
  {"annotated_genes":["SJAG_03048","SJAG_04597","SJAG_04666","SJAG_02222","SJAG_02916","SJAG_04776"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102150,110447],"is_not":false,"summary":null,"term":"GO:0031671"},{"annotations":[98434],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905757"},{"annotations":[88467,90473,83612],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905758"}]},"cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a primary cell septum following nuclear division.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component biogenesis","termid":"GO:0044085"},{"relation_name":"is_a","term_name":"mitotic cytokinetic process","termid":"GO:1902410"},{"relation_name":"part_of","term_name":"mitotic division septum assembly","termid":"GO:0140278"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02222":null,"SJAG_02916":null,"SJAG_03048":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0007049","GO:0008150","GO:0000281"],"is_obsolete":false,"name":"primary cell septum biogenesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031671","terms_by_termid":{"GO:0031671":null,"GO:1905757":null,"GO:1905758":null}}


id: PBO:0044858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta 4-desaturase, sphingolipid 1","termid":"PBO:0044858"}


id: GO:0071979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell motility in which contractile cytoskeletal elements alter cell shape, resulting in the smooth movement of a cell through a liquid medium.","definition_xrefs":["PMID:18461074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell swimming","termid":"GO:0071975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoskeleton-mediated cell swimming","synonyms":[{"name":"cytoskeleton-mediated swimming motility","type":"exact"}],"termid":"GO:0071979"}


id: GO:0072057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the inner stripe over time, from its formation to the mature structure. The inner stripe is a deep, centrally located portion of the renal outer medulla and is traversed by thin descending and thick ascending portions of the loops of Henle.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"renal outer medulla development","termid":"GO:0072054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner stripe development","termid":"GO:0072057"}


id: GO:0060662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the solid core of salivary epithelium gives rise to the hollow tube of the gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube lumen cavitation","termid":"GO:0060605"},{"relation_name":"part_of","term_name":"salivary gland morphogenesis","termid":"GO:0007435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"salivary gland cavitation","synonyms":[{"name":"salivary gland invagination","type":"exact"}],"termid":"GO:0060662"}


id: FYPO:0007372
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of chlorpromazine than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002682","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"resistance to chlorpromazine","synonyms":[{"name":"resistance to chlorpromazine during mitotic cell cycle","type":"related"},{"name":"resistance to chlorpromazine during vegetative growth","type":"exact"},{"name":"resistant to chlorpromazine","type":"exact"}],"termid":"FYPO:0007372"}


id: PBO:0081743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 674","termid":"PBO:0081743"}


id: PBO:0068225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 532","termid":"PBO:0068225"}


id: PBO:0085610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in directionality of mating type switching; acts with Fkh1p to control which donor mating-type locus is inserted into MAT locus during mating type switching; localized to the nucleus; not an essential gene","termid":"PBO:0085610"}


id: PBO:0028028
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_meiotic_anaphase_I","termid":"PBO:0028028"}


id: GO:0051643
data:
  {"annotated_genes":["SJAG_01168","SJAG_04413","SJAG_03170","SJAG_01564","SJAG_04221","SJAG_02626","SJAG_01437","SJAG_01116","SJAG_04417","SJAG_00053","SJAG_03247"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97845,100434,114218,86469,107724,115010,114740,87533,93517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061817"},{"annotations":[86470,100436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051685"},{"annotations":[103076,111271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990854"}]},"cv_name":"biological_process","definition":"Any process in which endoplasmic reticulum is transported to, and/or maintained in, a specific location within the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle localization","termid":"GO:0051640"},{"relation_name":"part_of","term_name":"endoplasmic reticulum organization","termid":"GO:0007029"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_01116":null,"SJAG_01168":null,"SJAG_01437":null,"SJAG_01564":null,"SJAG_02626":null,"SJAG_03170":null,"SJAG_03247":null,"SJAG_04221":null,"SJAG_04413":null,"SJAG_04417":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ER localization","type":"exact"},{"name":"endoplasmic reticulum localisation","type":"exact"},{"name":"establishment and maintenance of ER localization","type":"exact"}],"termid":"GO:0051643","terms_by_termid":{"GO:0051685":null,"GO:0061817":null,"GO:1990854":null}}


id: PBO:0005431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP(CTP) tRNA nucleotidyltransferase (predicted)","termid":"PBO:0005431"}


id: FYPO:0008087
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which autophagic degradation of the nucleus during nitrogen starvation is decreased.","definition_xrefs":["PMID:37191320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleophagy","termid":"FYPO:0008085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased nucleophagy during nitrogen starvation","termid":"FYPO:0008087"}


id: GO:0075263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that leads to the development of an oogonium, a female gametangium of Oomycetes, containing one or more gametes.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oogonium development","termid":"GO:0075263"}


id: PBO:0030184
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_cell_population","termid":"PBO:0030184"}


id: PBO:0082558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ceramide-activated, type 2A-related serine-threonine phosphatase; functions in G1/S transition of mitotic cycle; controls lifespan, mitochondrial function, cell cycle progression by regulating HXK2 phosphorylation; regulator of COPII coat dephosphorylation; required for ER to Golgi traffic; interacts with Hrr25p kinase; cytoplasmic and nuclear protein that modulates functions mediated by Pkc1p including cell wall and actin cytoskeleton organization; similar to human PP6","termid":"PBO:0082558"}


id: PBO:0016540
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetrameric","termid":"PBO:0016540"}


id: PBO:0084950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multigene complex, polymeric locus for maltose fermentation; encodes the MAL63 trans-acting MAL-activator, MAL61 maltose permease, and MAL62 maltase; on the left arm of Chromosome VIII, but not in strain S288C","termid":"PBO:0084950"}


id: PBO:0000278
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transmembrane helix","termid":"PBO:0000278"}


id: GO:0099610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initiating cycle of an action potential. In vertebrate neurons this typically occurs at an axon hillock. Not all initiated axon potentials propagate.","definition_xrefs":["ISBN:978-0071390118","PMID:19439602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"action potential","termid":"GO:0001508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"action potential initiation","synonyms":[{"name":"action potential firing","type":"exact"},{"name":"action potential triggering","type":"exact"}],"termid":"GO:0099610"}


id: PBO:0056597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MDH1 pseudogene 2","termid":"PBO:0056597"}


id: PBO:0090534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eIF-5A-deoxyhypusine synthase Dys1","termid":"PBO:0090534"}


id: GO:0120195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of anther dehiscence.","definition_xrefs":["GOC:lr","PMID:30911018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anther dehiscence","termid":"GO:0120194"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"anther dehiscence","termid":"GO:0009901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of anther dehiscence","termid":"GO:0120195"}


id: PBO:0066321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBX1 pseudogene 1","termid":"PBO:0066321"}


id: GO:0000275
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The catalytic sector of the mitochondrial hydrogen-transporting ATP synthase; it comprises the catalytic core and central stalk, and is peripherally associated with the mitochondrial inner membrane when the entire ATP synthase is assembled.","definition_xrefs":["PMID:10838056","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) (obsolete GO:0000275)","synonyms":[{"name":"hydrogen-transporting ATP synthase, F1 sector","type":"broad"},{"name":"proton-transporting ATP synthase complex, catalytic core F(1)","type":"broad"}],"termid":"GO:0000275"}


id: PBO:0056096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LY6/PLAUR domain containing 1","termid":"PBO:0056096"}


id: GO:0042826
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to histone deacetylase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"histone deacetylase binding","termid":"GO:0042826"}


id: FYPO:0003475
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of arsenate reductase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"abnormal arsenate reductase activity","termid":"FYPO:0003475"}


id: PBO:0074266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMC5-SMC6 complex localization factor 1","termid":"PBO:0074266"}


id: GO:0072564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular component organization process in which microparticles bud off from a parent cell. A microparticle is a phospholipid microvesicle that is derived from any of several cell types, such as platelets, blood cells, endothelial cells, or others, and contains membrane receptors as well as other proteins characteristic of the parental cell.","definition_xrefs":["GOC:BHF","GOC:mah","PMID:16373184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood microparticle formation","synonyms":[{"name":"microparticle generation","type":"exact"},{"name":"microparticle release","type":"exact"}],"termid":"GO:0072564"}


id: PBO:0087159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA pol III transcription initiation factor complex (TFIIIC) subunit; part of the TauA globular domain of TFIIIC that binds DNA at the BoxA promoter sites of tRNA and similar genes; TFC7 has a paralog, YNL108C, that arose from the whole genome duplication","termid":"PBO:0087159"}


id: PBO:0044002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUB and Sushi multiple domains 2","termid":"PBO:0044002"}


id: FYPO:0001303
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of myristoyl-CoA ligase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal long-chain fatty acid-CoA ligase activity","termid":"FYPO:0001305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0005447","FYPO:0000654","FYPO:0000707","FYPO:0000002","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"abnormal myristoyl-CoA ligase activity","synonyms":[{"name":"abnormal myristoyl-CoA synthetase activity","type":"exact"}],"termid":"FYPO:0001303"}


id: FYPO:0005204
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which positive regulation of DNA-directed DNA polymerase activity occurs to a greater extent than normal.","definition_xrefs":["PMID:9563836","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of catalytic activity","termid":"FYPO:0004916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased positive regulation of DNA-directed DNA polymerase activity","synonyms":[{"name":"increased activation of DNA-directed DNA polymerase activity","type":"narrow"},{"name":"increased positive regulation of DNA polymerase activity","type":"broad"},{"name":"increased positive regulation of DNA-directed DNA polymerase activity during mitotic cell cycle","type":"related"},{"name":"increased positive regulation of DNA-directed DNA polymerase activity during vegetative growth","type":"exact"}],"termid":"FYPO:0005204"}


id: GO:0051943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the directed movement of amino acid neurotransmitters into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter uptake","termid":"GO:0051582"},{"relation_name":"is_a","term_name":"regulation of amino acid uptake involved in synaptic transmission","termid":"GO:0051941"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"positively_regulates","term_name":"amino acid neurotransmitter reuptake","termid":"GO:0051933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of amino acid uptake involved in synaptic transmission","synonyms":[{"name":"activation of amino acid uptake during transmission of nerve impulse","type":"related"},{"name":"positive regulation of amino acid neurotransmitter reuptake","type":"exact"},{"name":"positive regulation of amino acid neurotransmitter uptake","type":"exact"},{"name":"stimulation of amino acid uptake during transmission of nerve impulse","type":"narrow"},{"name":"up regulation of amino acid uptake during transmission of nerve impulse","type":"related"},{"name":"up-regulation of amino acid uptake during transmission of nerve impulse","type":"related"},{"name":"upregulation of amino acid uptake during transmission of nerve impulse","type":"related"}],"termid":"GO:0051943"}


id: GO:0071012
data:
  {"annotated_genes":["SJAG_01315","SJAG_04117","SJAG_04898","SJAG_04783","SJAG_01504"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92904,91452,101818,96746,113291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071006"}]},"cv_name":"cellular_component","definition":"A spliceosomal complex that is formed by the displacement of the two snRNPs from the precatalytic spliceosome; three snRNPs including U5 remain associated with the mRNA. This complex, sometimes called the activated spliceosome, is the catalytically active form of the spliceosome, and includes many proteins in addition to those found in the associated snRNPs.","definition_xrefs":["GOC:krc","GOC:mah","PMID:18322460","PMID:19239890","GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal complex","termid":"GO:0005681"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01315":null,"SJAG_01504":null,"SJAG_04117":null,"SJAG_04783":null,"SJAG_04898":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"catalytic step 1 spliceosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activated spliceosome","type":"exact"},{"name":"mammalian spliceosomal complex B*","type":"narrow"},{"name":"mammalian spliceosomal complex B2","type":"narrow"},{"name":"yeast spliceosomal complex A1","type":"narrow"}],"termid":"GO:0071012","terms_by_termid":{"GO:0071006":null}}


id: PBO:0084847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; homologous to bacterial L16 ribosomal protein; synthetic lethality with hac1 mutation suggests a possible role in synthesis of precursors for protein glycosylation","termid":"PBO:0084847"}


id: PBO:0066448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA exonuclease 1 homolog","termid":"PBO:0066448"}


id: PBO:0017952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex substrate recognition subunit Apc10","termid":"PBO:0017952"}


id: PBO:0078146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 25","termid":"PBO:0078146"}


id: PBO:0061557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-nucleotidase domain containing 1","termid":"PBO:0061557"}


id: GO:0004340
data:
  {"annotated_genes":["SJAG_04334","SJAG_04495"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90592,94064],"is_not":false,"summary":null,"term":"GO:0004340"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + D-glucose = ADP + D-glucose-6-phosphate.","definition_xrefs":["EC:2.7.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexokinase activity","termid":"GO:0004396"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"glucokinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-70420","MetaCyc:GLUCOKIN-RXN","Reactome:R-HSA-5621888","RHEA:17825","Reactome:R-HSA-5621918"],"synonyms":[{"name":"ATP:D-glucose 6-phosphotransferase activity","type":"related"},{"name":"glucokinase (phosphorylating)","type":"related"},{"name":"glucose kinase activity","type":"related"}],"termid":"GO:0004340","terms_by_termid":{"GO:0004340":null}}


id: PBO:0066991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 294","termid":"PBO:0066991"}


id: GO:0010900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of phosphatidylcholine catabolism. Phosphatidylcholine catabolic processes are the chemical reactions and pathways resulting in the breakdown of phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline.","definition_xrefs":["GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatidylcholine catabolic process","termid":"GO:0010899"},{"relation_name":"is_a","term_name":"negative regulation of cellular catabolic process","termid":"GO:0031330"},{"relation_name":"is_a","term_name":"negative regulation of lipid catabolic process","termid":"GO:0050995"},{"relation_name":"is_a","term_name":"negative regulation of phosphatidylcholine metabolic process","termid":"GO:0150174"},{"relation_name":"negatively_regulates","term_name":"phosphatidylcholine catabolic process","termid":"GO:0034638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044248"],"is_obsolete":false,"name":"negative regulation of phosphatidylcholine catabolic process","termid":"GO:0010900"}


