# terms

id: GO:0046484
data:
  {"annotated_genes":["SJAG_00827"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052837"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving oxazole or thiazole, five-membered heterocyclic ring structures containing an oxygen and a sulfur, respectively, in the 1-position and a nitrogen in the 3-position.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00827":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oxazole or thiazole metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"oxazole or thiazole metabolism","type":"exact"}],"termid":"GO:0046484","terms_by_termid":{"GO:0052837":null}}


id: GO:0008438
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: diphosphate + a purine nucleoside = phosphate + a purine mononucleotide.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-phosphatidylinositol-5-phosphate kinase (obsolete GO:0008438)","synonyms":[{"name":"1-phosphatidylinositol-5-phosphate kinase","type":"exact"}],"termid":"GO:0008438"}


id: GO:0019163
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyridoxamine 5'-phosphate + 2-oxoglutarate = pyridoxal 5'-phosphate + D-glutamate.","definition_xrefs":["EC:2.6.1.54"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016769","GO:0016740"],"is_obsolete":false,"name":"pyridoxamine-phosphate transaminase activity","secondary_identifiers":["RHEA:15877","MetaCyc:PYRDAMPTRANS-RXN"],"synonyms":[{"name":"pyridoxamine 5'-phosphate transaminase activity","type":"related"},{"name":"pyridoxamine 5'-phosphate-alpha-ketoglutarate transaminase activity","type":"related"},{"name":"pyridoxamine phosphate aminotransferase activity","type":"related"},{"name":"pyridoxamine-5'-phosphate:2-oxoglutarate aminotransferase (D-glutamate-forming)","type":"related"},{"name":"pyridoxamine-phosphate aminotransferase activity","type":"exact"}],"termid":"GO:0019163"}


id: PBO:0060354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin XIX","termid":"PBO:0060354"}


id: PBO:0049996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeodomain interacting protein kinase 2","termid":"PBO:0049996"}


id: GO:0042404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any of the compounds secreted by the thyroid gland, largely thyroxine and triiodothyronine.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"cellular modified amino acid catabolic process","termid":"GO:0042219"},{"relation_name":"is_a","term_name":"thyroid hormone metabolic process","termid":"GO:0042403"},{"relation_name":"is_a","term_name":"hormone catabolic process","termid":"GO:0042447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thyroid hormone catabolic process","synonyms":[{"name":"thyroid hormone breakdown","type":"exact"},{"name":"thyroid hormone catabolism","type":"exact"},{"name":"thyroid hormone degradation","type":"exact"}],"termid":"GO:0042404"}


id: GO:1900191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of single-species biofilm formation.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of single-species biofilm formation","termid":"GO:1900190"},{"relation_name":"negatively_regulates","term_name":"single-species biofilm formation","termid":"GO:0044010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of single-species biofilm formation","synonyms":[{"name":"down regulation of single-species biofilm formation","type":"exact"},{"name":"down-regulation of single-species biofilm formation","type":"exact"},{"name":"downregulation of single-species biofilm formation","type":"exact"},{"name":"inhibition of single-species biofilm formation","type":"narrow"}],"termid":"GO:1900191"}


id: PATO:0000695
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's occurring or existing at the same time or having the same period or phase.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synchronous","termid":"PATO:0000695"}


id: GO:1900682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of octadecene.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene biosynthetic process","termid":"GO:0043450"},{"relation_name":"is_a","term_name":"octadecene metabolic process","termid":"GO:1900681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"octadecene biosynthetic process","synonyms":[{"name":"1-octadecene biosynthetic process","type":"exact"},{"name":"octadecene anabolism","type":"exact"},{"name":"octadecene biosynthesis","type":"exact"},{"name":"octadecene formation","type":"exact"},{"name":"octadecene synthesis","type":"exact"}],"termid":"GO:1900682"}


id: PBO:0013022
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human DHODH","termid":"PBO:0013022"}


id: PBO:0041633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACNA1C antisense RNA 3","termid":"PBO:0041633"}


id: GO:0006869
data:
  {"annotated_genes":["SJAG_03172","SJAG_03746","SJAG_02943","SJAG_06440","SJAG_01722","SJAG_03690","SJAG_16459","SJAG_05268","SJAG_04734","SJAG_00587","SJAG_03718","SJAG_03741","SJAG_00669","SJAG_03338","SJAG_00018","SJAG_01095","SJAG_01225","SJAG_03851","SJAG_02897","SJAG_01470","SJAG_00589","SJAG_05209","SJAG_00576","SJAG_04370","SJAG_00355","SJAG_03209","SJAG_03721","SJAG_02132","SJAG_02516","SJAG_03416","SJAG_01945","SJAG_03050","SJAG_04413","SJAG_02581","SJAG_02114","SJAG_02323","SJAG_00261","SJAG_03774","SJAG_01229","SJAG_01590","SJAG_01305","SJAG_01437","SJAG_03710","SJAG_01329","SJAG_01731","SJAG_02957","SJAG_02375","SJAG_00230","SJAG_01407"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140331"},{"annotations":[113586,90303,114741,97846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035621"},{"annotations":[90482,108616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034203"},{"annotations":[64482,56949,62235,60922,105558,93611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120009"},{"annotations":[93551,97339,103573,86959,100107,93612,103702,85293,102786,94692,105574,112317,96583,101890,104703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120010"},{"annotations":[102373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120011"},{"annotations":[97722,97533,102374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032366"},{"annotations":[60416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034204"},{"annotations":[98399,86574,86575,95531,101125,93990,97341,86573,86578,101570,96251,94125,105560,86576,108553,86580,86577,98279,86581,86579,90483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045332"},{"annotations":[93613,60921,64481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015914"},{"annotations":[92686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017121"},{"annotations":[105413,107389,98673,104260,112295,90307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015918"}]},"cv_name":"biological_process","definition":"The directed movement of lipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"},{"relation_name":"part_of","term_name":"lipid localization","termid":"GO:0010876"}],"gene_count":49,"genes_by_uniquename":{"SJAG_00018":null,"SJAG_00230":null,"SJAG_00261":null,"SJAG_00355":null,"SJAG_00576":null,"SJAG_00587":null,"SJAG_00589":null,"SJAG_00669":null,"SJAG_01095":null,"SJAG_01225":null,"SJAG_01229":null,"SJAG_01305":null,"SJAG_01329":null,"SJAG_01407":null,"SJAG_01437":null,"SJAG_01470":null,"SJAG_01590":null,"SJAG_01722":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_02114":null,"SJAG_02132":null,"SJAG_02323":null,"SJAG_02375":null,"SJAG_02516":null,"SJAG_02581":null,"SJAG_02897":null,"SJAG_02943":null,"SJAG_02957":null,"SJAG_03050":null,"SJAG_03172":null,"SJAG_03209":null,"SJAG_03338":null,"SJAG_03416":null,"SJAG_03690":null,"SJAG_03710":null,"SJAG_03718":null,"SJAG_03721":null,"SJAG_03741":null,"SJAG_03746":null,"SJAG_03774":null,"SJAG_03851":null,"SJAG_04370":null,"SJAG_04413":null,"SJAG_04734":null,"SJAG_05209":null,"SJAG_05268":null,"SJAG_06440":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"lipid transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0006869","terms_by_termid":{"GO:0015914":null,"GO:0015918":null,"GO:0017121":null,"GO:0032366":null,"GO:0034203":null,"GO:0034204":null,"GO:0035621":null,"GO:0045332":null,"GO:0120009":null,"GO:0120010":null,"GO:0120011":null,"GO:0140331":null}}


id: GO:0080050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of seed development.","definition_xrefs":["PMID:19141706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"seed development","termid":"GO:0048316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of seed development","termid":"GO:0080050"}


id: GO:0016404
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (5Z,13E)-(15S)-11-alpha,15-dihydroxy-9-oxoprost-13-enoate + NAD+ = (5Z,13E)-11-alpha-hydroxy-9,15-dioxoprost-13-enoate + NADH + H+.","definition_xrefs":["EC:1.1.1.141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"15-hydroxyprostaglandin dehydrogenase (NAD+) activity","secondary_identifiers":["Reactome:R-HSA-2161779","RHEA:11876","MetaCyc:1.1.1.141-RXN","Reactome:R-HSA-9023968","Reactome:R-HSA-9024766","Reactome:R-HSA-2161662"],"synonyms":[{"name":"(5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate:NAD+ 15-oxidoreductase activity","type":"related"},{"name":"11alpha,15-dihydroxy-9-oxoprost-13-enoate:NAD+ 15-oxidoreductase activity","type":"related"},{"name":"15-OH-PGDH","type":"related"},{"name":"15-hydroxyprostaglandin dehydrogenase activity","type":"related"},{"name":"15-hydroxyprostanoic dehydrogenase activity","type":"related"},{"name":"NAD+-dependent 15-hydroxyprostaglandin dehydrogenase (type I)","type":"related"},{"name":"NAD-specific 15-hydroxyprostaglandin dehydrogenase activity","type":"related"},{"name":"prostaglandin dehydrogenase activity","type":"related"}],"termid":"GO:0016404"}


