# terms

id: PBO:0059367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S18B pseudogene 2","termid":"PBO:0059367"}


id: PBO:0073653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIM bHLH transcription factor 1","termid":"PBO:0073653"}


id: GO:1902309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of peptidyl-serine dephosphorylation.","definition_xrefs":["PMID:11953308","GOC:mtg_cardiac_conduct_nov11","GOC:rl","GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of peptidyl-serine dephosphorylation (obsolete GO:1902309)","synonyms":[{"name":"down regulation of peptidyl-serine dephosphorylation","type":"exact"},{"name":"down-regulation of peptidyl-serine dephosphorylation","type":"exact"},{"name":"downregulation of peptidyl-serine dephosphorylation","type":"exact"},{"name":"inhibition of peptidyl-serine dephosphorylation","type":"narrow"}],"termid":"GO:1902309"}


id: PBO:0000917
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae ERG20","termid":"PBO:0000917"}


id: PBO:0067535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 679, pseudogene","termid":"PBO:0067535"}


id: PBO:0038470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 9","termid":"PBO:0038470"}


id: PBO:0110459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane O-mannosyltransferase Ogm4","termid":"PBO:0110459"}


id: GO:0102191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4alpha-carboxy-5alpha-cholesta-7,24-dien-3beta-ol + NAD(1-) = 5alpha-cholesta-7,24-dien-3-one + NADH(2-) + carbon dioxide.","definition_xrefs":["RHEA:59016","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"4alpha-carboxy-5alpha-cholesta-7,24-dien-3beta-ol dehydrogenase/C4-decarboxylase activity","secondary_identifiers":["MetaCyc:RXN-11959","EC:1.1.1.418"],"termid":"GO:0102191"}


id: PBO:0040775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bestrophin 1","termid":"PBO:0040775"}


id: PBO:0028238
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized_protein","termid":"PBO:0028238"}


id: PBO:0077923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPT1 pseudogene 14","termid":"PBO:0077923"}


id: GO:0003213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the right cardiac atrium is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac atrium morphogenesis","termid":"GO:0003209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac right atrium morphogenesis","termid":"GO:0003213"}


id: PBO:0077578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and immunoglobulin domain containing 3","termid":"PBO:0077578"}


id: PBO:0027789
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cut_cell_with_decreased_poly(A)+_mRNA_export_from_nucleus","termid":"PBO:0027789"}


id: PBO:0079306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 3","termid":"PBO:0079306"}


id: GO:1901352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phosphatidylglycerol biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:12869188","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of phospholipid biosynthetic process","termid":"GO:0071072"},{"relation_name":"is_a","term_name":"regulation of phosphatidylglycerol biosynthetic process","termid":"GO:1901351"},{"relation_name":"negatively_regulates","term_name":"phosphatidylglycerol biosynthetic process","termid":"GO:0006655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of phosphatidylglycerol biosynthetic process","synonyms":[{"name":"down regulation of phosphatidylglycerol anabolism","type":"exact"},{"name":"down regulation of phosphatidylglycerol biosynthesis","type":"exact"},{"name":"down regulation of phosphatidylglycerol biosynthetic process","type":"exact"},{"name":"down regulation of phosphatidylglycerol formation","type":"exact"},{"name":"down regulation of phosphatidylglycerol synthesis","type":"exact"},{"name":"down-regulation of phosphatidylglycerol anabolism","type":"exact"},{"name":"down-regulation of phosphatidylglycerol biosynthesis","type":"exact"},{"name":"down-regulation of phosphatidylglycerol biosynthetic process","type":"exact"},{"name":"down-regulation of phosphatidylglycerol formation","type":"exact"},{"name":"down-regulation of phosphatidylglycerol synthesis","type":"exact"},{"name":"downregulation of phosphatidylglycerol anabolism","type":"exact"},{"name":"downregulation of phosphatidylglycerol biosynthesis","type":"exact"},{"name":"downregulation of phosphatidylglycerol biosynthetic process","type":"exact"},{"name":"downregulation of phosphatidylglycerol formation","type":"exact"},{"name":"downregulation of phosphatidylglycerol synthesis","type":"exact"},{"name":"inhibition of phosphatidylglycerol anabolism","type":"narrow"},{"name":"inhibition of phosphatidylglycerol biosynthesis","type":"narrow"},{"name":"inhibition of phosphatidylglycerol biosynthetic process","type":"narrow"},{"name":"inhibition of phosphatidylglycerol formation","type":"narrow"},{"name":"inhibition of phosphatidylglycerol synthesis","type":"narrow"},{"name":"negative regulation of phosphatidylglycerol anabolism","type":"exact"},{"name":"negative regulation of phosphatidylglycerol biosynthesis","type":"exact"},{"name":"negative regulation of phosphatidylglycerol formation","type":"exact"},{"name":"negative regulation of phosphatidylglycerol synthesis","type":"exact"}],"termid":"GO:1901352"}


id: PBO:0080082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 44","termid":"PBO:0080082"}


id: GO:0001087
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a basal RNA polymerase II transcription factor of the TFIIB class in order to modulate transcription. The transcription factor may or may not also interact selectively with DNA as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, TFIIB-class binding (obsolete GO:0001087)","synonyms":[{"name":"TFIIB-class binding transcription factor activity","type":"exact"}],"termid":"GO:0001087"}


id: PBO:0057002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 95","termid":"PBO:0057002"}


id: GO:0071636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of transforming growth factor-beta.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of transforming growth factor beta production","termid":"GO:0071634"},{"relation_name":"positively_regulates","term_name":"transforming growth factor beta production","termid":"GO:0071604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of transforming growth factor beta production","secondary_identifiers":["GO:2001203"],"synonyms":[{"name":"positive regulation of TGF-B production","type":"exact"},{"name":"positive regulation of TGF-beta production","type":"exact"},{"name":"positive regulation of TGFB production","type":"exact"},{"name":"positive regulation of TGFbeta production","type":"exact"},{"name":"positive regulation of transforming growth factor-beta production","type":"exact"},{"name":"positive regulation of transforming growth factor-beta secretion","type":"narrow"}],"termid":"GO:0071636"}


id: PBO:0064102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi like RNA-mediated gene silencing 3","termid":"PBO:0064102"}


id: GO:0071091
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha1-beta1 integrin complex bound to tissue transglutaminase.","definition_xrefs":["PMID:10684262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alpha1-beta1 integrin-tissue transglutaminase complex","synonyms":[{"name":"ITGA1-ITGB1-TGM2 complex","type":"narrow"}],"termid":"GO:0071091"}


id: GO:0043956
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxypropionyl-CoA = acryloyl-CoA + H2O.","definition_xrefs":["GOC:jl","PMID:11821399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enoyl-CoA hydratase activity","termid":"GO:0004300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"3-hydroxypropionyl-CoA dehydratase activity","secondary_identifiers":["RHEA:26518","MetaCyc:RXN-6383","EC:4.2.1.116"],"synonyms":[{"name":"3-hydroxy propionyl-CoA dehydratase activity","type":"exact"},{"name":"AMP-dependent synthetase and ligase","type":"broad"},{"name":"AMP-dependent synthetase and ligase:Enoyl-CoA hydratase/isomerase","type":"broad"},{"name":"acetyl-coenzyme A synthetase","type":"broad"},{"name":"acetyl-coenzyme A synthetase/GroES-like domain","type":"broad"},{"name":"enoyl-CoA hydratase/isomerase","type":"broad"}],"termid":"GO:0043956"}


id: GO:0036139
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-histidyl-[protein] + 2-oxoglutarate + O2 = (3S)-3-hydroxy-L-histidyl-[protein] + succinate + CO2.","definition_xrefs":["RHEA:54256","PMID:21251231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"peptidyl-histidine dioxygenase activity","secondary_identifiers":["MetaCyc:RXN-22839","Reactome:R-HSA-9630993","Reactome:R-HSA-9630967","EC:1.14.11.79"],"synonyms":[{"name":"protein histidyl hydroxylase","type":"broad"},{"name":"protein-L-histidine (3S)-3-hydroxylase","type":"exact"}],"termid":"GO:0036139"}


id: GO:0019075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The refolding and structural rearrangements of virion parts to transition from the intermediate virion to the more mature virion. Maturation usually involves proteolysis events and changes in the folding of the virion proteins. Can occur inside the host cell or after release.","definition_xrefs":["ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral life cycle","termid":"GO:0019058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"virus maturation","synonyms":[{"name":"bacteriophage maturation","type":"narrow"},{"name":"viral maturation","type":"exact"}],"termid":"GO:0019075"}


id: MOD:01115
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an L-tryptophan residue with a group derived from an isoprene polymer, such as a geranyl (C10), farnesyl (C15) or geranylgeranyl (C20).","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenylated residue","termid":"MOD:00703"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoprenylated tryptophan","synonyms":[{"name":"IpTrp","type":"exact"}],"termid":"MOD:01115"}


id: PBO:0089158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7-like Rlp7 involved in ribosome biogenesis","termid":"PBO:0089158"}


id: PBO:0070315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY3 pseudogene 4","termid":"PBO:0070315"}


id: PBO:0049443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase, very large interferon inducible pseudogene 1","termid":"PBO:0049443"}


id: PBO:0070790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 20","termid":"PBO:0070790"}


id: GO:0036193
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxy-2H-1,4-benzoxazin-3(4H)-one + O2 + reduced [NADPH--hemoprotein reductase] = DIBOA + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:31939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-hydroxy-1,4-benzoxazin-3-one monooxygenase activity","secondary_identifiers":["EC:1.14.14.110","KEGG_REACTION:R07423"],"termid":"GO:0036193"}


id: PBO:0067670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 850, pseudogene","termid":"PBO:0067670"}


id: PBO:0058915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12133","termid":"PBO:0058915"}


id: FYPO:0001555
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the intermediate RNAs formed during tRNA processing differ from wild type in size.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA processing","termid":"FYPO:0001554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"formation of abnormal tRNA processing intermediates","synonyms":[{"name":"abnormal tRNA maturation intermediates","type":"exact"},{"name":"formation of abnormal tRNA processing intermediates during mitotic cell cycle","type":"related"},{"name":"formation of abnormal tRNA processing intermediates during vegetative growth","type":"exact"}],"termid":"FYPO:0001555"}


id: GO:0097485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of a neuron projection is directed to a specific target site in response to a combination of attractive and repulsive cues.","definition_xrefs":["GOC:rl","GOC:BHF","PMID:22790009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection development","termid":"GO:0031175"},{"relation_name":"part_of","term_name":"neuron projection morphogenesis","termid":"GO:0048812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron projection guidance","synonyms":[{"name":"neurite guidance","type":"narrow"},{"name":"neuron process guidance","type":"exact"},{"name":"neuron protrusion guidance","type":"exact"},{"name":"neuronal cell projection guidance","type":"exact"}],"termid":"GO:0097485"}


id: PR:P87055
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC57A10.07 gene.","definition_xrefs":["UniProtKB:P87055","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C57A10.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.07","synonyms":[{"name":"Spom972h-SPAC57A10.07","type":"exact"}],"termid":"PR:P87055"}


id: FYPO:0003717
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the actin cytoskeleton is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actin cytoskeleton during vegetative growth","termid":"FYPO:0004739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal actin cytoskeleton morphology during vegetative growth","synonyms":[{"name":"normal actin cytoskeleton morphology during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003717"}


id: GO:0180006
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: RNA polymerase II large subunit CTD heptapeptide repeat--phospho-L-serine (consensus YSPTSPS)(position 2) + H2O = RNA polymerase II large subunit + phosphate.","definition_xrefs":["PMID:22622228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II CTD heptapeptide repeat phosphatase activity","termid":"GO:0008420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0004721"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140096","GO:0016788","GO:0004721","GO:0016787"],"is_obsolete":false,"name":"RNA polymerase II CTD heptapeptide repeat S2 phosphatase activity","synonyms":[{"name":"RNA polymerase II C-terminal domain S2 phosphatase activity","type":"exact"}],"termid":"GO:0180006"}


id: FYPO:0002309
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of IMP binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal IMP binding","termid":"FYPO:0002308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased IMP binding","synonyms":[{"name":"reduced IMP binding","type":"exact"}],"termid":"FYPO:0002309"}


id: PBO:0111444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial rhomboid family peptidase Rbd1","termid":"PBO:0111444"}


id: PBO:0084156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High affinity sulfate permease; sulfate uptake is mediated by specific sulfate transporters Sul1p and Sul2p, which control the concentration of endogenous activated sulfate intermediates","termid":"PBO:0084156"}


id: PATO:0001191
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the middle relative to another entity.","definition_xrefs":["PATOC:nw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medial to","termid":"PATO:0001191"}


id: PBO:0077170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tousled like kinase 2 pseudogene 1","termid":"PBO:0077170"}


id: PBO:0056080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 6 family member L","termid":"PBO:0056080"}


id: PBO:0065971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD52 homolog, DNA repair protein","termid":"PBO:0065971"}


id: PBO:0087632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the EGO/GSE complex; the vacuolar/endosomal membrane associated EGO/GSE complex regulates exit from rapamycin-induced growth arrest, stimulating microautophagy and sorting of Gap1p from the endosome to the plasma membrane; essential for the integrity and function of EGO; gene exhibits synthetic genetic interaction with MSS4","termid":"PBO:0087632"}


id: GO:0035642
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + (histone H3)-arginine (position 17) = S-adenosyl-L-homocysteine + (histone H3)-N-methyl-arginine (position 17). This reaction is the addition of a methyl group to the arginine residue at position 17 of histone H3.","definition_xrefs":["GOC:sp","PMID:11341840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-arginine N-methyltransferase activity","termid":"GO:0016274"},{"relation_name":"is_a","term_name":"histone H3 methyltransferase activity","termid":"GO:0140938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0008276","GO:0016740","GO:0016741","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"histone H3R17 methyltransferase activity","synonyms":[{"name":"histone methylase activity (H3-R17 specific)","type":"exact"},{"name":"histone methyltransferase activity (H3-R17 specific)","type":"exact"},{"name":"histone-H3R17 methyltransferase activity","type":"exact"},{"name":"histone-arginine N-methyltransferase activity (H3-R17 specific)","type":"exact"}],"termid":"GO:0035642"}


id: PBO:0067981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 283","termid":"PBO:0067981"}


id: PBO:0055514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2948","termid":"PBO:0055514"}


id: GO:0048170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that increases long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers.","definition_xrefs":["PMID:11891290","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of long-term neuronal synaptic plasticity","termid":"GO:0048169"},{"relation_name":"is_a","term_name":"positive regulation of neurogenesis","termid":"GO:0050769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of long-term neuronal synaptic plasticity","synonyms":[{"name":"activation of long-term neuronal synaptic plasticity","type":"narrow"},{"name":"stimulation of long-term neuronal synaptic plasticity","type":"narrow"},{"name":"up regulation of long-term neuronal synaptic plasticity","type":"exact"},{"name":"up-regulation of long-term neuronal synaptic plasticity","type":"exact"},{"name":"upregulation of long-term neuronal synaptic plasticity","type":"exact"}],"termid":"GO:0048170"}


id: GO:0102541
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-galactose 6-phosphate = beta-D-galactose 6-phosphate.","definition_xrefs":["EC:5.1.3.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"D-galactose 6-phosphate 1-epimerase activity","secondary_identifiers":["MetaCyc:RXN-14816"],"termid":"GO:0102541"}


id: PBO:0046391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EP400 pseudogene 1","termid":"PBO:0046391"}


id: GO:2000935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellotriose metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of cellotriose metabolic process","termid":"GO:2000933"},{"relation_name":"positively_regulates","term_name":"cellotriose metabolic process","termid":"GO:2000893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellotriose metabolic process","synonyms":[{"name":"positive regulation of cellotriose metabolism","type":"exact"}],"termid":"GO:2000935"}


id: PBO:0067082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 117, pseudogene","termid":"PBO:0067082"}


id: PBO:0041298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 calcium dependent domain containing 4B","termid":"PBO:0041298"}


id: PBO:0050350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 53","termid":"PBO:0050350"}


id: GO:0032144
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric protein complex that possesses 4-aminobutyrate transaminase activity.","definition_xrefs":["PMID:15528998","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"4-aminobutyrate transaminase complex","synonyms":[{"name":"ABAT complex","type":"exact"},{"name":"GABA transaminase complex","type":"exact"},{"name":"GABA-T complex","type":"exact"}],"termid":"GO:0032144"}


id: PBO:0048375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated RAB2 interactor 1A","termid":"PBO:0048375"}


id: PBO:0052593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin subunit alpha 2 pseudogene 2","termid":"PBO:0052593"}


id: PBO:0004709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein Tea2","termid":"PBO:0004709"}


id: PBO:0048566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamylamine cyclotransferase","termid":"PBO:0048566"}


id: GO:1903911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of receptor clustering.","definition_xrefs":["GOC:als","GO_REF:0000058","GOC:TermGenie","PMID:23575248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor clustering","termid":"GO:1903909"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to membrane","termid":"GO:1905477"},{"relation_name":"positively_regulates","term_name":"receptor clustering","termid":"GO:0043113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of receptor clustering","synonyms":[{"name":"activation of receptor clustering","type":"narrow"},{"name":"up regulation of receptor clustering","type":"exact"},{"name":"up-regulation of receptor clustering","type":"exact"},{"name":"upregulation of receptor clustering","type":"exact"}],"termid":"GO:1903911"}


id: PBO:0073312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small EDRK-rich factor 1A pseudogene 1","termid":"PBO:0073312"}


id: PBO:0036443
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OXidative Stress","termid":"PBO:0036443"}


id: PBO:0059889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 12","termid":"PBO:0059889"}


id: PBO:0111865
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine-rich repeat protein","termid":"PBO:0111865"}


id: FYPO:0002060
data:
  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vegetative cell population","references_by_uniquename":{"PMID:23090706":null,"PMID:23786411":null,"PMID:24184107":null,"PMID:25318672":null,"PMID:26774782":null,"PMID:28954740":null,"PMID:29566183":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:31150379":null,"PMID:32109380":null,"PMID:32243490":null,"PMID:36058798":null,"PMID:37164017":null,"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_01946","SJAG_04697","SJAG_03449","SJAG_01242","SJAG_04703","SJAG_01794","SJAG_03720","SJAG_00364","SJAG_00514","SJAG_00409","SJAG_02592","SJAG_00601","SJAG_00266","SJAG_01355","SJAG_05207","SJAG_00426","SJAG_03892","SJAG_00429","SJAG_02763","SJAG_03198","SJAG_04464","SJAG_02527","SJAG_03453"],"single_locus_genotype_uniquenames":["oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","scd1delta","oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression","tel1delta","sty1delta","for3delta","rad3delta","vps4delta","ned1delta","vps32delta","gpd1delta","atf1delta","ras1delta","oar2delta","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","cox6delta","scd2delta","cem1delta","rip1delta","man1delta","rad26delta","cmp7delta","lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","gms1delta","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"viable 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id: GO:0035957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the breakdown of starch, by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of starch catabolic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0035957)","synonyms":[{"name":"positive regulation of starch breakdown by regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of starch breakdown by regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of starch catabolic process by regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of starch catabolism by regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of starch catabolism by regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of starch degradation by regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of starch degradation by regulation of transcription from RNA polymerase II promoter","type":"related"}],"termid":"GO:0035957"}


id: PBO:0026695
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_tellurite","termid":"PBO:0026695"}


id: GO:1990633
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A type of punctate focus localized to the perinuclear region of germline cytoplasm in C. elegans. Mutator foci are required for RNA interference (RNAi) and serve as sites of small inhibitory RNA (siRNA) amplification. As such, proteins that localize to mutator foci include RNA-directed RNA polymerases (RdRPs) and beta-nucleotidyltransferases. Mutator foci are distinct from, but adjacent to or partially overlap, P granules.","definition_xrefs":["PMID:25635455","PMID:22713602","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic ribonucleoprotein granule","termid":"GO:0036464"},{"relation_name":"part_of","term_name":"perinuclear region of cytoplasm","termid":"GO:0048471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"mutator focus","termid":"GO:1990633"}


id: GO:0170006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which lipoate is transported across a membrane.","definition_xrefs":["PMID:25971966","PMID:20980265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"lipoate transmembrane transport","termid":"GO:0170006"}


id: PATO:0001477
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being drawn in or pulled back from any given point.","definition_xrefs":["Dictionary.com:Dictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retracted","synonyms":[{"name":"moved ","type":"broad"},{"name":"retruded","type":"related"}],"termid":"PATO:0001477"}


id: GO:1904779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to centrosome.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:17115027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to centrosome","termid":"GO:0071539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to centrosome","synonyms":[{"name":"regulation of protein localisation to centrosome","type":"exact"}],"termid":"GO:1904779"}


id: PBO:0088152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-ATPase assembly factor; functions with other V-ATPase assembly factors in the ER to efficiently assemble the V-ATPase membrane sector (V0); protein abundance increases in response to DNA replication stress","termid":"PBO:0088152"}


id: PBO:0089164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-formyltetrahydrofolate cyclo-ligase Fau1","termid":"PBO:0089164"}


id: PBO:0000049
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"qualifier","termid":"PBO:0000049"}


id: PATO:0001550
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sensitivity toward an external stimulus which is lower than normal/average.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"sensitive toward","termid":"PATO:0000516"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased sensitivity toward","synonyms":[{"name":"decreased sensitivity","type":"exact"},{"name":"low sensitivity toward","type":"exact"}],"termid":"PATO:0001550"}


id: GO:0071338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of hair follicle cell proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of hair follicle cell proliferation","termid":"GO:0071336"},{"relation_name":"positively_regulates","term_name":"hair follicle cell proliferation","termid":"GO:0071335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hair follicle cell proliferation","synonyms":[{"name":"activation of hair follicle cell proliferation","type":"narrow"},{"name":"stimulation of hair follicle cell proliferation","type":"narrow"},{"name":"up regulation of hair follicle cell proliferation","type":"exact"},{"name":"up-regulation of hair follicle cell proliferation","type":"exact"},{"name":"upregulation of hair follicle cell proliferation","type":"exact"}],"termid":"GO:0071338"}


id: PATO:0000912
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A rate which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"rate","termid":"PATO:0000161"},{"relation_name":"is_a","term_name":"increased process quality","termid":"PATO:0002304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased rate","synonyms":[{"name":"fast rate","type":"exact"},{"name":"high rate","type":"exact"}],"termid":"PATO:0000912"}


id: GO:0070336
data:
  {"annotated_genes":["SJAG_01076","SJAG_04671","SJAG_04752","SJAG_03994","SJAG_03780"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90793,99261,108590,112890],"is_not":false,"summary":null,"term":"GO:0070336"},{"annotations":[95423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070337"}]},"cv_name":"molecular_function","definition":"Binding to a flap structure in DNA. A DNA flap structure is one in which a single-stranded length of DNA or RNA protrudes from a double-stranded DNA molecule.","definition_xrefs":["GOC:mah","PMID:15189154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01076":null,"SJAG_03780":null,"SJAG_03994":null,"SJAG_04671":null,"SJAG_04752":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"flap-structured DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070336","terms_by_termid":{"GO:0070336":null,"GO:0070337":null}}


id: CHEBI:58088
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidyl-1D-myo-inositol 3-phosphate(3-)","termid":"CHEBI:58088"}


id: PR:O59738
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC530.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C530.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.02","synonyms":[{"name":"Spom972h-SPBC530.02","type":"exact"}],"termid":"PR:O59738"}


id: PBO:0039505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 26 pseudogene 3","termid":"PBO:0039505"}


id: PBO:0040189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 2","termid":"PBO:0040189"}