id: GO:0019250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cobalamin (vitamin B12) in the presence of oxygen.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cobalamin biosynthetic process","termid":"GO:0009236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0033013","GO:0044281"],"is_obsolete":false,"name":"aerobic cobalamin biosynthetic process","secondary_identifiers":["MetaCyc:P381-PWY"],"synonyms":[{"name":"aerobic cobalamin anabolism","type":"exact"},{"name":"aerobic cobalamin biosynthesis","type":"exact"},{"name":"aerobic cobalamin formation","type":"exact"},{"name":"aerobic cobalamin synthesis","type":"exact"},{"name":"aerobic vitamin B12 biosynthesis","type":"exact"},{"name":"aerobic vitamin B12 biosynthetic process","type":"exact"},{"name":"cobalamin biosynthesis, aerobic","type":"exact"},{"name":"cobalamin biosynthetic process, aerobic","type":"exact"},{"name":"vitamin B12 biosynthesis, aerobic","type":"exact"},{"name":"vitamin B12 biosynthetic process, aerobic","type":"exact"}],"termid":"GO:0019250"}


id: PBO:0046050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF3E pseudogene 3","termid":"PBO:0046050"}


id: GO:0043158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular developmental process by which a cell becomes a heterocyst, a cell that carries out nitrogen fixation. This process involves changes to the cell wall, expression of nitrogenase and other proteins involved in nitrogen fixation, and degradation of photosystem II, which produces oxygen. This process is known to occur in some cyanobacteria.","definition_xrefs":["PMID:11121783","PMID:35744626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heterocyst development","synonyms":[{"name":"heterocyst cell differentiation","type":"related"},{"name":"heterocyst differentiation","type":"related"},{"name":"heterocyst formation","type":"exact"}],"termid":"GO:0043158"}


id: GO:0090168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reformation of the Golgi following its breakdown and partitioning contributing to Golgi inheritance.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi organization","termid":"GO:0007030"},{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"Golgi inheritance","termid":"GO:0048313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"Golgi reassembly","synonyms":[{"name":"Golgi apparatus reassembly","type":"exact"}],"termid":"GO:0090168"}


id: PBO:0043654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 9","termid":"PBO:0043654"}


id: SO:0001235
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region containing at least one unique origin of replication and a unique termination site.","definition_xrefs":["ISBN:0716719207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replicon","secondary_identifiers":["http://en.wikipedia.org/wiki/Replicon_(genetics)"],"termid":"SO:0001235"}


id: GO:0007431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the salivary gland over time, from its formation to the mature structure. Salivary glands include any of the saliva-secreting exocrine glands of the oral cavity.","definition_xrefs":["GOC:jid","UBERON:0001044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"},{"relation_name":"part_of","term_name":"exocrine system development","termid":"GO:0035272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"salivary gland development","termid":"GO:0007431"}


id: GO:0010091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the formation of branches in plant hair cells. An example of this process is found in Arabidopsis thaliana.","definition_xrefs":["GOC:tair_curators","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"part_of","term_name":"trichome morphogenesis","termid":"GO:0010090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trichome branching","secondary_identifiers":["GO:0048274"],"termid":"GO:0010091"}


id: PBO:0005313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin Atg20 (predicted)","termid":"PBO:0005313"}


id: GO:0097408
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cellular inclusion consisting of circular areas filled with fine slender filaments about 10 nanometers in diameter, delimited by a wall of varying complexity (either a single continuous membrane or a tubular network consisting of a fine filamentous material giving the wall a honeycomb appearance). Fibrillary inclusions are found in the cytoplasm of giant cells of Dieters in the lateral vestibular nucleus of the rat; similar structures have been described in the ventral cochlear nucleus, spinal cord, and substantia nigra.","definition_xrefs":["NIF_Subcellular:sao967812059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body","termid":"GO:0016234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"fibrillary inclusion","termid":"GO:0097408"}


id: PBO:0068335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 43","termid":"PBO:0068335"}


id: PBO:0081310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 92","termid":"PBO:0081310"}


id: PBO:0008152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome segregation protein Csm1/Pcs1","termid":"PBO:0008152"}


id: PBO:0080177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 12","termid":"PBO:0080177"}


id: PBO:0110167
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_approver_orcid","termid":"PBO:0110167"}


id: GO:1904927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a palmitoleic acid stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","GOC:mr","PMID:25429233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to fatty acid","termid":"GO:0071398"},{"relation_name":"is_a","term_name":"response to palmitoleic acid","termid":"GO:1904926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to palmitoleic acid","termid":"GO:1904927"}


id: PBO:0076596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 17","termid":"PBO:0076596"}


id: FYPO:0005202
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to rapamycin is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic cell cycle regulation during cellular response to rapamycin","synonyms":[{"name":"abnormal cell cycle regulation during cellular response to rapamycin","type":"exact"},{"name":"abnormal cell cycle regulation during cellular response to rapamycin during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to rapamycin during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle regulation in response to rapamycin","type":"exact"}],"termid":"FYPO:0005202"}


id: PBO:0038389
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-assayed_protein","termid":"PBO:0038389"}


id: GO:0005006
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an epidermal growth factor receptor ligand and transmitting the signal across the plasma membrane to initiate a change in cell activity.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein tyrosine kinase activity","termid":"GO:0004714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0004672","GO:0140096","GO:0016301","GO:0003674","GO:0003824","GO:0016740","GO:0038023"],"is_obsolete":false,"name":"epidermal growth factor receptor activity","secondary_identifiers":["GO:0005023"],"synonyms":[{"name":"EGF receptor activity","type":"exact"},{"name":"EGFR","type":"exact"},{"name":"TGF-alpha receptor activity","type":"exact"},{"name":"epidermal growth factor-activated receptor activity","type":"exact"},{"name":"transforming growth factor-alpha receptor activity","type":"exact"}],"termid":"GO:0005006"}


id: PBO:0056020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich single-pass membrane protein 1","termid":"PBO:0056020"}


id: GO:0000271
data:
  {"annotated_genes":["SJAG_02222","SJAG_01376","SJAG_04483","SJAG_04236","SJAG_02916","SJAG_00183","SJAG_02446","SJAG_04878","SJAG_01835","SJAG_01028","SJAG_04509","SJAG_01209","SJAG_04073","SJAG_03705","SJAG_01963","SJAG_04184","SJAG_03587","SJAG_01426","SJAG_01787","SJAG_04666","SJAG_04668","SJAG_00610","SJAG_00424","SJAG_00218","SJAG_00876","SJAG_04462","SJAG_04771","SJAG_00963","SJAG_01453","SJAG_01290","SJAG_01288","SJAG_02590","SJAG_05285","SJAG_03123","SJAG_02278","SJAG_03057"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86653,90275,98516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006078"},{"annotations":[96678,101808,89385,91310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051072"},{"annotations":[110444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030979"},{"annotations":[90522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[105350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[87643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051274"},{"annotations":[105127,85211,110445,113859,100235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[84140,109227,102146,103830,87644,111886,87633,105352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[98702,104666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[102148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051278"},{"annotations":[104952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005978"},{"annotations":[86987,77669],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045719"},{"annotations":[88464],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0060635"},{"annotations":[83594,88468],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[83967],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032951"},{"annotations":[86830,88470,101390,113975,88453,98910],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"},{"annotations":[90995,88474,85506,98912],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"},{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"is_a","term_name":"carbohydrate biosynthetic process","termid":"GO:0016051"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00183":null,"SJAG_00218":null,"SJAG_00424":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_00963":null,"SJAG_01028":null,"SJAG_01209":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01376":null,"SJAG_01426":null,"SJAG_01453":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_01963":null,"SJAG_02222":null,"SJAG_02278":null,"SJAG_02446":null,"SJAG_02590":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04073":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_04878":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"polysaccharide biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"glycan biosynthesis","type":"exact"},{"name":"glycan biosynthetic process","type":"exact"},{"name":"polysaccharide anabolism","type":"exact"},{"name":"polysaccharide biosynthesis","type":"exact"},{"name":"polysaccharide formation","type":"exact"},{"name":"polysaccharide synthesis","type":"exact"}],"termid":"GO:0000271","terms_by_termid":{"GO:0005978":null,"GO:0006078":null,"GO:0030979":null,"GO:0032951":null,"GO:0034412":null,"GO:0034413":null,"GO:0045719":null,"GO:0051072":null,"GO:0051274":null,"GO:0051278":null,"GO:0060635":null,"GO:0070600":null,"GO:0070610":null,"GO:0070880":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: GO:0103058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: kaempferol 3-O-glucoside + UDP-L-rhamnose = kaempferol-3-glucoside-7-rhamnoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete kaempferol 3-glucoside 7-O-rhamnosyltransferase activity (obsolete GO:0103058)","termid":"GO:0103058"}


id: PBO:0059288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L42 pseudogene 3","termid":"PBO:0059288"}


id: GO:0033560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydrofolate + NADP+ = folate + NADPH + H+.","definition_xrefs":["GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"folate reductase activity","secondary_identifiers":["Reactome:R-HSA-197963","Reactome:R-HSA-197972","Reactome:R-HSA-9709098","RHEA:31103"],"termid":"GO:0033560"}


id: PBO:0014281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG box protein Hmo1","termid":"PBO:0014281"}


id: PBO:0084985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP+ dependent arabinose dehydrogenase; involved in carbohydrate metabolism; purified as homodimer; naturally occurs with a N-terminus degradation product","termid":"PBO:0084985"}


id: PBO:0087490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of cytochrome C oxidase complex; stabilizes or regulates formation of respiratory chain supercomplexes composed of Complex III (ubiquinol-cytochrome c reductase) and Complex IV (cytochrome c oxidase)","termid":"PBO:0087490"}


id: FYPO:0004293
data:
  {"alleles_by_uniquename":{"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02695:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02695","name":"tip1delta","uniquename":"SJAG_02695:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"G788E","gene_uniquename":"SJAG_04280","name":"wee1-G788E","uniquename":"SJAG_04280:allele-2"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115214],"is_not":false,"summary":null,"term":"FYPO:0004293"}],"single_locus_phenotype":[{"annotations":[115242],"is_not":false,"summary":null,"term":"FYPO:0004293"},{"annotations":[115245],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007801"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a cell or hypha has a septum in an abnormal location. The normal location during yeast-form growth is at the midpoint of the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum","termid":"FYPO:0004292"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02392":null,"SJAG_02695":null,"SJAG_04280":null,"SJAG_04522":null},"genotype_count":3,"genotypes_by_uniquename":{"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta__wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-G788E(aa)","display_uniquename":"rga4delta__wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]},"tip1delta":{"display_name":"tip1delta","display_uniquename":"tip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02695:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04522","SJAG_04280"],"name":"mislocalized septum","references_by_uniquename":{"PMID:30664646":null,"PMID:30726171":null},"single_locus_annotated_genes":["SJAG_02695","SJAG_02392"],"single_locus_genotype_uniquenames":["pom1delta","tip1delta"],"synonyms":[{"name":"abnormal septum localization","type":"related"},{"name":"abnormal septum location","type":"exact"},{"name":"abnormal septum position","type":"exact"},{"name":"abnormal septum positioning","type":"related"},{"name":"asymmetric septum","type":"related"},{"name":"asymmetrically located septum","type":"related"},{"name":"mislocalised septum","type":"exact"},{"name":"misplaced septum","type":"exact"}],"termid":"FYPO:0004293","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0004293":null,"FYPO:0007801":null,"FYPO_EXT:0000001":null}}


id: PBO:0053541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 545","termid":"PBO:0053541"}


id: PATO:0002314
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Having the nature or characteristic of, a ligament; composed of the tissue proper to ligaments.","definition_xrefs":["PATOC:BF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligamentous","termid":"PATO:0002314"}


id: PBO:0013453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Cox1102/ mitochondrial ribosomal protein Rsm2202, fusion protein (predicted)","termid":"PBO:0013453"}


id: PBO:0059901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 24","termid":"PBO:0059901"}


id: PBO:0051888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin alpha FG-GAP repeat containing 2","termid":"PBO:0051888"}


id: FYPO:0006669
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which one cell mates with two partners, leading to the fusion of three cells. The resulting zygote can then undergo sporulation to form an ascus containing more than four spores.","definition_xrefs":["PMID:30089908","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abnormal sporulation resulting in formation of ascus with more than four spores","termid":"FYPO:0003263"},{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000301"],"is_obsolete":false,"name":"abnormal mating between three cells","synonyms":[{"name":"abnormal conjugation between three cells","type":"exact"},{"name":"abnormal mating among three cells","type":"exact"}],"termid":"FYPO:0006669"}


id: PBO:0046569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 11","termid":"PBO:0046569"}


id: GO:1905775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ATP-dependent DNA helicase activity.","definition_xrefs":["GOC:TermGenie","PMID:19734539","GOC:rb","PMID:13679365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of helicase activity","termid":"GO:0051097"},{"relation_name":"is_a","term_name":"negative regulation of DNA duplex unwinding","termid":"GO:1905463"},{"relation_name":"is_a","term_name":"regulation of DNA helicase activity","termid":"GO:1905774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA helicase activity","secondary_identifiers":["GO:1902450"],"synonyms":[{"name":"down regulation of ATP-dependent DNA helicase activity","type":"exact"},{"name":"down regulation of DNA helicase activity","type":"exact"},{"name":"down-regulation of ATP-dependent DNA helicase activity","type":"exact"},{"name":"down-regulation of DNA helicase activity","type":"exact"},{"name":"downregulation of ATP-dependent DNA helicase activity","type":"exact"},{"name":"downregulation of DNA helicase activity","type":"exact"},{"name":"inhibition of ATP-dependent DNA helicase activity","type":"narrow"},{"name":"inhibition of DNA helicase activity","type":"narrow"},{"name":"negative regulation of ATP-dependent DNA helicase activity","type":"exact"}],"termid":"GO:1905775"}