id: GO:0120021
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Removes oxysterol from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle.","definition_xrefs":["GOC:krc","PMID:24220498","PMID:20823909","PMID:25797198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol transfer activity","termid":"GO:0120015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0120013"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0120013"],"is_obsolete":false,"name":"oxysterol transfer activity","synonyms":[{"name":"intermembrane oxysterol transfer activity","type":"narrow"},{"name":"oxysterol carrier activity","type":"exact"}],"termid":"GO:0120021"}


id: PBO:0050978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 22","termid":"PBO:0050978"}


id: PBO:0069611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 888, pseudogene","termid":"PBO:0069611"}


id: PBO:0028472
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_succinate_dehydrogenase_(ubiquinone)_activity","termid":"PBO:0028472"}


id: GO:0090067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the size of the thalamus. The thalamus is a part of the diencephalon that is composed of the dorsal thalamus and the ventral thalamus.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure size","termid":"GO:0090066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of thalamus size","termid":"GO:0090067"}


id: GO:1902897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of postsynaptic density protein 95 clustering.","definition_xrefs":["GOC:TermGenie","PMID:10570482","GO_REF:0000058","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to membrane","termid":"GO:1905475"},{"relation_name":"is_a","term_name":"regulation of postsynaptic density organization","termid":"GO:1905874"},{"relation_name":"regulates","term_name":"postsynaptic density protein 95 clustering","termid":"GO:0097119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of postsynaptic density protein 95 clustering","synonyms":[{"name":"regulation of Dlg4 clustering","type":"exact"},{"name":"regulation of PSD-95 clustering","type":"exact"},{"name":"regulation of post-synaptic density protein 95 clustering","type":"exact"}],"termid":"GO:1902897"}


id: PBO:0058511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5701-1","termid":"PBO:0058511"}


id: GO:1990298
data:
  {"annotated_genes":["SJAG_01082","SJAG_02451"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90254,110549],"is_not":false,"summary":null,"term":"GO:1990298"}]},"cv_name":"cellular_component","definition":"Protein complex that associates with the kinetochores.","definition_xrefs":["PMID:22521786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01082":null,"SJAG_02451":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"bub1-bub3 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990298","terms_by_termid":{"GO:1990298":null}}


id: PBO:0055187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2611","termid":"PBO:0055187"}


id: GO:0031640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in an organism that results in the killing of cells of another organism, including in some cases the death of the other organism. Killing here refers to the induction of death in one cell by another cell, not cell-autonomous death due to internal or other environmental conditions.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell killing","termid":"GO:0001906"},{"relation_name":"is_a","term_name":"disruption of cell in another organism","termid":"GO:0141061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"killing of cells of another organism","secondary_identifiers":["GO:0001908"],"synonyms":[{"name":"killing of cells of other organism","type":"exact"}],"termid":"GO:0031640"}


id: PBO:0016584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, involved in chromatin silencing by small RNA, Snd1","termid":"PBO:0016584"}


id: PBO:0031216
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_Mre11_complex_assembly","termid":"PBO:0031216"}


id: PR:Q9Y7Z6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1539.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7Z6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic chromosome segregation protein C1539.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1539.02","synonyms":[{"name":"Spom972h-SPBC1539.02","type":"exact"}],"termid":"PR:Q9Y7Z6"}


id: PBO:0069807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1093, pseudogene","termid":"PBO:0069807"}


id: PBO:0071707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 5","termid":"PBO:0071707"}


id: PBO:0060638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor coactivator 1","termid":"PBO:0060638"}


id: PBO:0045275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 26","termid":"PBO:0045275"}


id: PBO:0110204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial single stranded DNA specific 5'-3' exodeoxyribonuclease Exo5.2","termid":"PBO:0110204"}


id: PR:000027557
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2A.2 phosphorylated 2 in Schizosaccharomyces pombe. Example: UniProtKB:P04910-1, Ser-122, MOD:00046.","definition_xrefs":["PMID:19965387","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A-beta (Schizosaccharomyces pombe 972h-)","termid":"PR:P04910"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hta2/Phos:(S121)","pombase_gene_id":"SPAC19G12.06c","synonyms":[{"name":"PomBase_original_PRO_term_name: histone H2A.2 phosphorylated 2 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-HTA2/Phos:2","type":"exact"},{"name":"hta2/Phos:(S121)","type":"exact"},{"name":"hta2/Phos:(S122)","type":"exact"}],"termid":"PR:000027557"}


id: GO:0060177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving angiotensin.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of angiotensin metabolic process","synonyms":[{"name":"regulation of angiotensin metabolism","type":"exact"}],"termid":"GO:0060177"}


id: FYPO:0007811
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of CMG replicative helicase activity, the 3'-5' DNA helicase activity that unwinds DNA during nuclear DNA replication, is decreased.","definition_xrefs":["PomBase:mah","PMID:34108240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal 3'-5' DNA helicase activity","termid":"FYPO:0002100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000641","FYPO:0000661","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased CMG replicative helicase activity","synonyms":[{"name":"decreased 3'-5' DNA helicase activity during DNA replication","type":"exact"},{"name":"decreased Cdc45-MCM-GINS helicase activity","type":"exact"},{"name":"decreased Cdc45-MCM-GINS replicative helicase activity","type":"exact"},{"name":"decreased replicative helicase activity","type":"exact"}],"termid":"FYPO:0007811"}


id: PBO:0047421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and WD repeat domain containing 11","termid":"PBO:0047421"}


id: PBO:0063483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase kinase 1 pseudogene 1","termid":"PBO:0063483"}


id: FYPO:0005064
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 in telomeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000871"},{"relation_name":"is_a","term_name":"abnormal histone methylation at telomere during vegetative growth","termid":"FYPO:0007375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0002274","FYPO:0001320","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H3-K9 methylation at telomere during vegetative growth","synonyms":[{"name":"increased histone H3 K9 methylation at telomere during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 methylation at telomere during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K9 methylation at telomeric region during vegetative growth","type":"exact"},{"name":"increased histone H3K9 methylation at telomere during vegetative growth","type":"exact"},{"name":"increased histone H3K9me at telomere during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 methylation at telomere during vegetative growth","type":"exact"}],"termid":"FYPO:0005064"}


id: GO:1904488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A positive regulation of transcription from RNA polymerase II promoter that results in regulation of reactive oxygen species metabolic process.","definition_xrefs":["GOC:TermGenie","PMID:25961505","GO_REF:0000063","GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of reactive oxygen species metabolic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1904488)","synonyms":[{"name":"regulation of ROS metabolic process by activation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ROS metabolic process by activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of ROS metabolic process by positive regulation of gene-specific transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ROS metabolic process by positive regulation of global transcription from Pol II promoter","type":"related"},{"name":"regulation of ROS metabolic process by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of ROS metabolic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of ROS metabolic process by positive regulation of transcription from RNA polymerase II promoter, global","type":"related"},{"name":"regulation of ROS metabolic process by stimulation of global transcription from RNA polymerase II promoter","type":"narrow"},{"name":"regulation of ROS metabolic process by stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of ROS metabolic process by up regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ROS metabolic process by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of ROS metabolic process by up-regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ROS metabolic process by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of ROS metabolic process by upregulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ROS metabolic process by upregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolic process by activation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolic process by positive regulation of gene-specific transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by positive regulation of global transcription from Pol II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolic process by positive regulation of transcription from RNA polymerase II promoter, global","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by stimulation of global transcription from RNA polymerase II promoter","type":"narrow"},{"name":"regulation of reactive oxygen species metabolic process by stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolic process by up regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolic process by up-regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolic process by upregulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by upregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolism by activation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolism by activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolism by positive regulation of gene-specific transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolism by positive regulation of global transcription from Pol II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolism by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolism by positive regulation of transcription from RNA polymerase II promoter, global","type":"related"},{"name":"regulation of reactive oxygen species metabolism by stimulation of global transcription from RNA polymerase II promoter","type":"narrow"},{"name":"regulation of reactive oxygen species metabolism by stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolism by up regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolism by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolism by up-regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolism by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolism by upregulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolism by upregulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1904488"}


id: PBO:0081913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 880","termid":"PBO:0081913"}


id: PBO:0090553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-K ortholog Sim4","termid":"PBO:0090553"}


id: PR:O94363
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding protein Rheb that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR24070:SF274","OMA:SCHPO02469"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein rhb1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.16c","secondary_identifiers":["UniProtKB:O94363"],"synonyms":[{"name":"GTP-binding protein Rheb homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RHEB","type":"exact"}],"termid":"PR:O94363"}


id: PBO:0071965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase A4","termid":"PBO:0071965"}


id: PBO:0087023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L11A; expressed at twice the level of Rpl11Bp; involved in ribosomal assembly; depletion causes degradation of 60S proteins and RNA; homologous to mammalian ribosomal protein L11 and bacterial L5; RPL11A has a paralog, RPL11B, that arose from the whole genome duplication","termid":"PBO:0087023"}


id: PBO:0090425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate acyltransferase","termid":"PBO:0090425"}


id: PBO:0076982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THADA armadillo repeat containing","termid":"PBO:0076982"}