id: GO:0034212
data:
  {"annotated_genes":["SJAG_02773","SJAG_01826","SJAG_02726","SJAG_04631","SJAG_02990","SJAG_04791","SJAG_04179","SJAG_01204","SJAG_04131","SJAG_03537","SJAG_02165","SJAG_00676"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95030],"is_not":false,"summary":null,"term":"GO:0034212"},{"annotations":[114608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043998"},{"annotations":[87464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010484"},{"annotations":[87465,86819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036408"},{"annotations":[87466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043993"},{"annotations":[95025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044016"},{"annotations":[105376,105375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032931"},{"annotations":[87467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043992"},{"annotations":[114609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010485"},{"annotations":[84499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043997"},{"annotations":[95026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046972"},{"annotations":[84500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043995"},{"annotations":[84501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043996"},{"annotations":[106474,114054,111415,99646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004596"},{"annotations":[85464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990190"},{"annotations":[100058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061733"},{"annotations":[99647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120518"},{"annotations":[114610,85465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990189"}]},"cv_name":"molecular_function","definition":"Catalysis of the acetylation of an amino acid residue of a peptide or protein, according to the reaction: acetyl-CoA + peptide = CoA + N-acetylpeptide.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00676":null,"SJAG_01204":null,"SJAG_01826":null,"SJAG_02165":null,"SJAG_02726":null,"SJAG_02773":null,"SJAG_02990":null,"SJAG_03537":null,"SJAG_04131":null,"SJAG_04179":null,"SJAG_04631":null,"SJAG_04791":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"peptide N-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9760081","Reactome:R-HSA-3371554"],"termid":"GO:0034212","terms_by_termid":{"GO:0004596":null,"GO:0010484":null,"GO:0010485":null,"GO:0032931":null,"GO:0034212":null,"GO:0036408":null,"GO:0043992":null,"GO:0043993":null,"GO:0043995":null,"GO:0043996":null,"GO:0043997":null,"GO:0043998":null,"GO:0044016":null,"GO:0046972":null,"GO:0061733":null,"GO:0120518":null,"GO:1990189":null,"GO:1990190":null}}


id: PBO:0067605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 771, pseudogene","termid":"PBO:0067605"}


id: GO:0043557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the frequency, rate or extent of translation as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation in response to stress","termid":"GO:0043555"},{"relation_name":"part_of","term_name":"cellular response to osmotic stress","termid":"GO:0071470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of translation in response to osmotic stress","termid":"GO:0043557"}


id: PBO:0017909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermine family transmembrane transporter (predicted)","termid":"PBO:0017909"}


id: GO:0032456
data:
  {"annotated_genes":["SJAG_03756","SJAG_01382","SJAG_00314","SJAG_00669","SJAG_01809","SJAG_03250","SJAG_03915","SJAG_02282","SJAG_04509","SJAG_02912","SJAG_02753","SJAG_01135","SJAG_02177","SJAG_02811","SJAG_04565","SJAG_00379","SJAG_04609","SJAG_04846","SJAG_01945"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72089,95758,96250,100876,105226,108516,108552,111712,111791],"is_not":false,"summary":null,"term":"GO:0032456"},{"annotations":[103421,114560,114945,87343,97187,109069,88331,108844,90951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099638"},{"annotations":[83969],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2001135"}]},"cv_name":"biological_process","definition":"The directed movement of membrane-bounded vesicles from endosomes back to the plasma membrane, a trafficking pathway that promotes the recycling of internalized transmembrane proteins.","definition_xrefs":["PMID:16473635","PMID:23563491"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosomal transport","termid":"GO:0016197"},{"relation_name":"is_a","term_name":"vesicle-mediated transport to the plasma membrane","termid":"GO:0098876"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00314":null,"SJAG_00379":null,"SJAG_00669":null,"SJAG_01135":null,"SJAG_01382":null,"SJAG_01809":null,"SJAG_01945":null,"SJAG_02177":null,"SJAG_02282":null,"SJAG_02753":null,"SJAG_02811":null,"SJAG_02912":null,"SJAG_03250":null,"SJAG_03756":null,"SJAG_03915":null,"SJAG_04509":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_04846":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"endocytic recycling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1990126"],"synonyms":[{"name":"retrograde transport of endocytic vesicles","type":"related"},{"name":"retrograde transport, endosome to plasma membrane","type":"exact"}],"termid":"GO:0032456","terms_by_termid":{"GO:0032456":null,"GO:0099638":null,"GO:2001135":null}}


id: PBO:0005052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene wtf element Wtf3 (no methionine)","termid":"PBO:0005052"}


id: PBO:0075298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sine oculis binding protein homolog","termid":"PBO:0075298"}


id: PR:Q9UUJ9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A propionyl-CoA:succinate CoA transferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA hydrolase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.09c","secondary_identifiers":["UniProtKB:Q9UUJ9"],"synonyms":[{"name":"Spom972h-scpC","type":"exact"},{"name":"acetyl-CoA acylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"acetyl-CoA deacylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUJ9"}


id: PBO:0055217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2643","termid":"PBO:0055217"}


id: GO:0033432
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CGG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0060090","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"CGG codon-amino acid adaptor activity","synonyms":[{"name":"arginine tRNA","type":"related"}],"termid":"GO:0033432"}


id: PBO:0051373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3D-34 (pseudogene)","termid":"PBO:0051373"}


id: PBO:0080986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB20 antisense RNA 2","termid":"PBO:0080986"}


id: GO:1900855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of fumitremorgin B biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of fumitremorgin B biosynthetic process (obsolete GO:1900855)","synonyms":[{"name":"regulation of Lanosulin anabolism","type":"related"},{"name":"regulation of Lanosulin biosynthesis","type":"related"},{"name":"regulation of Lanosulin biosynthetic process","type":"related"},{"name":"regulation of Lanosulin formation","type":"related"},{"name":"regulation of Lanosulin synthesis","type":"related"},{"name":"regulation of fumitremorgin B anabolism","type":"exact"},{"name":"regulation of fumitremorgin B biosynthesis","type":"exact"},{"name":"regulation of fumitremorgin B formation","type":"exact"},{"name":"regulation of fumitremorgin B synthesis","type":"exact"}],"termid":"GO:1900855"}


id: PBO:0050219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 36","termid":"PBO:0050219"}


id: PBO:0078931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCG) 1-3","termid":"PBO:0078931"}


id: PBO:0000438
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibits Cdr2 localization at non-growing cell end","termid":"PBO:0000438"}


id: GO:0035238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any of the vitamin A compounds, retinol, retinal (retinaldehyde) and retinoic acid. Animals cannot synthesize vitamin A de novo, but form it through oxidative cleavage of carotenoids.","definition_xrefs":["PMID:11158606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin A metabolic process","termid":"GO:0006776"},{"relation_name":"is_a","term_name":"diterpenoid biosynthetic process","termid":"GO:0016102"},{"relation_name":"is_a","term_name":"fat-soluble vitamin biosynthetic process","termid":"GO:0042362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150","GO:0006766"],"is_obsolete":false,"name":"vitamin A biosynthetic process","synonyms":[{"name":"vitamin A anabolism","type":"exact"},{"name":"vitamin A biosynthesis","type":"exact"},{"name":"vitamin A formation","type":"exact"},{"name":"vitamin A synthesis","type":"exact"}],"termid":"GO:0035238"}


id: GO:0032958
data:
  {"annotated_genes":["SJAG_03409","SJAG_00321","SJAG_01148","SJAG_00244","SJAG_02321"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89432,94853,111109,113079,114882],"is_not":false,"summary":null,"term":"GO:0032958"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an inositol phosphate, 1,2,3,4,5,6-cyclohexanehexol, with one or more phosphate groups attached.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphate metabolic process","termid":"GO:0043647"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00321":null,"SJAG_01148":null,"SJAG_02321":null,"SJAG_03409":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"inositol phosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"inositol phosphate anabolism","type":"exact"},{"name":"inositol phosphate biosynthesis","type":"exact"},{"name":"inositol phosphate formation","type":"exact"},{"name":"inositol phosphate synthesis","type":"exact"},{"name":"myo-inositol phosphate biosynthetic process","type":"narrow"}],"termid":"GO:0032958","terms_by_termid":{"GO:0032958":null}}


id: GO:0060027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which an epithelium narrows along one axis and lengthens in a perpendicular axis usually resulting in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm.","definition_xrefs":["GOC:dph","PMID:12062082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"convergent extension","termid":"GO:0060026"},{"relation_name":"part_of","term_name":"gastrulation","termid":"GO:0007369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"convergent extension involved in gastrulation","termid":"GO:0060027"}


id: GO:0043498
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a component on the surface of a cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cell surface binding (obsolete GO:0043498)","synonyms":[{"name":"cell surface binding","type":"exact"}],"termid":"GO:0043498"}


id: PBO:0059926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 12","termid":"PBO:0059926"}


id: PBO:0085139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein required for rRNA synthesis and ribosomal assembly; required for the synthesis of 18S rRNA and for the assembly of 40S ribosomal subunit; essential gene","termid":"PBO:0085139"}


id: PBO:0031006
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_mononucleate_aseptate_cell","termid":"PBO:0031006"}


id: PBO:0012302
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae SRV2","termid":"PBO:0012302"}


id: PBO:0004604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-H homolog Fta3","termid":"PBO:0004604"}


id: FYPO:0001506
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylcholine measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular phosphatidylcholine level","synonyms":[{"name":"normal cellular PC level","type":"exact"},{"name":"normal cellular phosphatidylcholine accumulation","type":"related"},{"name":"normal cellular phosphatidylcholine level during mitotic cell cycle","type":"related"},{"name":"normal cellular phosphatidylcholine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001506"}


id: GO:0009093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cysteine, 2-amino-3-mercaptopropanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid catabolic process","termid":"GO:0000098"},{"relation_name":"is_a","term_name":"cysteine metabolic process","termid":"GO:0006534"},{"relation_name":"is_a","term_name":"alpha-amino acid catabolic process","termid":"GO:1901606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0006520","GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"cysteine catabolic process","secondary_identifiers":["Wikipedia:Cysteine"],"synonyms":[{"name":"cysteine breakdown","type":"exact"},{"name":"cysteine catabolism","type":"exact"},{"name":"cysteine degradation","type":"exact"}],"termid":"GO:0009093"}


id: FYPO:0005470
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate synthase activity using NADH as a cofactor is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"abnormal glutamate synthase (NADH) activity","synonyms":[{"name":"abnormal L-glutamate synthase (NADH) activity","type":"exact"},{"name":"abnormal NADH-dependent glutamate synthase activity","type":"exact"},{"name":"abnormal NADH: GOGAT activity","type":"related"},{"name":"abnormal glutamate (reduced nicotinamide adenine dinucleotide) synthase","type":"exact"}],"termid":"FYPO:0005470"}


id: PBO:0053159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low density lipoprotein receptor class A domain containing 1","termid":"PBO:0053159"}


id: FYPO:0001767
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional addition of methyl groups to the C48, C49, C60, C61 and C62 residues in a tRNA-Asp molecule, occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA methylation","termid":"FYPO:0001766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0000294","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased tRNA-Asp C48, C49, C60, C61 and C62 methylation","synonyms":[{"name":"decreased tRNA-Asp C48, C49, C60, C61 and C62 methylation during mitotic cell cycle","type":"related"},{"name":"decreased tRNA-Asp C48, C49, C60, C61 and C62 methylation during vegetative growth","type":"exact"},{"name":"decreased tRNA-Asp methylation on C48, C49, C60, C61 and C62","type":"exact"},{"name":"reduced tRNA-Asp C48, C49, C60, C61 and C62 methylation","type":"exact"}],"termid":"FYPO:0001767"}


id: PR:O14176
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- usp104 gene.","definition_xrefs":["UniProtKB:O14176","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-processing protein prp40 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.13","synonyms":[{"name":"Spom972h-usp104","type":"exact"}],"termid":"PR:O14176"}


id: PBO:0061610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NudC domain containing 1","termid":"PBO:0061610"}


id: PBO:0045485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DS cell adhesion molecule like 1","termid":"PBO:0045485"}


id: FYPO:0004560
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to BE49385A (a GPI synthesis inhibitor, also called YW3548). Cells stop growing (and may die) at a concentration of BE49385A that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0002683","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to BE49385A","synonyms":[{"name":"hypersensitive to BE49385A","type":"exact"},{"name":"sensitive to BE49385A during mitotic cell cycle","type":"related"},{"name":"sensitive to BE49385A during vegetative growth","type":"exact"},{"name":"sensitive to YW3548","type":"exact"}],"termid":"FYPO:0004560"}


id: PR:Q10328
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- phx1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox transcription factor phx1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC32A11.03c","synonyms":[{"name":"Spom972h-phx1","type":"exact"}],"termid":"PR:Q10328"}


id: PR:Q9UTJ4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cgr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTJ4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA-processing protein cgr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1556.05c","synonyms":[{"name":"Spom972h-cgr1","type":"exact"}],"termid":"PR:Q9UTJ4"}


id: GO:0045146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The activation, by acetate, of the chemical reactions and pathways resulting in the breakdown of acetate.","definition_xrefs":["PMID:11741859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"initiation of acetate catabolic process","termid":"GO:0043077"},{"relation_name":"part_of","term_name":"response to acetate","termid":"GO:0010034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"initiation of acetate catabolic process by acetate","synonyms":[{"name":"initiation of acetate breakdown by acetate","type":"exact"},{"name":"initiation of acetate degradation by acetate","type":"exact"}],"termid":"GO:0045146"}


id: GO:0098653
data:
  {"annotated_genes":["SJAG_01613","SJAG_02761","SJAG_01745","SJAG_00727","SJAG_01805","SJAG_03540","SJAG_00794","SJAG_05196","SJAG_03683","SJAG_02737","SJAG_02624","SJAG_04076","SJAG_02814"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85659,113016,87393,98882],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072766"},{"annotations":[111991,98499,114724,91371,89853,105195,96442,114207,95281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990571"}]},"cv_name":"biological_process","definition":"The process by which centromeres/kinetochores become localized to clusters.","definition_xrefs":["PMID:10761928","GOC:di","GOC:dos","PMID:23283988","PMID:8486732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome localization","termid":"GO:0050000"},{"relation_name":"is_a","term_name":"centromere localization","termid":"GO:0072765"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00727":null,"SJAG_00794":null,"SJAG_01613":null,"SJAG_01745":null,"SJAG_01805":null,"SJAG_02624":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02814":null,"SJAG_03540":null,"SJAG_03683":null,"SJAG_04076":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"centromere clustering","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0098587"],"synonyms":[{"name":"kinetochore clustering","type":"exact"}],"termid":"GO:0098653","terms_by_termid":{"GO:0072766":null,"GO:1990571":null}}


id: PBO:0082070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-phosphoglycerate dehydrogenase and alpha-ketoglutarate reductase; 3PG dehydrogenase that catalyzes the first step in serine and glycine biosynthesis; also functions as an alpha-ketoglutarate reductase, converting alpha-ketoglutarate to D-2-hydroxyglutarate (D-2HG); localizes to the cytoplasm; SER33 has a paralog, SER3, that arose from the whole genome duplication","termid":"PBO:0082070"}


id: GO:0004653
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. This reaction is the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis.","definition_xrefs":["ISBN:0879695595","EC:2.4.1.41"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylgalactosaminyltransferase activity","termid":"GO:0008376"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9694438","Reactome:R-HSA-9683760","Reactome:R-HSA-5096537","Reactome:R-HSA-5096532","MetaCyc:2.4.1.41-RXN","Reactome:R-HSA-913675","Reactome:R-HSA-8851619"],"synonyms":[{"name":"UDP-GalNAc:polypeptide N-acetylgalactosaminyl transferase activity","type":"related"},{"name":"UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetyl-D-galactosamine:polypeptide N-acetylgalactosaminyl-transferase activity","type":"related"},{"name":"UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylgalactosamine-glycoprotein N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylgalactosamine-protein N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylgalactosamine:kappa-casein polypeptide N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylgalactosamine:polypeptide N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylgalactosamine:protein N-acetylgalactosaminyl transferase activity","type":"related"},{"name":"UDP-acetylgalactosamine-glycoprotein acetylgalactosaminyltransferase activity","type":"related"},{"name":"UDP-acetylgalactosamine:peptide-N-galactosaminyltransferase activity","type":"related"},{"name":"glycoprotein acetylgalactosaminyltransferase activity","type":"related"},{"name":"polypeptide-N-acetylgalactosamine transferase activity","type":"related"},{"name":"protein-UDP acetylgalactosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylgalactosamine-glycoprotein acetylgalactosaminyltransferase activity","type":"related"}],"termid":"GO:0004653"}


id: PBO:0049376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIIA pseudogene 6","termid":"PBO:0049376"}


id: GO:0090169
data:
  {"annotated_genes":["SJAG_02332","SJAG_04464"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"},{"annotations":[107072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901673"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of spindle assembly. Spindle assembly is the aggregation, arrangement and bonding together of a set of components to form the spindle, the array of microtubules and associated molecules that serves to move duplicated chromosomes apart.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spindle organization","termid":"GO:0090224"},{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"spindle assembly","termid":"GO:0051225"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02332":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0007049","GO:0000226","GO:0044085"],"is_obsolete":false,"name":"regulation of spindle assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of spindle formation","type":"exact"}],"termid":"GO:0090169","terms_by_termid":{"GO:0110161":null,"GO:1901673":null}}


id: PBO:0046167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E74 like ETS transcription factor 4","termid":"PBO:0046167"}


id: PBO:0088833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saccharopine dehydrogenase","termid":"PBO:0088833"}


id: PBO:0087003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein (RhoGAP); contains RhoGAP activity specific for both Rho1p and Cdc42p, and potentially Rho4p; acts with the RhoGAP Bem3p to negatively regulate Cdc42p-dependent signal transduction; involved in the control of cytoskeleton organization and cellular morphogenesis; required for bud emergence and for the morphogenesis checkpoint in response to actin depolymerization; localizes to sites of polarized growth and the plasma membrane","termid":"PBO:0087003"}


id: PBO:0079696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like 5 pseudogene 4","termid":"PBO:0079696"}


id: PBO:0065042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELID1 pseudogene 7","termid":"PBO:0065042"}


id: PBO:0081491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 385C","termid":"PBO:0081491"}


id: GO:1904236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of substrate-dependent cell migration, cell attachment to substrate.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25834989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-substrate adhesion","termid":"GO:0010812"},{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"regulation of substrate-dependent cell migration, cell attachment to substrate","termid":"GO:1904235"},{"relation_name":"negatively_regulates","term_name":"substrate-dependent cell migration, cell attachment to substrate","termid":"GO:0006931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of substrate-dependent cell migration, cell attachment to substrate","synonyms":[{"name":"down regulation of substrate-bound cell migration, cell attachment to substrate","type":"exact"},{"name":"down regulation of substrate-dependent cell migration, cell attachment to substrate","type":"exact"},{"name":"down-regulation of substrate-bound cell migration, cell attachment to substrate","type":"exact"},{"name":"down-regulation of substrate-dependent cell migration, cell attachment to substrate","type":"exact"},{"name":"downregulation of substrate-bound cell migration, cell attachment to substrate","type":"exact"},{"name":"downregulation of substrate-dependent cell migration, cell attachment to substrate","type":"exact"},{"name":"inhibition of substrate-bound cell migration, cell attachment to substrate","type":"narrow"},{"name":"inhibition of substrate-dependent cell migration, cell attachment to substrate","type":"narrow"},{"name":"negative regulation of substrate-bound cell migration, cell attachment to substrate","type":"exact"}],"termid":"GO:1904236"}


id: PBO:0080385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting 13 homolog C","termid":"PBO:0080385"}


id: GO:0052106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a community of single-celled organisms living in intimate contact with a host organism monitors population density by detecting the concentration of small diffusible signal molecules. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete quorum sensing involved in interaction with host (obsolete GO:0052106)","synonyms":[{"name":"quorum sensing during interaction with host","type":"related"}],"termid":"GO:0052106"}


id: PBO:0051053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 2-21","termid":"PBO:0051053"}


id: GO:0050537
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-mandelamide + H2O = (R)-mandelate + NH4.","definition_xrefs":["RHEA:22876","EC:3.5.1.86"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"mandelamide amidase activity","secondary_identifiers":["KEGG_REACTION:R05783","MetaCyc:3.5.1.86-RXN"],"synonyms":[{"name":"Pseudomonas mandelamide hydrolase activity","type":"related"},{"name":"mandelamide hydrolase activity","type":"related"}],"termid":"GO:0050537"}


id: PBO:0082812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved cysteine protease required for autophagy; cleaves Atg8p to a form required for autophagosome and Cvt vesicle generation","termid":"PBO:0082812"}


id: GO:0098815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of excitatory postsynaptic potential (EPSP). EPSP is a process that leads to a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of nervous system process","termid":"GO:0031644"},{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"},{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"regulates","term_name":"excitatory postsynaptic potential","termid":"GO:0060079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"modulation of excitatory postsynaptic potential","termid":"GO:0098815"}


id: PBO:0054663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2069","termid":"PBO:0054663"}


id: PBO:0043096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate sulfotransferase 8","termid":"PBO:0043096"}


id: PBO:0056389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPK activated protein kinase 5","termid":"PBO:0056389"}


id: PBO:0047848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(1)(p36)","termid":"PBO:0047848"}


id: PBO:0041275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1q and TNF related 2","termid":"PBO:0041275"}


id: GO:0042711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Female behaviors associated with the care and rearing of offspring.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parental behavior","termid":"GO:0060746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maternal behavior","synonyms":[{"name":"maternal behaviour","type":"exact"}],"termid":"GO:0042711"}


id: PBO:0078209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 7-2","termid":"PBO:0078209"}


id: PATO:0002044
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being a quadrilateral with two parallel sides.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quadrangular","termid":"PATO:0001988"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trapezoid","synonyms":[{"name":"trapezoidal","type":"exact"}],"termid":"PATO:0002044"}


id: GO:0008388
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: testosterone + donor-H2 + O2 = 15-alpha-hydroxytestosterone + H2O.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"testosterone 15-alpha-hydroxylase activity","synonyms":[{"name":"cytochrome P450 CYP2A4","type":"narrow"}],"termid":"GO:0008388"}


id: PBO:0055735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leiomodin 1","termid":"PBO:0055735"}


id: PBO:0003003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidase (predicted)","termid":"PBO:0003003"}


id: PBO:0110190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial membrane protein involved in heme biosynthesis, TMEM14 superfamily Aim19","termid":"PBO:0110190"}


id: PBO:0076124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin binding protein 6","termid":"PBO:0076124"}


id: GO:0019766
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an immunoglobulin of an IgA isotype via the Fc region, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin receptor activity","termid":"GO:0019763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"IgA receptor activity","termid":"GO:0019766"}


id: PBO:0075888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 pseudogene 1","termid":"PBO:0075888"}


id: GO:0006132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydrolipoylprotein reduction (obsolete GO:0006132)","synonyms":[{"name":"dihydrolipoylprotein reduction","type":"exact"}],"termid":"GO:0006132"}


id: GO:0062033
data:
  {"annotated_genes":["SJAG_04259","SJAG_02336","SJAG_01297","SJAG_02451","SJAG_00883","SJAG_03126","SJAG_04597","SJAG_01679","SJAG_00082","SJAG_02169","SJAG_03681","SJAG_03353"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108019,99958,95647,110333,86782,103284,109845,104306,111967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[90259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[90471,86066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902846"}]},"cv_name":"biological_process","definition":"Any process that starts or increases the frequency, rate or extent of sister chromatid segregation during mitosis.","definition_xrefs":["PMID:12773390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic sister chromatid segregation","termid":"GO:0033047"},{"relation_name":"is_a","term_name":"positive regulation of chromosome segregation","termid":"GO:0051984"},{"relation_name":"is_a","term_name":"positive regulation of chromosome organization","termid":"GO:2001252"},{"relation_name":"positively_regulates","term_name":"mitotic sister chromatid segregation","termid":"GO:0000070"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00883":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04259":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0000070"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0000070"],"is_obsolete":false,"name":"positive regulation of mitotic sister chromatid segregation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0062033","terms_by_termid":{"GO:0140499":null,"GO:1902426":null,"GO:1902846":null}}


id: GO:0038179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by neurotrophin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. Neurotrophins are a family of secreted growth factors that induce the survival, development, and function of neurons.","definition_xrefs":["GOC:signaling","GOC:bf","GOC:jc","Wikipedia:Neurotrophin","PMID:17466268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"part_of","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"neurotrophin signaling pathway","synonyms":[{"name":"neurotrophin receptor signaling pathway","type":"exact"}],"termid":"GO:0038179"}


id: PBO:0084837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal component of the small subunit","termid":"PBO:0084837"}


id: PBO:0084903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial tryptophanyl-tRNA synthetase","termid":"PBO:0084903"}