id: GO:0097178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a ruffle, a projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork. The formation of ruffles (also called membrane ruffling) is thought to be controlled by a group of enzymes known as Rho GTPases, specifically RhoA, Rac1 and cdc42.","definition_xrefs":["PMID:12556481","Wikipedia:Membrane_ruffling","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ruffle organization","termid":"GO:0031529"},{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"ruffle assembly","synonyms":[{"name":"membrane ruffle formation","type":"exact"},{"name":"membrane ruffling","type":"exact"}],"termid":"GO:0097178"}


id: PBO:0057317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 518d","termid":"PBO:0057317"}


id: PBO:0064842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 12B pseudogene 2","termid":"PBO:0064842"}


id: PBO:0031899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane signaling receptor Wsc1 (predicted)","termid":"PBO:0031899"}


id: PBO:0090174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GEF, implicated in endosomal transport","termid":"PBO:0090174"}


id: GO:1902703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of hexose to butan-1-ol.","definition_xrefs":["PMID:19539744","GO_REF:0000093","PMID:18727018","GOC:mengo_curators","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete hexose catabolic process to butan-1-ol (obsolete GO:1902703)","synonyms":[{"name":"hexose breakdown to butan-1-ol","type":"exact"},{"name":"hexose catabolic process to 1-butanol","type":"exact"},{"name":"hexose catabolic process to butanol","type":"exact"},{"name":"hexose catabolism to butan-1-ol","type":"exact"},{"name":"hexose degradation to butan-1-ol","type":"exact"},{"name":"solventogenesis","type":"broad"}],"termid":"GO:1902703"}


id: SO:0000172
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Part of a conserved sequence located about 75-bp upstream of the start point of eukaryotic transcription units which may be involved in RNA polymerase binding; consensus=GG(C|T)CAATCT.","direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"},{"relation_name":"part_of","term_name":"RNApol_II_promoter","termid":"SO:0000170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAAT_signal","secondary_identifiers":["http://en.wikipedia.org/wiki/CAAT_box"],"synonyms":[{"name":"CAAT box","type":"exact"},{"name":"CAAT signal","type":"exact"},{"name":"CAAT-box","type":"exact"},{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:CAAT_signal","type":"exact"}],"termid":"SO:0000172"}


id: PBO:0035913
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_medial_membrane_band_assembly","termid":"PBO:0035913"}


id: GO:0036472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of interaction between host proteins.","definition_xrefs":["PMID:17297443","GOC:bf","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host protein-protein interaction (obsolete GO:0036472)","synonyms":[{"name":"suppression by virus of host protein binding","type":"exact"},{"name":"suppression by virus of host protein interaction","type":"exact"},{"name":"suppression by virus of host protein:protein binding","type":"exact"},{"name":"suppression by virus of host protein:protein interaction","type":"exact"}],"termid":"GO:0036472"}


id: GO:0086084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein or protein complex that results in the connection of a Purkinje myocyte with an ventricular cardiac muscle cell and contributes to the communication between the two cells.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding involved in heterotypic cell-cell adhesion","termid":"GO:0086080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098631"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488","GO:0098631"],"is_obsolete":false,"name":"cell adhesive protein binding involved in Purkinje myocyte-ventricular cardiac muscle cell communication","termid":"GO:0086084"}


id: GO:0097237
data:
  {"annotated_genes":["SJAG_00365","SJAG_04823","SJAG_03653","SJAG_04403","SJAG_04632","SJAG_04404","SJAG_01457","SJAG_00614","SJAG_01612","SJAG_03166","SJAG_01162","SJAG_01995","SJAG_02907","SJAG_01651","SJAG_03303","SJAG_02515","SJAG_04516","SJAG_02276","SJAG_03494","SJAG_04674","SJAG_00270","SJAG_00903","SJAG_06611","SJAG_01351","SJAG_00141","SJAG_05181","SJAG_04953","SJAG_01628","SJAG_01734","SJAG_04242","SJAG_03476","SJAG_03288","SJAG_01216","SJAG_04788","SJAG_02010","SJAG_01973","SJAG_02988","SJAG_00988","SJAG_02973","SJAG_01199","SJAG_04063","SJAG_04608","SJAG_00668","SJAG_02247","SJAG_03497","SJAG_01404","SJAG_04726","SJAG_03797","SJAG_02599","SJAG_03108","SJAG_02630","SJAG_01596","SJAG_03623","SJAG_05256","SJAG_03316","SJAG_01344","SJAG_00489","SJAG_02960","SJAG_04399","SJAG_00179","SJAG_04125","SJAG_02106","SJAG_00219"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86175,97861,98928,84048,114236,95902,108349,90739,91078,89172,109564,109076,98856,110662,99685,84145,110764,114662,90734,94434,84044,95073,88491,96384,102646,112190,96113,91008,104769,114803,93169,95261,109526,89171],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990748"},{"annotations":[108790],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110095"},{"annotations":[89357,114262,93118,93433,93080,104483],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0098849"},{"annotations":[96876,109803],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140114"},{"annotations":[96059,91256,101085,104884,113440,114350],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061692"},{"annotations":[101088],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140041"},{"annotations":[83483,98282],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070458"},{"annotations":[67257,67820,102842,63054,57333,101266,91257,67822,57332,64714,64715,67821,101350,102422],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0098869"},{"annotations":[91597,99542],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0046294"},{"annotations":[106145,67556,85047,95333,106189,58048,89182,64549,85470,96218],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxic stimulus.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to toxic substance","termid":"GO:0009636"},{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":63,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_00179":null,"SJAG_00219":null,"SJAG_00270":null,"SJAG_00365":null,"SJAG_00489":null,"SJAG_00614":null,"SJAG_00668":null,"SJAG_00903":null,"SJAG_00988":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01344":null,"SJAG_01351":null,"SJAG_01404":null,"SJAG_01457":null,"SJAG_01596":null,"SJAG_01612":null,"SJAG_01628":null,"SJAG_01651":null,"SJAG_01734":null,"SJAG_01973":null,"SJAG_01995":null,"SJAG_02010":null,"SJAG_02106":null,"SJAG_02247":null,"SJAG_02276":null,"SJAG_02515":null,"SJAG_02599":null,"SJAG_02630":null,"SJAG_02907":null,"SJAG_02960":null,"SJAG_02973":null,"SJAG_02988":null,"SJAG_03108":null,"SJAG_03166":null,"SJAG_03288":null,"SJAG_03303":null,"SJAG_03316":null,"SJAG_03476":null,"SJAG_03494":null,"SJAG_03497":null,"SJAG_03623":null,"SJAG_03653":null,"SJAG_03797":null,"SJAG_04063":null,"SJAG_04125":null,"SJAG_04242":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04404":null,"SJAG_04516":null,"SJAG_04608":null,"SJAG_04632":null,"SJAG_04674":null,"SJAG_04726":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05181":null,"SJAG_05256":null,"SJAG_06611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to toxic substance","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0097237","terms_by_termid":{"GO:0019430":null,"GO:0046294":null,"GO:0061692":null,"GO:0070458":null,"GO:0098849":null,"GO:0098869":null,"GO:0110095":null,"GO:0140041":null,"GO:0140114":null,"GO:1990748":null}}


id: PBO:0039320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachidonate 5-lipoxygenase activating protein","termid":"PBO:0039320"}


id: PBO:0071644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 8","termid":"PBO:0071644"}


id: GO:2000736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of stem cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"stem cell differentiation","termid":"GO:0048863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of stem cell differentiation","termid":"GO:2000736"}


id: GO:0030590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that occurs during the first cell cycle in an embryo, in which anterior cortical contractions culminate in a single partial constriction of the embryo called the pseudocleavage furrow. An example of this process is found in nematode worms.","definition_xrefs":["GOC:mtg_sensu","PMID:7729583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudocleavage","termid":"GO:0030588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"first cell cycle pseudocleavage","termid":"GO:0030590"}


id: GO:0033017
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding the sarcoplasmic reticulum.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"sarcoplasmic reticulum","termid":"GO:0016529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005783","GO:0005737","GO:0005575","GO:0005789"],"is_obsolete":false,"name":"sarcoplasmic reticulum membrane","termid":"GO:0033017"}


id: PBO:0081697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 619 pseudogene 1","termid":"PBO:0081697"}


id: PBO:0002450
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possible gene merge, unusual domain combination","termid":"PBO:0002450"}


id: PBO:0086899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transporter, member of the sugar porter family; localizes to the vacuolar membrane; non-essential gene; upregulated by and required for tolerance to 4-Methylcyclohexane methanol; YBR241C has a paralog, VPS73, that arose from the whole genome duplication","termid":"PBO:0086899"}


id: PBO:0039515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 30B pseudogene 3","termid":"PBO:0039515"}


id: GO:0019779
data:
  {"annotated_genes":["SJAG_00645"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107756],"is_not":false,"summary":null,"term":"GO:0019779"}]},"cv_name":"molecular_function","definition":"Catalysis of the activation of the small ubiquitin-related modifier APG8, through the formation of an ATP-dependent high-energy thiolester bond.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like modifier activating enzyme activity","termid":"GO:0008641"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00645":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016874","GO:0140096","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"Atg8 activating enzyme activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"APG7","type":"exact"},{"name":"APG8 activating enzyme activity","type":"related"}],"termid":"GO:0019779","terms_by_termid":{"GO:0019779":null}}


id: PBO:0090964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-3 adaptor complex subunit Apm3","termid":"PBO:0090964"}


id: GO:0034983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an acetyl group from an acetylated lysine residue in a peptide or protein.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deacetylation","termid":"GO:0006476"},{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine deacetylation","synonyms":[{"name":"protein lysine acetylation","type":"related"}],"termid":"GO:0034983"}


id: PBO:0044736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 18 pseudogene 4","termid":"PBO:0044736"}


id: MOD:01145
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to N-tau-(ADP-ribosyl)diphthamide.","definition_xrefs":["ChEBI:82697","DeltaMass:0"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"2'-[3-carboxamido-3-(trimethylammonio)propyl]-L-histidine","termid":"MOD:00049"},{"relation_name":"is_a","term_name":"adenosine diphosphoribosyl (ADP-ribosyl) modified residue","termid":"MOD:00752"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-tau-(ADP-ribosyl)diphthamide","synonyms":[{"name":"MOD_RES ADP-ribosyldiphthamide","type":"exact"}],"termid":"MOD:01145"}


id: PR:O36019
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg13 gene.","definition_xrefs":["UniProtKB:O36019","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy protein 13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.07c","synonyms":[{"name":"Spom972h-atg13","type":"exact"},{"name":"meiotically up-regulated gene 78 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O36019"}


id: GO:0015010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tetrahydrocorphins, tetrapyrroles that combine the structural elements of both porphyrins and corrins.","definition_xrefs":["Wikipedia:Morphine"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nickel-tetrapyrrole coenzyme metabolic process","termid":"GO:0015011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"tetrahydrocorphin metabolic process","synonyms":[{"name":"tetrahydrocorphin metabolism","type":"exact"}],"termid":"GO:0015010"}


id: GO:0033110
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Either of the two lipid bilayers surrounding a Cvt vesicle, a vesicle that functions in the cytoplasm-to-vacuole targeting (Cvt) pathway.","definition_xrefs":["PMID:20065092","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"part_of","term_name":"Cvt vesicle","termid":"GO:0033107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"Cvt vesicle membrane","synonyms":[{"name":"cytoplasm to vacuole targeting vesicle membrane","type":"exact"},{"name":"cytoplasm-to-vacuole targeting vesicle membrane","type":"exact"}],"termid":"GO:0033110"}


id: PATO:0001694
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A viscosity which relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"viscous","termid":"PATO:0000998"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased viscosity","synonyms":[{"name":"low viscosity","type":"exact"}],"termid":"PATO:0001694"}


id: FYPO:0006638
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortex of a cell is decreased, and the protein is instead detected distributed throughout the cell cortex. There may be little or no protein detected at the medial cortex.","definition_xrefs":["PomBase:mah","PMID:29930085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to medial cortex during vegetative growth","termid":"FYPO:0002557"},{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortex, with protein distributed in cell cortex, during vegetative growth","termid":"FYPO:0007405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to medial cortex, with protein distributed in cell cortex, during vegetative growth","synonyms":[{"name":"abolished protein localization to medial cortex, with protein distributed in cortex, during vegetative growth","type":"narrow"},{"name":"decreased protein localisation to medial cortex, with protein distributed in cell cortex, during vegetative growth","type":"exact"},{"name":"decreased protein localization to medial cortex during vegetative growth, with protein distributed in cell cortex","type":"exact"},{"name":"decreased protein localization to medial cortex, with protein distributed in cell cortex, during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to medial ring, with protein distributed in cell cortex, during vegetative growth","type":"exact"},{"name":"reduced protein localization to medial cortex, with protein distributed in cell cortex, during vegetative growth","type":"exact"}],"termid":"FYPO:0006638"}


id: PBO:0047738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III domain containing 3A","termid":"PBO:0047738"}


id: GO:1901425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a formic acid stimulus.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to formic acid","termid":"GO:1901425"}


id: PATO:0002184
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Cyclic cyclicity inheres in a molecule when the atoms of the molecule do contain at least one cycle in the atom-atom connection paths (through bonds).","definition_xrefs":["PATOC:JH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclicity","termid":"PATO:0002183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclic cyclicity","termid":"PATO:0002184"}


id: PBO:0027604
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_mitotic_spindle_pole_body_during_metaphase","termid":"PBO:0027604"}


id: GO:0046350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving galactosaminoglycans, any one of a group of polysaccharides that contain amino sugars derived from the galactose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan metabolic process","termid":"GO:0030203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"galactosaminoglycan metabolic process","synonyms":[{"name":"galactosaminoglycan metabolism","type":"exact"}],"termid":"GO:0046350"}


id: PATO:0000094
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000094 drug sensitivity (obsolete PATO:0000094)","termid":"PATO:0000094"}


id: PR:P40385
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rec6 gene.","definition_xrefs":["UniProtKB:P40385","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rec6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21B10.12","synonyms":[{"name":"Spom972h-rec6","type":"exact"}],"termid":"PR:P40385"}