id: GO:0030977
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to taurine.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkanesulfonate binding","termid":"GO:0043210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"taurine binding","termid":"GO:0030977"}


id: FYPO:0000709
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which cell population growth is decreased relative to normal under nitrogen starvation conditions, such as in nitrogen-deficient minimal medium.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell population growth","termid":"FYPO:0000046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002057","FYPO:0000139","FYPO:0001985","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"decreased cell population growth during nitrogen starvation","secondary_identifiers":["FYPO:0002124"],"synonyms":[{"name":"decreased cell population growth during nitrogen depletion","type":"exact"},{"name":"decreased cell population growth during nitrogen deprivation","type":"exact"},{"name":"decreased cell population growth in response to nitrogen starvation","type":"exact"},{"name":"hypersensitive to nitrogen starvation","type":"related"},{"name":"reduced cell population growth during nitrogen starvation","type":"related"},{"name":"sensitive to nitrogen depletion","type":"related"},{"name":"sensitive to nitrogen deprivation","type":"related"},{"name":"sensitive to nitrogen starvation","type":"related"},{"name":"slow cell population growth during nitrogen starvation","type":"narrow"},{"name":"slow cell population growth in nitrogen-deficient minimal medium","type":"related"},{"name":"slow growth during nitrogen starvation","type":"broad"}],"termid":"FYPO:0000709"}


id: PBO:0047104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 153 member C, pseudogene","termid":"PBO:0047104"}


id: PBO:0074468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"submaxillary gland androgen regulated protein 3B","termid":"PBO:0074468"}


id: PBO:0045736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"estrogen receptor binding site associated antigen 9","termid":"PBO:0045736"}


id: GO:1904887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a Wnt signalosome.","definition_xrefs":["GOC:TermGenie","GOC:PARL","PMID:22899650","GO_REF:0000079","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"Wnt signalosome assembly","synonyms":[{"name":"LRP5/6 signalosome assembly","type":"exact"},{"name":"LRP5/6 signalosome formation","type":"exact"},{"name":"LRP6 signalosome assembly","type":"narrow"},{"name":"LRP6 signalosome formation","type":"narrow"},{"name":"Wnt signalosome complex assembly","type":"exact"},{"name":"Wnt signalosome complex formation","type":"exact"},{"name":"Wnt signalosome formation","type":"exact"},{"name":"Wnt-LRP5/6 signalosome assembly","type":"exact"},{"name":"Wnt-LRP5/6 signalosome formation","type":"exact"}],"termid":"GO:1904887"}


id: GO:0046634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of alpha-beta T cell activation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell activation","termid":"GO:0050863"},{"relation_name":"regulates","term_name":"alpha-beta T cell activation","termid":"GO:0046631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of alpha-beta T cell activation","synonyms":[{"name":"regulation of alpha-beta T lymphocyte activation","type":"exact"},{"name":"regulation of alpha-beta T-cell activation","type":"exact"},{"name":"regulation of alpha-beta T-lymphocyte activation","type":"exact"}],"termid":"GO:0046634"}


id: PBO:0030944
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_polymerization_or_depolymerization","termid":"PBO:0030944"}


id: MOD:00074
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to N-methyl-L-phenylalanine.","definition_xrefs":["PubMed:2577730","PubMed:413571","RESID:AA0065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated phenylalanine","termid":"MOD:01063"},{"relation_name":"is_a","term_name":"alpha-amino monomethylated residue","termid":"MOD:01680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methyl-L-phenylalanine","synonyms":[{"name":"(2S)-2-methylamino-3-phenylpropanoic acid","type":"exact"},{"name":"MOD_RES N-methylphenylalanine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N-methyl-L-phenylalanine","type":"exact"},{"name":"N-methylated L-phenylalanine","type":"exact"},{"name":"N-methylphenylalanine","type":"exact"},{"name":"NMe1Phe","type":"exact"}],"termid":"MOD:00074"}


id: PBO:0050130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 40","termid":"PBO:0050130"}


id: PBO:0052391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 28, pseudogene","termid":"PBO:0052391"}


id: PR:P0CT41
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-12 gene.","definition_xrefs":["UniProtKB:P0CT41","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-12 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1020.14","synonyms":[{"name":"Spom972h-Tf2-12","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT41"}


id: PBO:0001376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit Hcn1","termid":"PBO:0001376"}


id: GO:0140945
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl4-[histone H3] + S-adenosyl-L-methionine = H+ + N6-methyl-L-lysyl4-[histone H3] + S-adenosyl-L-homocysteine. This reaction is the addition of a single methyl group to the unmethylated lysine residue at position 4 of histone H3, producing histone H3K4me.","definition_xrefs":["RHEA:60264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K4 methyltransferase activity","termid":"GO:0042800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0008276"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0016741","GO:0008276","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"histone H3K4 monomethyltransferase activity","secondary_identifiers":["EC:2.1.1.364"],"synonyms":[{"name":"histone H3K4 monomethylase activity","type":"exact"},{"name":"histone H4-K4 methylation","type":"broad"},{"name":"histone H4K4 methylation","type":"broad"},{"name":"histone lysine N-monomethyltransferase activity (H3-K4 specific)","type":"exact"}],"termid":"GO:0140945"}


id: GO:0048203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which vesicles are directed to specific destination membranes during transport from the trans-Golgi to the endosome.","definition_xrefs":["GOC:jid","GOC:mah","ISBN:0716731363","PMID:10219233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle targeting, to, from or within Golgi","termid":"GO:0048199"},{"relation_name":"part_of","term_name":"Golgi to endosome transport","termid":"GO:0006895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"vesicle targeting, trans-Golgi to endosome","synonyms":[{"name":"trans-Golgi to endosome targeting","type":"exact"}],"termid":"GO:0048203"}


id: PBO:0062324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 6","termid":"PBO:0062324"}


id: PBO:0049628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 31","termid":"PBO:0049628"}


id: PBO:0079278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TELO2 interacting protein 2","termid":"PBO:0079278"}


id: PBO:0047640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 1A pseudogene 3","termid":"PBO:0047640"}


id: PBO:0067134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 182, pseudogene","termid":"PBO:0067134"}


id: FYPO:0008140
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An abnormal nuclear envelope morpbology in the vegetative growth phase of the life cycle in which the nuclear envelope lumen is larger than normal.","definition_xrefs":["PMID:11839792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope morphology during vegetative growth","termid":"FYPO:0000769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0002403","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"dilated nuclear envelope lumen","termid":"FYPO:0008140"}


id: PBO:0000219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ndr kinase/myotonic dystrophy kinase/cot1/warts family","termid":"PBO:0000219"}


id: PBO:0089822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ndc80 complex subunit Spc24","termid":"PBO:0089822"}


id: PBO:0070664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 35","termid":"PBO:0070664"}


id: PR:000037316
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair protein Crb2 (Schizosaccharomyces pombe) that is phosphorylated in two Thr residues within CDK consensus TP motifs, and a Thr within the sequence VPETV. Example: UniProtKB:P87074-1, Thr-187/Thr-215/Thr-235, MOD:00047.","definition_xrefs":["PomBase:AL","PMID:24074952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair protein Crb2 (Schizosaccharomyces pombe)","termid":"PR:000029999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crb2/Phos(T187,T215,T235)","pombase_gene_id":"SPBC342.05","synonyms":[{"name":"Crb2 phosphorylated","type":"related"},{"name":"DNA repair protein rhp9 phosphorylated 1 (Schizosaccharomyces pombe)","type":"related"},{"name":"PomBase_original_PRO_term_name: DNA repair protein Crb2 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"crb2/Phos(T187,T215,T235)","type":"exact"}],"termid":"PR:000037316"}


id: GO:0042532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a STAT (Signal Transducer and Activator of Transcription) protein.","definition_xrefs":["PMID:11426647","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tyrosine phosphorylation of STAT protein","termid":"GO:0042509"},{"relation_name":"is_a","term_name":"negative regulation of receptor signaling pathway via JAK-STAT","termid":"GO:0046426"},{"relation_name":"is_a","term_name":"negative regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050732"},{"relation_name":"negatively_regulates","term_name":"tyrosine phosphorylation of STAT protein","termid":"GO:0007260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of tyrosine phosphorylation of STAT protein","secondary_identifiers":["GO:0042530","GO:0042512","GO:0042518","GO:0042524","GO:0042521","GO:0042527","GO:0042514"],"synonyms":[{"name":"down regulation of tyrosine phosphorylation of STAT protein","type":"exact"},{"name":"down regulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of STAT protein","type":"exact"},{"name":"down-regulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of STAT protein","type":"exact"},{"name":"downregulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of STAT protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"}],"termid":"GO:0042532"}


id: PR:Q10329
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pre6 gene.","definition_xrefs":["UniProtKB:Q10329","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha type-4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.16","synonyms":[{"name":"Spom972h-pre6","type":"exact"}],"termid":"PR:Q10329"}