id: PBO:0042062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 125","termid":"PBO:0042062"}


id: PBO:0080636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 83 opposite strand","termid":"PBO:0080636"}


id: GO:0103084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-(4'-methylthio)butylmalate = H+ + 2-oxo-7-methylthioheptanoate + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete methylthiobutylmalate dehydrogenase activity (obsolete GO:0103084)","termid":"GO:0103084"}


id: PBO:0083431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YGR294W","termid":"PBO:0083431"}


id: PBO:0047003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A6, pseudogene","termid":"PBO:0047003"}


id: PBO:0035868
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromosome_morphology_during_cellular_response_to_acetaldehyde","termid":"PBO:0035868"}


id: GO:1902205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of interleukin-2-mediated signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:11909529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"regulates","term_name":"interleukin-2-mediated signaling pathway","termid":"GO:0038110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-2-mediated signaling pathway","synonyms":[{"name":"regulation of IL-2-mediated signaling pathway","type":"exact"},{"name":"regulation of interleukin-2-mediated signalling pathway","type":"exact"}],"termid":"GO:1902205"}


id: GO:0071427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a ribonucleoprotein complex that contains messenger RNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mRNA-containing ribonucleoprotein complex export from nucleus (obsolete GO:0071427)","synonyms":[{"name":"mRNA-containing RNP export from nucleus","type":"exact"},{"name":"mRNA-containing ribonucleoprotein complex export from cell nucleus","type":"exact"},{"name":"mRNA-containing ribonucleoprotein complex nucleus export","type":"exact"},{"name":"mRNA-containing ribonucleoprotein complex transport from nucleus to cytoplasm","type":"exact"}],"termid":"GO:0071427"}


id: PBO:0002782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex histone acetyltransferase catalytic subunit Gcn5","termid":"PBO:0002782"}


id: PBO:0049036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 25","termid":"PBO:0049036"}


id: GO:0090681
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A G protein-coupled receptor activity that is responsible for the sense of taste.","definition_xrefs":["GOC:tb","GOC:hat"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"taste receptor activity","termid":"GO:0008527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"GPCR taste receptor activity","synonyms":[{"name":"G-protein coupled taste receptor activity","type":"exact"},{"name":"G-protein-coupled taste receptor activity","type":"exact"}],"termid":"GO:0090681"}


id: PBO:0113097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydrouridine synthase; member of a family of dihydrouridine synthases including Dus1p, Smm1p, Dus3p, and Dus4p; modifies uridine residues at position 20 of the D loop of cytoplasmic pre-tRNAs","termid":"PBO:0113097"}


id: PBO:0079724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream binding transcription factor","termid":"PBO:0079724"}


id: PBO:0060002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 22","termid":"PBO:0060002"}


id: MOD:00621
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:302","PubMed:15939799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"menadione quinone derivative","synonyms":[{"name":"Menadione","type":"related"},{"name":"Menadione quinone derivative","type":"related"}],"termid":"MOD:00621"}


id: GO:0052590
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: sn-glycerol 3-phosphate + a ubiquinone = glycerone phosphate + a ubiquinol.","definition_xrefs":["MetaCyc:RXN0-5260"],"gene_count":0,"genotype_count":0,"name":"obsolete sn-glycerol-3-phosphate:ubiquinone oxidoreductase activity (obsolete GO:0052590)","termid":"GO:0052590"}


id: FYECO:0000434
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed on normal medium after a short incubation in medium containing hydroxyurea.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient hydroxyurea treatment","secondary_identifiers":["PMID:37200372"],"synonyms":[{"name":"acute hydroxyurea treatment","type":"broad"}],"termid":"FYECO:0000434"}


id: PBO:0047884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(5)(p14)","termid":"PBO:0047884"}


id: PBO:0059440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A10","termid":"PBO:0059440"}


id: GO:0102448
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: rhamnetin + S-adenosyl-L-methionine = 7,4'-O-dimethylquercetin + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:74731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"rhamnetin 4'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13934"],"termid":"GO:0102448"}


id: GO:0047670
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: anhydrotetracycline + H+ + NADPH + O2 = 12-dehydrotetracycline + H2O + NADP+.","definition_xrefs":["RHEA:11976","EC:1.14.13.38"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"anhydrotetracycline monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R04060","MetaCyc:ANHYDROTETRACYCLINE-MONOOXYGENASE-RXN"],"synonyms":[{"name":"ATC oxygenase activity","type":"related"},{"name":"anhydrotetracycline oxygenase activity","type":"related"},{"name":"anhydrotetracycline,NADPH:oxygen oxidoreductase (6-hydroxylating)","type":"related"}],"termid":"GO:0047670"}


id: PBO:0086120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for export of the ribosomal subunits; associates with the RNA components of the pre-ribosomes; has a role in nuclear import in association with Pse1p; also plays a role in the cell cycle and the DNA damage response; contains HEAT-repeats","termid":"PBO:0086120"}


id: PBO:0018224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med1","termid":"PBO:0018224"}


id: GO:0052591
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: sn-glycerol 3-phosphate + ubiquinone-8 = glycerone phosphate + ubiquinol-8.","definition_xrefs":["MetaCyc:GLYC3PDEHYDROG-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity (obsolete GO:0052591)","termid":"GO:0052591"}


id: PR:Q9Y7X9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA/RNA-binding protein KIN17 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03308","PANTHER:PTHR12805:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIN17-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.09c","secondary_identifiers":["UniProtKB:Q9Y7X9"],"synonyms":[{"name":"Spom972h-KIN","type":"exact"}],"termid":"PR:Q9Y7X9"}


id: PBO:0113134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Formin inhibitor; inhibits Bnr1p-mediated actin filament nucleation but not elongation during vegetative growth; performs distinct but overlapping roles with Hof1p to control actin cable assembly and polarized secretion; spatially focuses Bni1p at mating projection tips, and with Bud6p organizes Bni1p into clusters that nucleate actin assembly during mating projection formation; bnr1 bil2 double mutants are inviable; localizes to the cytosol, secretory vesicles and sites of polarized growth","termid":"PBO:0113134"}


id: PR:O74456
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pef1 gene.","definition_xrefs":["UniProtKB:O74456","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase pef1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.11","synonyms":[{"name":"PHO85 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pef1","type":"exact"},{"name":"cyclin-dependent kinase pef1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74456"}


id: FYPO:0005625
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a normal proportion of cells in the population remains viable after exposure to ultraviolet light during S phase of the mitotic cell cycle.","definition_xrefs":["PMID:26652183","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal viability following cellular response to UV","termid":"FYPO:0004662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"normal viability following cellular response to UV during mitotic S phase","synonyms":[{"name":"normal cell population viability following cellular response to UV during mitotic S phase","type":"exact"},{"name":"normal viability following UV exposure during mitotic S phase","type":"exact"},{"name":"normal viability following cellular response to UV during S phase of mitotic cell cycle","type":"exact"},{"name":"normal viability following cellular response to ultraviolet light during mitotic S phase","type":"exact"}],"termid":"FYPO:0005625"}


id: PBO:0064939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyglutamine binding protein 1","termid":"PBO:0064939"}


id: GO:1901283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 5,6,7,8-tetrahydromethanopterin.","definition_xrefs":["UniPathway:UPA00065","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"},{"relation_name":"is_a","term_name":"tetrahydromethanopterin metabolic process","termid":"GO:2001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"5,6,7,8-tetrahydromethanopterin metabolic process","synonyms":[{"name":"5,6,7,8-tetrahydromethanopterin metabolism","type":"exact"}],"termid":"GO:1901283"}


id: PBO:0091779
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"morphological and kinase-inhibitor super-sensitive","termid":"PBO:0091779"}


id: PBO:0059773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 47","termid":"PBO:0059773"}


id: PBO:0041607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase activity and apoptosis inhibitor 1","termid":"PBO:0041607"}


id: SO:0001425
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A read produced by ligation based sequencing technologies.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"read","termid":"SO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligation_based_read","synonyms":[{"name":"ligation based read","type":"related"}],"termid":"SO:0001425"}


id: GO:0099400
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane microdomain that forms a necklace around the bulb (crater) of a caveola. Intramembrane particles are concentrated in this region and cytoskeletal components, including actin, are highly enriched in the area underlying it.","definition_xrefs":["PMID:17227843","GOC:pad","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"},{"relation_name":"is_a","term_name":"membrane microdomain","termid":"GO:0098857"},{"relation_name":"part_of","term_name":"caveola","termid":"GO:0005901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"caveola neck","termid":"GO:0099400"}


id: PBO:0060478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NANOGNB pseudogene 3","termid":"PBO:0060478"}


id: PBO:0071841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 36","termid":"PBO:0071841"}


id: GO:0042102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of T cell proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell proliferation","termid":"GO:0042129"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte proliferation","termid":"GO:0050671"},{"relation_name":"is_a","term_name":"positive regulation of T cell activation","termid":"GO:0050870"},{"relation_name":"positively_regulates","term_name":"T cell proliferation","termid":"GO:0042098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell proliferation","synonyms":[{"name":"activation of T cell proliferation","type":"narrow"},{"name":"positive regulation of T lymphocyte proliferation","type":"exact"},{"name":"positive regulation of T-lymphocyte proliferation","type":"exact"},{"name":"stimulation of T cell proliferation","type":"narrow"},{"name":"up regulation of T cell proliferation","type":"exact"},{"name":"up-regulation of T cell proliferation","type":"exact"},{"name":"upregulation of T cell proliferation","type":"exact"}],"termid":"GO:0042102"}


id: GO:1904374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a kainic acid stimulus.","definition_xrefs":["GO_REF:0000071","PMID:17443789","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to kainic acid","termid":"GO:1904373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to kainic acid","termid":"GO:1904374"}


id: FYPO:0006373
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in one or more heterochromatin islands occurs to a greater extent than normal.","definition_xrefs":["PMID:29214404","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000873"},{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation at heterochromatin island during vegetative growth","termid":"FYPO:0003746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0002494","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H3-K9 dimethylation at heterochromatin island during vegetative growth","synonyms":[{"name":"increased histone H3 K9 dimethylation at heterochromatin island during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 dimethylation at heterochromatin island during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 dimethylation at heterochromatin island during vegetative growth","type":"exact"},{"name":"increased histone H3K9me2 at heterochromatin island during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 dimethylation at heterochromatin island during vegetative growth","type":"exact"}],"termid":"FYPO:0006373"}


id: PBO:0061998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily G member 1 pseudogene","termid":"PBO:0061998"}


id: RO:0001022
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation between a condition (a phenotype or disease) of a host and a material entity, in which the material entity is not part of the host, and is considered harmless to non-allergic hosts, and the condition results in pathological processes that include an abnormally strong immune response against the material entity.","direct_ancestors":[{"relation_name":"is_a","term_name":"causes_or_contributes_to_condition","termid":"RO:0003302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_allergic_trigger","termid":"RO:0001022"}


id: GO:0042944
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of D-alanine from one side of a membrane to the other. D-alanine is the D-enantiomer of 2-aminopropanoic acid.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanine transmembrane transporter activity","termid":"GO:0022858"},{"relation_name":"is_a","term_name":"D-amino acid transmembrane transporter activity","termid":"GO:0042943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"D-alanine transmembrane transporter activity","synonyms":[{"name":"D-alanine transporter activity","type":"broad"}],"termid":"GO:0042944"}


id: GO:0004495
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (R)-mevalonate + acceptor = mevaldate + reduced acceptor.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete mevaldate reductase activity (obsolete GO:0004495)","termid":"GO:0004495"}


id: GO:0031469
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An organelle found in bacteria consisting of a proteinaceous coat containing metabolic enzymes whose purpose is the sequestration or concentration of metabolites and which has the appearance of a polygonal granule by electron microscopy.","definition_xrefs":["GOC:js","PMID:10498708","PMID:34058518","PMID:34340100","PMID:11844753","PMID:12923081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial microcompartment","synonyms":[{"name":"BAC","type":"broad"},{"name":"BMC","type":"broad"},{"name":"MCP","type":"broad"},{"name":"polyhedral organelle","type":"related"}],"termid":"GO:0031469"}


id: PBO:0002997
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.2.1.22","termid":"PBO:0002997"}


id: PBO:0088214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger C2H2-type","termid":"PBO:0088214"}


id: PBO:0047145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 180 member A","termid":"PBO:0047145"}


id: FYPO:0005899
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actin filament-based movement is normal (i.e. indistinguishable from wild type). Actin filament-based movement is the movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins.","definition_xrefs":["PomBase:mah","PMID:19570908","GO:0030048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actin cytoskeleton organization","termid":"FYPO:0001366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal rate of actin filament-based movement","synonyms":[{"name":"normal rate of actin filament-based movement during mitotic cell cycle","type":"related"},{"name":"normal rate of actin filament-based movement during vegetative growth","type":"exact"}],"termid":"FYPO:0005899"}


id: PBO:0047436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCF1 pseudogene 7","termid":"PBO:0047436"}


id: PBO:0047627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXO induced long non-coding RNA 1","termid":"PBO:0047627"}


id: GO:0046216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of indole phytoalexins, any indole compound produced by plants as part of their defense response.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole-containing compound catabolic process","termid":"GO:0042436"},{"relation_name":"is_a","term_name":"indole phytoalexin metabolic process","termid":"GO:0046217"},{"relation_name":"is_a","term_name":"detoxification of nitrogen compound","termid":"GO:0051410"},{"relation_name":"is_a","term_name":"phytoalexin catabolic process","termid":"GO:0052316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044248","GO:0098754"],"is_obsolete":false,"name":"indole phytoalexin catabolic process","synonyms":[{"name":"indole phytoalexin breakdown","type":"exact"},{"name":"indole phytoalexin catabolism","type":"exact"},{"name":"indole phytoalexin degradation","type":"exact"}],"termid":"GO:0046216"}


id: CHEBI:30746
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benzoic acid","termid":"CHEBI:30746"}


id: PBO:0081602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 526","termid":"PBO:0081602"}


id: GO:0070823
data:
  {"annotated_genes":["SJAG_03685"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[63898],"is_not":false,"summary":null,"term":"GO:0070823"}]},"cv_name":"cellular_component","definition":"A tetrameric histone deacetylase complex that contains a Class II deacetylase catalytic subunit. In S. cerevisiae it is composed of two Hda1p subunits along with Hda2p and Hda3p.","definition_xrefs":["GOC:mah","PMID:11287668","PMID:8663039","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase complex","termid":"GO:0000118"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03685":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991","GO:0005694","GO:0005654"],"is_obsolete":false,"name":"HDA1 complex","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:0070823","terms_by_termid":{"GO:0070823":null}}


id: PBO:0044923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DiGeorge syndrome critical region gene 11","termid":"PBO:0044923"}


id: PR:P40379
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rep1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional activator protein rec16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.06","synonyms":[{"name":"Spom972h-rep1","type":"exact"},{"name":"zinc finger protein rep1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40379"}


id: PBO:0036014
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_acetylation_at_silent_mating-type_cassette_during_vegetative_growth","termid":"PBO:0036014"}


id: PBO:0081781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 708","termid":"PBO:0081781"}


id: PBO:0085800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; contains sequence that closely resembles a J domain (typified by the E. coli DnaJ protein)","termid":"PBO:0085800"}


id: PBO:0110482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA antiviral response interferon signaling inducer","termid":"PBO:0110482"}


id: GO:1903076
data:
  {"annotated_genes":["SJAG_03970","SJAG_00030","SJAG_04597","SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[90467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"},{"annotations":[91914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903077"},{"annotations":[100702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903078"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to plasma membrane.","definition_xrefs":["GOC:BHF","GOC:rl","PMID:11602640","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell periphery","termid":"GO:1904375"},{"relation_name":"is_a","term_name":"regulation of protein localization to membrane","termid":"GO:1905475"},{"relation_name":"regulates","term_name":"protein localization to plasma membrane","termid":"GO:0072659"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_02392":null,"SJAG_03970":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0090003","GO:1905963"],"synonyms":[{"name":"regulation of establishment of protein localisation in plasma membrane","type":"related"},{"name":"regulation of establishment of protein localization in plasma membrane","type":"related"},{"name":"regulation of establishment of protein localization to plasma membrane","type":"related"},{"name":"regulation of protein localisation in plasma membrane","type":"related"},{"name":"regulation of protein localization in plasma membrane","type":"exact"},{"name":"regulation of protein targeting to plasma membrane","type":"related"},{"name":"regulation of protein-plasma membrane targeting","type":"related"}],"termid":"GO:1903076","terms_by_termid":{"GO:0042997":null,"GO:0140325":null,"GO:1903077":null,"GO:1903078":null}}


id: GO:1904415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of xenophagy.","definition_xrefs":["GOC:pad","GO_REF:0000058","GOC:PARL","PMID:21617041","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of macroautophagy","termid":"GO:0016241"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"regulates","term_name":"xenophagy","termid":"GO:0098792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006914"],"is_obsolete":false,"name":"regulation of xenophagy","termid":"GO:1904415"}


id: PBO:0079784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A5","termid":"PBO:0079784"}


id: PBO:0089574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras GAP Gap1","termid":"PBO:0089574"}


id: PBO:0029300
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_N-acetyl-D-glucosaminate_level_during_G0","termid":"PBO:0029300"}


id: GO:0032517
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed by the association of superoxide dismutase 1 (SOD1) with calcineurin; complex formation is implicated in activation of calcineurin by SOD1.","definition_xrefs":["PMID:17324120","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SOD1-calcineurin complex","termid":"GO:0032517"}


id: GO:0021773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a medium spiny neuron residing in the striatum.","definition_xrefs":["GOC:jid","GOC:cls","ISBN:0878937420","GO_REF:0000021","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"forebrain neuron differentiation","termid":"GO:0021879"},{"relation_name":"is_a","term_name":"GABAergic neuron differentiation","termid":"GO:0097154"},{"relation_name":"part_of","term_name":"striatum development","termid":"GO:0021756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striatal medium spiny neuron differentiation","synonyms":[{"name":"medium-sized spiny neuron differentiation","type":"exact"},{"name":"striatal MSN differentiation","type":"exact"}],"termid":"GO:0021773"}


id: PR:O43076
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein SHQ1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02840","PANTHER:PTHR12967:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein shq1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.13","secondary_identifiers":["UniProtKB:O43076"],"synonyms":[{"name":"Spom972h-SHQ1","type":"exact"}],"termid":"PR:O43076"}


id: PBO:0035932
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_trimethylation_at_centromere_during_vegetative_growth","termid":"PBO:0035932"}


id: GO:0120204
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methylcytosine + L-ascorbate + O2 = 5-glyceryl-methylcytosine + glyoxylate + CO2.","definition_xrefs":["PMID:31043749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"methylcytosine to 5-glyceryl-methylcytosine dioxygenase activity","termid":"GO:0120204"}


id: _global:is_consecutive_sequence_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"R is_consecutive_sequence_of R iff every instance of R is equivalent to a collection of instances of U:u1, u2, un, such that no pair of ux uy is overlapping and for all ux, it is adjacent to ux-1 and ux+1, with the exception of the initial and terminal u1,and un (which may be identical).","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_consecutive_sequence_of","termid":"_global:is_consecutive_sequence_of"}


id: PBO:0068569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 20, pseudogene","termid":"PBO:0068569"}


id: PBO:0032755
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the gene described as SPBC8D2.18c in Abe and Shimoda (2000) is SPBC8D2.19","termid":"PBO:0032755"}


id: PBO:0048479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosaminyl (N-acetyl) transferase 2 (I blood group)","termid":"PBO:0048479"}


id: PBO:0047755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOCAD antisense RNA 1","termid":"PBO:0047755"}


id: PBO:0042856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 70","termid":"PBO:0042856"}


id: PBO:0073704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SKI2 subunit of superkiller complex","termid":"PBO:0073704"}


id: GO:0047312
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyruvate + L-phenylalanine = phenylpyruvate + L-alanine.","definition_xrefs":["RHEA:13053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic-amino-acid transaminase activity","termid":"GO:0008793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016769"],"is_obsolete":false,"name":"L-phenylalanine-pyruvate transaminase activity","secondary_identifiers":["Reactome:R-HSA-893593","KEGG_REACTION:R00692","EC:2.6.1.58","MetaCyc:2.6.1.58-RXN"],"synonyms":[{"name":"L-histidine:pyruvate aminotransferase activity","type":"related"},{"name":"L-phenylalanine(L-histidine):pyruvate aminotransferase activity","type":"broad"},{"name":"L-phenylalanine:pyruvate aminotransferase activity","type":"exact"},{"name":"L-phenylalanine:pyruvate transaminase activity","type":"exact"},{"name":"histidine aminotransferase activity","type":"related"},{"name":"histidine:pyruvate aminotransferase activity","type":"related"},{"name":"phenylalanine (histidine) aminotransferase activity","type":"broad"},{"name":"phenylalanine(histidine) aminotransferase activity","type":"broad"},{"name":"phenylalanine(histidine) transaminase activity","type":"broad"},{"name":"phenylalanine(histidine):pyruvate aminotransferase activity","type":"broad"}],"termid":"GO:0047312"}


id: PBO:0076504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 4","termid":"PBO:0076504"}


id: GO:0052047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with a second organism mediated by a substance secreted by the first organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiotic process mediated by secreted substance (obsolete GO:0052047)","synonyms":[{"name":"interaction with other organism via secreted substance during symbiotic interaction","type":"related"},{"name":"interaction with other organism via secreted substance involved in symbiotic interaction","type":"related"}],"termid":"GO:0052047"}


id: PR:P41891
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gar2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P41891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein gar2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC140.02","synonyms":[{"name":"Spom972h-gar2","type":"exact"}],"termid":"PR:P41891"}


id: PBO:0084472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Master regulator that regulates transcript levels of the FLP1 gene; acts in concert with Rep2p to regulate transcript levels of the FLP1 gene that promotes plasmid copy amplification and 2-micron plasmid-inheritance; also autoregulates levels of its own transcript; both Rep1p and Rep2p are sumoylated which is important for function","termid":"PBO:0084472"}


id: PBO:0050522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox D10","termid":"PBO:0050522"}


id: FYECO:0000297
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sodium arsenite (NaAsO2) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ NaAsO2","synonyms":[{"name":"sodium arsenite added","type":"exact"}],"termid":"FYECO:0000297"}


id: PBO:0048707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine receptor alpha 4 (pseudogene)","termid":"PBO:0048707"}


id: PBO:0052042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kidney associated DCDC2 antisense RNA 1","termid":"PBO:0052042"}


id: PBO:0111759
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain","termid":"PBO:0111759"}


id: GO:0044162
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a host cell cytoplasmic vesicle.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"},{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"},{"relation_name":"part_of","term_name":"host cell cytoplasmic vesicle","termid":"GO:0044161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell cytoplasmic vesicle membrane","termid":"GO:0044162"}


id: GO:0048904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the anterior lateral line neuromast cupula over time, from its formation to the mature structure. The cupula is secreted by mantle cells and the ciliary bundles of all of the hair cells of the neuromast are embedded in it. The cupula provides a mechanical linkage between the hair cells and the external hydrodynamic environment. The cupula of superficial neuromasts grows continuously, while the height of the cupula of canal neuromasts is limited by canal diameter.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cupula development","termid":"GO:0048887"},{"relation_name":"part_of","term_name":"anterior lateral line neuromast development","termid":"GO:0048901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line neuromast cupula development","termid":"GO:0048904"}


id: FYPO:0003220
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at positions 9 and 14 of histone H3 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete normal histone H3-K9K14 acetylation during vegetative growth (obsolete FYPO:0003220)","synonyms":[{"name":"normal histone H3 K9K14 acetylation during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 and K14 acetylation during vegetative growth","type":"exact"},{"name":"normal histone H3-K9K14 acetylation during mitotic cell cycle","type":"related"},{"name":"normal histone lysine H3 K9K14 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0003220"}


id: PATO:0015006
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a structure by virtue of it consisting of many of repeated, similar or identical subunits, arranged in some orderly array.","definition_xrefs":["GOC:DOS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymeric","termid":"PATO:0015006"}


id: PBO:0086648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the nucleolus and nucleus; predicted to be involved in ribosome biogenesis","termid":"PBO:0086648"}