id: PBO:0073866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member B1 pseudogene 2","termid":"PBO:0073866"}


id: PATO:0002530
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"obsolete episodic (obsolete PATO:0002530)","termid":"PATO:0002530"}


id: PBO:0086621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus","termid":"PBO:0086621"}


id: GO:1901582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of telomeric RNA transcription from RNA pol II promoter.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of telomeric RNA transcription from RNA pol II promoter (obsolete GO:1901582)","synonyms":[{"name":"activation of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"activation of telomeric RNA transcription from RNA pol II promoter","type":"narrow"},{"name":"positive regulation of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"up regulation of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"up regulation of telomeric RNA transcription from RNA pol II promoter","type":"exact"},{"name":"up-regulation of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"up-regulation of telomeric RNA transcription from RNA pol II promoter","type":"exact"},{"name":"upregulation of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"upregulation of telomeric RNA transcription from RNA pol II promoter","type":"exact"}],"termid":"GO:1901582"}


id: PBO:0055479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2912","termid":"PBO:0055479"}


id: PR:Q9UTL2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- klp8 gene.","definition_xrefs":["UniProtKB:Q9UTL2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.14","synonyms":[{"name":"Spom972h-klp8","type":"exact"}],"termid":"PR:Q9UTL2"}


id: GO:0042918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an alkanesulfonate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Alkanesulfonates are organic esters or salts of sulfonic acid containing an aliphatic hydrocarbon radical.","definition_xrefs":["PMID:31802112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"},{"relation_name":"is_a","term_name":"organic acid transmembrane transport","termid":"GO:1903825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"alkanesulfonate transmembrane transport","synonyms":[{"name":"alkanesulfonate transport","type":"broad"},{"name":"alkanesulphonate transport","type":"broad"}],"termid":"GO:0042918"}


id: GO:0001817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of a cytokine.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gene expression","termid":"GO:0010468"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of cytokine production","secondary_identifiers":["GO:0042035","GO:0050707"],"synonyms":[{"name":"regulation of cytokine anabolism","type":"exact"},{"name":"regulation of cytokine biosynthesis","type":"exact"},{"name":"regulation of cytokine biosynthetic process","type":"narrow"},{"name":"regulation of cytokine formation","type":"exact"},{"name":"regulation of cytokine secretion","type":"narrow"},{"name":"regulation of cytokine synthesis","type":"exact"}],"termid":"GO:0001817"}


id: GO:0070744
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is composed of an interleukin-27p28 subunit (product of the IL27 gene) and an EBI3 subunit and is secreted into the extracellular space.","definition_xrefs":["GOC:add","PMID:15999093","PMID:19161428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005576"],"is_obsolete":false,"name":"interleukin-27 complex","synonyms":[{"name":"EBI3","type":"narrow"},{"name":"IL-27 complex","type":"exact"},{"name":"IL27","type":"narrow"},{"name":"p28","type":"narrow"}],"termid":"GO:0070744"}


id: PBO:0052317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1143 pseudogene 1","termid":"PBO:0052317"}


id: PBO:0086490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative oxidoreductase, subunit of Coenzyme Q biosynthetic complexes; required for synthesis of wild-type levels of Coenzyme Q (ubiquinone); member of the short-chain dehydrogenase/reductase (SDR) superfamily; orthologous gene in some other fungi is fused to the COQ10 ortholog","termid":"PBO:0086490"}


id: PBO:0064113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin 1 like 3, transient receptor potential channel interacting","termid":"PBO:0064113"}


id: GO:0046654
data:
  {"annotated_genes":["SJAG_03275","SJAG_02225","SJAG_00106","SJAG_00815","SJAG_02408","SJAG_01198","SJAG_04156"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86365,100986,102126,109741,110123],"is_not":false,"summary":null,"term":"GO:0046654"},{"annotations":[108473,104397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009257"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tetrahydrofolate, 5,6,7,8-tetrahydrofolic acid, a folate derivative bearing additional hydrogens on the pterin group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid-containing compound biosynthetic process","termid":"GO:0009396"},{"relation_name":"is_a","term_name":"tetrahydrofolate metabolic process","termid":"GO:0046653"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00815":null,"SJAG_01198":null,"SJAG_02225":null,"SJAG_02408":null,"SJAG_03275":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0042559"}],"interesting_parent_ids":["GO:0008150","GO:0042559"],"is_obsolete":false,"name":"tetrahydrofolate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:FOLSYN-PWY"],"synonyms":[{"name":"tetrahydrofolate anabolism","type":"exact"},{"name":"tetrahydrofolate biosynthesis","type":"exact"},{"name":"tetrahydrofolate formation","type":"exact"},{"name":"tetrahydrofolate synthesis","type":"exact"}],"termid":"GO:0046654","terms_by_termid":{"GO:0009257":null,"GO:0046654":null}}


id: PBO:0000688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Seb1","termid":"PBO:0000688"}


id: GO:0044564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with a resultant blocking of a voltage-gated potassium channel, inhibiting the pore's activity, in the bitten/stung organism.","definition_xrefs":["GOC:fj","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in negative regulation of voltage-gated potassium channel activity in another organism","termid":"GO:0044562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in occlusion of the pore of voltage-gated potassium channel in another organism","synonyms":[{"name":"envenomation resulting in occlusion of the pore of voltage-gated potassium channel in other organism","type":"exact"}],"termid":"GO:0044564"}


id: GO:0038172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-33 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:jc","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interleukin-33-mediated signaling pathway","synonyms":[{"name":"IL-33-mediated signaling pathway","type":"exact"},{"name":"IL33 signaling pathway","type":"exact"},{"name":"interleukin-33 signaling pathway","type":"related"},{"name":"interleukin-33-mediated signalling pathway","type":"exact"}],"termid":"GO:0038172"}


id: PBO:0067363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 462, pseudogene","termid":"PBO:0067363"}


id: PBO:0078969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon CGA) 1-1","termid":"PBO:0078969"}


id: GO:0090011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in transcription of target genes that contribute to the formation of the primitive streak.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete Wnt signaling pathway involved in primitive streak formation (obsolete GO:0090011)","synonyms":[{"name":"Wnt receptor signaling pathway involved in primitive streak formation","type":"exact"},{"name":"Wnt receptor signalling pathway involved in primitive streak formation","type":"exact"},{"name":"Wnt-activated signaling pathway involved in primitive streak formation","type":"exact"}],"termid":"GO:0090011"}


id: GO:0060722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of the population in the embryonic placenta.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"embryonic placenta development","termid":"GO:0001892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation involved in embryonic placenta development","termid":"GO:0060722"}


id: PBO:0070599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 66","termid":"PBO:0070599"}


id: GO:0035274
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to diphenyl phthalate, C(20)H(14)O(4).","definition_xrefs":["PMID:34697989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"diphenyl phthalate binding","synonyms":[{"name":"DPP binding","type":"exact"}],"termid":"GO:0035274"}


id: PBO:0078936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCT) 4-1","termid":"PBO:0078936"}


id: PBO:0042273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 7 pseudogene 2","termid":"PBO:0042273"}


id: PBO:0058420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4789","termid":"PBO:0058420"}


id: GO:0006935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"taxis","termid":"GO:0042330"},{"relation_name":"part_of","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemotaxis","secondary_identifiers":["Wikipedia:Chemotaxis"],"synonyms":[{"name":"taxis in response to chemical stimulus","type":"exact"}],"termid":"GO:0006935"}


id: GO:1902611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a N-phenylthiourea stimulus.","definition_xrefs":["GOC:TermGenie","PMID:24006265","GOC:rjd","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to N-phenylthiourea","termid":"GO:1902610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to N-phenylthiourea","termid":"GO:1902611"}


id: PBO:0004830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin Kap123","termid":"PBO:0004830"}


id: PBO:0042797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEP250 antisense RNA 1","termid":"PBO:0042797"}


id: GO:0003357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an noradrenergic neuron, a neuron that secretes noradrenaline.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron differentiation","termid":"GO:0030182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"noradrenergic neuron differentiation","synonyms":[{"name":"norepinephrine secreting neuron differentiation","type":"exact"}],"termid":"GO:0003357"}


id: GO:1905161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a phagocytic vesicle.","definition_xrefs":["GOC:bf","GO_REF:0000087","PMID:23303671","GOC:TermGenie","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to phagocytic vesicle","synonyms":[{"name":"protein localisation in phagocytic vesicle","type":"exact"},{"name":"protein localisation to phagocytic vesicle","type":"exact"},{"name":"protein localisation to phagosome","type":"exact"},{"name":"protein localization in phagocytic vesicle","type":"exact"},{"name":"protein recruitment to phagosome","type":"exact"}],"termid":"GO:1905161"}


id: GO:0042688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a hemocyte precursor cell acquires the characteristics of a crystal cell, a class of cells that contain crystalline inclusions and are involved in the melanization of pathogenic material in the hemolymph.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemocyte differentiation","termid":"GO:0042386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"crystal cell differentiation","termid":"GO:0042688"}


id: MOD:01689
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a carboxyl-terminal residue to an alpha-carboxyl (1-carboxyl) methyl ester.","definition_xrefs":["Unimod:34#C-term","OMSSA:68","OMSSA:18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methylated residue","termid":"MOD:00393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"alpha-carboxyl methylated residue","synonyms":[{"name":"C1OMeRes","type":"exact"},{"name":"Methyl","type":"related"},{"name":"ctermpepmeester","type":"exact"},{"name":"ctermpepmethyl","type":"exact"}],"termid":"MOD:01689"}


id: GO:0033261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cell cycle process that modulates the rate or extent of the progression through the S phase of the cell cycle.","definition_xrefs":["GOC:mah","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of S phase (obsolete GO:0033261)","secondary_identifiers":["MetaCyc:SALVADEHYPOX-PWY","MetaCyc:SALVPURINE2-PWY","MetaCyc:PWY-5043"],"synonyms":[{"name":"regulation of S phase","type":"exact"},{"name":"regulation of S-phase","type":"exact"},{"name":"regulation of progression through S phase","type":"exact"}],"termid":"GO:0033261"}


id: PBO:0044252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CWC27 spliceosome associated cyclophilin","termid":"PBO:0044252"}


id: GO:0002015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that controls blood pressure by sensing the amount of stretch occurring in the atria.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart process","termid":"GO:0003015"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by baroreceptor feedback","termid":"GO:0003025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by atrial baroreceptor feedback","synonyms":[{"name":"atrial baroreceptor regulation of systemic arterial blood pressure","type":"exact"},{"name":"atrial control of blood pressure","type":"related"},{"name":"atrial low pressure baroreceptor regulation of blood pressure","type":"exact"},{"name":"atrial reflex","type":"related"}],"termid":"GO:0002015"}


id: PBO:0083204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene YJL020C/BBC1","termid":"PBO:0083204"}


id: PBO:0087646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Hap2p/3p/4p/5p CCAAT-binding complex; complex is heme-activated and glucose-repressed; complex is a transcriptional activator and global regulator of respiratory gene expression; contains sequences contributing to both complex assembly and DNA binding","termid":"PBO:0087646"}


id: PBO:0038762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR3B pseudogene 7","termid":"PBO:0038762"}


id: GO:0030488
data:
  {"annotated_genes":["SJAG_02352","SJAG_01375","SJAG_04848","SJAG_04367","SJAG_00255","SJAG_04736","SJAG_01314","SJAG_00499","SJAG_02099","SJAG_04993","SJAG_02042","SJAG_04649","SJAG_04453","SJAG_05249","SJAG_02386","SJAG_04181","SJAG_00886","SJAG_05334","SJAG_02637","SJAG_04680","SJAG_00325","SJAG_01261","SJAG_02302","SJAG_01269","SJAG_03367","SJAG_04890","SJAG_04735"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84644,86514,86994,88849,89986,90757,92283,93910,94131,94138,97027,98953,101974,104530,108210,110887,114035],"is_not":false,"summary":null,"term":"GO:0030488"},{"annotations":[97434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070901"},{"annotations":[58451,111781,115051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106004"},{"annotations":[102815,106211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106217"},{"annotations":[101826,86513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002946"},{"annotations":[95466,97435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002939"},{"annotations":[100200,103322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002940"},{"annotations":[110888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002128"},{"annotations":[84333,89987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002127"},{"annotations":[98954,93911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002130"}]},"cv_name":"biological_process","definition":"The posttranscriptional addition of methyl groups to specific residues in a tRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA methylation","termid":"GO:0001510"},{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00255":null,"SJAG_00325":null,"SJAG_00499":null,"SJAG_00886":null,"SJAG_01261":null,"SJAG_01269":null,"SJAG_01314":null,"SJAG_01375":null,"SJAG_02042":null,"SJAG_02099":null,"SJAG_02302":null,"SJAG_02352":null,"SJAG_02386":null,"SJAG_02637":null,"SJAG_03367":null,"SJAG_04181":null,"SJAG_04367":null,"SJAG_04453":null,"SJAG_04649":null,"SJAG_04680":null,"SJAG_04735":null,"SJAG_04736":null,"SJAG_04848":null,"SJAG_04890":null,"SJAG_04993":null,"SJAG_05249":null,"SJAG_05334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"tRNA methylation","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0030488","terms_by_termid":{"GO:0002127":null,"GO:0002128":null,"GO:0002130":null,"GO:0002939":null,"GO:0002940":null,"GO:0002946":null,"GO:0030488":null,"GO:0070901":null,"GO:0106004":null,"GO:0106217":null}}


id: PBO:0090760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GAP Gyp1","termid":"PBO:0090760"}


id: SO:0000993
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence produced from an aligment algorithm that uses multiple sequences as input.","direct_ancestors":[{"relation_name":"is_a","term_name":"status","termid":"SO:0000905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"consensus","termid":"SO:0000993"}


id: PR:Q9Y820
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pci2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCI domain-containing protein C1105.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1105.07c","synonyms":[{"name":"Spom972h-pci2","type":"exact"}],"termid":"PR:Q9Y820"}


id: PBO:0003681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein trafficking protein Pga2 (predicted)","termid":"PBO:0003681"}