id: GO:0021687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the cerebellar molecular layer is generated and organized. The molecular layer is the outermost layer of the cerebellar cortex. It contains the parallel fibers of the granule cells, interneurons such as stellate and basket cells, and the dendrites of the underlying Purkinje cells.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dph","ISBN:0838580343","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"cerebellar molecular layer development","termid":"GO:0021679"},{"relation_name":"part_of","term_name":"cerebellar cortex morphogenesis","termid":"GO:0021696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar molecular layer morphogenesis","termid":"GO:0021687"}


id: PBO:0001055
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.3","termid":"PBO:0001055"}


id: FYPO:0001987
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to pH higher than that of standard S. pombe growth media (about 5.8). Cells stop growing (and may die) at a pH that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to high pH","synonyms":[{"name":"decreased growth during cellular response to high pH","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to high pH","type":"exact"},{"name":"hypersensitive to high pH","type":"exact"},{"name":"sensitive to high pH during mitotic cell cycle","type":"related"},{"name":"sensitive to high pH during vegetative growth","type":"exact"}],"termid":"FYPO:0001987"}


id: GO:0001550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Increase in size of the cumulus surrounding the oocyte including change in morphology due to proliferation and dispersion of cumulus cells.","definition_xrefs":["PMID:30010832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"antral ovarian follicle growth","termid":"GO:0001547"},{"relation_name":"part_of","term_name":"fused antrum stage","termid":"GO:0048165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ovarian cumulus expansion","synonyms":[{"name":"ovarian cumulus growth","type":"related"}],"termid":"GO:0001550"}


id: GO:0090322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of superoxide metabolism, the chemical reactions and pathways involving superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of reactive oxygen species metabolic process","termid":"GO:2000377"},{"relation_name":"regulates","term_name":"superoxide metabolic process","termid":"GO:0006801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of superoxide metabolic process","synonyms":[{"name":"regulation of superoxide metabolism","type":"exact"}],"termid":"GO:0090322"}


id: RO:0002526
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x overlaps the sequence of x if and only if x has a subsequence z and z is a subsequence of y.","direct_ancestors":[{"relation_name":"is_a","term_name":"overlaps","termid":"RO:0002131"},{"relation_name":"is_a","term_name":"sequentially_related_to","termid":"RO:0002514"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"overlaps_sequence_of","termid":"RO:0002526"}


id: GO:0031516
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The function of absorbing and responding to electromagnetic radiation with a wavelength of approximately 730nm. The response may involve a change in conformation.","definition_xrefs":["GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"red or far-red light photoreceptor activity","termid":"GO:0009883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"far-red light photoreceptor activity","termid":"GO:0031516"}


id: PBO:0065822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB5C antisense RNA 1","termid":"PBO:0065822"}


id: PBO:0085598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in calcium homeostasis and exit from quiescence; required for proper trehalose levels during quiescence; may play a role in cell wall biosynthesis, mutants are hypersensitive to antifungal, Papulacandin B; null mutants have increased plasmid loss; interacts with Pdr5p","termid":"PBO:0085598"}


id: GO:0006341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatin insulator sequence binding (obsolete GO:0006341)","synonyms":[{"name":"chromatin insulator sequence binding","type":"exact"}],"termid":"GO:0006341"}


id: PBO:0066687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"relaxin 2","termid":"PBO:0066687"}


id: GO:1900103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endoplasmic reticulum unfolded protein response.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endoplasmic reticulum unfolded protein response","termid":"GO:1900101"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"is_a","term_name":"positive regulation of response to endoplasmic reticulum stress","termid":"GO:1905898"},{"relation_name":"positively_regulates","term_name":"endoplasmic reticulum unfolded protein response","termid":"GO:0030968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of endoplasmic reticulum unfolded protein response","synonyms":[{"name":"activation of ER unfolded protein response","type":"exact"},{"name":"activation of SREBP-mediated signalling pathway","type":"related"},{"name":"activation of endoplasmic reticulum unfolded protein response","type":"narrow"},{"name":"activation of erUPR","type":"exact"},{"name":"positive regulation of ER unfolded protein response","type":"exact"},{"name":"positive regulation of SREBP-mediated signalling pathway","type":"related"},{"name":"positive regulation of erUPR","type":"exact"},{"name":"up regulation of ER unfolded protein response","type":"exact"},{"name":"up regulation of SREBP-mediated signalling pathway","type":"related"},{"name":"up regulation of endoplasmic reticulum unfolded protein response","type":"exact"},{"name":"up regulation of erUPR","type":"exact"},{"name":"up-regulation of ER unfolded protein response","type":"exact"},{"name":"up-regulation of SREBP-mediated signalling pathway","type":"related"},{"name":"up-regulation of endoplasmic reticulum unfolded protein response","type":"exact"},{"name":"up-regulation of erUPR","type":"exact"},{"name":"upregulation of ER unfolded protein response","type":"exact"},{"name":"upregulation of SREBP-mediated signalling pathway","type":"related"},{"name":"upregulation of endoplasmic reticulum unfolded protein response","type":"exact"},{"name":"upregulation of erUPR","type":"exact"}],"termid":"GO:1900103"}


id: PBO:0045620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 32 (pseudogene)","termid":"PBO:0045620"}


id: SO:0000951
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A signal for RNA polymerase to terminate transcription.","direct_ancestors":[{"relation_name":"is_a","term_name":"terminator","termid":"SO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic_terminator","synonyms":[{"name":"eukaryotic terminator","type":"exact"}],"termid":"SO:0000951"}


id: PBO:0047074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 133 member C, pseudogene","termid":"PBO:0047074"}


id: GO:0018047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-phenylalanine amide by hydrolysis and oxidation of an interior Phe-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0094"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-phenylalanine amidation (obsolete GO:0018047)","termid":"GO:0018047"}


id: GO:0019461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of glutamine into fumarate, beginning with the conversion of glutamine to glutamate catalyzed by the enzyme glutamate synthase (NADPH) (EC:1.4.1.13).","definition_xrefs":["GOC:jl","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamine catabolic process to fumarate, using glutamate synthase (NADPH) (obsolete GO:0019461)","synonyms":[{"name":"glutamate catabolic process to fumarate, using glutamate synthase (NADPH)","type":"related"},{"name":"glutamine breakdown to fumarate, using glutamate synthase (NADPH)","type":"exact"},{"name":"glutamine degradation to fumarate, using glutamate synthase (NADPH)","type":"exact"}],"termid":"GO:0019461"}


id: GO:0007568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A developmental process that is a deterioration and loss of function over time. Aging includes loss of functions such as resistance to disease, homeostasis, and fertility, as well as wear and tear. Aging includes cellular senescence, but is more inclusive. May precede death and may succeed developmental maturation (GO:0021700).","definition_xrefs":["GOC:PO_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete aging (obsolete GO:0007568)","synonyms":[{"name":"ageing","type":"exact"}],"termid":"GO:0007568"}


id: GO:0001815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of antibody-dependent cellular cytotoxicity.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of type IIa hypersensitivity","termid":"GO:0001798"},{"relation_name":"is_a","term_name":"regulation of antibody-dependent cellular cytotoxicity","termid":"GO:0001813"},{"relation_name":"is_a","term_name":"positive regulation of leukocyte mediated cytotoxicity","termid":"GO:0001912"},{"relation_name":"positively_regulates","term_name":"antibody-dependent cellular cytotoxicity","termid":"GO:0001788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antibody-dependent cellular cytotoxicity","synonyms":[{"name":"activation of antibody-dependent cellular cytotoxicity","type":"narrow"},{"name":"positive regulation of antibody dependent cell death","type":"exact"},{"name":"positive regulation of antibody dependent cell killing","type":"exact"},{"name":"positive regulation of antibody-dependent cell death","type":"exact"},{"name":"positive regulation of antibody-dependent cell killing","type":"exact"},{"name":"stimulation of antibody-dependent cellular cytotoxicity","type":"narrow"},{"name":"up regulation of antibody-dependent cellular cytotoxicity","type":"exact"},{"name":"up-regulation of antibody-dependent cellular cytotoxicity","type":"exact"},{"name":"upregulation of antibody-dependent cellular cytotoxicity","type":"exact"}],"termid":"GO:0001815"}


id: PBO:0074818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 18A","termid":"PBO:0074818"}


id: GO:0032867
data:
  {"annotated_genes":["SJAG_03958","SJAG_04660"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91817,97241],"is_not":false,"summary":null,"term":"GO:0032867"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arabitol + NADP+ = L-arabinose + NADPH + H+.","definition_xrefs":["PMID:15184173","RHEA:25229","PMID:12724380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldose reductase (NADPH) activity","termid":"GO:0004032"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03958":null,"SJAG_04660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"L-arabinose reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R01759","MetaCyc:RXN-8772","SABIO-RK:1858"],"synonyms":[{"name":"L-arabinose:NADP reductase activity","type":"exact"},{"name":"arabinose reductase activity","type":"broad"},{"name":"arabinose:NADP reductase activity","type":"broad"}],"termid":"GO:0032867","terms_by_termid":{"GO:0032867":null}}


id: PBO:0051370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3D-20","termid":"PBO:0051370"}


id: PBO:0050384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3 pseudogene 8","termid":"PBO:0050384"}


id: PBO:0047879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(4)(p15)","termid":"PBO:0047879"}