id: GO:0015278
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a channel that opens when a specific intracellular ligand has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly ligand-gated monoatomic ion channel activity","termid":"GO:0005217"},{"relation_name":"is_a","term_name":"ligand-gated calcium channel activity","termid":"GO:0099604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"intracellularly gated calcium channel activity","secondary_identifiers":["GO:0005218","Reactome:R-HSA-9717215"],"synonyms":[{"name":"calcium-release channel activity","type":"exact"},{"name":"intracellular ligand-gated calcium channel activity","type":"related"}],"termid":"GO:0015278"}


id: GO:0042953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of any conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"},{"relation_name":"is_a","term_name":"lipoprotein localization","termid":"GO:0044872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"lipoprotein transport","termid":"GO:0042953"}


id: PBO:0055010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2425","termid":"PBO:0055010"}


id: PBO:0065877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB28, member RAS oncogene family pseudogene 5","termid":"PBO:0065877"}


id: GO:0015011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an enzyme cofactor consisting of a tetrapyrrole structure containing nickel, such as the F-430 cofactor found in methyl-coenzyme M reductase.","definition_xrefs":["Wikipedia:Cofactor_F430","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole metabolic process","termid":"GO:0033013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"nickel-tetrapyrrole coenzyme metabolic process","synonyms":[{"name":"coenzyme F430 metabolic process","type":"narrow"},{"name":"nickel-tetrapyrrole coenzyme metabolism","type":"exact"}],"termid":"GO:0015011"}


id: SO:1000039
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tandem duplication where the individual regions are in the same orientation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tandem_duplication","termid":"SO:1000173"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"direct_tandem_duplication","synonyms":[{"name":"direct tandem duplication","type":"exact"}],"termid":"SO:1000039"}


id: GO:0033828
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sn-glycerol 3-phosphate + ADP-glucose = 2-O-(beta-D-glucosyl)-sn-glycerol 3-phosphate + ADP + H+.","definition_xrefs":["EC:2.4.1.213","RHEA:12881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"glucosylglycerol-phosphate synthase activity","secondary_identifiers":["KEGG_REACTION:R05328","MetaCyc:2.4.1.213-RXN"],"synonyms":[{"name":"ADP-glucose:sn-glycerol-3-phosphate 2-beta-D-glucosyltransferase activity","type":"related"},{"name":"ADPglucose:sn-glycerol-3-phosphate 2-beta-D-glucosyltransferase activity","type":"related"},{"name":"GG-phosphate synthase activity","type":"related"},{"name":"GGPS","type":"related"},{"name":"glucosyl-glycerol-phosphate synthase activity","type":"related"}],"termid":"GO:0033828"}


id: PBO:0079369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 3","termid":"PBO:0079369"}


id: FYPO:0006066
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of a protein to one or more alpha/beta tubulin heterodimers does not occur. The affected protein may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000702","FYPO:0000652"],"is_obsolete":false,"name":"abolished tubulin heterodimer binding","synonyms":[{"name":"abolished protein-protein interaction with tubulin dimer","type":"exact"},{"name":"abolished protein-protein interaction with tubulin heterodimer","type":"exact"},{"name":"abolished tubulin dimer binding","type":"exact"},{"name":"tubulin heterodimer binding abolished","type":"exact"}],"termid":"FYPO:0006066"}


id: GO:0019104
data:
  {"annotated_genes":["SJAG_03724","SJAG_05257","SJAG_01971","SJAG_01119","SJAG_02528","SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034042"},{"annotations":[92208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034043"},{"annotations":[92209,73252,90923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034039"},{"annotations":[97634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003905"},{"annotations":[97636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052820"},{"annotations":[97637,73523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008725"},{"annotations":[73529,97638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043916"},{"annotations":[92212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008534"},{"annotations":[92213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000703"},{"annotations":[90926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000701"},{"annotations":[109969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004844"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of damaged bases by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic/apyrimidinic (AP) site.","definition_xrefs":["PMID:11554296","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01119":null,"SJAG_01971":null,"SJAG_02261":null,"SJAG_02528":null,"SJAG_03724":null,"SJAG_05257":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0003674","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"DNA N-glycosylase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9629492","Reactome:R-HSA-9629499","Reactome:R-HSA-110232","Reactome:R-HSA-5649664","Reactome:R-HSA-9629149","Reactome:R-HSA-110248","Reactome:R-HSA-5649658","Reactome:R-HSA-110231","Reactome:R-HSA-9636008","Reactome:R-HSA-9629470","Reactome:R-HSA-9635996","Reactome:R-HSA-9629483","Reactome:R-HSA-9629497","Reactome:R-HSA-5221061","Reactome:R-HSA-110250","Reactome:R-HSA-9629216","GO:0008578","Reactome:R-HSA-110219","Reactome:R-HSA-5649673","Reactome:R-HSA-5649681","Reactome:R-HSA-110234","Reactome:R-HSA-110251","Reactome:R-HSA-110218","Reactome:R-HSA-110246","Reactome:R-HSA-5220959"],"synonyms":[{"name":"DNA glycosylase activity","type":"exact"},{"name":"endonuclease VIII activity","type":"related"}],"termid":"GO:0019104","terms_by_termid":{"GO:0000701":null,"GO:0000703":null,"GO:0003905":null,"GO:0004844":null,"GO:0008534":null,"GO:0008725":null,"GO:0034039":null,"GO:0034042":null,"GO:0034043":null,"GO:0043916":null,"GO:0052820":null}}


id: GO:0006760
data:
  {"annotated_genes":["SJAG_02225","SJAG_01766","SJAG_00106","SJAG_00529","SJAG_03712","SJAG_00815","SJAG_01466","SJAG_02408","SJAG_03224","SJAG_04156","SJAG_03914","SJAG_01198","SJAG_01126","SJAG_03275","SJAG_01616"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104397,108473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009257"},{"annotations":[67685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006761"},{"annotations":[110120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046452"},{"annotations":[100837,104398,86363,108474,100985,102125,109740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046656"},{"annotations":[110121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046655"},{"annotations":[100643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009396"},{"annotations":[102126,100986,109741,110123,86365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046654"},{"annotations":[94473,87354,108476,104399,100838,92706,90545,100644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035999"},{"annotations":[88990,100802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046901"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a folic acid-containing compound, i.e. any of a group of heterocyclic compounds based on the pteroic acid skeleton conjugated with one or more L-glutamic acid or L-glutamate units.","definition_xrefs":["GOC:ai","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"pteridine-containing compound metabolic process","termid":"GO:0042558"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00529":null,"SJAG_00815":null,"SJAG_01126":null,"SJAG_01198":null,"SJAG_01466":null,"SJAG_01616":null,"SJAG_01766":null,"SJAG_02225":null,"SJAG_02408":null,"SJAG_03224":null,"SJAG_03275":null,"SJAG_03712":null,"SJAG_03914":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"folic acid-containing compound metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"folate and derivative metabolic process","type":"exact"},{"name":"folate and derivative metabolism","type":"exact"},{"name":"folate-containing compound metabolic process","type":"exact"},{"name":"folate-containing compound metabolism","type":"exact"},{"name":"folic acid and derivative metabolic process","type":"exact"},{"name":"folic acid and derivative metabolism","type":"exact"},{"name":"folic acid-containing compound metabolism","type":"exact"},{"name":"vitamin B9 and derivative metabolic process","type":"exact"},{"name":"vitamin B9 and derivative metabolism","type":"exact"},{"name":"vitamin M and derivative metabolic process","type":"exact"},{"name":"vitamin M and derivative metabolism","type":"exact"}],"termid":"GO:0006760","terms_by_termid":{"GO:0006761":null,"GO:0009257":null,"GO:0009396":null,"GO:0035999":null,"GO:0046452":null,"GO:0046654":null,"GO:0046655":null,"GO:0046656":null,"GO:0046901":null}}


id: PBO:0057741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1471","termid":"PBO:0057741"}


id: PBO:0012309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"middle-meiotic transcription factor Cuf2","termid":"PBO:0012309"}


id: FYECO:0000263
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose (typically <2% w/v), salts, water and with L-glutamatic acid as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, glutamate nitrogen source","synonyms":[{"name":"EMMG","type":"related"},{"name":"PMG","type":"narrow"},{"name":"glucose minimal medium, glutamate nitrogen source","type":"exact"},{"name":"standard glucose minimal medium, glutamate nitrogen source","type":"related"}],"termid":"FYECO:0000263"}


id: GO:0106386
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3R-hydroxyacyl-CoA + NAD+ = 3-oxoacyl-CoA + NADH.","definition_xrefs":["PMID:25203508","PMID:19571038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(3R)-hydroxyacyl-CoA dehydrogenase (NAD+) activity","secondary_identifiers":["RHEA:32711","EC:1.1.1.n12"],"synonyms":[{"name":"(3R)-hydroxyacyl-CoA dehydrogenase (NAD) activity","type":"exact"}],"termid":"GO:0106386"}


id: PBO:0082979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic tryptophanyl-tRNA synthetase; aminoacylates tryptophanyl-tRNA; human homolog WARS can complement yeast null mutant","termid":"PBO:0082979"}


id: GO:0070353
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the zinc finger transcription factor GATA1, the LIM domain protein Lmo2 (RBTN2), the basic helix-loop-helix protein TAL1 and its binding partner TCF3. The complex is involved transcriptional regulation in hematopoiesis.","definition_xrefs":["PMID:7568177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"GATA1-TAL1-TCF3-Lmo2 complex","termid":"GO:0070353"}


id: PBO:0085199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Outer kinetochore protein and component of the Ctf3 subcomplex; binds to centromeric DNA in a Ctf19p-dependent manner; involved in chromosome segregation and minichromosome maintenance; orthologous to human centromere constitutive-associated network (CCAN) subunit CENP-K and fission yeast sim4","termid":"PBO:0085199"}


id: GO:0048056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire the specialized features of R3 and R4 photoreceptors. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor cell differentiation","termid":"GO:0001751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"R3/R4 cell differentiation","termid":"GO:0048056"}


id: PBO:0001228
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pheochromocytoma","termid":"PBO:0001228"}


id: PR:Q9P3W4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dli1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3W4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein intermediate light chain dil1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC458.04c","synonyms":[{"name":"Spom972h-dli1","type":"exact"}],"termid":"PR:Q9P3W4"}


id: GO:0034132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor 1 signaling pathway.","definition_xrefs":["PMID:16551253","PMID:17328678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of toll-like receptor 1 signaling pathway","termid":"GO:0034131"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor 1 signaling pathway","termid":"GO:0034130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of toll-like receptor 1 signaling pathway","synonyms":[{"name":"negative regulation of TLR1 signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor 1 signalling pathway","type":"exact"}],"termid":"GO:0034132"}


id: PBO:0042851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 61","termid":"PBO:0042851"}


id: PBO:0050336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1pseudogene 38","termid":"PBO:0050336"}


id: GO:0000161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A MAPK cascade that starts with the activation of a Ssk2/Win1 family MAP3K, which activates a Pbs2/Wis1 family MAP2K, resulting in the activation of a Hog1/Sty1 family MAPK. Hog1 then translocates from the cytosol into the nucleus where it affects the expression of a large number of genes. This cascade is activated by hyperosmolarity or other abiotic stresses and results in cellular responses such as cell cycle arrest.","definition_xrefs":["PMID:17604854","PMID:32794416","PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete osmosensory signaling MAPK cascade (obsolete GO:0000161)","synonyms":[{"name":"High Osmolarity Glycerol (HOG) MAPK pathway","type":"narrow"},{"name":"Hog1 MAPK pathway","type":"narrow"},{"name":"Hog1/Sty1 stress-activated MAPK cascade","type":"narrow"},{"name":"MAPK cascade involved in osmosensory signaling pathway","type":"exact"},{"name":"MAPKKK cascade during osmolarity sensing","type":"exact"},{"name":"MAPKKK cascade involved in osmosensory signaling pathway","type":"exact"},{"name":"MAPKKK cascade involved in osmosensory signalling pathway","type":"exact"},{"name":"activation of MAPK activity involved in osmosensory signaling pathway","type":"narrow"},{"name":"activation of MAPKK activity during osmolarity sensing","type":"narrow"},{"name":"activation of MAPKK activity involved in osmosensory signaling pathway","type":"narrow"},{"name":"activation of MAPKKK activity during osmolarity sensing","type":"narrow"},{"name":"activation of MAPKKK activity involved in osmosensory signaling pathway","type":"narrow"},{"name":"activation of Pbs2 kinase","type":"narrow"},{"name":"inactivation of MAPK activity involved in osmosensory signaling pathway","type":"narrow"},{"name":"osmolarity sensing, MAPKKK cascade","type":"exact"},{"name":"osmolarity sensing, activation of MAP kinase kinase activity","type":"narrow"},{"name":"osmolarity sensing, activation of MAP kinase kinase kinase activity","type":"narrow"},{"name":"osmolarity sensing, activation of MAPK activity","type":"narrow"},{"name":"osmolarity sensing, activation of MAPKK activity","type":"narrow"},{"name":"osmolarity sensing, activation of MAPKKK activity","type":"narrow"},{"name":"termination of MAPK activity during osmolarity sensing","type":"narrow"}],"termid":"GO:0000161"}


id: GO:0043181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of transporting a substance into, and confining within, a vacuole.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of location in cell","termid":"GO:0051651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"vacuolar sequestering","synonyms":[{"name":"retention in vacuole","type":"exact"},{"name":"sequestering in vacuole","type":"exact"},{"name":"sequestration in vacuole","type":"exact"},{"name":"storage in vacuole","type":"exact"},{"name":"vacuolar retention","type":"exact"},{"name":"vacuolar sequestration","type":"exact"},{"name":"vacuolar storage","type":"exact"}],"termid":"GO:0043181"}


id: PBO:0028366
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized_septum","termid":"PBO:0028366"}


id: PBO:0057903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3591","termid":"PBO:0057903"}


id: PBO:0082863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core Sm protein Sm D2; part of heteroheptameric complex (with Smb1p, Smd1p, Smd3p, Sme1p, Smx3p, and Smx2p) that is part of the spliceosomal U1, U2, U4, and U5 snRNPs; homolog of human Sm D2","termid":"PBO:0082863"}


id: PBO:0060213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mevalonate diphosphate decarboxylase","termid":"PBO:0060213"}


id: PBO:0050500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox B13","termid":"PBO:0050500"}


id: GO:0060440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process pertaining to the initial formation of a trachea from unspecified parts. The process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the trachea is recognizable. The trachea is the portion of the airway that attaches to the bronchi as it branches.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ formation","termid":"GO:0048645"},{"relation_name":"part_of","term_name":"trachea morphogenesis","termid":"GO:0060439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trachea formation","termid":"GO:0060440"}


id: PR:Q9UUJ3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rga9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUJ3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho-GTPase-activating protein 9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.16","synonyms":[{"name":"Spom972h-rga9","type":"exact"}],"termid":"PR:Q9UUJ3"}


id: GO:0048439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the flower are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"shoot system morphogenesis","termid":"GO:0010016"},{"relation_name":"is_a","term_name":"post-embryonic plant morphogenesis","termid":"GO:0090698"},{"relation_name":"part_of","term_name":"flower development","termid":"GO:0009908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flower morphogenesis","secondary_identifiers":["GO:0048411"],"termid":"GO:0048439"}


id: GO:0047452
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protoaphin aglucone = H2O + xanthoaphin.","definition_xrefs":["EC:4.2.1.73","RHEA:23876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"protoaphin-aglucone dehydratase (cyclizing) activity","secondary_identifiers":["KEGG_REACTION:R03742","MetaCyc:4.2.1.73-RXN"],"synonyms":[{"name":"protoaphin dehydratase (cyclizing)","type":"related"},{"name":"protoaphin dehydratase activity","type":"related"},{"name":"protoaphin-aglucone hydro-lyase (cyclizing)","type":"related"},{"name":"protoaphin-aglucone hydro-lyase (cyclizing; xanthoaphin-forming)","type":"related"}],"termid":"GO:0047452"}


id: PR:O74916
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An acetylornithine deacetylase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04163","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase M20 domain-containing protein C757.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.05c","secondary_identifiers":["UniProtKB:O74916"],"synonyms":[{"name":"Spom972h-argE","type":"exact"}],"termid":"PR:O74916"}


id: PBO:0046948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 74 member A1","termid":"PBO:0046948"}


id: PR:O60146
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- can1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C18H10.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.16","synonyms":[{"name":"Spom972h-can1","type":"exact"}],"termid":"PR:O60146"}


id: GO:1905306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac myofibril assembly.","definition_xrefs":["GOC:BHF","GO_REF:0000058","GOC:TermGenie","GOC:rl","PMID:16151019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"is_a","term_name":"positive regulation of organelle assembly","termid":"GO:1902117"},{"relation_name":"is_a","term_name":"positive regulation of supramolecular fiber organization","termid":"GO:1902905"},{"relation_name":"is_a","term_name":"regulation of cardiac myofibril assembly","termid":"GO:1905304"},{"relation_name":"positively_regulates","term_name":"cardiac myofibril assembly","termid":"GO:0055003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0030036"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"positive regulation of cardiac myofibril assembly","synonyms":[{"name":"activation of cardiac myofibril assembly","type":"narrow"},{"name":"activation of cardiac myofibril development","type":"narrow"},{"name":"activation of cardiac myofibril morphogenesis","type":"narrow"},{"name":"activation of heart myofibril assembly","type":"related"},{"name":"positive regulation of cardiac myofibril development","type":"exact"},{"name":"positive regulation of cardiac myofibril morphogenesis","type":"exact"},{"name":"positive regulation of heart myofibril assembly","type":"related"},{"name":"up regulation of cardiac myofibril assembly","type":"exact"},{"name":"up regulation of cardiac myofibril development","type":"exact"},{"name":"up regulation of cardiac myofibril morphogenesis","type":"exact"},{"name":"up regulation of heart myofibril assembly","type":"related"},{"name":"up-regulation of cardiac myofibril assembly","type":"exact"},{"name":"up-regulation of cardiac myofibril development","type":"exact"},{"name":"up-regulation of cardiac myofibril morphogenesis","type":"exact"},{"name":"up-regulation of heart myofibril assembly","type":"related"},{"name":"upregulation of cardiac myofibril assembly","type":"exact"},{"name":"upregulation of cardiac myofibril development","type":"exact"},{"name":"upregulation of cardiac myofibril morphogenesis","type":"exact"},{"name":"upregulation of heart myofibril assembly","type":"related"}],"termid":"GO:1905306"}


id: PBO:0045936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ephrin A1","termid":"PBO:0045936"}


id: PBO:0038750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR1A pseudogene 1","termid":"PBO:0038750"}


id: PBO:0061109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family pyrin domain containing 2","termid":"PBO:0061109"}


id: GO:0046233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 3-hydroxyphenylacetate, 1,3-benzenediol monoacetate, also known as resorcinol monoacetate.","definition_xrefs":["GOC:curator"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-hydroxyphenylacetate biosynthetic process (obsolete GO:0046233)","synonyms":[{"name":"3-hydroxyphenylacetate anabolism","type":"exact"},{"name":"3-hydroxyphenylacetate biosynthesis","type":"exact"},{"name":"3-hydroxyphenylacetate biosynthetic process","type":"exact"},{"name":"3-hydroxyphenylacetate formation","type":"exact"},{"name":"3-hydroxyphenylacetate synthesis","type":"exact"}],"termid":"GO:0046233"}


id: PBO:0064442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POC1 centriolar protein A","termid":"PBO:0064442"}


id: GO:0043063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the intracellular bridge. An intracellular bridge is a direct link between the cytoplasms of sister cells that allows cells to communicate with one another.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular structure organization","termid":"GO:0043062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intercellular bridge organization","synonyms":[{"name":"intercellular bridge organisation","type":"exact"},{"name":"intercellular bridge organization and biogenesis","type":"related"}],"termid":"GO:0043063"}


id: PBO:0043209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC28 protein kinase regulatory subunit 1B pseudogene 2","termid":"PBO:0043209"}


id: PBO:0064058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 92","termid":"PBO:0064058"}


id: PBO:0079196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 25, pseudogene","termid":"PBO:0079196"}


id: PBO:0059100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mortality factor 4 like 1 pseudogene 6","termid":"PBO:0059100"}


id: GO:1904955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any Wnt signaling pathway, planar cell polarity pathway that is involved in midbrain dopaminergic neuron differentiation.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","PMID:22988876","GOC:bf","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete planar cell polarity pathway involved in midbrain dopaminergic neuron differentiation (obsolete GO:1904955)","synonyms":[{"name":"PCP pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"PCP pathway involved in mDA neuron differentiation","type":"exact"},{"name":"PCP pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"PCP pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"PCP pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"Wnt receptor signaling pathway, planar cell polarity pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"Wnt receptor signaling pathway, planar cell polarity pathway involved in mDA neuron differentiation","type":"exact"},{"name":"Wnt receptor signaling pathway, planar cell polarity pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"Wnt receptor signaling pathway, planar cell polarity pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"Wnt receptor signaling pathway, planar cell polarity pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"Wnt receptor signalling pathway, planar cell polarity pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"Wnt receptor signalling pathway, planar cell polarity pathway involved in mDA neuron differentiation","type":"exact"},{"name":"Wnt receptor signalling pathway, planar cell polarity pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"Wnt receptor signalling pathway, planar cell polarity pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"Wnt receptor signalling pathway, planar cell polarity pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"Wnt signaling pathway, planar cell polarity pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"Wnt signaling pathway, planar cell polarity pathway involved in mDA neuron differentiation","type":"exact"},{"name":"Wnt signaling pathway, planar cell polarity pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"Wnt signaling pathway, planar cell polarity pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"Wnt signaling pathway, planar cell polarity pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"Wnt-JNK signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"related"},{"name":"Wnt-JNK signaling pathway involved in mDA neuron differentiation","type":"related"},{"name":"Wnt-JNK signaling pathway involved in midbrain DA neurogenesis","type":"related"},{"name":"Wnt-JNK signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"related"},{"name":"Wnt-JNK signaling pathway involved in midbrain dopaminergic neuron production","type":"related"},{"name":"Wnt-PCP signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"related"},{"name":"Wnt-PCP signaling pathway involved in mDA neuron differentiation","type":"related"},{"name":"Wnt-PCP signaling pathway involved in midbrain DA neurogenesis","type":"related"},{"name":"Wnt-PCP signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"related"},{"name":"Wnt-PCP signaling pathway involved in midbrain dopaminergic neuron production","type":"related"},{"name":"Wnt-activated signaling pathway, planar cell polarity pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"Wnt-activated signaling pathway, planar cell polarity pathway involved in mDA neuron differentiation","type":"exact"},{"name":"Wnt-activated signaling pathway, planar cell polarity pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"Wnt-activated signaling pathway, planar cell polarity pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"Wnt-activated signaling pathway, planar cell polarity pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"non-canonical Wnt signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"broad"},{"name":"non-canonical Wnt signaling pathway involved in mDA neuron differentiation","type":"broad"},{"name":"non-canonical Wnt signaling pathway involved in midbrain DA neurogenesis","type":"broad"},{"name":"non-canonical Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"broad"},{"name":"non-canonical Wnt signaling pathway involved in midbrain dopaminergic neuron production","type":"broad"},{"name":"non-canonical Wnt-mediated midbrain DA neuron differentiation","type":"broad"},{"name":"planar cell polarity pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"planar cell polarity pathway involved in mDA neuron differentiation","type":"exact"},{"name":"planar cell polarity pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"planar cell polarity pathway involved in midbrain dopaminergic neuron production","type":"exact"}],"termid":"GO:1904955"}


id: PBO:0000509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-diacylglycerol--inositol 3-phosphatidyltransferase Pis1 (predicted)","termid":"PBO:0000509"}


id: PBO:0090781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor zf-C2H2 type","termid":"PBO:0090781"}


id: PBO:0068844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 82, pseudogene","termid":"PBO:0068844"}


id: GO:1903672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sprouting angiogenesis.","definition_xrefs":["PMID:16756958","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of angiogenesis","termid":"GO:0045766"},{"relation_name":"is_a","term_name":"regulation of sprouting angiogenesis","termid":"GO:1903670"},{"relation_name":"positively_regulates","term_name":"sprouting angiogenesis","termid":"GO:0002040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sprouting angiogenesis","synonyms":[{"name":"activation of sprouting angiogenesis","type":"narrow"},{"name":"up regulation of sprouting angiogenesis","type":"exact"},{"name":"up-regulation of sprouting angiogenesis","type":"exact"},{"name":"upregulation of sprouting angiogenesis","type":"exact"}],"termid":"GO:1903672"}