id: PBO:0085716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in SRP-independent targeting of substrates to the ER; component of an alternative ER targeting pathway that has partial functional redundancy with the GET pathway; preference for substrates with downstream transmembrane domains; interacts with Env10p/Snd2p and Pho88p/Snd3p; can compensate for loss of SRP; co-purifies with ribosomes; GFP-fusion protein localizes to the cytoplasm","termid":"PBO:0085716"}


id: PR:Q9Y7U0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eis1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7U0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C63.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC63.14","synonyms":[{"name":"Spom972h-eis1","type":"exact"}],"termid":"PR:Q9Y7U0"}


id: PBO:0017470
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ends_after","termid":"PBO:0017470"}


id: PBO:0065688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pituitary tumor-transforming 4 pseudogene","termid":"PBO:0065688"}


id: GO:0061043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels and contribute to the series of events that restore integrity to damaged vasculature.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of angiogenesis","termid":"GO:0045765"},{"relation_name":"is_a","term_name":"regulation of wound healing","termid":"GO:0061041"},{"relation_name":"regulates","term_name":"vascular wound healing","termid":"GO:0061042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular wound healing","termid":"GO:0061043"}


id: FYPO:0002562
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the actomyosin contractile ring begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to actomyosin contractile ring","termid":"FYPO:0002560"},{"relation_name":"is_a","term_name":"delayed onset of protein localization to cell division site","termid":"FYPO:0003946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0000032","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"delayed onset of protein localization to actomyosin contractile ring","synonyms":[{"name":"delayed onset of protein localisation to actomyosin contractile ring","type":"exact"},{"name":"delayed onset of protein localization to actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein localization to actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"delayed onset of protein localization to actomyosin contractile ring involved in mitotic cytokinesis","type":"exact"},{"name":"delayed onset of protein localization to contractile ring","type":"exact"},{"name":"delayed onset of protein localization to cytokinetic contractile ring","type":"exact"},{"name":"delayed onset of protein localization to mitotic contractile ring","type":"exact"},{"name":"delayed onset of protein recruitment to actomyosin contractile ring","type":"related"},{"name":"delayed protein localization to actomyosin contractile ring","type":"exact"}],"termid":"FYPO:0002562"}


id: GO:1900526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of phosphatidylserine biosynthetic process by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:TermGenie","GOC:dgf","PMID:8056324"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phosphatidylserine biosynthetic process by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900526)","synonyms":[{"name":"negative regulation of phosphatidylserine anabolism by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of phosphatidylserine biosynthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of phosphatidylserine formation by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of phosphatidylserine synthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900526"}


id: SO:0001504
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome variation derived from an event during meiosis.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_variation","termid":"SO:0000240"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assortment_derived_variation","synonyms":[{"name":"assortment derived variation","type":"related"}],"termid":"SO:0001504"}


id: PATO:0001217
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001217 energy_unit (obsolete PATO:0001217)","termid":"PATO:0001217"}


id: GO:0000136
data:
  {"annotated_genes":["SJAG_00816","SJAG_04095","SJAG_01276","SJAG_03555","SJAG_04770"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[108757],"is_not":false,"summary":null,"term":"GO:0000136"},{"annotations":[83578,100992,93947,114107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140497"}]},"cv_name":"cellular_component","definition":"A protein complex with alpha-(1->6)-mannosyltransferase activity, located in the cis Golgi membrane; adds mannan to N-linked glycans on proteins.","definition_xrefs":["PMID:10037752","GOC:mcc","PMID:11095735","PMID:18083825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase complex","termid":"GO:0031501"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"Golgi cis cisterna","termid":"GO:0000137"},{"relation_name":"part_of","term_name":"Golgi membrane","termid":"GO:0000139"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00816":null,"SJAG_01276":null,"SJAG_03555":null,"SJAG_04095":null,"SJAG_04770":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005794","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"mannan polymerase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"alpha-1,6-mannosyltransferase complex","type":"exact"}],"termid":"GO:0000136","terms_by_termid":{"GO:0000136":null,"GO:0140497":null}}


id: SO:1000132
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The effect of a change in nucleotide sequence.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000132 sequence_variant_effect (obsolete SO:1000132)","synonyms":[{"name":"sequence variant effect","type":"related"}],"termid":"SO:1000132"}


id: PBO:0058428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4798","termid":"PBO:0058428"}


id: GO:0005220
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a channel that opens when inositol 1,4,5-trisphosphate (IP3) has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["PMID:28416699","GOC:signaling","GOC:mah","Wikipedia:Inositol_trisphosphate_receptor","PMID:8660280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly gated calcium channel activity","termid":"GO:0015278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"inositol 1,4,5-trisphosphate-gated calcium channel activity","secondary_identifiers":["GO:0008095"],"synonyms":[{"name":"IP3 receptor activity","type":"exact"},{"name":"InsP3 receptor","type":"exact"},{"name":"inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity","type":"exact"},{"name":"inositol-1,4,5-trisphosphate receptor activity","type":"exact"}],"termid":"GO:0005220"}


id: SO:0000707
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The 5' five prime splice site region of the donor RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans_splice_site","termid":"SO:0001420"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans_splice_donor_site","synonyms":[{"name":"5 prime trans splice site","type":"related"},{"name":"trans splice donor site","type":"exact"},{"name":"trans-splice donor site","type":"exact"}],"termid":"SO:0000707"}


id: PBO:0060539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuron navigator 1","termid":"PBO:0060539"}


id: PBO:0074929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 96B","termid":"PBO:0074929"}


id: PBO:0079035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon AAC) 4-1","termid":"PBO:0079035"}


id: GO:1900185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of xanthone-containing compound biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of xanthone-containing compound biosynthetic process","termid":"GO:1900183"},{"relation_name":"positively_regulates","term_name":"xanthone-containing compound biosynthetic process","termid":"GO:2001307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of xanthone-containing compound biosynthetic process","synonyms":[{"name":"activation of xanthone biosynthesis","type":"narrow"},{"name":"activation of xanthone biosynthetic process","type":"narrow"},{"name":"activation of xanthone-containing compound anabolism","type":"exact"},{"name":"activation of xanthone-containing compound biosynthesis","type":"exact"},{"name":"activation of xanthone-containing compound biosynthetic process","type":"narrow"},{"name":"activation of xanthone-containing compound formation","type":"exact"},{"name":"activation of xanthone-containing compound synthesis","type":"exact"},{"name":"positive regulation of xanthone biosynthesis","type":"narrow"},{"name":"positive regulation of xanthone biosynthetic process","type":"narrow"},{"name":"positive regulation of xanthone-containing compound anabolism","type":"exact"},{"name":"positive regulation of xanthone-containing compound biosynthesis","type":"exact"},{"name":"positive regulation of xanthone-containing compound formation","type":"exact"},{"name":"positive regulation of xanthone-containing compound synthesis","type":"exact"},{"name":"up regulation of xanthone biosynthesis","type":"narrow"},{"name":"up regulation of xanthone biosynthetic process","type":"narrow"},{"name":"up regulation of xanthone-containing compound anabolism","type":"exact"},{"name":"up regulation of xanthone-containing compound biosynthesis","type":"exact"},{"name":"up regulation of xanthone-containing compound biosynthetic process","type":"exact"},{"name":"up regulation of xanthone-containing compound formation","type":"exact"},{"name":"up regulation of xanthone-containing compound synthesis","type":"exact"},{"name":"up-regulation of xanthone biosynthesis","type":"narrow"},{"name":"up-regulation of xanthone biosynthetic process","type":"narrow"},{"name":"up-regulation of xanthone-containing compound anabolism","type":"exact"},{"name":"up-regulation of xanthone-containing compound biosynthesis","type":"exact"},{"name":"up-regulation of xanthone-containing compound biosynthetic process","type":"exact"},{"name":"up-regulation of xanthone-containing compound formation","type":"exact"},{"name":"up-regulation of xanthone-containing compound synthesis","type":"exact"},{"name":"upregulation of xanthone biosynthesis","type":"narrow"},{"name":"upregulation of xanthone biosynthetic process","type":"narrow"},{"name":"upregulation of xanthone-containing compound anabolism","type":"exact"},{"name":"upregulation of xanthone-containing compound biosynthesis","type":"exact"},{"name":"upregulation of xanthone-containing compound biosynthetic process","type":"exact"},{"name":"upregulation of xanthone-containing compound formation","type":"exact"},{"name":"upregulation of xanthone-containing compound synthesis","type":"exact"}],"termid":"GO:1900185"}


id: GO:0140708
data:
  {"annotated_genes":["SJAG_01074"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110473],"is_not":false,"summary":null,"term":"GO:0140708"}]},"cv_name":"biological_process","definition":"The C-terminal elongation of 60S-anchored stalled nascent polypeptide chains with untemplated alanine and threonine tails (CAT tails). CAT tails participate in the recognition of stalled nascent chains by the ribosome quality control system.","definition_xrefs":["PMID:32934225","PMID:25554787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic translational elongation","termid":"GO:0002182"},{"relation_name":"part_of","term_name":"rescue of stalled ribosome","termid":"GO:0072344"},{"relation_name":"part_of","term_name":"ribosome-associated ubiquitin-dependent protein catabolic process","termid":"GO:1990116"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01074":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"part_of","termid":"GO:0002181"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0002181","GO:0030163"],"is_obsolete":false,"name":"CAT tailing","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140708","terms_by_termid":{"GO:0140708":null}}


id: GO:0005710
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A chromosome found in the cell during metaphase. Typically, sister chromatids are held together at their centromeres and chromosomes are covered with a large number of molecules, including ribonucleoproteins.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete metaphase chromosome (obsolete GO:0005710)","synonyms":[{"name":"metaphase chromosome","type":"exact"}],"termid":"GO:0005710"}


id: GO:0007265
data:
  {"annotated_genes":["SJAG_00329","SJAG_02379"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107424],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0046580"},{"annotations":[87213],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0046579"}]},"cv_name":"biological_process","definition":"An intracellular signaling cassette in which a small monomeric GTPase of the Ras subfamily relays a signal.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small GTPase-mediated signal transduction","termid":"GO:0007264"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00329":null,"SJAG_02379":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Ras protein signal transduction","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Ras mediated signal transduction","type":"exact"}],"termid":"GO:0007265","terms_by_termid":{"GO:0046579":null,"GO:0046580":null}}


id: GO:0002059
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to thymine.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase binding","termid":"GO:0002061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"thymine binding","termid":"GO:0002059"}


id: PBO:0081739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 670","termid":"PBO:0081739"}


id: GO:0033648
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Organized structure of distinctive morphology and function, as found in host cells, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular organelle","termid":"GO:0033647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host intracellular membrane-bounded organelle","synonyms":[{"name":"host intracellular membrane-enclosed organelle","type":"exact"}],"termid":"GO:0033648"}


id: PBO:0004792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Cwf10 (predicted)","termid":"PBO:0004792"}


id: GO:0002754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a ligand to an intracellular vesicle pattern recognition receptor (PRR). PRRs bind pathogen-associated molecular pattern (PAMPs), structures conserved among microbial species.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:15199967","GOC:ar"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0002753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"endosomal pattern recognition receptor signaling pathway","synonyms":[{"name":"intracellular endosomal pattern recognition receptor signaling pathway","type":"exact"},{"name":"intracellular vesicle PAMP receptor signaling pathway","type":"related"},{"name":"intracellular vesicle PRR signaling pathway","type":"related"},{"name":"intracellular vesicle pathogen receptor signaling pathway","type":"related"},{"name":"intracellular vesicle pattern recognition receptor signaling pathway","type":"related"},{"name":"intracellular vesicle pattern recognition receptor signalling pathway","type":"related"}],"termid":"GO:0002754"}


id: PBO:0073490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shugoshin 2","termid":"PBO:0073490"}


id: PBO:0041830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CASC3 exon junction complex subunit","termid":"PBO:0041830"}


id: FYPO:0005302
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during the G2 phase of the mitotic cell cycle is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased RNA level during mitotic G2 phase","synonyms":[{"name":"decreased RNA accumulation during mitotic G2 phase","type":"related"},{"name":"decreased RNA level during G2 phase during mitotic cell cycle","type":"exact"},{"name":"decreased RNA level during mitotic G2 phase during vegetative growth","type":"exact"},{"name":"decreased transcript level during mitotic G2 phase","type":"exact"},{"name":"reduced RNA level during mitotic G2 phase","type":"exact"}],"termid":"FYPO:0005302"}


id: GO:1990522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the nematode tail spike is generated and organized. An example of this process is seen in C. elegans, where the tapered tail spike is formed during embryogenesis by a filamentous process that passes posteriorly through hyp10, the tail ventral hypodermis; the filamentous process is formed by a binucleate cell, the tail-spike cell, that subsequently undergoes programmed cell death.","definition_xrefs":["GOC:kmv","PMID:6684600","PMID:17329362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tail spike morphogenesis","secondary_identifiers":["WBbt:0008072","WBbt:0006979"],"termid":"GO:1990522"}


id: GO:0051499
data:
  {"annotated_genes":["SJAG_01248"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051500"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-aminoacyl-tRNA = D-amino acid + tRNA. Hydrolysis of the removal of D-amino acids from residues in charged tRNA.","definition_xrefs":["PMID:14527667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA editing activity","termid":"GO:0002161"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01248":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0140098","GO:0003824","GO:0140101","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"D-aminoacyl-tRNA deacylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-15041","RHEA:13953","EC:3.1.1.96"],"termid":"GO:0051499","terms_by_termid":{"GO:0051500":null}}


id: PR:O13886
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC823.02 gene.","definition_xrefs":["UniProtKB:O13886","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C823.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.02","synonyms":[{"name":"Spom972h-SPAC823.02","type":"exact"}],"termid":"PR:O13886"}


id: GO:0098950
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic early endosome membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of postsynaptic early endosome membrane (obsolete GO:0098950)","synonyms":[{"name":"intrinsic to postsynaptic early endosome membrane","type":"narrow"}],"termid":"GO:0098950"}