id: FYPO:0001634
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of tryptophan measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in vacuole","termid":"FYPO:0001603"},{"relation_name":"is_a","term_name":"normal cellular tryptophan level","termid":"FYPO:0001643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal vacuolar tryptophan level","synonyms":[{"name":"normal level of tryptophan in vacuole","type":"exact"},{"name":"normal vacuolar tryptophan level during mitotic cell cycle","type":"related"},{"name":"normal vacuolar tryptophan level during vegetative growth","type":"exact"}],"termid":"FYPO:0001634"}


id: PBO:0048498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ganglioside induced differentiation associated protein 1 like 1","termid":"PBO:0048498"}


id: PBO:0108557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Esf1","termid":"PBO:0108557"}


id: PBO:0053612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 648","termid":"PBO:0053612"}


id: PBO:0044825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 112","termid":"PBO:0044825"}


id: GO:0005924
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An adherens junction which connects a cell to the extracellular matrix.","definition_xrefs":["GOC:hb"],"gene_count":0,"genotype_count":0,"name":"obsolete cell-substrate adherens junction (obsolete GO:0005924)","synonyms":[{"name":"hemi-adherens junction","type":"related"}],"termid":"GO:0005924"}


id: PBO:0039730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein C1 pseudogene 1","termid":"PBO:0039730"}


id: PBO:0090421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane chaperone for multipass membrane proteins, PAT complex subunit, and TMCO1 translocon subunit (human CCDC47 ortholog)","termid":"PBO:0090421"}


id: GO:0051425
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a phosphotyrosine-binding (PTB) Binding to a phosphotyrosine-bindin domain.","definition_xrefs":["Pfam:PF02174","PMID:15924411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"PTB domain binding","synonyms":[{"name":"PID binding","type":"broad"},{"name":"phosphotyrosine-interacting domain binding","type":"exact"}],"termid":"GO:0051425"}


id: PBO:0042291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD3 delta subunit of T-cell receptor complex","termid":"PBO:0042291"}


id: PBO:0069062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 309, pseudogene","termid":"PBO:0069062"}


id: PBO:0070532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 31","termid":"PBO:0070532"}


id: FYPO:0002252
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains a single septum, has one nucleus, is elongated, and is inviable. The septum is in an abnormal location, and the nucleus is located in one compartment of the septated cell. The cell compartment containing the nucleus is swollen (i.e. has a larger diameter and volume than the other compartment).","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"normal septum location","termid":"FYPO:0002253"},{"relation_name":"is_a","term_name":"inviable elongated mononucleate monoseptate vegetative cell","termid":"FYPO:0001917"},{"relation_name":"is_a","term_name":"inviable swollen mononucleate monoseptate vegetative cell","termid":"FYPO:0002103"},{"relation_name":"is_a","term_name":"normal septum location","termid":"FYPO:0002253"},{"relation_name":"is_a","term_name":"inviable swollen elongated septated vegetative cell","termid":"FYPO:0002845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000337","FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0000641","FYPO:0000005","FYPO:0000004","FYPO:0000257"],"is_obsolete":false,"name":"inviable swollen elongated mononucleate vegetative cell with normally localized septum","synonyms":[{"name":"inviable elongated mononucleate vegetative cell with normally localized septum with increased cell volume","type":"exact"},{"name":"inviable enlarged elongated mononucleate vegetative cell with normally localized septum","type":"related"},{"name":"inviable large elongated mononucleate vegetative cell with normally localized septum","type":"related"},{"name":"inviable swollen elongated mononucleate vegetative cell with normally localised septum","type":"exact"},{"name":"inviable swollen elongated mononucleate vegetative cell with normally localized septum during mitotic cell cycle","type":"related"},{"name":"inviable swollen elongated mononucleate vegetative cell with normally positioned septum","type":"exact"},{"name":"lethal; swollen elongated mononucleate vegetative cell with normally localized septum","type":"exact"},{"name":"long swollen mononucleate cell with normally localized septum","type":"exact"},{"name":"swollen elongated mononucleate cell with normal septum position","type":"narrow"},{"name":"swollen elongated mononucleate cell with normally localized septum near new end during vegetative growth","type":"exact"},{"name":"swollen elongated mononucleate cell with normally placed septum","type":"exact"}],"termid":"FYPO:0002252"}


id: PBO:0088184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc-finger DNA-binding transcription factor; involved in transcriptional regulation of the methionine biosynthetic genes; targets strong transcriptional activator Met4p to promoters of sulfur metabolic genes; feedforward loop exists in the regulation of genes controlled by Met4p and Met32p; lack of such a loop for MET31 may account for the differential actions of Met32p and Met31p; MET32 has a paralog, MET31, that arose from the whole genome duplication","termid":"PBO:0088184"}


id: PBO:0082393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of C-terminal domain kinase I (CTDK-I); which phosphorylates both RNA pol II subunit Rpo21p to affect transcription and pre-mRNA 3' end processing, and ribosomal protein Rps2p to increase translational fidelity; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0082393"}


id: GO:0036277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an anticonvulsant stimulus, a drug used to prevent seizures or reduce their severity.","definition_xrefs":["GOC:hp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to anticonvulsant","termid":"GO:0036277"}


id: PR:O14143
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3G6.07 gene.","definition_xrefs":["UniProtKB:O14143","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3G6.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G6.07","synonyms":[{"name":"Spom972h-SPAC3G6.07","type":"exact"}],"termid":"PR:O14143"}


id: MOD:01419
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by condensation of a serine or threonine hydroxyl with the carbonyl of the preceding residue to form an oxazole or oxazoline ring, or by rearrangement and condensation of a cysteine with the carbonyl of the preceding residue to form a 1,3-oxazole-4-carbothionic acid.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole/thiazole ring crosslinked residues","termid":"MOD:00690"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxazole/oxazoline ring crosslinked residues","termid":"MOD:01419"}


id: PR:Q9P7I9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transmembrane emp24 domain-containing protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosomal protein P24B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.17","secondary_identifiers":["UniProtKB:Q9P7I9"],"synonyms":[{"name":"Spom972h-TMED2","type":"exact"}],"termid":"PR:Q9P7I9"}


id: SO:0000758
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA synthesized from RNA by reverse transcriptase that has been copied by PCR to make it double stranded.","direct_ancestors":[{"relation_name":"is_a","term_name":"cDNA","termid":"SO:0000756"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double_stranded_cDNA","synonyms":[{"name":"double strand cDNA","type":"related"},{"name":"double stranded cDNA","type":"exact"},{"name":"double-strand cDNA","type":"related"}],"termid":"SO:0000758"}


id: PBO:0091938
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Latrunculin Sensitive Gamma subunit","termid":"PBO:0091938"}


id: PBO:0079887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroplakin 3B pseudogene 1","termid":"PBO:0079887"}


id: GO:0034557
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxylaminobenzoate + NAD(P)H = anthranilate + NAD(P)+ + H2O.","definition_xrefs":["MetaCyc:RXN-8848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2-hydroxylaminobenzoate reductase activity","secondary_identifiers":["UM-BBD_reactionID:r0850"],"synonyms":[{"name":"o-hydroxylaminobenzoate nitroreductase activity","type":"related"}],"termid":"GO:0034557"}


id: FYPO:0007221
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 18 of histone H3 in regions containing protein-coding genes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:31260531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone acetylation during vegetative growth","termid":"FYPO:0003221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal histone H3-K18 acetylation at protein coding gene during vegetative growth","synonyms":[{"name":"normal histone H3-K18 acetylation at protein coding gene during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K18 acetylation at protein-coding gene during vegetative growth","type":"exact"},{"name":"normal histone H3K18 acetylation at protein coding gene during vegetative growth","type":"exact"}],"termid":"FYPO:0007221"}


id: GO:0016899
data:
  {"annotated_genes":["SJAG_00265"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003885"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces an oxygen molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.1.3.-"],"termid":"GO:0016899","terms_by_termid":{"GO:0003885":null}}


id: PBO:0064595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 2 homeobox associating factor 1","termid":"PBO:0064595"}


id: FYPO:0001517
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of aluminium ions than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"resistance to aluminium","synonyms":[{"name":"resistance to aluminium cation","type":"exact"},{"name":"resistance to aluminium during mitotic cell cycle","type":"related"},{"name":"resistance to aluminium during vegetative growth","type":"exact"},{"name":"resistance to aluminium ions","type":"exact"},{"name":"resistance to aluminum","type":"exact"},{"name":"resistant to aluminium","type":"exact"}],"termid":"FYPO:0001517"}


id: GO:0072056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the kidney pyramids over time, from its formation to the mature structure. Kidney pyramids are the conical masses that constitute the renal medulla in a multi-lobed mammalian kidney; they contain the loops of Henle and the medullary collecting ducts.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pyramid development","synonyms":[{"name":"kidney pyramid development","type":"exact"},{"name":"pyramids development","type":"exact"},{"name":"renal medulla development","type":"exact"},{"name":"renal pyramid development","type":"exact"}],"termid":"GO:0072056"}