id: GO:0097362
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A hexameric protein complex composed of MCM8 and MCM9 and involved in homologous recombination repair following DNA interstrand cross-links.","definition_xrefs":["PMID:22771115","PMID:22771120","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MCM complex","termid":"GO:0042555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"MCM8-MCM9 complex","termid":"GO:0097362"}


id: GO:0080082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of glucosidic link in esculin.","definition_xrefs":["PMID:15604686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"esculin beta-glucosidase activity","termid":"GO:0080082"}


id: PBO:0062932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl 3-hydroxylase family member 4 (inactive)","termid":"PBO:0062932"}


id: PR:O74857
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase III subunit RPC4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13408:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III subunit rpc4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.07","secondary_identifiers":["UniProtKB:O74857"],"synonyms":[{"name":"RNA polymerase III subunit C4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C53 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPCC18.07","type":"related"},{"name":"Spom972h-POLR3D","type":"exact"},{"name":"rpc4","type":"related"}],"termid":"PR:O74857"}


id: PBO:0058406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4776-1","termid":"PBO:0058406"}


id: GO:0005882
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins.","definition_xrefs":["ISBN:0198506732","PMID:17551517","PMID:17493611","PMID:7979242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polymeric cytoskeletal fiber","termid":"GO:0099513"},{"relation_name":"part_of","term_name":"intermediate filament cytoskeleton","termid":"GO:0045111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"intermediate filament","secondary_identifiers":["FMA:63851","NIF_Subcellular:sao952483289","Wikipedia:Intermediate_filament"],"synonyms":[{"name":"intermediate filament associated protein","type":"related"},{"name":"type I intermediate filament associated protein","type":"related"},{"name":"type II intermediate filament associated protein","type":"related"}],"termid":"GO:0005882"}


id: GO:2000272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a signaling receptor activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling receptor activity","termid":"GO:0010469"},{"relation_name":"is_a","term_name":"negative regulation of molecular function","termid":"GO:0044092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of signaling receptor activity","synonyms":[{"name":"negative regulation of receptor activity","type":"broad"},{"name":"negative regulation of signalling receptor activity","type":"exact"}],"termid":"GO:2000272"}


id: FYPO:0005223
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of histone H2B to chromatin at one or more protein-coding genes is decreased.","definition_xrefs":["PMID:23028377","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin at protein coding gene","termid":"FYPO:0008249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased histone H2B localization to chromatin at protein coding gene","synonyms":[{"name":"decreased histone H2B localisation to chromatin at protein coding gene","type":"exact"},{"name":"decreased histone H2B localization to chromatin at protein coding gene during mitotic cell cycle","type":"related"},{"name":"decreased histone H2B localization to chromatin at protein-coding gene during vegetative growth","type":"exact"},{"name":"reduced histone H2B localization to chromatin at protein coding gene","type":"exact"}],"termid":"FYPO:0005223"}


id: GO:0046833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of directed movement of RNA from the nucleus into the cytoplasm.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound transport","termid":"GO:0032241"},{"relation_name":"is_a","term_name":"positive regulation of nucleocytoplasmic transport","termid":"GO:0046824"},{"relation_name":"is_a","term_name":"regulation of RNA export from nucleus","termid":"GO:0046831"},{"relation_name":"positively_regulates","term_name":"RNA export from nucleus","termid":"GO:0006405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006913","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of RNA export from nucleus","synonyms":[{"name":"activation of RNA export from nucleus","type":"narrow"},{"name":"positive regulation of RNA export from cell nucleus","type":"exact"},{"name":"positive regulation of RNA export out of nucleus","type":"exact"},{"name":"positive regulation of RNA transport from nucleus to cytoplasm","type":"exact"},{"name":"positive regulation of RNA-nucleus export","type":"exact"},{"name":"stimulation of RNA export from nucleus","type":"narrow"},{"name":"up regulation of RNA export from nucleus","type":"exact"},{"name":"up-regulation of RNA export from nucleus","type":"exact"},{"name":"upregulation of RNA export from nucleus","type":"exact"}],"termid":"GO:0046833"}


id: PBO:0004902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoinositide biosynthesis protein (predicted)","termid":"PBO:0004902"}


id: GO:0090200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of release of cytochrome c from mitochondria, the process in which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation.","definition_xrefs":["GOC:dph","GOC:mtg_apoptosis","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of release of cytochrome c from mitochondria","termid":"GO:0090199"},{"relation_name":"positively_regulates","term_name":"release of cytochrome c from mitochondria","termid":"GO:0001836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"positively_regulates","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0008150","GO:0007005"],"is_obsolete":false,"name":"positive regulation of release of cytochrome c from mitochondria","termid":"GO:0090200"}


id: PBO:0005461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin complex, non-SMC subunit Rad21 (kleisin)","termid":"PBO:0005461"}


id: PBO:0046665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"embryonic stem cell related","termid":"PBO:0046665"}


id: GO:0044654
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: starch + H2O = alpha-D-glucose.","definition_xrefs":["PMID:18556189"],"gene_count":0,"genotype_count":0,"name":"obsolete starch alpha-glucosidase activity (obsolete GO:0044654)","termid":"GO:0044654"}


id: PBO:0056712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEMO1 pseudogene 4","termid":"PBO:0056712"}


id: GO:0016701
data:
  {"annotated_genes":["SJAG_00309","SJAG_03225","SJAG_00519"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100794],"is_not":false,"summary":null,"term":"GO:0016701"},{"annotations":[108491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010308"},{"annotations":[108492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010309"},{"annotations":[85900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102672"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and molecular oxygen is incorporated into a donor.","definition_xrefs":["EC:1.13.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00309":null,"SJAG_00519":null,"SJAG_03225":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, miscellaneous","type":"narrow"},{"name":"oxygenase","type":"broad"}],"termid":"GO:0016701","terms_by_termid":{"GO:0010308":null,"GO:0010309":null,"GO:0016701":null,"GO:0102672":null}}


id: PBO:0002310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate dehydrogenase (NAD+) subunit 1 Idh1","termid":"PBO:0002310"}


id: PBO:0067785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 87","termid":"PBO:0067785"}


id: PBO:0074555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 8","termid":"PBO:0074555"}


id: CHEBI:28187
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-(hydroxymethyl)serine","termid":"CHEBI:28187"}


id: PBO:0090089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved protein, expressed during meiotic cell cycle, possibly related to metazoan RAB11FIP4 family","termid":"PBO:0090089"}


id: PBO:0061175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (TTG) 5-1","termid":"PBO:0061175"}


id: PBO:0030860
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_medial_cortex_in_spores","termid":"PBO:0030860"}


id: PR:Q9USP1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An elongator complex protein 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12896:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex protein 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC11E10.06c","secondary_identifiers":["UniProtKB:Q9USP1"],"synonyms":[{"name":"SPCC11E10.06c","type":"related"},{"name":"Spom972h-ELP4","type":"exact"}],"termid":"PR:Q9USP1"}


id: PBO:0050699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 12B","termid":"PBO:0050699"}


id: PBO:0062691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily B member 2","termid":"PBO:0062691"}


id: GO:1901456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to toluene.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to toluene","termid":"GO:1901454"},{"relation_name":"positively_regulates","term_name":"response to toluene","termid":"GO:1901424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to toluene","synonyms":[{"name":"activation of response to toluene","type":"narrow"},{"name":"up regulation of response to toluene","type":"exact"},{"name":"up-regulation of response to toluene","type":"exact"},{"name":"upregulation of response to toluene","type":"exact"}],"termid":"GO:1901456"}


id: PBO:0034374
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transmitted_by","termid":"PBO:0034374"}


id: PBO:0064575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periostin","termid":"PBO:0064575"}


id: PBO:0042188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin C","termid":"PBO:0042188"}


id: FYPO:0007791
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell when the cell is subject to magnesium starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PMID:33970532","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA absent from cell during vegetative growth","termid":"FYPO:0003161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"RNA absent from cell during cellular response to magnesium starvation","synonyms":[{"name":"RNA absent from cell during cellular response to magnesium starvation during mitotic cell cycle","type":"related"},{"name":"RNA absent from cell during cellular response to magnesium starvation during vegetative growth","type":"exact"},{"name":"RNA absent from cell during magnesium depletion","type":"exact"},{"name":"RNA absent from cell during magnesium deprivation","type":"exact"},{"name":"RNA absent from cell during magnesium starvation","type":"exact"},{"name":"transcripts absent from cell during cellular response to magnesium starvation","type":"exact"},{"name":"undetectable RNA level during cellular response to magnesium starvation","type":"exact"}],"termid":"FYPO:0007791"}


id: GO:0110044
data:
  {"annotated_genes":["SJAG_03486","SJAG_01401","SJAG_05288","SJAG_01311","SJAG_03371","SJAG_04332","SJAG_02723","SJAG_04682","SJAG_02404","SJAG_00457","SJAG_04813","SJAG_03501","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90602,97680,98449,100959,105100],"is_not":false,"summary":null,"term":"GO:0110044"},{"annotations":[102693,102012,98425,105315,100498,101854,114427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110045"},{"annotations":[114291,112560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140648"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of mitotic to meiotic cell cycle switching, the process in which a cell switches cell cycle mode from mitotic to meiotic division.","definition_xrefs":["PMID:17674143","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle","termid":"GO:0007346"},{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of meiotic cell cycle","termid":"GO:0051445"},{"relation_name":"regulates","term_name":"cell cycle switching, mitotic to meiotic cell cycle","termid":"GO:0051728"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00457":null,"SJAG_01311":null,"SJAG_01401":null,"SJAG_02404":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03371":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_04332":null,"SJAG_04682":null,"SJAG_04813":null,"SJAG_05288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of cell cycle switching, mitotic to meiotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"sexual differentiation","type":"related"}],"termid":"GO:0110044","terms_by_termid":{"GO:0110044":null,"GO:0110045":null,"GO:0140648":null}}


id: PBO:0085144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar S-adenosylmethionine-dependent rRNA methyltransferase; methylates adenine (m1A) of large subunit (LSU) rRNA at position 2142; belongs to Rossmann fold superfamily; null mutant exhibits abnormal lipid metabolic phenotype; not an essential gene","termid":"PBO:0085144"}


id: FYPO:0005673
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of ubiquitinated protein measured the cell is lower than normal during a cellular response to methyl methanesulfonate. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during cellular response to methyl methanesulfonate","termid":"FYPO:0003143"},{"relation_name":"is_a","term_name":"decreased level of ubiquitinated protein in cell","termid":"FYPO:0005226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"decreased level of ubiquitinated protein in cell during cellular response to methyl methanesulfonate","synonyms":[{"name":"decreased accumulation of ubiquitinated protein in cell during cellular response to methyl methanesulfonate","type":"related"},{"name":"decreased level of ubiquitinated protein in cell during cellular response to MMS","type":"exact"},{"name":"decreased level of ubiquitinated protein in cell during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"decreased level of ubiquitinated protein in cell during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"decreased level of ubiquitylated protein in cell during cellular response to methyl methanesulfonate","type":"exact"},{"name":"decreased ubiquitinated protein level during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"reduced level of ubiquitinated protein in cell during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0005673"}


id: PBO:0003690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C3H1 type","termid":"PBO:0003690"}


id: PBO:0073234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO specific peptidase 7","termid":"PBO:0073234"}


id: PBO:0079114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA splicing endonuclease subunit 15 pseudogene 2","termid":"PBO:0079114"}


id: PBO:0054682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2090","termid":"PBO:0054682"}


id: PBO:0030794
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleus_localization_in_prospore","termid":"PBO:0030794"}


id: PBO:0059189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member E","termid":"PBO:0059189"}


id: PBO:0081433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 285C, pseudogene","termid":"PBO:0081433"}


id: PR:O42869
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spa2 gene.","definition_xrefs":["UniProtKB:O42869","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3G9.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G9.05","synonyms":[{"name":"Spom972h-spa2","type":"exact"}],"termid":"PR:O42869"}


id: FYPO:0006744
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is decreased during a cellular response to tschimganine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during vegetative growth","termid":"FYPO:0001129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to nucleus during cellular response to tschimganine","synonyms":[{"name":"decreased protein localisation to nucleus during cellular response to tschimganine","type":"exact"},{"name":"decreased protein localization to nucleus during cellular response to TMN","type":"exact"},{"name":"decreased protein localization to nucleus during cellular response to tschimganine during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to nucleus during cellular response to tschimganine during vegetative growth","type":"exact"},{"name":"reduced protein localization to nucleus during cellular response to tschimganine","type":"exact"}],"termid":"FYPO:0006744"}


id: PBO:0028697
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_degradation_of_middle_meiotic_gene_mRNA_during_late_meiosis","termid":"PBO:0028697"}


id: PR:Q9UTQ9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spc2 gene.","definition_xrefs":["UniProtKB:Q9UTQ9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase complex subunit spc2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1071.04c","synonyms":[{"name":"Spom972h-spc2","type":"exact"},{"name":"microsomal signal peptidase subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTQ9"}


id: PR:Q9UTE5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hri2 gene.","definition_xrefs":["UniProtKB:Q9UTE5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2-alpha kinase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC222.07c","synonyms":[{"name":"Spom972h-hri2","type":"exact"},{"name":"heme-regulated eukaryotic initiation factor eIF-2-alpha kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"heme-regulated inhibitor 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTE5"}


id: PBO:0089499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Nop9","termid":"PBO:0089499"}


id: PBO:0040362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP5MK pseudogene 1","termid":"PBO:0040362"}


id: GO:0006962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response against bacteria, specific to males and mediated through a body fluid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibacterial humoral response","termid":"GO:0019731"},{"relation_name":"is_a","term_name":"male-specific defense response to bacterium","termid":"GO:0050831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male-specific antibacterial humoral response","termid":"GO:0006962"}


id: GO:0031474
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A myosin complex containing one or more class IV myosin heavy chains and associated light chains; myosin IV is relatively uncharacterized, but is predicted to have a single motor domain, one IQ motif and a tail with a Myosin Tail Homology (myTH4) domain homologous to that in the tails of myosins VII and XV.","definition_xrefs":["Wikipedia:Myosin"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unconventional myosin complex","termid":"GO:0016461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0015629"],"is_obsolete":false,"name":"myosin IV complex","termid":"GO:0031474"}


id: SO:0000209
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding a ribosomal RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nc_primary_transcript","termid":"SO:0000483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA_primary_transcript","synonyms":[{"name":"rRNA primary transcript","type":"exact"},{"name":"ribosomal RNA primary transcript","type":"exact"}],"termid":"SO:0000209"}


id: GO:1900136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chemokine activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine activity","termid":"GO:0060300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of chemokine activity","termid":"GO:1900136"}


id: PBO:0087240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine kinase involved in cell cycle regulation and rDNA integrity; associated with late pre-40S particles via its conserved C-terminal domain; prevents premature use of pre-40S particles in translation; association with pre-40S particles regulated by its catalytic ATPase site and likely occurs after the release of Rio2p from these particles; involved in cell cycle progression and processing of the 20S pre-rRNA into mature 18S rRNA; phosphorylates Rpa43p in anaphase to remove Pol I from rDNA","termid":"PBO:0087240"}


id: PBO:0002155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fork head transcription factor Fhl1","termid":"PBO:0002155"}


id: GO:0032405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a MutLalpha mismatch repair complex.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair complex binding","termid":"GO:0032404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"MutLalpha complex binding","termid":"GO:0032405"}


id: PBO:0071702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 like","termid":"PBO:0071702"}


id: PBO:0063387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"programmed cell death 5 pseudogene 1","termid":"PBO:0063387"}


id: PBO:0050405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein C pseudogene 7","termid":"PBO:0050405"}


id: GO:0050459
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + phosphoethanolamine = acetaldehyde + NH4 + phosphate.","definition_xrefs":["EC:4.2.3.2","RHEA:17889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ethanolamine-phosphate phospho-lyase activity","secondary_identifiers":["KEGG_REACTION:R00748","MetaCyc:ETHANOLAMINE-PHOSPHATE-PHOSPHO-LYASE-RXN","Reactome:R-HSA-5696415"],"synonyms":[{"name":"O-phosphoethanolamine-phospholyase activity","type":"related"},{"name":"O-phosphorylethanol-amine phospho-lyase activity","type":"related"},{"name":"amino alcohol O-phosphate phospholyase activity","type":"broad"},{"name":"ethanolamine-phosphate phospho-lyase (deaminating)","type":"related"},{"name":"ethanolamine-phosphate phospho-lyase (deaminating; acetaldehyde-forming)","type":"related"}],"termid":"GO:0050459"}


id: PBO:0062889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OVOL1 antisense RNA 1","termid":"PBO:0062889"}


id: FYPO:0003228
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the oxidation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein modification during vegetative growth","termid":"FYPO:0000544"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"abolished protein oxidation during cellular response to hydrogen peroxide","synonyms":[{"name":"abolished protein oxidation during cellular response to H2O2","type":"exact"},{"name":"abolished protein oxidation during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"abolished protein oxidation during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"protein oxidation abolished during cellular response to hydrogen peroxide during vegetative growth","type":"exact"}],"termid":"FYPO:0003228"}


id: PBO:0038487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABCB10 pseudogene 3","termid":"PBO:0038487"}


id: SO:0000816
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that rescues.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"rescue","termid":"SO:0000814"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rescue_gene","synonyms":[{"name":"rescue gene","type":"exact"}],"termid":"SO:0000816"}


id: PBO:0074452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"smoothened, frizzled class receptor","termid":"PBO:0074452"}


id: GO:0018657
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: toluene + 1/2 O2 = 3-hydroxytoluene.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete toluene 3-monooxygenase activity (obsolete GO:0018657)","termid":"GO:0018657"}


id: PBO:0043928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-reactive protein","termid":"PBO:0043928"}


id: GO:0033325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of choline (2-hydroxyethyltrimethylammonium), via the intermediate phosphoryl-ethanolamine.","definition_xrefs":["GOC:mah","MetaCyc:PWY-3385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choline biosynthetic process","termid":"GO:0042425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"choline biosynthetic process via phosphoryl-ethanolamine","synonyms":[{"name":"choline anabolism via phosphoryl-ethanolamine","type":"exact"},{"name":"choline biosynthesis via phosphoryl-ethanolamine","type":"exact"},{"name":"choline formation via phosphoryl-ethanolamine","type":"exact"},{"name":"choline synthesis via phosphoryl-ethanolamine","type":"exact"}],"termid":"GO:0033325"}


id: PBO:0079343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 27, pseudogene","termid":"PBO:0079343"}


id: RO:0002333
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of enables","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"RO:0002328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enabled_by","termid":"RO:0002333"}


id: GO:0006111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gluconeogenesis, the formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucose metabolic process","termid":"GO:0010906"},{"relation_name":"is_a","term_name":"regulation of carbohydrate biosynthetic process","termid":"GO:0043255"},{"relation_name":"regulates","term_name":"gluconeogenesis","termid":"GO:0006094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"regulation of gluconeogenesis","secondary_identifiers":["GO:0090526"],"synonyms":[{"name":"regulation of gluconeogenesis involved in cellular glucose homeostasis","type":"related"},{"name":"regulation of glucose biosynthesis","type":"broad"},{"name":"regulation of glucose biosynthetic process","type":"broad"}],"termid":"GO:0006111"}


id: GO:1905358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of snRNA pseudouridine synthesis.","definition_xrefs":["GOC:TermGenie","PMID:27268497","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of RNA metabolic process","termid":"GO:0051254"},{"relation_name":"is_a","term_name":"regulation of snRNA pseudouridine synthesis","termid":"GO:1905356"},{"relation_name":"positively_regulates","term_name":"snRNA pseudouridine synthesis","termid":"GO:0031120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0016073"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016073"}],"interesting_parent_ids":["GO:0016073","GO:0008150"],"is_obsolete":false,"name":"positive regulation of snRNA pseudouridine synthesis","synonyms":[{"name":"activation of snRNA pseudouridine synthesis","type":"narrow"},{"name":"up regulation of snRNA pseudouridine synthesis","type":"exact"},{"name":"up-regulation of snRNA pseudouridine synthesis","type":"exact"},{"name":"upregulation of snRNA pseudouridine synthesis","type":"exact"}],"termid":"GO:1905358"}


id: GO:0110066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of mitotic telomere clustering during interphase.","definition_xrefs":["PMID:25778919","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of interphase mitotic telomere clustering","termid":"GO:0110065"},{"relation_name":"negatively_regulates","term_name":"interphase mitotic telomere clustering","termid":"GO:0120110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of interphase mitotic telomere clustering","synonyms":[{"name":"negative regulation of mitotic telomere clustering during interphase","type":"exact"},{"name":"telomere dispersion during interphase","type":"exact"}],"termid":"GO:0110066"}


id: PBO:0078226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 12-1 (pseudogene)","termid":"PBO:0078226"}


id: PBO:0073999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A5 antisense RNA 1","termid":"PBO:0073999"}


id: PBO:0083382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps CUP1-1","termid":"PBO:0083382"}


id: PBO:0084385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low-affinity inorganic phosphate (Pi) transporter; acts upstream of Pho81p in regulation of the PHO pathway; expression is independent of Pi concentration and Pho4p activity; contains 12 membrane-spanning segments; PHO87 has a paralog, PHO90, that arose from the whole genome duplication","termid":"PBO:0084385"}


id: GO:0015634
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of lipopolysaccharide from the inside of the cell to the outside of the cell across a membrane. A lipopolysaccharide is any of a group of related, structurally complex components of the outer membrane of Gram-negative bacteria. Lipopolysaccharides consist three covalently linked regions, lipid A, core oligosaccharide, and an O side chain. Lipid A is responsible for the toxicity of the lipopolysaccharide.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete lipopolysaccharide exporter activity (obsolete GO:0015634)","synonyms":[{"name":"LPS exporter activity","type":"exact"}],"termid":"GO:0015634"}


id: PBO:0054511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1911","termid":"PBO:0054511"}


id: PBO:0088950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Atg12 conjugating enzyme Atg10","termid":"PBO:0088950"}


id: GO:0099006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The entry of a symbiont into a host cell, following endocytosis, via permeabilization of the endosomal membrane by membrane penetration protein(s) of the symbiont. This process mediates the entry of some non-enveloped virus into eukaryotic cells. In some cases, viral membrane-penetration protein requires to be activated to display its membrane penetrating activity. Activation can be due to receptor binding or the acidic pH of the endosomal lumen.","definition_xrefs":["PMID:15329727","PMID:25055856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont entry into host cell via permeabilization of host membrane","termid":"GO:0140267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont entry into host cell via permeabilization of endosomal membrane","synonyms":[{"name":"viral entry via permeabilization of endosomal membrane","type":"narrow"}],"termid":"GO:0099006"}


id: PBO:0058625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6757","termid":"PBO:0058625"}


id: PR:O94631
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An rRNA methyltransferase 1, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1347.13c","secondary_identifiers":["UniProtKB:O94631"],"synonyms":[{"name":"21S rRNA (guanosine-2'-O)-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MRM1","type":"exact"},{"name":"mitochondrial large ribosomal RNA ribose methylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94631"}


id: PR:O14047
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase 26 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2C4.14c","secondary_identifiers":["UniProtKB:O14047"],"synonyms":[{"name":"Spom972h-STK26","type":"exact"}],"termid":"PR:O14047"}


id: PBO:0086958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of phospholipase D (Spo14p); interacts with Spo14p and regulates its catalytic activity; capable of buffering the toxicity of C16:0 platelet activating factor, a lipid that accumulates intraneuronally in Alzheimer's patients","termid":"PBO:0086958"}


id: GO:0031399
data:
  {"annotated_genes":["SJAG_01985"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033234"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the covalent alteration of one or more amino acid residues within a protein.","definition_xrefs":["GOC:tb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"regulates","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01985":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein modification process","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:0031399","terms_by_termid":{"GO:0033234":null}}