id: GO:0106173
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of a COPII-coated endocytic vesicle.","definition_xrefs":["PMID:21172817","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"COPII-coated vesicle lumen","termid":"GO:0106173"}


id: GO:1905292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neural crest cell differentiation.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:TermGenie","GO_REF:0000058","PMID:15073157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stem cell differentiation","termid":"GO:2000736"},{"relation_name":"regulates","term_name":"neural crest cell differentiation","termid":"GO:0014033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neural crest cell differentiation","termid":"GO:1905292"}


id: GO:0046905
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 geranylgeranyl diphosphate -> 15-cis-phytoene + 2 diphosphate.","definition_xrefs":["GOC:ai","PMID:12641468","RHEA:34479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"15-cis-phytoene synthase activity","synonyms":[{"name":"phytoene synthase activity","type":"broad"}],"termid":"GO:0046905"}


id: PBO:0063795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 23","termid":"PBO:0063795"}


id: PBO:0062150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 29","termid":"PBO:0062150"}


id: GO:0010032
data:
  {"annotated_genes":["SJAG_03161"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108109],"is_not":false,"summary":null,"term":"GO:0010032"}]},"cv_name":"biological_process","definition":"Compaction of chromatin structure prior to meiosis in eukaryotic cells.","definition_xrefs":["PMID:10072401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome condensation","termid":"GO:0030261"},{"relation_name":"is_a","term_name":"chromosome organization involved in meiotic cell cycle","termid":"GO:0070192"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03161":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"meiotic chromosome condensation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"chromosome condensation involved in meiotic cell cycle","type":"exact"}],"termid":"GO:0010032","terms_by_termid":{"GO:0010032":null}}


id: GO:1903873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of DNA recombinase mediator complex assembly.","definition_xrefs":["PMID:18347097","GO_REF:0000058","GOC:rb","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of DNA recombinase mediator complex assembly","termid":"GO:1903872"},{"relation_name":"negatively_regulates","term_name":"DNA recombinase mediator complex assembly","termid":"GO:1903871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"negative regulation of DNA recombinase mediator complex assembly","synonyms":[{"name":"down regulation of DNA recombinase mediator complex assembly","type":"exact"},{"name":"down regulation of DNA recombinase mediator complex formation","type":"exact"},{"name":"down-regulation of DNA recombinase mediator complex assembly","type":"exact"},{"name":"down-regulation of DNA recombinase mediator complex formation","type":"exact"},{"name":"downregulation of DNA recombinase mediator complex assembly","type":"exact"},{"name":"downregulation of DNA recombinase mediator complex formation","type":"exact"},{"name":"inhibition of DNA recombinase mediator complex assembly","type":"narrow"},{"name":"inhibition of DNA recombinase mediator complex formation","type":"narrow"},{"name":"negative regulation of DNA recombinase mediator complex formation","type":"exact"}],"termid":"GO:1903873"}


id: GO:0033758
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: deoxyamidinoproclavaminate + 2-oxoglutarate + O2 = amidinoproclavaminate + succinate + CO2 + H2O; proclavaminate + 2-oxoglutarate + O2 = dihydroclavaminate + succinate + CO2 + 2 H2O; and dihydroclavaminate + 2-oxoglutarate + O2 = clavaminate + succinate + CO2 + 2 H2O.","definition_xrefs":["EC:1.14.11.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"clavaminate synthase activity","secondary_identifiers":["RHEA:20021","MetaCyc:1.14.11.21-RXN"],"synonyms":[{"name":"clavaminate synthase 2 activity","type":"narrow"},{"name":"clavaminic acid synthase activity","type":"related"},{"name":"deoxyamidinoproclavaminate,2-oxoglutarate:oxygen oxidoreductase (3-hydroxylating) activity","type":"related"}],"termid":"GO:0033758"}


id: GO:0015562
data:
  {"annotated_genes":["SJAG_01183","SJAG_03899"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080139"},{"annotations":[92088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034639"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a specific substance or related group of substances from the inside of the cell to the outside of the cell across a membrane.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01183":null,"SJAG_03899":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"efflux transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"efflux permease activity","type":"exact"},{"name":"efflux transporter activity","type":"exact"},{"name":"monocarboxylate (lactate, pyruvate, mevalonate) uptake/efflux porter activity","type":"related"}],"termid":"GO:0015562","terms_by_termid":{"GO:0034639":null,"GO:0080139":null}}


id: PBO:0051986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Janus kinase 2","termid":"PBO:0051986"}


id: PBO:0054480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1880","termid":"PBO:0054480"}


id: PBO:0002857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Srb6","termid":"PBO:0002857"}


id: GO:0150144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of CD80 biosynthetic process.","definition_xrefs":["GOC:aruk","PMID:26936882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glycoprotein biosynthetic process","termid":"GO:0010561"},{"relation_name":"is_a","term_name":"regulation of CD80 production","termid":"GO:0150143"},{"relation_name":"negatively_regulates","term_name":"CD80 biosynthetic process","termid":"GO:0035780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of CD80 production","synonyms":[{"name":"negative regulation of CD80 biosynthetic process","type":"exact"}],"termid":"GO:0150144"}


id: PBO:0090532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLI interacting factor family phosphatase","termid":"PBO:0090532"}


id: FYPO:0001174
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing sucrose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002058","FYPO:0002060","FYPO:0000003","FYPO:0002057","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on sucrose carbon source","synonyms":[{"name":"normal cell population growth on sucrose carbon source","type":"exact"},{"name":"normal vegetative cell population growth on sucrose carbon source","type":"exact"}],"termid":"FYPO:0001174"}


id: GO:0071578
data:
  {"annotated_genes":["SJAG_02968","SJAG_04185"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100238,109277],"is_not":false,"summary":null,"term":"GO:0071578"}]},"cv_name":"biological_process","definition":"The directed movement of zinc(2+) ions from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:18637840","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion transmembrane transport","termid":"GO:0071577"},{"relation_name":"is_a","term_name":"inorganic cation import across plasma membrane","termid":"GO:0098659"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02968":null,"SJAG_04185":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"zinc ion import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0006831","GO:0140160","GO:0006830","GO:0044749"],"synonyms":[{"name":"high-affinity zinc II ion transmembrane import","type":"narrow"},{"name":"high-affinity zinc II ion transport","type":"narrow"},{"name":"low-affinity zinc II ion transport","type":"narrow"},{"name":"zinc II ion plasma membrane import","type":"exact"},{"name":"zinc II ion transmembrane import","type":"exact"},{"name":"zinc import","type":"exact"},{"name":"zinc ion import into cell","type":"exact"},{"name":"zinc ion transmembrane import","type":"related"},{"name":"zinc uptake","type":"exact"}],"termid":"GO:0071578","terms_by_termid":{"GO:0071578":null}}


id: PBO:0044249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CWC15 spliceosome associated protein homolog","termid":"PBO:0044249"}


id: FYPO:0006114
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during S phase of the mitotic cell cycle is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased protein level during mitotic S phase","synonyms":[{"name":"increased protein accumulation during mitotic S phase","type":"related"},{"name":"increased protein level during S phase of mitotic cell cycle","type":"related"},{"name":"increased protein level during mitotic S phase during vegetative growth","type":"exact"}],"termid":"FYPO:0006114"}


id: GO:1900196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of penicillin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of penicillin metabolic process","termid":"GO:0033244"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"penicillin biosynthetic process","termid":"GO:0042318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of penicillin biosynthetic process","synonyms":[{"name":"regulation of penicillin anabolism","type":"exact"},{"name":"regulation of penicillin biosynthesis","type":"exact"},{"name":"regulation of penicillin formation","type":"exact"},{"name":"regulation of penicillin synthesis","type":"exact"}],"termid":"GO:1900196"}


id: GO:0060192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of lipase activity, the hydrolysis of a lipid or phospholipid.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hydrolase activity","termid":"GO:0051346"},{"relation_name":"is_a","term_name":"regulation of lipase activity","termid":"GO:0060191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipase activity","termid":"GO:0060192"}


id: GO:0061744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific neuromuscular movement of a single organism in response to external or internal stimuli.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:25318560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"motor behavior","termid":"GO:0061744"}


id: PBO:0004734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA R68 (predicted)","termid":"PBO:0004734"}


id: GO:0180036
data:
  {"annotated_genes":["SJAG_02622"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114172],"is_not":false,"summary":null,"term":"GO:0180036"}]},"cv_name":"biological_process","definition":"A process that identifies and degrades defective or aberrant lncRNAs within the nucleus.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear RNA surveillance","termid":"GO:0071027"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nuclear lncRNA surveillance","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180036","terms_by_termid":{"GO:0180036":null}}


id: PBO:0063879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class H","termid":"PBO:0063879"}


id: GO:0033373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protease is maintained in a secretory granule in a mast cell and prevented from moving elsewhere.","definition_xrefs":["GOC:mah","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein location in mast cell secretory granule","termid":"GO:0033370"},{"relation_name":"part_of","term_name":"protease localization to mast cell secretory granule","termid":"GO:0033368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of protease location in mast cell secretory granule","synonyms":[{"name":"maintenance of protease localization in mast cell secretory granule","type":"related"},{"name":"mast cell protease retention","type":"exact"}],"termid":"GO:0033373"}


id: GO:0070171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of tooth mineralization, the deposition of calcium salts in tooth structures.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biomineral tissue development","termid":"GO:0070168"},{"relation_name":"is_a","term_name":"regulation of tooth mineralization","termid":"GO:0070170"},{"relation_name":"negatively_regulates","term_name":"tooth mineralization","termid":"GO:0034505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tooth mineralization","termid":"GO:0070171"}


id: GO:1990317
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex involved in septin ring formation during mitosis. In Saccharomyces cerevisiae it consists of BNI5, CDC3, CDC10, CDC11, CDC12, GIN4, NAP1 and SHS1. At least 2 GIN4 molecules are involved.","definition_xrefs":["GOC:bhm","PMID:12058072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine/threonine protein kinase complex","termid":"GO:1902554"},{"relation_name":"part_of","term_name":"cellular bud neck septin ring","termid":"GO:0000144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005938","GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"Gin4 complex","synonyms":[{"name":"Gin4-septin complex","type":"exact"}],"termid":"GO:1990317"}


id: PBO:0064178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XE, pseudogene","termid":"PBO:0064178"}


id: GO:0032199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The synthesis of DNA from an RNA transposon intermediate.","definition_xrefs":["ISBN:1555812090","GOC:txnOH","GOC:jp"],"gene_count":0,"genotype_count":0,"name":"obsolete reverse transcription involved in RNA-mediated transposition (obsolete GO:0032199)","synonyms":[{"name":"reverse transcription during retrotransposition","type":"exact"}],"termid":"GO:0032199"}


id: PR:O94647
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk24 gene.","definition_xrefs":["UniProtKB:O94647","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk24, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21.07c","synonyms":[{"name":"Spom972h-ppk24","type":"exact"},{"name":"meiotically up-regulated gene 29 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94647"}


id: PBO:0069734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1015, pseudogene","termid":"PBO:0069734"}


id: PBO:0044860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEK proto-oncogene","termid":"PBO:0044860"}


id: PBO:0000716
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target genes transcriptionally co-regulated by Cdk9","termid":"PBO:0000716"}


id: PBO:0045864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EEF1A lysine methyltransferase 3","termid":"PBO:0045864"}


id: PBO:0043404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CKLF like MARVEL transmembrane domain containing 1","termid":"PBO:0043404"}


id: GO:0033800
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + a 7-hydroxyisoflavone = S-adenosyl-L-homocysteine + a 7-methoxyisoflavone.","definition_xrefs":["EC:2.1.1.150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"isoflavone 7-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-6241","RHEA:17933"],"synonyms":[{"name":"S-adenosyl-L-methionine:hydroxyisoflavone 7-O-methyltransferase activity","type":"related"}],"termid":"GO:0033800"}


id: PATO:0000504
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A rhythm quality inhering in a bearer by virtue of the bearer's lacking rhythm.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhythm quality","termid":"PATO:0000078"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrhythmic","termid":"PATO:0000504"}


id: PR:Q10148
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tls1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1D4.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.01","synonyms":[{"name":"Spom972h-tls1","type":"exact"}],"termid":"PR:Q10148"}


id: PBO:0067040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 57, pseudogene","termid":"PBO:0067040"}


id: GO:0005776
data:
  {"annotated_genes":["SJAG_04655","SJAG_01274","SJAG_03100","SJAG_01382","SJAG_04232","SJAG_01135","SJAG_02699","SJAG_02414","SJAG_06309"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71637,90677,93932,95752,99648,100869,113875],"is_not":false,"summary":null,"term":"GO:0005776"},{"annotations":[86139,109702],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000421"}]},"cv_name":"cellular_component","definition":"A double-membrane-bounded compartment that engulfs endogenous cellular material as well as invading microorganisms to target them to the lytic vacuole/lysosome for degradation as part of macroautophagy.","definition_xrefs":["ISBN:0198547684","PMID:11099404","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuole","termid":"GO:0005773"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01135":null,"SJAG_01274":null,"SJAG_01382":null,"SJAG_02414":null,"SJAG_02699":null,"SJAG_03100":null,"SJAG_04232":null,"SJAG_04655":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005773","GO:0005737"],"is_obsolete":false,"name":"autophagosome","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao8663416959"],"synonyms":[{"name":"autophagic vacuole","type":"exact"},{"name":"initial autophagic vacuole","type":"related"}],"termid":"GO:0005776","terms_by_termid":{"GO:0000421":null,"GO:0005776":null}}


id: PBO:0053546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 552","termid":"PBO:0053546"}


id: PBO:0074731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 89","termid":"PBO:0074731"}


id: PBO:0060885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolus and neural progenitor protein","termid":"PBO:0060885"}


id: PBO:0036327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine-containing RNA endoribonuclease (predicted)","termid":"PBO:0036327"}


id: PR:Q9P7M8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nup184 gene.","definition_xrefs":["UniProtKB:Q9P7M8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup184 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP27G11.10c","synonyms":[{"name":"Spom972h-nup184","type":"exact"},{"name":"nuclear pore protein nup184 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7M8"}