id: GO:0048246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a macrophage in response to an external stimulus.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte chemotaxis","termid":"GO:0030595"},{"relation_name":"is_a","term_name":"macrophage migration","termid":"GO:1905517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macrophage chemotaxis","termid":"GO:0048246"}


id: PBO:0040950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 21","termid":"PBO:0040950"}


id: PBO:0059438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A7","termid":"PBO:0059438"}


id: PBO:0081526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 436","termid":"PBO:0081526"}


id: GO:1902967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a mitotic spindle midzone.","definition_xrefs":["PMID:16824200","GOC:TermGenie","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to mitotic spindle","termid":"GO:1902480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to mitotic spindle midzone","synonyms":[{"name":"protein localisation in mitotic spindle midzone","type":"exact"},{"name":"protein localisation to mitotic spindle midzone","type":"exact"},{"name":"protein localization in mitotic spindle midzone","type":"exact"}],"termid":"GO:1902967"}


id: PR:Q10233
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase III subunit RPC2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00937","PANTHER:PTHR20856:SF8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III subunit RPC2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.08c","secondary_identifiers":["UniProtKB:Q10233"],"synonyms":[{"name":"C128 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DNA-directed RNA polymerase III 130 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RPC130 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR3B","type":"exact"}],"termid":"PR:Q10233"}


id: PBO:0086818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YML119W is not an essential gene; potential Cdc28p substrate","termid":"PBO:0086818"}


id: PR:Q76PC7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mti3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q76PC7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18E5.13","synonyms":[{"name":"Spom972h-mti3","type":"exact"}],"termid":"PR:Q76PC7"}


id: PR:P17478
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpp202 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P17478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein P2-beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23G7.15c","synonyms":[{"name":"A4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpp202","type":"exact"}],"termid":"PR:P17478"}


id: PATO:0001166
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001166 urine enzyme composition (obsolete PATO:0001166)","termid":"PATO:0001166"}


id: GO:0042388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of gibberellic acid and dependent on the coupling of the alpha subunit of G proteins to the hormone receptors.","definition_xrefs":["PMID:11027362","GOC:pj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gibberellic acid mediated signaling pathway","termid":"GO:0009740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"gibberellic acid mediated signaling pathway, G-alpha-dependent","synonyms":[{"name":"gibberellic acid mediated signalling, G-alpha-dependent","type":"exact"}],"termid":"GO:0042388"}


id: GO:0017028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Strengthening of a bond between proteins. Proteins are large molecules composed of one or more chains of amino acids. The amino acids are joined in a specific order by peptide bonds.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete protein stabilization activity (obsolete GO:0017028)","synonyms":[{"name":"protein stabilization activity","type":"exact"}],"termid":"GO:0017028"}


id: PBO:0110325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR2 pseudogene 1","termid":"PBO:0110325"}


id: PBO:0088640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved endomembrane protein, RGS domain, implicated in signal transduction, cell polarity, possibly via membrane tethering","termid":"PBO:0088640"}


id: PBO:0065791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H domain and coiled-coil containing 1 like","termid":"PBO:0065791"}


id: PR:O74499
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U6 snRNA-associated Sm-like protein LSm7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04840","PANTHER:PTHR10553:SF1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNA-associated Sm-like protein LSm7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC285.12","secondary_identifiers":["UniProtKB:O74499"],"synonyms":[{"name":"Spom972h-LSM7","type":"exact"}],"termid":"PR:O74499"}


id: GO:1905796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intraciliary anterograde transport.","definition_xrefs":["GO_REF:0000058","PMID:27930654","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of microtubule-based movement","termid":"GO:0060632"},{"relation_name":"regulates","term_name":"intraciliary anterograde transport","termid":"GO:0035720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of intraciliary anterograde transport","synonyms":[{"name":"regulation of intraflagellar anterograde transport","type":"exact"}],"termid":"GO:1905796"}


id: PR:Q9P7C0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U3 small nucleolar RNA-interacting protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01388","PANTHER:PTHR19865:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C2E1P5.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2E1P5.05","secondary_identifiers":["UniProtKB:Q9P7C0"],"synonyms":[{"name":"Spom972h-RRP9","type":"exact"}],"termid":"PR:Q9P7C0"}


id: GO:0097099
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of albumen (also called egg white). Albumen is the clear liquid contained within an egg and consists of water and proteins, among which are ovomucin and ovomucoid. It protects the egg yolk and provides additional nutrition for the growth of the embryo.","definition_xrefs":["Wikipedia:Albumen","GOC:jj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of albumen","synonyms":[{"name":"structural constituent of egg white","type":"exact"}],"termid":"GO:0097099"}


id: PBO:0111846
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-ranBP","termid":"PBO:0111846"}


id: PATO:0002091
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's having an onset and time course between acute and chronic.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duration","termid":"PATO:0001309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subacute","termid":"PATO:0002091"}


id: PATO:0000168
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000168 relative time (obsolete PATO:0000168)","termid":"PATO:0000168"}


id: SO:0001412
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA region within which self-interaction occurs more often than expected by chance because of DNA-looping.","definition_xrefs":["SO:cb","PMID:32782014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"region","termid":"SO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"topologically_defined_region","synonyms":[{"name":"topologically defined region","type":"exact"}],"termid":"SO:0001412"}


id: FYPO:0007663
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the kinetochore of a chromosome does not occur during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:11331883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to kinetochore during meiosis","termid":"FYPO:0004762"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to kinetochore during meiosis II","synonyms":[{"name":"abolished protein localisation to kinetochore during meiosis II","type":"exact"},{"name":"abolished protein localisation to kinetochore during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0007663"}


id: GO:0051630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of acetylcholine into a cell, typically presynaptic neurons or glial cells. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylcholine transport","termid":"GO:0015870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"acetylcholine uptake","synonyms":[{"name":"acetylcholine import","type":"exact"}],"termid":"GO:0051630"}


id: PBO:0112996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor; GTPase of the Ras superfamily that regulates coated vesicle formation during intracellular trafficking within the Golgi; regulates mitochondrial fission, fusion and function, controlling the flow of fatty acids and metabolites from lipid droplets to peroxisomes and mitochondria; localizes to the Golgi apparatus and the active form to ER and lipid droplets; arf1 arf2 double null mutation is complemented by human ARF1, ARF4, ARF5, or ARF6","termid":"PBO:0112996"}


id: GO:0002299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of an alpha-beta intraepithelial T cell. Intraepithelial T cells are found among epithelial cells in mucosal areas and have distinct phenotypes and developmental pathways.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta T cell differentiation","termid":"GO:0046632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alpha-beta intraepithelial T cell differentiation","synonyms":[{"name":"alpha-beta intraepithelial T cell development","type":"related"},{"name":"alpha-beta intraepithelial T lymphocyte differentiation","type":"exact"},{"name":"alpha-beta intraepithelial T-cell differentiation","type":"exact"},{"name":"alpha-beta intraepithelial T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002299"}


id: GO:0102673
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a fatty aldehyde + H2O + NAD+ = a fatty acid + 2 H+ + NADH.","definition_xrefs":["RHEA:49832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"fatty aldehyde dehydrogenase (NAD+) activity","secondary_identifiers":["MetaCyc:RXN-4142"],"synonyms":[{"name":"fatty aldehyde dehydrogenase activity","type":"exact"}],"termid":"GO:0102673"}


id: GO:1903459
data:
  {"annotated_genes":["SJAG_02818","SJAG_04877","SJAG_05197","SJAG_03495","SJAG_04190","SJAG_00814"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91297,98892,100290,100977,105163,114244],"is_not":false,"summary":null,"term":"GO:1903459"}]},"cv_name":"biological_process","definition":"Any lagging strand elongation that is involved in mitotic cell cycle DNA replication.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie","GO_REF:0000060","PMID:1234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lagging strand elongation","termid":"GO:0006273"},{"relation_name":"is_a","term_name":"DNA strand elongation involved in mitotic DNA replication","termid":"GO:1902983"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00814":null,"SJAG_02818":null,"SJAG_03495":null,"SJAG_04190":null,"SJAG_04877":null,"SJAG_05197":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"mitotic DNA replication lagging strand elongation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"lagging strand elongation involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"lagging strand elongation involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"lagging strand elongation involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"lagging strand elongation involved in mitotic DNA replication","type":"exact"},{"name":"lagging strand elongation involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"lagging strand elongation involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"}],"termid":"GO:1903459","terms_by_termid":{"GO:1903459":null}}


id: PBO:0082274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Anchorage subunit of a-agglutinin of a-cells; highly O-glycosylated protein with N-terminal secretion signal and C-terminal signal for addition of GPI anchor to cell wall, linked to adhesion subunit Aga2p via two disulfide bonds; AGA1 has a paralog, FIG2, that arose from the whole genome duplication","termid":"PBO:0082274"}