id: FYPO:0000185
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A DNA recombination phenotype observed in the vegetative growth phase of the life cycle in which gene conversion occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased DNA recombination during vegetative growth","termid":"FYPO:0002340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000293","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased gene conversion during vegetative growth","synonyms":[{"name":"DNA recombination defects, gene conversion, reduced","type":"exact"},{"name":"decreased gene conversion during mitotic cell cycle","type":"related"},{"name":"reduced gene conversion during vegetative growth","type":"exact"}],"termid":"FYPO:0000185"}


id: FYPO:0004360
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the duration of mitotic cell cycle arrest or delay due to regulation by the DNA replication checkpoint is shorter than normal. The DNA replication checkpoint normally prevents the initiation of mitosis until DNA replication is complete.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle DNA replication checkpoint","termid":"FYPO:0000173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased duration of mitotic cell cycle DNA replication checkpoint","synonyms":[{"name":"decreased duration of DNA replication checkpoint","type":"broad"},{"name":"decreased duration of mitotic cell cycle DNA replication checkpoint activation","type":"exact"},{"name":"reduced duration of mitotic cell cycle DNA replication checkpoint","type":"exact"}],"termid":"FYPO:0004360"}


id: PBO:0082526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell fusion regulator; cytoplasmic protein localized to shmoo tip; required for alignment of parental nuclei before nuclear fusion during mating; contains a Dbl-homology domain; binds specifically with activated Cdc42p","termid":"PBO:0082526"}


id: GO:0070437
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains Grb2 and the adaptor protein Shc, and is involved in linking epidermal growth factor receptor (EGFR) activation to the p21-Ras pathway.","definition_xrefs":["GOC:mah","PMID:7798267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"Grb2-Shc complex","synonyms":[{"name":"Grb2-Shc complex, EGF stimulated","type":"narrow"}],"termid":"GO:0070437"}


id: GO:0072261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of extraglomerular glomerular mesangium cells in the metanephros by cell division, resulting in the expansion of their population. Extraglomerular mesangial cells (also known as lacis cells, Goormaghtigh cells) are light-staining cells in the kidney found outside the glomerulus, near the vascular pole and macula densa.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extraglomerular mesangial cell proliferation","termid":"GO:0072122"},{"relation_name":"is_a","term_name":"cell proliferation involved in metanephros development","termid":"GO:0072203"},{"relation_name":"part_of","term_name":"metanephric nephron development","termid":"GO:0072210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric extraglomerular mesangial cell proliferation involved in metanephros development","synonyms":[{"name":"metanephric Goormaghtigh proliferation","type":"related"},{"name":"metanephric lacis cell proliferation","type":"related"}],"termid":"GO:0072261"}


id: PBO:0084444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Maltose permease; part of the complex locus MAL2","termid":"PBO:0084444"}


id: GO:0036240
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the plasma membrane and the cell wall, as found in organisms such as filamentous fungi.","definition_xrefs":["PMID:21564341","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"periplasmic space","termid":"GO:0042597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"septal periplasm","synonyms":[{"name":"cell wall-enclosed septal periplasm","type":"exact"}],"termid":"GO:0036240"}


id: PBO:0077921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPT1 pseudogene 12","termid":"PBO:0077921"}


id: GO:0090345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving organohalogen compounds, as carried out by individual cells.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolic process","termid":"GO:0044237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular organohalogen metabolic process","termid":"GO:0090345"}


id: GO:0006076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (1->3)-beta-D-glucans.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(1->3)-beta-D-glucan metabolic process","termid":"GO:0006074"},{"relation_name":"is_a","term_name":"beta-glucan catabolic process","termid":"GO:0051275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"(1->3)-beta-D-glucan catabolic process","synonyms":[{"name":"1,3-beta-D-glucan catabolic process","type":"exact"},{"name":"1,3-beta-glucan breakdown","type":"exact"},{"name":"1,3-beta-glucan catabolism","type":"exact"},{"name":"1,3-beta-glucan degradation","type":"exact"},{"name":"beta-1,3 glucan breakdown","type":"exact"},{"name":"beta-1,3 glucan catabolic process","type":"exact"},{"name":"beta-1,3 glucan catabolism","type":"exact"},{"name":"beta-1,3 glucan degradation","type":"exact"}],"termid":"GO:0006076"}


id: FYPO:0005813
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to one or both ends of a microtubule is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to microtubule cytoskeleton during mitotic interphase","termid":"FYPO:0003185"},{"relation_name":"is_a","term_name":"normal intracellular protein transport during vegetative growth","termid":"FYPO:0005397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to microtubule end during mitotic interphase","synonyms":[{"name":"normal protein localisation to microtubule end during mitotic interphase","type":"exact"},{"name":"normal protein localization to microtubule end during interphase during vegetative growth","type":"exact"},{"name":"normal protein localization to microtubule end during interphase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0005813"}


id: PBO:0030246
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_water_deprivation","termid":"PBO:0030246"}


id: PBO:0113433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Small gene in chromosome III recombination enhancer; activated during mating-type switching; bound by condensin complex, deletion drastically changes chromosome III structure, alters donor preference; promoter functions as locus control region (LCR) that regulates both transcription and long-range chromatin interactions","termid":"PBO:0113433"}


id: GO:0008441
data:
  {"annotated_genes":["SJAG_01702"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111610],"is_not":false,"summary":null,"term":"GO:0008441"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine 3',5'-bisphosphate + H2O = adenosine 5'-phosphate + phosphate.","definition_xrefs":["EC:3.1.3.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidase activity","termid":"GO:0008252"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01702":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3'(2'),5'-bisphosphate nucleotidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-176606","MetaCyc:325-BISPHOSPHATE-NUCLEOTIDASE-RXN","Reactome:R-HSA-8953499","RHEA:10040"],"synonyms":[{"name":"3'(2'),5' bisphosphate nucleotidase activity","type":"exact"},{"name":"3'(2'),5'-bisphosphonucleoside 3'(2')-phosphohydrolase activity","type":"related"},{"name":"3'-phosphoadenylylsulfate 3'-phosphatase activity","type":"related"},{"name":"DPNPase activity","type":"related"},{"name":"adenosine-3'(2'),5'-bisphosphate 3'(2')-phosphohydrolase activity","type":"related"},{"name":"phosphoadenylate 3'-nucleotidase activity","type":"related"}],"termid":"GO:0008441","terms_by_termid":{"GO:0008441":null}}


id: GO:0031604
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The subunits forming the outer ring of the core complex of a proteasome located in the nucleus of a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome core complex, alpha-subunit complex","termid":"GO:0019773"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear proteasome core complex","termid":"GO:0031601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"nuclear proteasome core complex, alpha-subunit complex","termid":"GO:0031604"}


id: PR:Q9UUC8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 39S ribosomal protein L43, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02962","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L51, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C2.12","secondary_identifiers":["UniProtKB:Q9UUC8"],"synonyms":[{"name":"Spom972h-MRPL43","type":"exact"}],"termid":"PR:Q9UUC8"}


id: GO:1901805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of beta-glucoside.","definition_xrefs":["GOC:TermGenie","PMID:15205427","Unipathway:UPA00237","PMID:16390337","GOC:yaf","PMID:8990303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside catabolic process","termid":"GO:0016139"},{"relation_name":"is_a","term_name":"beta-glucoside metabolic process","termid":"GO:1901804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"beta-glucoside catabolic process","synonyms":[{"name":"beta-glucoside breakdown","type":"exact"},{"name":"beta-glucoside catabolism","type":"exact"},{"name":"beta-glucoside degradation","type":"exact"}],"termid":"GO:1901805"}


id: PBO:0048357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 68","termid":"PBO:0048357"}


id: PBO:0051521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor type 2","termid":"PBO:0051521"}


id: GO:0003734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete small nuclear ribonucleoprotein (obsolete GO:0003734)","synonyms":[{"name":"small nuclear ribonucleoprotein","type":"exact"},{"name":"snRNP","type":"exact"}],"termid":"GO:0003734"}


id: PBO:0062270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily H member 1","termid":"PBO:0062270"}


id: PBO:0075548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPECC1 pseudogene 2","termid":"PBO:0075548"}


id: GO:0010514
data:
  {"annotated_genes":["SJAG_00256","SJAG_00472","SJAG_01699","SJAG_01254","SJAG_06638","SJAG_02785","SJAG_00975","SJAG_04206","SJAG_03486","SJAG_02472","SJAG_03735","SJAG_02444","SJAG_00781","SJAG_03802","SJAG_01718","SJAG_01113","SJAG_02592","SJAG_05153","SJAG_00526","SJAG_02723","SJAG_02066","SJAG_00600","SJAG_00210","SJAG_02730","SJAG_04813","SJAG_04026","SJAG_04312","SJAG_01084","SJAG_01311","SJAG_03501","SJAG_02773","SJAG_04009","SJAG_03346","SJAG_02266","SJAG_03081","SJAG_03067","SJAG_03309"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84099,85276,95558,102319,103100,104856,111653,112215,112558,114287,115145,115146],"is_not":false,"summary":null,"term":"GO:0010514"},{"annotations":[94484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031141"},{"annotations":[111652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031142"},{"annotations":[90288,102893,96597,88977,105066,97906,100555,101855,101949,112142,90427,87460,102539,84276,110531,111599,102695],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0010515"},{"annotations":[103102,104627,83925,104857,96554,99428,112349,95559,115149,115150,97441,100499],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1900237"}]},"cv_name":"biological_process","definition":"The process in which a cell initiates conjugation with cellular fusion. Conjugation with cellular fusion is the process that results in the union of cellular and genetic information from compatible mating types.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of conjugation with cellular fusion","termid":"GO:0031139"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00210":null,"SJAG_00256":null,"SJAG_00472":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00781":null,"SJAG_00975":null,"SJAG_01084":null,"SJAG_01113":null,"SJAG_01254":null,"SJAG_01311":null,"SJAG_01699":null,"SJAG_01718":null,"SJAG_02066":null,"SJAG_02266":null,"SJAG_02444":null,"SJAG_02472":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02730":null,"SJAG_02773":null,"SJAG_02785":null,"SJAG_03067":null,"SJAG_03081":null,"SJAG_03309":null,"SJAG_03346":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03735":null,"SJAG_03802":null,"SJAG_04009":null,"SJAG_04026":null,"SJAG_04206":null,"SJAG_04312":null,"SJAG_04813":null,"SJAG_05153":null,"SJAG_06638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"positively_regulates","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0000747"],"is_obsolete":false,"name":"induction of conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010514","terms_by_termid":{"GO:0010514":null,"GO:0010515":null,"GO:0031141":null,"GO:0031142":null,"GO:1900237":null}}


id: GO:0036489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of neuromelanin. Neuromelanin is a polymer of 5,6-dihydroxyindole monomers.","definition_xrefs":["GOC:PARL","Wiki:Neuromelanin","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromelanin biosynthetic process","synonyms":[{"name":"neuromelanin anabolism","type":"exact"},{"name":"neuromelanin biosynthesis","type":"exact"},{"name":"neuromelanin formation","type":"exact"},{"name":"neuromelanin synthesis","type":"exact"}],"termid":"GO:0036489"}


id: PR:O14276
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fyv7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA-processing protein fyv7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.07","synonyms":[{"name":"Spom972h-fyv7","type":"exact"}],"termid":"PR:O14276"}


id: PBO:0033782
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_site-specific_DNA_replication_termination_at_RTS1_barrier","termid":"PBO:0033782"}


id: GO:2000906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of starch metabolic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of starch metabolic process","termid":"GO:2000904"},{"relation_name":"positively_regulates","term_name":"starch metabolic process","termid":"GO:0005982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of starch metabolic process","synonyms":[{"name":"positive regulation of starch metabolism","type":"exact"}],"termid":"GO:2000906"}


id: PBO:0090468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [2Fe-2S] cluster assembly and protein import chaperone Mge1","termid":"PBO:0090468"}


id: PBO:0042541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 8","termid":"PBO:0042541"}


id: PR:Q10335
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S proteasome non-ATPase regulatory subunit 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02451","PRO:DNx","PANTHER:PTHR14145:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory subunit rpn7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC582.07c","secondary_identifiers":["UniProtKB:Q10335"],"synonyms":[{"name":"Spom972h-PSMD6","type":"exact"}],"termid":"PR:Q10335"}


id: GO:0019824
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A subform of peroxisome that corresponds to an intermediate in a peroxisome assembly pathway, which operates by conversion of peroxisomal subforms in the direction P1, P2 -> P3 -> P4 -> P5 -> P6. P6 peroxisomes are distinguished from the other subforms on the bases of buoyant density and protein content, and are equivalent to mature peroxisomes.","definition_xrefs":["PMID:10629216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005777"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005777"],"is_obsolete":false,"name":"P6 peroxisome","synonyms":[{"name":"peroxisome vesicle","type":"broad"}],"termid":"GO:0019824"}


id: GO:0003792
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of actin thin filament length activity (obsolete GO:0003792)","synonyms":[{"name":"regulation of actin thin filament length activity","type":"exact"}],"termid":"GO:0003792"}


id: PBO:0053538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 540","termid":"PBO:0053538"}


id: GO:0110093
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The area of a motile nucleus furthest from the direction of movement.","definition_xrefs":["GOC:kmv","PMID:24335254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nucleus lagging edge","termid":"GO:0110093"}


id: PBO:0080597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 27","termid":"PBO:0080597"}


id: GO:0045589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of differentiation of regulatory T cells.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell differentiation","termid":"GO:0045580"},{"relation_name":"regulates","term_name":"regulatory T cell differentiation","termid":"GO:0045066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of regulatory T cell differentiation","synonyms":[{"name":"regulation of regulatory T cell development","type":"related"},{"name":"regulation of regulatory T lymphocyte differentiation","type":"exact"},{"name":"regulation of regulatory T-cell differentiation","type":"exact"},{"name":"regulation of regulatory T-lymphocyte differentiation","type":"exact"},{"name":"regulation of suppressor T cell differentiation","type":"exact"},{"name":"regulation of suppressor T lymphocyte differentiation","type":"exact"},{"name":"regulation of suppressor T-cell differentiation","type":"exact"},{"name":"regulation of suppressor T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0045589"}


id: GO:1903386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of homophilic cell adhesion.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:als","PMID:21724833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-cell adhesion","termid":"GO:0022408"},{"relation_name":"is_a","term_name":"regulation of homophilic cell adhesion","termid":"GO:1903385"},{"relation_name":"negatively_regulates","term_name":"homophilic cell adhesion via plasma membrane adhesion molecules","termid":"GO:0007156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of homophilic cell adhesion","synonyms":[{"name":"down regulation of homophilic cell adhesion","type":"exact"},{"name":"down-regulation of homophilic cell adhesion","type":"exact"},{"name":"downregulation of homophilic cell adhesion","type":"exact"},{"name":"inhibition of homophilic cell adhesion","type":"narrow"}],"termid":"GO:1903386"}


id: MOD:00017
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to a glycine.","definition_xrefs":["RESID:AA0008","PubMed:6692818","DeltaMass:0","PubMed:1310545","ChEBI:29947"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine residue","synonyms":[{"name":"Gly","type":"exact"},{"name":"aminoacetic acid","type":"exact"},{"name":"aminoethanoic acid","type":"exact"},{"name":"azanylethanoic acid","type":"exact"},{"name":"glycine","type":"exact"},{"name":"glycocoll","type":"exact"}],"termid":"MOD:00017"}


id: GO:0075214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The physiological, developmental and morphological changes that occur in a symbiont spore during the process of its encystment. Encystment means to enter a state of essentially suspended animation in which the spore is protected by an outer coating and remains immobile and inactive until favorable conditions for growth occur again. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"},{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spore encystment","synonyms":[{"name":"spore encystment on host","type":"related"}],"termid":"GO:0075214"}


id: GO:0052778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving diacetylchitobiose, the N,N'-diacetylated derivative of chitobiose.","definition_xrefs":["PMID:22797760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino disaccharide metabolic process","termid":"GO:0052779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"diacetylchitobiose metabolic process","synonyms":[{"name":"diacetylchitobiose metabolism","type":"exact"}],"termid":"GO:0052778"}


id: PBO:0050264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 42","termid":"PBO:0050264"}


id: PBO:0041872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cas scaffold protein family member 4","termid":"PBO:0041872"}


id: GO:1903057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of melanosome organization.","definition_xrefs":["GOC:TermGenie","PMID:24769727","GO_REF:0000058","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"regulation of melanosome organization","termid":"GO:1903056"},{"relation_name":"negatively_regulates","term_name":"melanosome organization","termid":"GO:0032438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of melanosome organization","synonyms":[{"name":"down regulation of melanosome organisation","type":"exact"},{"name":"down regulation of melanosome organization","type":"exact"},{"name":"down regulation of melanosome organization and biogenesis","type":"related"},{"name":"down-regulation of melanosome organisation","type":"exact"},{"name":"down-regulation of melanosome organization","type":"exact"},{"name":"down-regulation of melanosome organization and biogenesis","type":"related"},{"name":"downregulation of melanosome organisation","type":"exact"},{"name":"downregulation of melanosome organization","type":"exact"},{"name":"downregulation of melanosome organization and biogenesis","type":"related"},{"name":"inhibition of melanosome organisation","type":"narrow"},{"name":"inhibition of melanosome organization","type":"narrow"},{"name":"inhibition of melanosome organization and biogenesis","type":"related"},{"name":"negative regulation of melanosome organisation","type":"exact"},{"name":"negative regulation of melanosome organization and biogenesis","type":"related"}],"termid":"GO:1903057"}


id: GO:0008670
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: a 4,5-saturated-(2E)-enoyl-CoA + NADP+ = a (2E,4E)-dienoyl-CoA + H+ + NADPH, and a (2E,4Z)-dienoyl-CoA + H+ + NADPH = a 4,5-saturated-(2E)-enoyl-CoA + NADP+.","definition_xrefs":["EC:1.3.1.34"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"2,4-dienoyl-CoA reductase (NADPH) activity","synonyms":[{"name":"4-enoyl coenzyme A (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"related"},{"name":"4-enoyl-CoA reductase (NADPH) activity","type":"related"},{"name":"4-enoyl-CoA reductase (NADPH2)","type":"related"},{"name":"4-enoyl-CoA reductase activity","type":"related"},{"name":"trans-2,3-didehydroacyl-CoA:NADP+ 4-oxidoreductase activity","type":"related"}],"termid":"GO:0008670"}


id: GO:0050086
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannitol + NAD+ = D-fructose + NADH.","definition_xrefs":["MetaCyc:MANNITOL-2-DEHYDROGENASE-RXN","EC:1.1.1.67"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"mannitol 2-dehydrogenase activity","secondary_identifiers":["RHEA:12084"],"synonyms":[{"name":"D-mannitol dehydrogenase activity","type":"related"},{"name":"D-mannitol:NAD+ 2-oxidoreductase activity","type":"related"}],"termid":"GO:0050086"}


id: GO:0018171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The oxidation of peptidyl-cysteine to peptidyl-L-cysteine sulfinic acid or peptidyl-L-cysteine sulfenic acid.","definition_xrefs":["RESID:AA0262","PMID:9586994","RESID:AA0205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein oxidation","termid":"GO:0018158"},{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-cysteine oxidation","termid":"GO:0018171"}


id: PBO:0054775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2188","termid":"PBO:0054775"}


id: PBO:0002276
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.2.14","termid":"PBO:0002276"}


id: GO:0044804
data:
  {"annotated_genes":["SJAG_00115","SJAG_02100","SJAG_04232","SJAG_03851","SJAG_03718","SJAG_00645","SJAG_01722","SJAG_01561","SJAG_04991","SJAG_01274","SJAG_03100","SJAG_06309","SJAG_00355","SJAG_05289","SJAG_04502","SJAG_04655","SJAG_01283","SJAG_04963","SJAG_01783","SJAG_01382","SJAG_05017","SJAG_01135"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93669,94669,95459,96347,104615,105823],"is_not":false,"summary":null,"term":"GO:0044804"},{"annotations":[100878,99655,95760,87669,83907,96042,104259,93939,89981,112294,86148,71642,113884,104706,90306,107754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034727"}]},"cv_name":"biological_process","definition":"A form of autophagy, by which damaged or non-essential parts of the nucleus, or even an entire nucleus is degraded.","definition_xrefs":["PMID:24013549","GOC:autophagy","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00115":null,"SJAG_00355":null,"SJAG_00645":null,"SJAG_01135":null,"SJAG_01274":null,"SJAG_01283":null,"SJAG_01382":null,"SJAG_01561":null,"SJAG_01722":null,"SJAG_01783":null,"SJAG_02100":null,"SJAG_03100":null,"SJAG_03718":null,"SJAG_03851":null,"SJAG_04232":null,"SJAG_04502":null,"SJAG_04655":null,"SJAG_04963":null,"SJAG_04991":null,"SJAG_05017":null,"SJAG_05289":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006914"],"is_obsolete":false,"name":"nucleophagy","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"autophagy of nucleus","type":"exact"},{"name":"late nucleophagy","type":"narrow"},{"name":"nucleus degradation","type":"related"}],"termid":"GO:0044804","terms_by_termid":{"GO:0034727":null,"GO:0044804":null}}


id: PBO:0041031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic charge Y-linked 2","termid":"PBO:0041031"}


id: PBO:0059509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded conserved sequence block II","termid":"PBO:0059509"}


id: PBO:0083212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified ORF URA7; identified by expression profiling and mass spectrometry","termid":"PBO:0083212"}


id: PBO:0051896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha 5","termid":"PBO:0051896"}


id: _global:has_target_start_location
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"This relationship holds between p and l when p is a transport or localization process in which the outcome is to move some cargo c from some initial location l to some destination.","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"results_in_transport_to_from_or_in","termid":"_global:results_in_transport_to_from_or_in"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_target_start_location","secondary_identifiers":["RO:0002338"],"termid":"_global:has_target_start_location"}


id: PBO:0055456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2888","termid":"PBO:0055456"}


id: GO:0035748
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of the myelin sheath furthest from the axon.","definition_xrefs":["GOC:BHF","PMID:20237282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"myelin sheath","termid":"GO:0043209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"myelin sheath abaxonal region","termid":"GO:0035748"}


id: GO:1904947
data:
  {"annotated_genes":["SJAG_03503"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103614],"is_not":false,"summary":null,"term":"GO:1904947"}]},"cv_name":"biological_process","definition":"The process in which folic acid is transported from the cytosol into the mitochondrial matrix.","definition_xrefs":["GO_REF:0000075","PMID:15140890","GOC:rph","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folate transmembrane transport","termid":"GO:0098838"},{"relation_name":"is_a","term_name":"import into the mitochondrion","termid":"GO:0170036"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03503":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"folate import into mitochondrion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"folic acid import into mitochondrion","type":"related"}],"termid":"GO:1904947","terms_by_termid":{"GO:1904947":null}}


id: PBO:0001841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylserine decarboxylase Psd3","termid":"PBO:0001841"}


id: GO:1905878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The disaggregation of an invadopodium into its constituent components.","definition_xrefs":["GO_REF:0000079","GOC:TermGenie","PMID:15684033"],"gene_count":0,"genotype_count":0,"name":"obsolete invadopodium disassembly (obsolete GO:1905878)","termid":"GO:1905878"}


id: PBO:0078056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 46","termid":"PBO:0078056"}


id: _global:gene_product_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"definition \\\"x has gene product of y if and only if y is a gene (SO:0000704) that participates in some gene expression process (GO:0010467) where the output of that process is either y or something that is ribosomally translated from x\\\"","direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_related_to","termid":"_global:genomically_related_to"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_product_of","secondary_identifiers":["GOREL:0001028","RO:0002204"],"termid":"_global:gene_product_of"}


id: PBO:0063018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAXIP1 associated glutamate rich protein 1","termid":"PBO:0063018"}