id: GO:0160064
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that mediates the insertion of multi-pass transmembrane proteins into endoplasmic reticulum (ER) membrane. Substrates enter via the lateral gate of the Sec61 translocon. The complex comprises the GEL subcomplex (composed of RAB5IF/OPTI and TMCO1), the BOS subcomplex (composed of NCLN/Nicalin, NOMO and TMEM147) and the PAT subcomplex (composed of WDR83OS/Asterix and CCDC47).","definition_xrefs":["PMID:36261528","PMID:36261522"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER membrane insertion complex","termid":"GO:0072379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575","GO:0005829"],"is_obsolete":false,"name":"multi-pass translocon complex","synonyms":[{"name":"MPT complex","type":"exact"},{"name":"TMCO1 translocon","type":"related"}],"termid":"GO:0160064"}


id: GO:0102358
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydroxycoumarin + S-adenosyl-L-methionine = 7-hydroxy-8-methoxycoumarin + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:68960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"daphnetin-8-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13448"],"termid":"GO:0102358"}


id: SO:0000071
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a gene when it is located within the intron of another gene and on the same strand.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inside_intron","termid":"SO:0000069"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inside_intron_parallel","synonyms":[{"name":"inside intron parallel","type":"exact"}],"termid":"SO:0000071"}


id: GO:2001090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a maltotriuloseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisaccharide transport","termid":"GO:2001088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"maltotriulose transport","termid":"GO:2001090"}


id: GO:0097416
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cytoplasmic inclusion found in neurons. It consists of filaments and granular materials, exhibits a dense core with a rough peripheral halo and lacks a limiting membrane. The filaments of these inclusions are composed of approximately 15-25 nm granule-coated fibrils in association with normal 10-nm neurofilaments.","definition_xrefs":["NIF_Subcellular:nlx_subcell_20090105","PMID:18026741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body","termid":"GO:0016234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Lewy body-like hyaline inclusion","synonyms":[{"name":"LBHI","type":"exact"}],"termid":"GO:0097416"}


id: PBO:0057614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1180","termid":"PBO:0057614"}


id: GO:0102984
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sulfonatoacetaldehyde + H2O + NAD = sulfonatoacetate + NADH + 2 H+.","definition_xrefs":["EC:1.2.1.73","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"sulfoacetaldehyde dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-9592","RHEA:25637"],"termid":"GO:0102984"}


id: PBO:0053362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 269","termid":"PBO:0053362"}


id: PBO:0067560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 713, pseudogene","termid":"PBO:0067560"}


id: PomGeneEx:0000003
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneEx","definition":"A gene expression qualifier that indicates that an RNA or protein is present at a lower level or produced at a slower rate under one set of conditions or at one indicated time than otherwise.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression qualifier","termid":"PomGeneEx:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased","synonyms":[{"name":"gene expression decreased","type":"exact"},{"name":"gene product level decreased","type":"exact"}],"termid":"PomGeneEx:0000003"}


id: PBO:0084924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Monomeric glyoxalase I; catalyzes the detoxification of methylglyoxal (a by-product of glycolysis) via condensation with glutathione to produce S-D-lactoylglutathione; required for full activity of O-acetyl homoserine sulfhydrylase, Met17p; expression regulated by methylglyoxal levels and osmotic stress","termid":"PBO:0084924"}


id: PR:000044741
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An E3 ubiquitin-protein ligase dma1 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"E3 ubiquitin-protein ligase dma1","termid":"PR:000027845"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase dma1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC17G8.10c","synonyms":[{"name":"Spom-dma1","type":"exact"}],"termid":"PR:000044741"}


id: PBO:0066735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 32","termid":"PBO:0066735"}


id: PBO:0043652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 8 pseudogene 2","termid":"PBO:0043652"}


id: PBO:0085145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar S-adenosylmethionine-dependent rRNA methyltransferase; methylates adenine (m1A) of large subunit (LSU) rRNA at position 645; involved in pre-rRNA cleavage at site A2; mutation is synthetically lethal with gar1 mutation; deletion disrupts telomere maintenance by influencing expression of neighboring gene STN1; mammalian homolog nucleomethylin has been linked to nutrient availability signaling pathways and obesity","termid":"PBO:0085145"}


id: PR:Q09175
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- krp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dibasic-processing endoprotease (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.09c","synonyms":[{"name":"KEX2-related protease (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-krp1","type":"exact"}],"termid":"PR:Q09175"}


id: GO:1900091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of raffinose biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:22307851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate biosynthetic process","termid":"GO:0043255"},{"relation_name":"is_a","term_name":"regulation of raffinose metabolic process","termid":"GO:0080091"},{"relation_name":"regulates","term_name":"raffinose biosynthetic process","termid":"GO:0033529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of raffinose biosynthetic process","synonyms":[{"name":"regulation of raffinose anabolism","type":"exact"},{"name":"regulation of raffinose biosynthesis","type":"exact"},{"name":"regulation of raffinose formation","type":"exact"},{"name":"regulation of raffinose synthesis","type":"exact"}],"termid":"GO:1900091"}


id: PR:Q9P3E5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC750.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3E5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0494 membrane protein C750.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC750.06c","synonyms":[{"name":"Spom972h-SPAC750.06c","type":"exact"}],"termid":"PR:Q9P3E5"}


id: PBO:0085346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipase B (lysophospholipase) involved in lipid metabolism; hydrolyzes phosphatidylinositol and phosphatidylserine and displays transacylase activity in vitro; PLB3 has a paralog, PLB1, that arose from the whole genome duplication","termid":"PBO:0085346"}


id: FYPO:0001474
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the mitotic spindle pole body is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"abnormal spindle pole body morphology","termid":"FYPO:0004607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic spindle pole body morphology","synonyms":[{"name":"abnormal mitotic SPB morphology","type":"exact"},{"name":"abnormal mitotic spindle pole body structure","type":"narrow"},{"name":"abnormal spindle pole body morphology during mitotic cell cycle","type":"related"},{"name":"abnormal spindle pole body morphology during vegetative growth","type":"exact"}],"termid":"FYPO:0001474"}


id: PBO:0072216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S19","termid":"PBO:0072216"}


id: PBO:0045449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydropyrimidinase like 2","termid":"PBO:0045449"}


id: GO:0009979
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the introduction of an omega-3 double bond into an unsaturated 16-carbon fatty acid in a monogalactosyldiacylglycerol molecule.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete 16:0 monogalactosyldiacylglycerol desaturase activity (obsolete GO:0009979)","termid":"GO:0009979"}


id: PR:O59715
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dsd1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingolipid delta(4)-desaturase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B8.07c","synonyms":[{"name":"Spom972h-dsd1","type":"exact"},{"name":"delta 4-(E)-sphingolipid desaturase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"dihydroceramide desaturase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59715"}


id: PBO:0005018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB/POZ domain protein Btb1","termid":"PBO:0005018"}


id: GO:0070771
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaIIb-beta3 integrin complex bound to the cell surface antigen CD47 and the kinase c-Src.","definition_xrefs":["PMID:9169439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alphaIIb-beta3 integrin-CD47-Src complex","synonyms":[{"name":"ITGA2b-ITGB3-CD47-SRC complex","type":"narrow"}],"termid":"GO:0070771"}


id: GO:0031277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the assembly of pseudopodia from the lateral side of the cell.","definition_xrefs":["GOC:dph","GOC:pg","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of lateral pseudopodium assembly (obsolete GO:0031277)","synonyms":[{"name":"activation of lateral pseudopodium formation","type":"narrow"},{"name":"positive regulation of lateral pseudopodium formation","type":"related"},{"name":"stimulation of lateral pseudopodium formation","type":"narrow"},{"name":"up regulation of lateral pseudopodium formation","type":"related"},{"name":"up-regulation of lateral pseudopodium formation","type":"related"},{"name":"upregulation of lateral pseudopodium formation","type":"related"}],"termid":"GO:0031277"}


id: GO:0090128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent of synapse maturation, the process that organizes a synapse so that it attains its fully functional state.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of synapse organization","termid":"GO:0050807"},{"relation_name":"regulates","term_name":"synapse maturation","termid":"GO:0060074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of synapse maturation","termid":"GO:0090128"}


id: PBO:0011125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacyl-[acyl-carrier-protein]reductase (predicted)","termid":"PBO:0011125"}


id: PBO:0051847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IRX2 divergent transcript","termid":"PBO:0051847"}


id: GO:0015315
data:
  {"annotated_genes":["SJAG_00612"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: organophosphate(out) + phosphate(in) = organophosphate(in) +  phosphate(out).","definition_xrefs":["TC:2.A.1.4.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate transmembrane transporter activity","termid":"GO:0005315"},{"relation_name":"is_a","term_name":"solute:inorganic anion antiporter activity","termid":"GO:0005452"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00612":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"organophosphate:phosphate antiporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"organophosphate:inorganic phosphate antiporter activity","type":"exact"}],"termid":"GO:0015315","terms_by_termid":{"GO:0140987":null}}


id: GO:0031691
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an alpha-1A adrenergic receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenergic receptor binding","termid":"GO:0031690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"alpha-1A adrenergic receptor binding","synonyms":[{"name":"alpha-1A adrenergic receptor ligand","type":"narrow"}],"termid":"GO:0031691"}


id: GO:0061064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of nematode larval development, the process whose specific outcome is the progression of the nematode larva over time, from its formation to the mature structure. Nematode larval development begins with the newly hatched first-stage larva (L1) and ends with the end of the last larval stage (for example the fourth larval stage (L4) in C. elegans). Each stage of nematode larval development is characterized by proliferation of specific cell lineages and an increase in body size without alteration of the basic body plan. Nematode larval stages are separated by molts in which each stage-specific exoskeleton, or cuticle, is shed and replaced anew.","definition_xrefs":["GOC:dph","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of post-embryonic development","termid":"GO:0048581"},{"relation_name":"is_a","term_name":"regulation of nematode larval development","termid":"GO:0061062"},{"relation_name":"negatively_regulates","term_name":"nematode larval development","termid":"GO:0002119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nematode larval development","termid":"GO:0061064"}


id: RO:HOM0000075
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Historical homology that involves orthologous pairs of transcription factors and downstream regulated genes in different organisms.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_historical_homology_relationship_with","termid":"RO:HOM0000007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_regulogy_relationship_with","synonyms":[{"name":"regulogous to","type":"exact"}],"termid":"RO:HOM0000075"}


id: PBO:0031229
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ergosterol_biosynthetic_process","termid":"PBO:0031229"}


id: PBO:0039814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor 4 pseudogene 5","termid":"PBO:0039814"}


id: PBO:0060880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neudesin neurotrophic factor pseudogene 1","termid":"PBO:0060880"}


id: PBO:0005714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein Rpp0 (predicted)","termid":"PBO:0005714"}


id: PATO:0001952
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being arranged in two opposite rows (and hence in the same plane).","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distichous","termid":"PATO:0001952"}


id: GO:2000547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dendritic cell dendrite assembly.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120032"},{"relation_name":"regulates","term_name":"dendritic cell dendrite assembly","termid":"GO:0097026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of dendritic cell dendrite assembly","synonyms":[{"name":"regulation of dendritic extension","type":"related"}],"termid":"GO:2000547"}


id: GO:0002574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized myeloid precursor cell acquires the specialized features of a thrombocyte, a nucleated cell found in all vertebrates but mammals involved in hemostasis.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell differentiation","termid":"GO:0030099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thrombocyte differentiation","termid":"GO:0002574"}


id: FYPO:0005482
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of an inositol phosphate phosphatase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phosphatase activity","termid":"FYPO:0004302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"abnormal inositol phosphate phosphatase activity","termid":"FYPO:0005482"}


id: PBO:0017874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex, platform subcomplex scaffold subunit Apc1","termid":"PBO:0017874"}


id: GO:0018807
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-hydroxycyclohex-1-ene-1-carboxyl-CoA + H2O = 2,6-dihydroxycyclohexane-1-carboxyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds","termid":"GO:0016822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"6-hydroxycyclohex-1-ene-1-carboxyl-CoA hydratase activity","secondary_identifiers":["RHEA:39651","EC:3.7.1.21"],"termid":"GO:0018807"}


id: PBO:0070995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 19","termid":"PBO:0070995"}


id: PBO:0028067
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_mitochondrion","termid":"PBO:0028067"}


id: GO:0043695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a pheromone stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"response to pheromone","termid":"GO:0019236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of pheromone","termid":"GO:0043695"}


id: PBO:0012226
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-type cyclin pombe","termid":"PBO:0012226"}


id: GO:0048483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the autonomic nervous system over time, from its formation to the mature structure. The autonomic nervous system is composed of neurons that are not under conscious control, and is comprised of two antagonistic components, the sympathetic and parasympathetic nervous systems. The autonomic nervous system regulates key functions including the activity of the cardiac (heart) muscle, smooth muscles (e.g. of the gut), and glands.","definition_xrefs":["FMA:9905","GOC:jid","GOC:sr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"},{"relation_name":"part_of","term_name":"nervous system development","termid":"GO:0007399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"autonomic nervous system development","termid":"GO:0048483"}


id: PBO:0086987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Repressible vacuolar alkaline phosphatase; controls polyphosphate content; regulated by levels of Pi and by Pho4p, Pho9p, Pho80p, Pho81p and Pho85p; dephosphorylates phosphotyrosyl peptides; contributes to NAD+ metabolism by producing nicotinamide riboside from NMN","termid":"PBO:0086987"}


id: GO:1904383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sodium phosphate stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:24625659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to salt","termid":"GO:1902074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to sodium phosphate","termid":"GO:1904383"}


id: PBO:0034155
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-partially_overlaps","termid":"PBO:0034155"}


id: PBO:0086830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YPL039W is not an essential gene","termid":"PBO:0086830"}


id: FYPO:0001133
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which DNA replication is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal DNA replication","termid":"FYPO:0001133"}


id: PBO:0051572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 17A","termid":"PBO:0051572"}