id: FYPO:0000712
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of cell cycle arrest in response to nitrogen starvation occurs in G1 phase, but begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","termid":"FYPO:0000711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000298","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"delayed onset of cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","synonyms":[{"name":"delayed cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","type":"exact"},{"name":"delayed onset of cell cycle arrest in mitotic G1 phase during cellular response to nitrogen starvation","type":"exact"},{"name":"delayed onset of cell cycle arrest in mitotic G1 phase in response to nitrogen depletion","type":"exact"},{"name":"delayed onset of cell cycle arrest in mitotic G1 phase in response to nitrogen deprivation","type":"exact"},{"name":"delayed onset of mitotic G1 arrest in response to nitrogen starvation","type":"exact"},{"name":"delayed onset of mitotic cell cycle arrest in G1 phase in response to nitrogen starvation","type":"exact"},{"name":"delayed onset of nitrogen deprivation-induced G1 arrest","type":"exact"}],"termid":"FYPO:0000712"}


id: PBO:0038922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor G4","termid":"PBO:0038922"}


id: PBO:0031730
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_meiosis","termid":"PBO:0031730"}


id: GO:0045643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of eosinophil differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of granulocyte differentiation","termid":"GO:0030852"},{"relation_name":"regulates","term_name":"eosinophil differentiation","termid":"GO:0030222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of eosinophil differentiation","termid":"GO:0045643"}


id: PBO:0054151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1518","termid":"PBO:0054151"}


id: GO:0035297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Ensuring that the Malpighian tubule is the correct width. Malpighian tubules have a uniform circumference along their length; the circumference of the tubes is eight cells during the time the cells are dividing, after which the cells rearrange producing tubes with a cirumference of two cells.","definition_xrefs":["PMID:9286684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tube diameter","termid":"GO:0035296"},{"relation_name":"is_a","term_name":"regulation of Malpighian tubule size","termid":"GO:0035298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of Malpighian tubule diameter","termid":"GO:0035297"}


id: PBO:0031149
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_polysaccharide_level","termid":"PBO:0031149"}


id: GO:0034408
data:
  {"annotated_genes":["SJAG_04666","SJAG_04483","SJAG_03587","SJAG_04771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[105350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[88468,83594],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140748"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-glucans, compounds composed of glucose residues linked by beta-D-glucosidic bonds, found in the walls of ascospores.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal-type cell wall beta-glucan metabolic process","termid":"GO:0070879"},{"relation_name":"part_of","term_name":"ascospore wall biogenesis","termid":"GO:0070591"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03587":null,"SJAG_04483":null,"SJAG_04666":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0030437"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0030437","GO:0007049","GO:0005975","GO:0044085","GO:0008150","GO:0071554"],"is_obsolete":false,"name":"ascospore wall beta-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ascospore wall beta-glucan metabolism","type":"exact"}],"termid":"GO:0034408","terms_by_termid":{"GO:0034412":null,"GO:0034413":null,"GO:0140748":null}}


id: PBO:0041497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 12 open reading frame 57","termid":"PBO:0041497"}


id: PBO:0055835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat and fibronectin type III domain containing 5","termid":"PBO:0055835"}


id: GO:0070136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-1,2-linked oligomannosides, which are found in fungal cell wall phosphopeptidomannan and phospholipomannan.","definition_xrefs":["PMID:18234669","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannan biosynthetic process","termid":"GO:0046354"},{"relation_name":"is_a","term_name":"fungal-type cell wall polysaccharide biosynthetic process","termid":"GO:0051278"},{"relation_name":"is_a","term_name":"beta-1,2-oligomannoside metabolic process","termid":"GO:0070135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044085","GO:0005975","GO:0071554","GO:0008150"],"is_obsolete":false,"name":"beta-1,2-oligomannoside biosynthetic process","synonyms":[{"name":"beta-1,2-oligomannoside anabolism","type":"exact"},{"name":"beta-1,2-oligomannoside biosynthesis","type":"exact"},{"name":"beta-1,2-oligomannoside formation","type":"exact"},{"name":"beta-1,2-oligomannoside synthesis","type":"exact"}],"termid":"GO:0070136"}


id: GO:0065003
data:
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id: PBO:0059130
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id: GO:1990225
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id: PBO:0029224
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id: GO:0051886
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id: PBO:0048406
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id: PBO:0050268
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id: PBO:0070676
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id: PBO:0077904
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id: PBO:0050987
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id: PBO:0084564
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id: GO:0033645
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collection of membranous structures involved in transport within the host cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell endomembrane system","termid":"GO:0033645"}


id: GO:0031652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of heat generation.","definition_xrefs":["GOC:mah","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heat generation","termid":"GO:0031650"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"heat generation","termid":"GO:0031649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heat generation","synonyms":[{"name":"activation of heat generation","type":"narrow"},{"name":"stimulation of heat generation","type":"narrow"},{"name":"up regulation of heat generation","type":"exact"},{"name":"up-regulation of heat generation","type":"exact"},{"name":"upregulation of heat generation","type":"exact"}],"termid":"GO:0031652"}


id: PR:O14140
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S proteasome complex subunit DSS1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR16771:SF0","OMA:SCHPO02235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA export factor dss1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G6.02","secondary_identifiers":["UniProtKB:O14140"],"synonyms":[{"name":"Spom972h-SHFM1","type":"exact"}],"termid":"PR:O14140"}


id: PBO:0029039
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_glycerol_level","termid":"PBO:0029039"}


id: GO:1902859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of propionyl-CoA.","definition_xrefs":["GOC:mengo_curators","PMID:15514053","GO_REF:0000068","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA catabolic process","termid":"GO:0036115"},{"relation_name":"is_a","term_name":"propionyl-CoA metabolic process","termid":"GO:1902858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0006629","GO:0008150","GO:0006790","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"propionyl-CoA catabolic process","synonyms":[{"name":"propionyl-CoA breakdown","type":"exact"},{"name":"propionyl-CoA catabolism","type":"exact"},{"name":"propionyl-CoA degradation","type":"exact"}],"termid":"GO:1902859"}


id: GO:0140677
data:
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id: PBO:0058640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6770-2","termid":"PBO:0058640"}


id: GO:0030213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hyaluronan, the naturally occurring anionic form of hyaluronic acid, any member of a group of glycosaminoglycans, the repeat units of which consist of beta-1,4 linked D-glucuronyl-beta-(1,3)-N-acetyl-D-glucosamine.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan biosynthetic process","termid":"GO:0006024"},{"relation_name":"is_a","term_name":"hyaluronan metabolic process","termid":"GO:0030212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hyaluronan biosynthetic process","synonyms":[{"name":"hyaluronan anabolism","type":"exact"},{"name":"hyaluronan biosynthesis","type":"exact"},{"name":"hyaluronan formation","type":"exact"},{"name":"hyaluronan synthesis","type":"exact"}],"termid":"GO:0030213"}


id: GO:0106075
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the acetylation of an amino acid residue of a peptide or protein, according to the reaction: succinyl-CoA + peptide = CoA + N-succinylpeptide.","definition_xrefs":["PMID:29211711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"peptide N-succinyltransferase activity","termid":"GO:0106075"}


id: PR:Q10367
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- glo3 gene.","definition_xrefs":["UniProtKB:Q10367","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor GTPase-activating protein glo3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.17c","synonyms":[{"name":"ARF GAP glo3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-glo3","type":"exact"}],"termid":"PR:Q10367"}


id: PBO:0062233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily B member 15 pseudogene","termid":"PBO:0062233"}


id: GO:0033798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,3',5'-triiodo-L-thyronine + iodide + A + H+ = L-thyroxine + AH2.","definition_xrefs":["EC:1.21.99.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"thyroxine 5-deiodinase activity","secondary_identifiers":["RHEA:18897","MetaCyc:1.97.1.11-RXN"],"synonyms":[{"name":"acceptor:3,3',5'-triiodo-L-thyronine oxidoreductase (iodinating) activity","type":"related"},{"name":"diiodothyronine 5'-deiodinase activity","type":"broad"},{"name":"inner ring-deiodinating pathway","type":"exact"},{"name":"iodothyronine 5-deiodinase activity","type":"related"},{"name":"iodothyronine inner ring monodeiodinase activity","type":"related"},{"name":"type III iodothyronine deiodinase activity","type":"narrow"}],"termid":"GO:0033798"}


id: GO:0033087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of immature T cell proliferation.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immature T cell proliferation","termid":"GO:0033083"},{"relation_name":"is_a","term_name":"negative regulation of T cell proliferation","termid":"GO:0042130"},{"relation_name":"negatively_regulates","term_name":"immature T cell proliferation","termid":"GO:0033079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of immature T cell proliferation","termid":"GO:0033087"}


id: GO:1904464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of matrix metallopeptidase secretion.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:8679543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein secretion","termid":"GO:0050708"},{"relation_name":"regulates","term_name":"matrix metallopeptidase secretion","termid":"GO:1990773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of matrix metallopeptidase secretion","synonyms":[{"name":"regulation of MMP secretion","type":"exact"},{"name":"regulation of matrix metalloproteinase secretion","type":"narrow"}],"termid":"GO:1904464"}


id: GO:0035776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the pronephric proximal tubule over time, from its formation to the mature structure. A pronephric nephron tubule is an epithelial tube that is part of the pronephros.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:yaf","PMID:18787069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pronephric nephron tubule development","termid":"GO:0039020"},{"relation_name":"is_a","term_name":"proximal tubule development","termid":"GO:0072014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric proximal tubule development","termid":"GO:0035776"}