id: GO:1901988
data:
  {"annotated_genes":["SJAG_01082","SJAG_02771","SJAG_00082","SJAG_02169","SJAG_03026","SJAG_00364","SJAG_01708","SJAG_02858","SJAG_00991","SJAG_04943","SJAG_03160","SJAG_03067","SJAG_04671","SJAG_02026","SJAG_01297","SJAG_04259","SJAG_03898","SJAG_03695","SJAG_02266","SJAG_03602","SJAG_01605","SJAG_00640","SJAG_04394","SJAG_04332","SJAG_03854","SJAG_02074","SJAG_02563","SJAG_04486","SJAG_01044","SJAG_02592","SJAG_02451","SJAG_03126","SJAG_01076","SJAG_02332","SJAG_04999","SJAG_03927","SJAG_00623","SJAG_01855","SJAG_01118","SJAG_03720","SJAG_00486","SJAG_00327","SJAG_00996","SJAG_01873","SJAG_04140","SJAG_01084","SJAG_01010","SJAG_01677","SJAG_03048","SJAG_02392","SJAG_00071","SJAG_06592","SJAG_04126","SJAG_00600","SJAG_01429","SJAG_01210","SJAG_05373","SJAG_01205","SJAG_04287","SJAG_01679","SJAG_04280","SJAG_03073","SJAG_04699","SJAG_04884","SJAG_00318","SJAG_01837","SJAG_02336","SJAG_00883","SJAG_01330","SJAG_01680","SJAG_03681","SJAG_03942","SJAG_02098","SJAG_01146","SJAG_04597","SJAG_03591","SJAG_02723","SJAG_01515","SJAG_03353","SJAG_03327","SJAG_01401","SJAG_02576","SJAG_00169","SJAG_03529","SJAG_00429","SJAG_05346","SJAG_00526","SJAG_03438"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103284,86782,108019,95647,99958,110333,104306,109845,111967],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[105363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000077"},{"annotations":[110559,102362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[88575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044778"},{"annotations":[87480,112129,102657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033315"},{"annotations":[76824,110322,112130,85124,102658],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051598"},{"annotations":[97854,102363,112745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[95057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007093"},{"annotations":[97491,96594,112072,86060,90466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044878"},{"annotations":[113778,95249,110323,112305,89617,112073,87841,78793,102659,89999,107257,105364,110529,98420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044773"},{"annotations":[90022,85185,95416,105365,112880,102660,108093,112131,87481,103889,113346,113175,99383,90000,95250,88576,96595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033314"},{"annotations":[97677,104939,111969,85009,98421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031568"},{"annotations":[87359,105722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"},{"annotations":[112074,91910,94493,90598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031569"},{"annotations":[84615,95417,97109,87842,105366,110324,113779,102661,90002,86274,87482,96596,107790,113092,85186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"},{"annotations":[84616,95418,112132,92073,90599,88577,95251,112133,96913,103721,85187,85232,97579,98422,102662,87483,113176,107791,108095,86502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031573"},{"annotations":[110562,86784,95493,109849,111623,112748,97855,102364,105959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[98428,88892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001100"},{"annotations":[88205,89379,85010,87788,94933,104940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000134"},{"annotations":[91912,110325,97053,88976,108539,103064,107494,86061,102694,90426,107883,100554,89262,89618,107624,112075,110530,104624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010972"},{"annotations":[107625,112076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110031"},{"annotations":[94755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902103"},{"annotations":[102365,111624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045841"},{"annotations":[90259],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[109850],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[112752],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[97391],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"},{"annotations":[90260],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090266"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell cycle phase transition.","definition_xrefs":["GOC:TermGenie","PMID:22841721","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of cell cycle phase transition","termid":"GO:1901987"},{"relation_name":"negatively_regulates","term_name":"cell cycle phase 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regulation of cell cycle phase transition","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of cell cycle phase transition","type":"exact"},{"name":"down regulation of cell cycle transition","type":"exact"},{"name":"down-regulation of cell cycle phase transition","type":"exact"},{"name":"down-regulation of cell cycle transition","type":"exact"},{"name":"downregulation of cell cycle phase transition","type":"exact"},{"name":"downregulation of cell cycle transition","type":"exact"},{"name":"inhibition of cell cycle phase transition","type":"narrow"},{"name":"inhibition of cell cycle transition","type":"exact"},{"name":"negative regulation of cell cycle 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id: PBO:0079705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquilin 1","termid":"PBO:0079705"}


id: PBO:0084821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function involved in lipid homeostasis; integral membrane protein that localizes to the mitochondrial outer membrane; involved in mitochondrial morphology; interacts genetically with MDM10, and other members of the ERMES complex; contains five predicted transmembrane domains","termid":"PBO:0084821"}


id: PBO:0043391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytidine monophospho-N-acetylneuraminic acid hydroxylase, pseudogene","termid":"PBO:0043391"}


id: PBO:0070189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 107 pseudogene","termid":"PBO:0070189"}


id: PBO:0029356
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_Ssb1_foci","termid":"PBO:0029356"}


id: GO:0031872
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 proteinase activated receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteinase activated receptor binding","termid":"GO:0031871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"type 1 proteinase activated receptor binding","synonyms":[{"name":"thrombin receptor binding","type":"exact"},{"name":"type 1 proteinase activated receptor ligand","type":"narrow"}],"termid":"GO:0031872"}


id: PBO:0065059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl endopeptidase","termid":"PBO:0065059"}


id: PBO:0001064
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.61","termid":"PBO:0001064"}


id: PBO:0042759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 41","termid":"PBO:0042759"}


id: PBO:0059722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 30","termid":"PBO:0059722"}


id: PBO:0029163
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation","termid":"PBO:0029163"}


id: PR:Q9UTS5-2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A zinc finger protein zas1 (Schizosaccharomyces pombe 972h-) that is a translation product of some mRNA giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9UTS5-2.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTS5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc finger protein zas1 (Schizosaccharomyces pombe 972h-)","termid":"PR:Q9UTS5"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein zas1 isoform 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.01","secondary_identifiers":["UniProtKB:Q9UTS5-2"],"synonyms":[{"name":"Spom972h-zas1/iso:2","type":"exact"},{"name":"zinc finger protein zas1 isoform zas1A (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTS5-2"}


id: GO:0097174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 1,6-anhydro-N-acetyl-beta-muramic acid, the 1,6-anhydro-derivative of N-acetyl-beta-muramic acid.","definition_xrefs":["PMID:15901686","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"1,6-anhydro-N-acetyl-beta-muramic acid metabolic process","synonyms":[{"name":"1,6-anhydro-N-acetyl-beta-muramate metabolic process","type":"exact"},{"name":"1,6-anhydro-N-acetyl-beta-muramate metabolism","type":"exact"},{"name":"1,6-anhydro-N-acetyl-beta-muramic acid metabolism","type":"exact"},{"name":"1,6-anhydro-N-acetylmuramic acid metabolic process","type":"exact"},{"name":"1,6-anhydro-N-acetylmuramic acid metabolism","type":"exact"}],"termid":"GO:0097174"}


id: PBO:0043468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 7","termid":"PBO:0043468"}


id: PBO:0055025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2440","termid":"PBO:0055025"}


id: PBO:0062437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 101 pseudogene","termid":"PBO:0062437"}


id: GO:0044637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the negative regulation of complement activation via the classical pathway of the bitten/stung organism.","definition_xrefs":["GOC:fj","PMID:20837040","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in negative regulation of complement activation, classical pathway in another organism (obsolete GO:0044637)","synonyms":[{"name":"envenomation resulting in negative regulation of complement activation, classical pathway in other organism","type":"exact"}],"termid":"GO:0044637"}


id: PBO:0069687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 966, pseudogene","termid":"PBO:0069687"}


id: GO:0061105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the differentiation of a neuroendocrine cell in the stomach.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"is_a","term_name":"regulation of neuron differentiation","termid":"GO:0045664"},{"relation_name":"regulates","term_name":"stomach neuroendocrine cell differentiation","termid":"GO:0061102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of stomach neuroendocrine cell differentiation","termid":"GO:0061105"}


id: PBO:0073994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 3 pseudogene 1","termid":"PBO:0073994"}


id: PBO:0070517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 16","termid":"PBO:0070517"}


id: GO:0044318
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-aspartate + fumarate = alpha-iminosuccinate + succinate.","definition_xrefs":["PMID:20149100"],"gene_count":0,"genotype_count":0,"name":"obsolete L-aspartate:fumarate oxidoreductase activity (obsolete GO:0044318)","termid":"GO:0044318"}


id: FYPO:0005970
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing magnesium chloride.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0000257","FYPO:0002060","FYPO:0002058","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on magnesium chloride","synonyms":[{"name":"normal cell population growth in presence of magnesium chloride","type":"exact"},{"name":"normal cell population growth on MgCl2","type":"exact"},{"name":"normal cell population growth on magnesium chloride","type":"exact"},{"name":"normal cellular response to magnesium chloride","type":"related"},{"name":"normal growth on magnesium dichloride","type":"exact"},{"name":"normal vegetative cell population growth on magnesium chloride","type":"exact"}],"termid":"FYPO:0005970"}


id: GO:0032324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the molybdopterin cofactor (Moco), essential for the catalytic activity of some enzymes, e.g. sulfite oxidase, xanthine dehydrogenase, and aldehyde oxidase. The cofactor consists of a mononuclear molybdenum (Mo-molybdopterin) or tungsten ion (W-molybdopterin) coordinated by one or two molybdopterin ligands.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdopterin cofactor metabolic process","termid":"GO:0043545"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"molybdopterin cofactor biosynthetic process","secondary_identifiers":["MetaCyc:Molybdenum-Cofactor-Biosynthesis"],"synonyms":[{"name":"molybdopterin cofactor anabolism","type":"exact"},{"name":"molybdopterin cofactor biosynthesis","type":"related"},{"name":"molybdopterin cofactor formation","type":"related"},{"name":"molybdopterin cofactor synthesis","type":"exact"}],"termid":"GO:0032324"}


id: PBO:0053114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipocalin 1 pseudogene 1","termid":"PBO:0053114"}


id: PBO:0065527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTCHD1 antisense RNA (head to head)","termid":"PBO:0065527"}


id: GO:0043922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a host organism stops, prevents, or reduces the frequency, rate or extent of viral transcription.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by host of symbiont process","termid":"GO:0051851"},{"relation_name":"negatively_regulates","term_name":"viral transcription","termid":"GO:0019083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation by host of viral transcription","synonyms":[{"name":"negative regulation of viral transcription by host","type":"exact"}],"termid":"GO:0043922"}


id: GO:0006222
data:
  {"annotated_genes":["SJAG_04709","SJAG_04713","SJAG_00444","SJAG_04354","SJAG_00694","SJAG_00533","SJAG_00197","SJAG_03708","SJAG_00964","SJAG_03164"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112796,85518,107975,89469,94560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[84521,89019,83541,88017,110979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of UMP, uridine monophosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside monophosphate biosynthetic process","termid":"GO:0009174"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide biosynthetic process","termid":"GO:0009220"},{"relation_name":"is_a","term_name":"UMP metabolic process","termid":"GO:0046049"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00444":null,"SJAG_00533":null,"SJAG_00694":null,"SJAG_00964":null,"SJAG_03164":null,"SJAG_03708":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_04713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"UMP biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"UMP anabolism","type":"exact"},{"name":"UMP biosynthesis","type":"exact"},{"name":"UMP formation","type":"exact"},{"name":"UMP synthesis","type":"exact"}],"termid":"GO:0006222","terms_by_termid":{"GO:0044205":null,"GO:0044206":null}}


id: PBO:0087103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal protein 51 (rp51) of the small (40s) subunit; homologous to mammalian ribosomal protein S17, no bacterial homolog; RPS17B has a paralog, RPS17A, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0087103"}


id: GO:0004369
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sn-glycerol 3-phosphate + O2 = glycerone phosphate + H2O2.","definition_xrefs":["EC:1.1.3.21","RHEA:18369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"glycerol-3-phosphate oxidase activity","secondary_identifiers":["KEGG_REACTION:R00846","MetaCyc:GLYCEROL-3-PHOSPHATE-OXIDASE-RXN"],"synonyms":[{"name":"L-alpha-glycerol-3-phosphate oxidase activity","type":"related"},{"name":"L-alpha-glycerophosphate oxidase activity","type":"related"},{"name":"alpha-glycerophosphate oxidase activity","type":"related"},{"name":"glycerol phosphate oxidase activity","type":"related"},{"name":"glycerol-1-phosphate oxidase activity","type":"related"},{"name":"sn-glycerol-3-phosphate:oxygen 2-oxidoreductase activity","type":"related"}],"termid":"GO:0004369"}


id: SO:0001453
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A negatively charged, hydorophilic amino acid encoded by the codons GAT and GAC.","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartic_acid","synonyms":[{"name":"Asp","type":"exact"},{"name":"D","type":"exact"},{"name":"aspartic acid","type":"exact"}],"termid":"SO:0001453"}


id: PBO:0043560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type V alpha 2 chain","termid":"PBO:0043560"}


id: GO:0035232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a germ cell from their site of production to the gonad, through the attraction of cells towards their target.","definition_xrefs":["PMID:12885551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive chemotaxis","termid":"GO:0050918"},{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"},{"relation_name":"part_of","term_name":"germ cell migration","termid":"GO:0008354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ cell attraction","termid":"GO:0035232"}


id: PR:Q9P6N7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A threonine aspartase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01085","PANTHER:PTHR10188:SF8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine aspartase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.09c","secondary_identifiers":["UniProtKB:Q9P6N7"],"synonyms":[{"name":"Spom972h-TASP1","type":"exact"},{"name":"taspase-1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6N7"}


id: SO:0001770
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that does not affect the function of the gene or cause disease.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_phenotype","termid":"SO:0001769"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign_variant","synonyms":[{"name":"benign variant","type":"exact"}],"termid":"SO:0001770"}


id: GO:0033882
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: choloyl-CoA + H2O = cholate + CoA.","definition_xrefs":["EC:3.1.2.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA hydrolase activity","termid":"GO:0016289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"choloyl-CoA hydrolase activity","secondary_identifiers":["RHEA:14541","MetaCyc:3.1.2.27-RXN"],"synonyms":[{"name":"PTE-2","type":"related"},{"name":"chenodeoxycholoyl-coenzyme A thioesterase activity","type":"related"},{"name":"choloyl-coenzyme A thioesterase activity","type":"related"},{"name":"peroxisomal acyl-CoA thioesterase 2 activity","type":"narrow"}],"termid":"GO:0033882"}


id: GO:0014022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the neural plate is shaped by the intrinsic movement of the epidermal and neural plate regions.","definition_xrefs":["ISBN:0878932585","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelial sheet","termid":"GO:0002011"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"neural plate morphogenesis","termid":"GO:0001839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural plate elongation","termid":"GO:0014022"}


id: PR:P01129
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P01129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"start control protein cdc10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.12c","synonyms":[{"name":"Spom972h-cdc10","type":"exact"}],"termid":"PR:P01129"}


id: GO:0004497
data:
  {"annotated_genes":["SJAG_03018","SJAG_04913","SJAG_00370","SJAG_02285","SJAG_03750","SJAG_00459","SJAG_04000","SJAG_04608","SJAG_04032"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008682"},{"annotations":[99302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106364"},{"annotations":[94909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000254"},{"annotations":[92140],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019135"},{"annotations":[87856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080132"},{"annotations":[109078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004499"},{"annotations":[90175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031172"},{"annotations":[99304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016712"},{"annotations":[107871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004506"},{"annotations":[84546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008398"}]},"cv_name":"molecular_function","definition":"Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00370":null,"SJAG_00459":null,"SJAG_02285":null,"SJAG_03018":null,"SJAG_03750":null,"SJAG_04000":null,"SJAG_04032":null,"SJAG_04608":null,"SJAG_04913":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"monooxygenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-211910","Reactome:R-HSA-9027044","Reactome:R-HSA-5602242","Reactome:R-HSA-5602272","Reactome:R-HSA-9749986","Reactome:R-HSA-211960","Reactome:R-HSA-76416","Reactome:R-HSA-211968","Reactome:R-HSA-5602295","Reactome:R-HSA-5663050","Reactome:R-HSA-76426","Reactome:R-HSA-76354","Reactome:R-HSA-9027321","Reactome:R-HSA-5423672","Reactome:R-HSA-9756169","Reactome:R-HSA-2162191","Reactome:R-HSA-156526","Reactome:R-HSA-2161899","Reactome:R-HSA-5423664","Reactome:R-HSA-9756138","Reactome:R-HSA-211904","Reactome:R-HSA-211988","Reactome:R-HSA-2161814","Reactome:R-HSA-76475","Reactome:R-HSA-9027302","Reactome:R-HSA-5662662","Reactome:R-HSA-76472","Reactome:R-HSA-211924","Reactome:R-HSA-9750016","Reactome:R-HSA-76397","Reactome:R-HSA-212005","Reactome:R-HSA-215526","Reactome:R-HSA-76466","Reactome:R-HSA-217258","Reactome:R-HSA-211991","Reactome:R-HSA-9756180","Reactome:R-HSA-9027042","Reactome:R-HSA-143468","Reactome:R-HSA-213175","Reactome:R-HSA-9037761","Reactome:R-HSA-9756162","Reactome:R-HSA-211929","Reactome:R-HSA-9018874","Reactome:R-HSA-211882","Reactome:R-HSA-76386","Reactome:R-HSA-212004","Reactome:R-HSA-5605147","Reactome:R-HSA-5423647","Reactome:R-HSA-5423678","Reactome:R-HSA-211948","Reactome:R-HSA-2161940","Reactome:R-HSA-76373","Reactome:R-HSA-5662692","Reactome:R-HSA-76456","Reactome:R-HSA-211962","Reactome:R-HSA-9027043","Reactome:R-HSA-2161890","Reactome:R-HSA-8865107","Reactome:R-HSA-9753285","Reactome:R-HSA-211959","Reactome:R-HSA-211919","Reactome:R-HSA-76434","Reactome:R-HSA-2161795"],"synonyms":[{"name":"hydroxylase activity","type":"related"}],"termid":"GO:0004497","terms_by_termid":{"GO:0000254":null,"GO:0004499":null,"GO:0004506":null,"GO:0008398":null,"GO:0008682":null,"GO:0016712":null,"GO:0019135":null,"GO:0031172":null,"GO:0080132":null,"GO:0106364":null}}


id: GO:0098776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of proteins across the cell outer membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transmembrane transport","termid":"GO:0071806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein transport across the cell outer membrane","termid":"GO:0098776"}


id: GO:0098734
data:
  {"annotated_genes":["SJAG_00774","SJAG_02056","SJAG_02268"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57198,60756,60757,68701],"is_not":false,"summary":null,"term":"GO:0098734"}]},"cv_name":"biological_process","definition":"The removal of palymitoyl groups from a macromolecule.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule deacylation","termid":"GO:0098732"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00774":null,"SJAG_02056":null,"SJAG_02268":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macromolecule depalmitoylation","references_by_uniquename":{"GO_REF:0000108":null},"termid":"GO:0098734","terms_by_termid":{"GO:0098734":null}}


id: GO:0006610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a ribosomal protein from the cytoplasm into the nucleus, across the nuclear membrane. At least some ribosomal proteins, including rpl12, uses the importin 11 pathway as a major route into the nucleus.","definition_xrefs":["PMID:11809816","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein import into nucleus","termid":"GO:0006606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0006913","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"ribosomal protein import into nucleus","synonyms":[{"name":"ribosomal protein import into cell nucleus","type":"exact"},{"name":"ribosomal protein transport from cytoplasm to nucleus","type":"exact"},{"name":"ribosomal protein-nucleus import","type":"exact"}],"termid":"GO:0006610"}


id: GO:1901122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving bacitracin A.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00179","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bacitracin A metabolic process","synonyms":[{"name":"bacitracin A metabolism","type":"exact"}],"termid":"GO:1901122"}


id: PBO:0059021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 10","termid":"PBO:0059021"}


id: GO:1901578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of alkane biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"negatively_regulates","term_name":"alkane biosynthetic process","termid":"GO:0043447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of alkane biosynthetic process","synonyms":[{"name":"down regulation of alkane anabolism","type":"exact"},{"name":"down regulation of alkane biosynthesis","type":"exact"},{"name":"down regulation of alkane biosynthetic process","type":"exact"},{"name":"down regulation of alkane formation","type":"exact"},{"name":"down regulation of alkane synthesis","type":"exact"},{"name":"down-regulation of alkane anabolism","type":"exact"},{"name":"down-regulation of alkane biosynthesis","type":"exact"},{"name":"down-regulation of alkane biosynthetic process","type":"exact"},{"name":"down-regulation of alkane formation","type":"exact"},{"name":"down-regulation of alkane synthesis","type":"exact"},{"name":"downregulation of alkane anabolism","type":"exact"},{"name":"downregulation of alkane biosynthesis","type":"exact"},{"name":"downregulation of alkane biosynthetic process","type":"exact"},{"name":"downregulation of alkane formation","type":"exact"},{"name":"downregulation of alkane synthesis","type":"exact"},{"name":"inhibition of alkane anabolism","type":"exact"},{"name":"inhibition of alkane biosynthesis","type":"exact"},{"name":"inhibition of alkane biosynthetic process","type":"narrow"},{"name":"inhibition of alkane formation","type":"exact"},{"name":"inhibition of alkane synthesis","type":"exact"},{"name":"negative regulation of alkane anabolism","type":"exact"},{"name":"negative regulation of alkane biosynthesis","type":"exact"},{"name":"negative regulation of alkane formation","type":"exact"},{"name":"negative regulation of alkane synthesis","type":"exact"}],"termid":"GO:1901578"}


id: PBO:0084647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Microtubule polymerase of the XMAP215/Dis1 family; required for elongation of mitotic spindle during anaphase, as well as for spindle orientation and metaphase chromosome alignment; stabilizes or destabilizes kinetochore-microtubule attachment depending on kinetochore tension; interacts with spindle pole body component Spc72p; metazoan ch-TOG/XMAP215 family member","termid":"PBO:0084647"}


id: FYPO:0005328
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the repair of cyclobutane pyrimidine dimers by error-free translesion synthesis is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:20453833","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal error-free translesion synthesis","termid":"FYPO:0005325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal error-free translesion synthesis of cyclobutane pyrimidine dimers","synonyms":[{"name":"normal error-free translesion synthesis across TT-CPD","type":"exact"},{"name":"normal error-free translesion synthesis of cyclobutane pyrimidine dimers during mitotic cell cycle","type":"related"},{"name":"normal error-free translesion synthesis of cyclobutane pyrimidine dimers during vegetative growth","type":"exact"}],"termid":"FYPO:0005328"}


id: GO:0032006
data:
  {"annotated_genes":["SJAG_03928","SJAG_02765","SJAG_00143","SJAG_02424","SJAG_00169","SJAG_03678","SJAG_05184","SJAG_06588","SJAG_04249","SJAG_00688","SJAG_00289","SJAG_04206","SJAG_00209","SJAG_05030","SJAG_03355","SJAG_05346","SJAG_03072","SJAG_00991","SJAG_02231","SJAG_03089","SJAG_03371","SJAG_03501","SJAG_01184","SJAG_00561","SJAG_01032","SJAG_01187","SJAG_02605","SJAG_03907","SJAG_01142","SJAG_03486","SJAG_00875","SJAG_03405","SJAG_00457","SJAG_04496","SJAG_01983","SJAG_04235","SJAG_03720","SJAG_03799","SJAG_00824","SJAG_04910"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032007"},{"annotations":[103451,90232,112306,105316,99074,103201,107014,95631,84093,94934,113117,110043,112559,89380,110641,112201,109222,105725,114289,92160,97507,101175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904262"},{"annotations":[112347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903940"},{"annotations":[101176,102614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032008"},{"annotations":[106596,108922,84383,94070,114428,84094,85487,90378,92161,103202,105317],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904263"},{"annotations":[93808,103045,87246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904515"},{"annotations":[103902,90115,101177,111548,88945,113865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903432"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of TOR signaling.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"TOR signaling","termid":"GO:0031929"}],"gene_count":40,"genes_by_uniquename":{"SJAG_00143":null,"SJAG_00169":null,"SJAG_00209":null,"SJAG_00289":null,"SJAG_00457":null,"SJAG_00561":null,"SJAG_00688":null,"SJAG_00824":null,"SJAG_00875":null,"SJAG_00991":null,"SJAG_01032":null,"SJAG_01142":null,"SJAG_01184":null,"SJAG_01187":null,"SJAG_01983":null,"SJAG_02231":null,"SJAG_02424":null,"SJAG_02605":null,"SJAG_02765":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03355":null,"SJAG_03371":null,"SJAG_03405":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03678":null,"SJAG_03720":null,"SJAG_03799":null,"SJAG_03907":null,"SJAG_03928":null,"SJAG_04206":null,"SJAG_04235":null,"SJAG_04249":null,"SJAG_04496":null,"SJAG_04910":null,"SJAG_05030":null,"SJAG_05184":null,"SJAG_05346":null,"SJAG_06588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of TOR signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of TOR signaling cascade","type":"related"},{"name":"regulation of TOR signaling pathway","type":"exact"},{"name":"regulation of TOR signalling pathway","type":"exact"},{"name":"regulation of target of rapamycin signaling pathway","type":"exact"},{"name":"regulation of target of rapamycin signalling pathway","type":"exact"}],"termid":"GO:0032006","terms_by_termid":{"GO:0032007":null,"GO:0032008":null,"GO:1903432":null,"GO:1903940":null,"GO:1904262":null,"GO:1904263":null,"GO:1904515":null}}