id: PBO:0076658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 20","termid":"PBO:0076658"}


id: PBO:0031549
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_rDNA_separation","termid":"PBO:0031549"}


id: GO:1901194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of formation of translation preinitiation complex.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of formation of translation preinitiation complex","termid":"GO:1901193"},{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic translational initiation","termid":"GO:1904689"},{"relation_name":"negatively_regulates","term_name":"formation of translation preinitiation complex","termid":"GO:0001731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0002181","GO:0065003","GO:0044085","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of formation of translation preinitiation complex","synonyms":[{"name":"down regulation of formation of translation pre-initiation complex","type":"exact"},{"name":"down regulation of formation of translation preinitiation complex","type":"exact"},{"name":"down regulation of translation preinitiation complex assembly","type":"exact"},{"name":"down-regulation of formation of translation pre-initiation complex","type":"exact"},{"name":"down-regulation of formation of translation preinitiation complex","type":"exact"},{"name":"down-regulation of translation preinitiation complex assembly","type":"exact"},{"name":"downregulation of formation of translation pre-initiation complex","type":"exact"},{"name":"downregulation of formation of translation preinitiation complex","type":"exact"},{"name":"downregulation of translation preinitiation complex assembly","type":"exact"},{"name":"inhibition of formation of translation pre-initiation complex","type":"exact"},{"name":"inhibition of formation of translation preinitiation complex","type":"narrow"},{"name":"inhibition of translation preinitiation complex assembly","type":"exact"},{"name":"negative regulation of formation of translation pre-initiation complex","type":"exact"},{"name":"negative regulation of translation preinitiation complex assembly","type":"exact"}],"termid":"GO:1901194"}


id: GO:0021818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The changes in the actin cytoskeleton that are necessary for the movement of cells along radial glial cells as a component of the process of cerebral cortex glial-mediated radial cell migration.","definition_xrefs":["GO_REF:0000021","GOC:jid","GOC:dgh","GOC:dph","PMID:12626695","GOC:cls"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of the microfilament cytoskeleton involved in cell locomotion in cerebral cortex radial glia guided migration (obsolete GO:0021818)","synonyms":[{"name":"modulation of the microfilament cytoskeleton involved in cell locomotion in cerebral cortex glial-mediated radial migration","type":"exact"}],"termid":"GO:0021818"}


id: PBO:0066047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAP1B pseudogene 3","termid":"PBO:0066047"}


id: PBO:0071136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22","termid":"PBO:0071136"}


id: PBO:0088406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin-7","termid":"PBO:0088406"}


id: GO:0031945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving glucocorticoids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"regulation of glucocorticoid metabolic process","termid":"GO:0031943"},{"relation_name":"is_a","term_name":"positive regulation of hormone metabolic process","termid":"GO:0032352"},{"relation_name":"is_a","term_name":"positive regulation of steroid metabolic process","termid":"GO:0045940"},{"relation_name":"positively_regulates","term_name":"glucocorticoid metabolic process","termid":"GO:0008211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of glucocorticoid metabolic process","synonyms":[{"name":"activation of glucocorticoid metabolic process","type":"narrow"},{"name":"positive regulation of glucocorticoid metabolism","type":"exact"},{"name":"stimulation of glucocorticoid metabolic process","type":"narrow"},{"name":"up regulation of glucocorticoid metabolic process","type":"exact"},{"name":"up-regulation of glucocorticoid metabolic process","type":"exact"},{"name":"upregulation of glucocorticoid metabolic process","type":"exact"}],"termid":"GO:0031945"}


id: PBO:0034752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase complex ubiquitin-like protein ligase subunit Cti6","termid":"PBO:0034752"}


id: GO:0030832
data:
  {"annotated_genes":["SJAG_00279","SJAG_04100","SJAG_03086","SJAG_01993","SJAG_02700","SJAG_01894","SJAG_04479","SJAG_02566","SJAG_00521","SJAG_04982"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94955,84326,110384,88371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[85895,86736,98803,101211,97807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030833"},{"annotations":[93786,110387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042989"}]},"cv_name":"biological_process","definition":"Any process that controls the length of actin filaments in a cell.","definition_xrefs":["GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component size","termid":"GO:0032535"},{"relation_name":"is_a","term_name":"regulation of actin cytoskeleton organization","termid":"GO:0032956"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03086":null,"SJAG_04100":null,"SJAG_04479":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036"],"is_obsolete":false,"name":"regulation of actin filament length","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030832","terms_by_termid":{"GO:0030833":null,"GO:0042989":null,"GO:0051016":null}}


id: GO:0031713
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a B2 bradykinin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bradykinin receptor binding","termid":"GO:0031711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"B2 bradykinin receptor binding","synonyms":[{"name":"B2 bradykinin receptor ligand","type":"narrow"}],"termid":"GO:0031713"}


id: PBO:0042130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil glutamate rich protein 1","termid":"PBO:0042130"}


id: FYPO:0004850
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a protein metabolic process is normal (i.e. indistinguishable from wild type). An RNA metabolic process is a series of chemical reactions and pathways involving any type of RNA.","definition_xrefs":["GO:0016070","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process","termid":"FYPO:0002496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal RNA metabolic process","synonyms":[{"name":"normal RNA metabolism","type":"exact"}],"termid":"FYPO:0004850"}


id: PBO:0059303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L49 pseudogene 2","termid":"PBO:0059303"}


id: GO:0048076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment of a pattern of pigment in the compound eye.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of eye pigmentation","termid":"GO:0048073"},{"relation_name":"regulates","term_name":"compound eye pigmentation","termid":"GO:0048072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of compound eye pigmentation","termid":"GO:0048076"}


id: GO:0047227
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1L-1-O-(indol-3-yl)acetyl-myo-inositol + UDP-D-galactose = 5-O-(indol-3-ylacetyl)-myo-inositol D-galactoside + H+ + UDP.","definition_xrefs":["RHEA:21148","EC:2.4.1.156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"indolylacetyl-myo-inositol galactosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.156-RXN","KEGG_REACTION:R04334"],"synonyms":[{"name":"UDP-galactose:(indol-3-yl)acetyl-myo-inositol 5-O-D-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:indol-3-ylacetyl-myo-inositol 5-O-D-galactosyltransferase activity","type":"related"},{"name":"indol-3-ylacetyl-myo-inositol galactoside synthase activity","type":"related"},{"name":"uridine diphosphogalactose-indolylacetylinositol galactosyltransferase activity","type":"related"}],"termid":"GO:0047227"}


id: GO:0035377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of water (H2O) from one side of an epithelium to the other.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"water transport","termid":"GO:0006833"},{"relation_name":"is_a","term_name":"epithelial fluid transport","termid":"GO:0042045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"transepithelial water transport","termid":"GO:0035377"}


id: PBO:0064380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 2","termid":"PBO:0064380"}


id: GO:1905754
data:
  {"annotated_genes":["SJAG_01867","SJAG_03638"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87903,109098],"is_not":false,"summary":null,"term":"GO:1905754"}]},"cv_name":"cellular_component","definition":"Any nucleus that is part of a ascospore-type prospore.","definition_xrefs":["GOC:TermGenie","GO_REF:0000064","PMID:26942678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus","termid":"GO:0005634"},{"relation_name":"part_of","term_name":"ascospore-type prospore","termid":"GO:0042764"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01867":null,"SJAG_03638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"ascospore-type prospore nucleus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell nucleus of ascospore-type prospore","type":"exact"},{"name":"nucleus of ascospore-type prospore","type":"exact"}],"termid":"GO:1905754","terms_by_termid":{"GO:1905754":null}}


id: GO:0044534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of apoptosis in the bitten organism.","definition_xrefs":["GOC:fj","GOC:jl","PMID:17983639"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in modulation of apoptotic process in another organism (obsolete GO:0044534)","synonyms":[{"name":"envenomation resulting in modulation of apoptotic process in other organism","type":"exact"}],"termid":"GO:0044534"}


id: SO:0002292
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An mRNA that is generated by backsplicing of exons or introns, resulting in a covalently closed loop without a 5’ cap or 3’ polyA tail.","definition_xrefs":["PMID:29086764","PMID:29182528","PMID:29576969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA","termid":"SO:0000234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circular_mRNA","synonyms":[{"name":"circular mRNA","type":"exact"},{"name":"coding circRNA","type":"exact"}],"termid":"SO:0002292"}


id: PBO:0070855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene 8","termid":"PBO:0070855"}


id: PBO:0056800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase","termid":"PBO:0056800"}


id: PBO:0084407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lysophosphatidic acid (LPA) phosphatase, nucleotidase; principle and physiological nucleotidase working on GMP, UMP and CMP; involved in LPA hydrolysis in response to phosphate starvation and ribose salvage pathway; phosphatase activity is soluble and Mg2+ dependent; expression is induced by low phosphate levels and by inactivation of Pho85p; repressed by Gcn4p under normal conditions; PHM8 has a paralog, SDT1, that arose from the whole genome duplication","termid":"PBO:0084407"}


id: PBO:0052991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminin subunit alpha 3","termid":"PBO:0052991"}


id: GO:2000294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of defecation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of secretion","termid":"GO:0051047"},{"relation_name":"is_a","term_name":"positive regulation of digestive system process","termid":"GO:0060456"},{"relation_name":"is_a","term_name":"regulation of defecation","termid":"GO:2000292"},{"relation_name":"positively_regulates","term_name":"defecation","termid":"GO:0030421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of defecation","termid":"GO:2000294"}


id: PBO:0028157
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-branched,_curved,_elongated,_multiseptate_vegetative_cell","termid":"PBO:0028157"}


id: FYPO:0006533
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}],"single_locus_phenotype":[{"annotations":[115417,115418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000731"},{"annotations":[115388,115396,115389,115400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell periphery is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04498":null},"genotype_count":3,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"name":"abnormal protein localization to cell periphery","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"single_locus_genotype_uniquenames":["mid1delta","pom1delta"],"synonyms":[{"name":"abnormal protein localisation to cell periphery","type":"exact"}],"termid":"FYPO:0006533","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000731":null,"FYPO:0007177":null,"FYPO_EXT:0000001":null}}


id: MOD:01440
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to an L-glutamyl semialdehyde.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamyl semialdehyde","synonyms":[{"name":"(S)-2-amino-5-oxopentanoic acid","type":"exact"},{"name":"L-glutamic gamma-semialdehyde","type":"exact"}],"termid":"MOD:01440"}


id: GO:0035459
data:
  {"annotated_genes":["SJAG_01381","SJAG_00072","SJAG_05345","SJAG_02349","SJAG_02539","SJAG_03153","SJAG_05344","SJAG_03558"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035652"},{"annotations":[89412,74035,106261,108775,108037,112670,70496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090110"}]},"cv_name":"biological_process","definition":"The formation of a macromolecular complex between the coat proteins and proteins and/or lipoproteins that are going to be transported by a vesicle.","definition_xrefs":["GOC:bf","GOC:lb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"},{"relation_name":"part_of","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_01381":null,"SJAG_02349":null,"SJAG_02539":null,"SJAG_03153":null,"SJAG_03558":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"vesicle cargo loading","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cargo loading into vesicle","type":"exact"},{"name":"cargo selection","type":"exact"}],"termid":"GO:0035459","terms_by_termid":{"GO:0035652":null,"GO:0090110":null}}


id: GO:2001238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of extrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic signaling pathway","termid":"GO:2001235"},{"relation_name":"is_a","term_name":"regulation of extrinsic apoptotic signaling pathway","termid":"GO:2001236"},{"relation_name":"positively_regulates","term_name":"extrinsic apoptotic signaling pathway","termid":"GO:0097191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of extrinsic apoptotic signaling pathway","synonyms":[{"name":"positive regulation of extrinsic apoptosis","type":"narrow"},{"name":"positive regulation of extrinsic apoptotic signalling pathway","type":"exact"}],"termid":"GO:2001238"}


id: GO:0060422
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a peptidyl-dipeptidase. Peptidyl-dipeptidase activity catalyzes the release of C-terminal dipeptides from a polypeptide chain.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase inhibitor activity","termid":"GO:0030414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0004857"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0030234","GO:0140678","GO:0004857"],"is_obsolete":false,"name":"peptidyl-dipeptidase inhibitor activity","termid":"GO:0060422"}


id: PBO:0087221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Scaffold protein responsible for phagophore assembly site organization; regulatory subunit of an autophagy-specific complex that includes Atg1p and Atg13p; stimulates Atg1p kinase activity; human ortholog RB1CC1/FIP200 interacts with p53, which inhibits autophagy in human cells","termid":"PBO:0087221"}


id: GO:1900618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of shoot morphogenesis.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"shoot system morphogenesis","termid":"GO:0010016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of shoot system morphogenesis","synonyms":[{"name":"regulation of shoot morphogenesis","type":"exact"}],"termid":"GO:1900618"}


id: GO:0099543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse mediated by a soluble gas ligand crossing the synaptic cleft.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling","termid":"GO:0099537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"trans-synaptic signaling by soluble gas","termid":"GO:0099543"}


id: GO:1901044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any protein polyubiquitination that is involved in nucleus-associated proteasomal ubiquitin-dependent protein catabolic process.","definition_xrefs":["GOC:al","PMID:21324894","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete protein polyubiquitination involved in nucleus-associated proteasomal ubiquitin-dependent protein catabolic process (obsolete GO:1901044)","termid":"GO:1901044"}


id: GO:0050371
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tyrosine + H2O = NH4 + phenol + pyruvate.","definition_xrefs":["RHEA:21704","EC:4.1.99.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-carbon lyase activity","termid":"GO:0016830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tyrosine phenol-lyase activity","secondary_identifiers":["MetaCyc:TYROSINE-PHENOL-LYASE-RXN","KEGG_REACTION:R00728"],"synonyms":[{"name":"L-tyrosine phenol-lyase (deaminating)","type":"related"},{"name":"L-tyrosine phenol-lyase (deaminating; pyruvate-forming)","type":"related"},{"name":"beta-tyrosinase activity","type":"related"}],"termid":"GO:0050371"}