id: PBO:0091083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V0 subunit e","termid":"PBO:0091083"}


id: PBO:0080281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 44 pseudogene","termid":"PBO:0080281"}


id: GO:0015673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of silver (Ag+) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transport","termid":"GO:0000041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"silver ion transport","synonyms":[{"name":"silver transport","type":"exact"}],"termid":"GO:0015673"}


id: GO:0019764
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete high affinity Fc receptor activity (obsolete GO:0019764)","synonyms":[{"name":"high affinity Fc receptor activity","type":"exact"}],"termid":"GO:0019764"}


id: GO:0002788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antifungal peptide production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide production","termid":"GO:0002784"},{"relation_name":"is_a","term_name":"regulation of defense response to fungus","termid":"GO:1900150"},{"relation_name":"regulates","term_name":"antifungal peptide production","termid":"GO:0002781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of antifungal peptide production","termid":"GO:0002788"}


id: GO:0007123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete bud scar accumulation (obsolete GO:0007123)","synonyms":[{"name":"bud scar accumulation","type":"exact"}],"termid":"GO:0007123"}


id: PBO:0043642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 4","termid":"PBO:0043642"}


id: GO:1900549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving N',N'',N'''-triacetylfusarinine C.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"N',N'',N'''-triacetylfusarinine C metabolic process","synonyms":[{"name":"N',N'',N'''-triacetylfusarinine C metabolism","type":"exact"}],"termid":"GO:1900549"}


id: PBO:0040944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 15","termid":"PBO:0040944"}


id: SO:0000955
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, double-stranded DNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"double","termid":"SO:0000985"},{"relation_name":"is_a","term_name":"DNA_chromosome","termid":"SO:0000954"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double_stranded_DNA_chromosome","synonyms":[{"name":"double stranded DNA chromosome","type":"exact"}],"termid":"SO:0000955"}


id: PBO:0013760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic glutamate-tRNA ligase gus1 (predicted)","termid":"PBO:0013760"}


id: PBO:0066561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rh associated glycoprotein","termid":"PBO:0066561"}


id: GO:0052238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The movement of a motile cell or organism in response to environmental oxygen on or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete aerotaxis on or near other organism involved in symbiotic interaction (obsolete GO:0052238)","synonyms":[{"name":"aerotaxis on or near other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052238"}


id: GO:0052730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + sarcosine = S-adenosyl-L-homocysteine + N,N-dimethylglycine.","definition_xrefs":["EC:2.1.1.157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"sarcosine N-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-9679","KEGG_REACTION:R07243","EC:2.1.1.162","RHEA:15453","EC:2.1.1.156"],"synonyms":[{"name":"S-adenosyl-L-methionine:N,N-sarcosine N-methyltransferase activity","type":"related"},{"name":"SDMT","type":"related"}],"termid":"GO:0052730"}


id: PATO:0002630
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An occurrence quality inhering in a bearer by virtue of the bearer's having a course that occurs occasionally.","definition_xrefs":["PATO:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"episodic","termid":"PATO:0002630"}


id: MOD:00666
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an octanoyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"octanoylated residue","synonyms":[{"name":"OctRes","type":"exact"}],"termid":"MOD:00666"}


id: GO:1900459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of brassinosteroid mediated signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:21855796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of brassinosteroid mediated signaling pathway","termid":"GO:1900457"},{"relation_name":"positively_regulates","term_name":"brassinosteroid mediated signaling pathway","termid":"GO:0009742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of brassinosteroid mediated signaling pathway","synonyms":[{"name":"activation of brassinosteroid mediated signaling pathway","type":"narrow"},{"name":"activation of brassinosteroid mediated signalling","type":"exact"},{"name":"positive regulation of brassinosteroid mediated signalling","type":"exact"},{"name":"up regulation of brassinosteroid mediated signaling pathway","type":"exact"},{"name":"up regulation of brassinosteroid mediated signalling","type":"exact"},{"name":"up-regulation of brassinosteroid mediated signaling pathway","type":"exact"},{"name":"up-regulation of brassinosteroid mediated signalling","type":"exact"},{"name":"upregulation of brassinosteroid mediated signaling pathway","type":"exact"},{"name":"upregulation of brassinosteroid mediated signalling","type":"exact"}],"termid":"GO:1900459"}


id: PBO:0087122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING-H2 domain core subunit of multiple ubiquitin ligase complexes; subunit of Skp1-Cullin-F-box (SCF) that tethers the Cdc34p (E2) and Cdc53p (cullin) SCF subunits, and is required for degradation of Gic2p, Far1p, Sic1p and Cln2p; subunit of the Rtt101p-Mms1p-Mms22p ubiquitin ligase that stabilizes replication forks after DNA lesions; subunit of the Cul3p-Elc1p-Ela1p ubiquitin ligase involved in Rpb1p degradation as part of transcription-coupled repair","termid":"PBO:0087122"}


id: PBO:0068369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 152","termid":"PBO:0068369"}


id: PBO:0017924
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nemaline Myopathy","termid":"PBO:0017924"}


id: GO:0043652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of the apoptotic cell by phagocytosis, by a neighboring cell or by a phagocyte.","definition_xrefs":["GOC:rk","PMID:15536015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phagocytosis, engulfment","termid":"GO:0006911"},{"relation_name":"part_of","term_name":"apoptotic cell clearance","termid":"GO:0043277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"engulfment of apoptotic cell","synonyms":[{"name":"engulfment of apoptotic cell corpse","type":"exact"},{"name":"engulfment of cell corpse","type":"exact"}],"termid":"GO:0043652"}


id: GO:0090085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein deubiquitination. Protein deubiquitination is the removal of one or more ubiquitin groups from a protein.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification by small protein conjugation or removal","termid":"GO:1903320"},{"relation_name":"regulates","term_name":"protein deubiquitination","termid":"GO:0016579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"regulation of protein deubiquitination","termid":"GO:0090085"}


id: PBO:0074832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 28","termid":"PBO:0074832"}


id: PBO:0090157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit Pfd1","termid":"PBO:0090157"}


id: GO:2000108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of leukocyte apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"is_a","term_name":"regulation of leukocyte apoptotic process","termid":"GO:2000106"},{"relation_name":"positively_regulates","term_name":"leukocyte apoptotic process","termid":"GO:0071887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of leukocyte apoptotic process","synonyms":[{"name":"positive regulation of leukocyte apoptosis","type":"narrow"}],"termid":"GO:2000108"}


id: PR:Q09853
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein MON2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01811","PANTHER:PTHR10663:SF5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein MON2 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23D3.13c","secondary_identifiers":["UniProtKB:Q09853"],"synonyms":[{"name":"Spom972h-MON2","type":"exact"}],"termid":"PR:Q09853"}


id: PBO:0035875
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3_acetylation_at_centromere_central_core_during_vegetative_growth","termid":"PBO:0035875"}


id: PBO:0002513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroorotase Ura2 (predicted)","termid":"PBO:0002513"}


id: GO:0016231
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-glucosamine residues in N-acetyl-beta-D-glucosaminides.","definition_xrefs":["EC:3.2.1.52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-N-acetylhexosaminidase activity","termid":"GO:0004563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"beta-N-acetylglucosaminidase activity","termid":"GO:0016231"}


id: PBO:0061270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH oxidase 1","termid":"PBO:0061270"}


id: PBO:0041907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cbl proto-oncogene C","termid":"PBO:0041907"}


id: PBO:0056567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucolipin TRP cation channel 2","termid":"PBO:0056567"}


id: GO:0102952
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + coniferyl aldehyde = H+ + coniferaldehyde glucoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-glucose:coniferaldehyde 4-beta-D-glucosyltransferase activity (obsolete GO:0102952)","termid":"GO:0102952"}


id: PBO:0050192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene","termid":"PBO:0050192"}


id: GO:0052497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism reduces the flow of fluid within the xylem, the tissue in plants that carries water and nutrients up from the roots to the shoot and leaves, of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete occlusion by organism of xylem in other organism involved in symbiotic interaction (obsolete GO:0052497)","synonyms":[{"name":"occlusion by organism of xylem in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052497"}


id: PBO:0089871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine decarboxylase T subunit","termid":"PBO:0089871"}


id: PBO:0055981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat neuronal 4","termid":"PBO:0055981"}


id: GO:0090346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving organofluorine compounds, as carried out by individual cells.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular organohalogen metabolic process","termid":"GO:0090345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular organofluorine metabolic process","termid":"GO:0090346"}


id: PBO:0050103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 13","termid":"PBO:0050103"}


id: GO:1902049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of neosartoricin.","definition_xrefs":["GOC:TermGenie","GOC:di","PMID:23368997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"polyketide catabolic process","termid":"GO:0030640"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"neosartoricin metabolic process","termid":"GO:1902048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"neosartoricin catabolic process","synonyms":[{"name":"neosartoricin breakdown","type":"exact"},{"name":"neosartoricin catabolism","type":"exact"},{"name":"neosartoricin degradation","type":"exact"}],"termid":"GO:1902049"}


id: PBO:0077710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"troponin T3, fast skeletal type","termid":"PBO:0077710"}


id: RO:0002100
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Relation between a neuron and an anatomical structure that its soma is part of.","direct_ancestors":[{"relation_name":"is_a","term_name":"overlaps","termid":"RO:0002131"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_soma_location","termid":"RO:0002100"}


id: GO:0001533
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A type of plasma membrane that has been modified through addition of distinct intracellular and extracellular components, including ceramide, found in cornifying epithelial cells (corneocytes).","definition_xrefs":["PMID:15803139","PMID:11112355","GOC:add","PMID:11590230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"cornified envelope","termid":"GO:0001533"}


id: PBO:0028869
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_snoRNA_level","termid":"PBO:0028869"}


id: GO:0050928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemotaxis","termid":"GO:0050922"},{"relation_name":"is_a","term_name":"regulation of positive chemotaxis","termid":"GO:0050926"},{"relation_name":"negatively_regulates","term_name":"positive chemotaxis","termid":"GO:0050918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of positive chemotaxis","synonyms":[{"name":"down regulation of positive chemotaxis","type":"exact"},{"name":"down-regulation of positive chemotaxis","type":"exact"},{"name":"downregulation of positive chemotaxis","type":"exact"},{"name":"inhibition of positive chemotaxis","type":"narrow"}],"termid":"GO:0050928"}


id: GO:0007180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta ligand binding to type II receptor (obsolete GO:0007180)","synonyms":[{"name":"TGF-beta ligand binding to type II receptor","type":"exact"},{"name":"TGFbeta ligand binding to type II receptor","type":"exact"},{"name":"transforming growth factor beta ligand binding to type II receptor","type":"exact"}],"termid":"GO:0007180"}


id: PATO:0000753
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000753 spontaneous activity value (obsolete PATO:0000753)","termid":"PATO:0000753"}


id: GO:0007612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience.","definition_xrefs":["ISBN:0582227089","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"learning or memory","termid":"GO:0007611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"learning","secondary_identifiers":["Wikipedia:Learning"],"termid":"GO:0007612"}


id: GO:1990374
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A inward rectifier potassium channel complex. Homo- or heterotetramer composed of subunits of the eukaryotic Kir2 protein family. Plays a key role in maintaining the correct resting potential in eukaryotic cells.","definition_xrefs":["PMID:16834334","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inward rectifier potassium channel complex","termid":"GO:1902937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"Kir2 inward rectifier potassium channel complex","synonyms":[{"name":"Kir2.1 complex","type":"narrow"}],"termid":"GO:1990374"}


id: PBO:0063587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 2","termid":"PBO:0063587"}


id: SO:0000604
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Edited mRNA sequence mediated by a single guide RNA (SO:0000602).","direct_ancestors":[{"relation_name":"is_a","term_name":"edited_transcript_feature","termid":"SO:0000579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"editing_block","synonyms":[{"name":"editing block","type":"exact"}],"termid":"SO:0000604"}


id: PBO:0055845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat, Ig-like and transmembrane domains 1","termid":"PBO:0055845"}


id: PBO:0060395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD4 binding protein 1","termid":"PBO:0060395"}


id: GO:0075511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Viral-induced lysis of the macropinosome involved in the uptake of a virus into a host cell. Occurs after internalization of the virus in a macropinosome, and results in the release of viral contents from the macropinosome into the host cell cytoplasm.","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysis of host organelle involved in viral entry into host cell","termid":"GO:0039664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macropinosome lysis involved in viral entry into host cell","termid":"GO:0075511"}


id: PBO:0086627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and to the nucleus","termid":"PBO:0086627"}


id: PBO:0091964
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previously curated onto incorrect strand","termid":"PBO:0091964"}


id: PBO:0029579
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_cellular_reactive_oxygen_species_level","termid":"PBO:0029579"}


id: GO:0044260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass, as carried out by individual cells.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular macromolecule metabolic process (obsolete GO:0044260)","synonyms":[{"name":"cellular biopolymer metabolic process","type":"exact"},{"name":"cellular macromolecule metabolism","type":"exact"}],"termid":"GO:0044260"}


id: GO:0016419
data:
  {"annotated_genes":["SJAG_03972","SJAG_04107"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84188,96802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004314"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a malonyl group to a sulfur atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-acyltransferase activity","termid":"GO:0016417"},{"relation_name":"is_a","term_name":"malonyltransferase activity","termid":"GO:0016420"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03972":null,"SJAG_04107":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"S-malonyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016419","terms_by_termid":{"GO:0004314":null}}


id: PBO:0028297
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_old_growing_cell_tip","termid":"PBO:0028297"}


id: PR:O94406
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-splicing factor 18 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04959"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor 18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.14","secondary_identifiers":["UniProtKB:O94406"],"synonyms":[{"name":"Spom972h-PRPF18","type":"exact"}],"termid":"PR:O94406"}


id: PBO:0038569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin binding LIM protein family member 3","termid":"PBO:0038569"}


id: GO:0045704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of salivary gland determination.","definition_xrefs":["GOC:tb","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"salivary gland boundary specification","termid":"GO:0007432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of salivary gland boundary specification","synonyms":[{"name":"regulation of salivary gland determination","type":"exact"}],"termid":"GO:0045704"}


id: PR:O74435
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A centrin-3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04288","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.04","secondary_identifiers":["UniProtKB:O74435"],"synonyms":[{"name":"Spom972h-CETN3","type":"exact"}],"termid":"PR:O74435"}


id: PBO:0088176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yeast homolog of human CHMP7, localizes to the endoplasmic reticulum presumably as part of an ESCRT-III like complex; null mutant has growth defect at 37 C in an apq12 deletion background; non-essential gene","termid":"PBO:0088176"}


id: GO:1900509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of pentose catabolic process to ethanol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of pentose catabolic process to ethanol (obsolete GO:1900509)","synonyms":[{"name":"regulation of pentose catabolism to ethanol","type":"exact"}],"termid":"GO:1900509"}


id: FYECO:0000417
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose (typically <2% w/v), salts, water and with L-glutamatic acid as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, methionine nitrogen source","synonyms":[{"name":"glucose minimal medium, methionine nitrogen source","type":"exact"},{"name":"standard glucose minimal medium, methionine nitrogen source","type":"related"}],"termid":"FYECO:0000417"}


id: FYPO:0001905
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the number, structure, and orientation of microtubules in the mitotic spindle are normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"},{"relation_name":"part_of","term_name":"normal mitotic spindle","termid":"FYPO:0001399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"part_of","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal mitotic spindle microtubules","synonyms":[{"name":"normal mitotic spindle microtubules during vegetative growth","type":"exact"},{"name":"normal spindle microtubules during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001905"}


id: GO:0046205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nor-spermidine, a compound related to spermidine, N-(3-aminopropyl)-1,4-diaminobutane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine catabolic process","termid":"GO:0006598"},{"relation_name":"is_a","term_name":"nor-spermidine metabolic process","termid":"GO:0046204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nor-spermidine catabolic process","synonyms":[{"name":"nor-spermidine breakdown","type":"exact"},{"name":"nor-spermidine catabolism","type":"exact"},{"name":"nor-spermidine degradation","type":"exact"}],"termid":"GO:0046205"}


id: GO:0004408
data:
  {"annotated_genes":["SJAG_03199","SJAG_04008"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90498,103532],"is_not":false,"summary":null,"term":"GO:0004408"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: holocytochrome c = apocytochrome c + heme.","definition_xrefs":["EC:4.4.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03199":null,"SJAG_04008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"holocytochrome-c synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:HOLOCYTOCHROME-C-SYNTHASE-RXN","Reactome:R-HSA-9866217","RHEA:22648"],"synonyms":[{"name":"cytochrome c heme-lyase activity","type":"related"},{"name":"cytochrome c synthase activity","type":"related"},{"name":"holocytochrome c synthetase activity","type":"related"},{"name":"holocytochrome-c apocytochrome-c-lyase (heme-forming)","type":"related"},{"name":"holocytochrome-c apocytochrome-c-lyase activity","type":"related"}],"termid":"GO:0004408","terms_by_termid":{"GO:0004408":null}}


id: PBO:0029406
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_NADPH-hemoprotein_reductase_activity","termid":"PBO:0029406"}


id: FYPO:0006394
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which localization of the meiotic spindle is abnormal during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle process","termid":"FYPO:0002739"},{"relation_name":"is_a","term_name":"localization phenotype during meiotic cell cycle","termid":"FYPO:0006393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0000631","FYPO:0000054","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal meiotic spindle localization","synonyms":[{"name":"abnormal establishment of meiotic spindle localization","type":"exact"},{"name":"abnormal meiotic spindle localisation","type":"exact"},{"name":"abnormal spindle localization during meiosis","type":"exact"},{"name":"abnormal spindle localization during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0006394"}


id: FYPO:0004018
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mitochondrial electron transport from NADH to ubiquinone is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular respiration","termid":"FYPO:0000566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal mitochondrial electron transport, NADH to ubiquinone","synonyms":[{"name":"normal NADH cytochrome c oxidoreductase","type":"related"},{"name":"normal NADH dehydrogenase (quinone) activity and ubiquinol-cytochrome-c reductase activity","type":"related"},{"name":"normal mitochondrial electron transport, NADH to ubiquinone, during mitotic cell cycle","type":"related"},{"name":"normal mitochondrial electron transport, NADH to ubiquinone, during vegetative growth","type":"exact"}],"termid":"FYPO:0004018"}


id: PBO:0075087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 137","termid":"PBO:0075087"}


id: PBO:0073440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Scm like with four mbt domains 2","termid":"PBO:0073440"}


id: FYPO:0000072
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of benomyl than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002682","FYPO:0000139","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"resistance to benomyl","synonyms":[{"name":"resistance to benomyl during mitotic cell cycle","type":"related"},{"name":"resistance to benomyl during vegetative growth","type":"exact"},{"name":"resistance to methyl [1-(butylcarbamoyl)-1H-benzimidazol-2-yl]carbamate","type":"exact"},{"name":"resistant to benomyl","type":"exact"}],"termid":"FYPO:0000072"}


id: PBO:0046705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS variant transcription factor 4","termid":"PBO:0046705"}


id: GO:0048499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the membrane surrounding a synaptic vesicle.","definition_xrefs":["GOC:mah","PMID:10620806","GOC:dph","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"endomembrane system organization","termid":"GO:0010256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"synaptic vesicle membrane organization","synonyms":[{"name":"SLMV biogenesis","type":"narrow"},{"name":"synaptic vesicle membrane organisation","type":"exact"},{"name":"synaptic vesicle membrane organization and biogenesis","type":"related"}],"termid":"GO:0048499"}


id: PBO:0080088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 49","termid":"PBO:0080088"}


id: PBO:0044759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 43","termid":"PBO:0044759"}


id: GO:0000241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase which follows diplotene during prophase I of meiosis, the separation of homologous chromosomes is complete and crossing over has occurred.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I cell cycle phase","termid":"GO:0098764"},{"relation_name":"part_of","term_name":"meiotic prophase I","termid":"GO:0007128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007128"}],"interesting_parent_ids":["GO:0008150","GO:0007128"],"is_obsolete":false,"name":"diakinesis","secondary_identifiers":["Wikipedia:Meiosis#Diakinesis","Wikipedia:Diakinesis"],"termid":"GO:0000241"}


id: PBO:0042329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD52 molecule","termid":"PBO:0042329"}


id: GO:0075279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that leads to the formation of a uredinium, a reddish, pustule-like structure formed by a rust fungus and consisting of uredospores.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"uredinium development","synonyms":[{"name":"development of uredium","type":"exact"}],"termid":"GO:0075279"}


id: GO:1902069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sphingolipid signaling.","definition_xrefs":["PMID:20870412","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of sphingolipid mediated signaling pathway","termid":"GO:1902068"},{"relation_name":"negatively_regulates","term_name":"sphingolipid mediated signaling pathway","termid":"GO:0090520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of sphingolipid mediated signaling pathway","synonyms":[{"name":"down regulation of sphingolipid mediated signaling pathway","type":"exact"},{"name":"down regulation of sphingolipid signaling pathway","type":"related"},{"name":"down-regulation of sphingolipid mediated signaling pathway","type":"exact"},{"name":"down-regulation of sphingolipid signaling pathway","type":"related"},{"name":"downregulation of sphingolipid mediated signaling pathway","type":"exact"},{"name":"downregulation of sphingolipid signaling pathway","type":"related"},{"name":"inhibition of sphingolipid mediated signaling pathway","type":"narrow"},{"name":"inhibition of sphingolipid signaling pathway","type":"related"},{"name":"negative regulation of sphingolipid signaling pathway","type":"related"}],"termid":"GO:1902069"}


id: PBO:0083764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential light chain for Myo1p; light chain for Myo2p; stabilizes Myo2p by binding to the neck region; interacts with Myo1p, Iqg1p, and Myo2p to coordinate formation and contraction of the actomyosin ring with targeted membrane deposition","termid":"PBO:0083764"}


id: FYPO:0003600
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any rRNA precursor measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered rRNA or precursor level","termid":"FYPO:0005996"},{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased rRNA precursor level","synonyms":[{"name":"increased rRNA precursor accumulation","type":"related"},{"name":"increased rRNA precursor level during mitotic cell cycle","type":"related"},{"name":"increased rRNA precursor level during vegetative growth","type":"exact"},{"name":"increased rRNA precursor transcript level","type":"exact"}],"termid":"FYPO:0003600"}


id: PBO:0070746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 2","termid":"PBO:0070746"}


id: PBO:0071597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 14","termid":"PBO:0071597"}


id: SO:0001978
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence where developer information is encoded.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"engineered_region","termid":"SO:0000804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signature","synonyms":[{"name":"DNA signature","type":"exact"}],"termid":"SO:0001978"}


id: GO:0070126
data:
  {"annotated_genes":["SJAG_00308","SJAG_05221","SJAG_03232","SJAG_00286","SJAG_01518"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91561,92000,94711,98126,100754],"is_not":false,"summary":null,"term":"GO:0070126"}]},"cv_name":"biological_process","definition":"The process resulting in the release of a polypeptide chain from the ribosome in a mitochondrion, usually in response to a termination codon (note that mitochondria use variants of the universal genetic code that differ between different taxa).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational termination","termid":"GO:0006415"},{"relation_name":"part_of","term_name":"mitochondrial translation","termid":"GO:0032543"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00286":null,"SJAG_00308":null,"SJAG_01518":null,"SJAG_03232":null,"SJAG_05221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0140053","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"mitochondrial translational termination","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial translation termination","type":"exact"}],"termid":"GO:0070126","terms_by_termid":{"GO:0070126":null}}