id: PATO:0001102
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001102 absolute stiffness value (obsolete PATO:0001102)","termid":"PATO:0001102"}


id: PBO:0066998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA component of signal recognition particle 7SL2","termid":"PBO:0066998"}


id: PBO:0063093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPARG activating RBM14 associated lncRNA 1","termid":"PBO:0063093"}


id: GO:1901647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of synoviocyte proliferation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation","termid":"GO:0050679"},{"relation_name":"is_a","term_name":"regulation of synoviocyte proliferation","termid":"GO:1901645"},{"relation_name":"positively_regulates","term_name":"synoviocyte proliferation","termid":"GO:0002941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of synoviocyte proliferation","synonyms":[{"name":"activation of synoviocyte proliferation","type":"narrow"},{"name":"up regulation of synoviocyte proliferation","type":"exact"},{"name":"up-regulation of synoviocyte proliferation","type":"exact"},{"name":"upregulation of synoviocyte proliferation","type":"exact"}],"termid":"GO:1901647"}


id: FYPO:0005740
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a normal (i.e. indistinguishable from wild type) extent during a cellular response to heat. All genes, or a specific subset of genes, may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription during vegetative growth","termid":"FYPO:0001855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal transcription during cellular response to heat","synonyms":[{"name":"normal global transcription during vegetative growth in response to heat stress","type":"exact"},{"name":"normal transcription during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"normal transcription during cellular response to heat during vegetative growth","type":"exact"},{"name":"normal transcription during cellular response to heat stress","type":"exact"}],"termid":"FYPO:0005740"}


id: GO:0071608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of macrophage inflammatory protein 1 alpha due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"macrophage inflammatory protein-1 alpha production","synonyms":[{"name":"CCL3 production","type":"exact"},{"name":"MIP-1a production","type":"exact"},{"name":"chemokine (C-C motif) ligand 3 production","type":"exact"},{"name":"macrophage inflammatory protein production","type":"broad"}],"termid":"GO:0071608"}


id: FYPO:0000429
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the G0 to G1 transition begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal G0 to G1 transition","termid":"FYPO:0002955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"delayed G0 to G1 transition","synonyms":[{"name":"delayed G0/G1 transition","type":"exact"},{"name":"delayed exit from G0","type":"exact"},{"name":"delayed exit from cell quiescence","type":"exact"},{"name":"slow cell population growth following nitrogen starvation","type":"related"}],"termid":"FYPO:0000429"}


id: GO:0031614
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The subunits that form the peripheral lid of the regulatory particle of a proteasome located in the endoplasmic reticulum of a cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ER proteasome regulatory particle, lid subcomplex (obsolete GO:0031614)","termid":"GO:0031614"}


id: PBO:0041637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel subunit alpha1 D","termid":"PBO:0041637"}


id: GO:0098991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by glutamate binding to an kainate-selective glutamate receptor on the surface of the target cell, followed by the movement of ions through a channel in the receptor complex, ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["ISBN:9780071120005","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ionotropic glutamate receptor signaling pathway","termid":"GO:0035235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"kainate selective glutamate receptor signaling pathway","termid":"GO:0098991"}


id: GO:0017171
data:
  {"annotated_genes":["SJAG_03760","SJAG_04398","SJAG_00975","SJAG_03261","SJAG_03910","SJAG_02565","SJAG_00984","SJAG_01136","SJAG_02432","SJAG_04928","SJAG_05286","SJAG_01868","SJAG_01285","SJAG_02809","SJAG_04819","SJAG_03258","SJAG_04785","SJAG_03648","SJAG_00737","SJAG_03121"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89079],"is_not":false,"summary":null,"term":"GO:0017171"},{"annotations":[100449,84280,87870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004185"},{"annotations":[99883,105247,89326,99141,90222,97351,100884,109476,99890,104132,93700,114505,87659,89232,83556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004252"},{"annotations":[85204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008236"},{"annotations":[97352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008240"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a substrate by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).","definition_xrefs":["Wikipedia:Serine_hydrolase"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_00975":null,"SJAG_00984":null,"SJAG_01136":null,"SJAG_01285":null,"SJAG_01868":null,"SJAG_02432":null,"SJAG_02565":null,"SJAG_02809":null,"SJAG_03121":null,"SJAG_03258":null,"SJAG_03261":null,"SJAG_03648":null,"SJAG_03760":null,"SJAG_03910":null,"SJAG_04398":null,"SJAG_04785":null,"SJAG_04819":null,"SJAG_04928":null,"SJAG_05286":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"serine hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0017171","terms_by_termid":{"GO:0004185":null,"GO:0004252":null,"GO:0008236":null,"GO:0008240":null,"GO:0017171":null}}


id: PBO:0072608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal L24 domain containing 1 pseudogene 3","termid":"PBO:0072608"}


id: PBO:0051025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor binding protein 5","termid":"PBO:0051025"}


id: GO:0042798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Covalent attachment of the ubiquitin-like protein NEDD8 (or equivalent protein) to another protein, as a part of NEDD8-dependant protein catabolism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete protein neddylation during NEDD8 class-dependent protein catabolic process (obsolete GO:0042798)","synonyms":[{"name":"protein neddylation during NEDD8 class-dependent protein breakdown","type":"exact"},{"name":"protein neddylation during NEDD8 class-dependent protein catabolic process","type":"exact"},{"name":"protein neddylation during NEDD8 class-dependent protein catabolism","type":"exact"},{"name":"protein neddylation during NEDD8 class-dependent protein degradation","type":"exact"},{"name":"protein neddylation during RUB1-dependent protein catabolic process","type":"exact"},{"name":"protein neddylation during RUB1-dependent protein catabolism","type":"exact"}],"termid":"GO:0042798"}


id: GO:0038037
data:
  {"annotated_genes":["SJAG_01978"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0038038"}]},"cv_name":"cellular_component","definition":"A protein complex that contains two G protein-coupled receptors.","definition_xrefs":["GOC:bf","GOC:al","PMID:10713101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor complex","termid":"GO:0097648"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"G protein-coupled receptor dimeric complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"G-protein coupled receptor dimer","type":"exact"},{"name":"G-protein coupled receptor dimeric complex","type":"exact"},{"name":"GPCR dimer","type":"exact"}],"termid":"GO:0038037","terms_by_termid":{"GO:0038038":null}}


id: PBO:0113207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial fission factor (mitofissin) essential for mitophagy; required for Dmn1p-mediated mitochondrial fission; directly binds to lipid membranes and brings about lipid membrane fragility to facilitate membrane fission; S. pombe homolog complements null mutant","termid":"PBO:0113207"}


id: PBO:0084844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; has similarity to E. coli L7/L12 and human MRPL7 ribosomal proteins; associates with the mitochondrial nucleoid; required for normal respiratory growth","termid":"PBO:0084844"}


id: PBO:0057916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3619","termid":"PBO:0057916"}


id: PBO:0003490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein Mis12","termid":"PBO:0003490"}


id: PBO:0055251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2678","termid":"PBO:0055251"}


id: GO:0060416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a growth hormone stimulus. Growth hormone is a peptide hormone that binds to the growth hormone receptor and stimulates growth.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to peptide hormone","termid":"GO:0043434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to growth hormone","synonyms":[{"name":"response to growth hormone stimulus","type":"exact"}],"termid":"GO:0060416"}


id: GO:1901177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lycopene.","definition_xrefs":["UniPathway:UPA00803","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotene biosynthetic process","termid":"GO:0016120"},{"relation_name":"is_a","term_name":"lycopene metabolic process","termid":"GO:1901175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lycopene biosynthetic process","synonyms":[{"name":"lycopene anabolism","type":"exact"},{"name":"lycopene biosynthesis","type":"exact"},{"name":"lycopene formation","type":"exact"},{"name":"lycopene synthesis","type":"exact"}],"termid":"GO:1901177"}


id: PBO:0031378
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiosis","termid":"PBO:0031378"}


id: PBO:0071652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 16","termid":"PBO:0071652"}


id: PBO:0053671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 852","termid":"PBO:0053671"}


id: GO:0033380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the protease granzyme B is transported to, or maintained in, a location within a secretory granule in a T cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protease localization to T cell secretory granule","termid":"GO:0033375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"granzyme B localization to T cell secretory granule","synonyms":[{"name":"granzyme B localisation in T cell secretory granule","type":"exact"},{"name":"granzyme B localization in T cell secretory granule","type":"exact"},{"name":"granzyme B localization in T lymphocyte secretory granule","type":"exact"},{"name":"granzyme B localization in T-cell secretory granule","type":"exact"},{"name":"granzyme B localization in T-lymphocyte secretory granule","type":"exact"}],"termid":"GO:0033380"}


id: GO:0100010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any prostaglandin biosynthetic process process that positively_regulates fever generation.","definition_xrefs":["GOC:cjm","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fever generation by prostaglandin biosynthetic process","termid":"GO:0100008"},{"relation_name":"positively_regulates","term_name":"fever generation","termid":"GO:0001660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of fever generation by prostaglandin biosynthetic process","termid":"GO:0100010"}


id: FYPO:0005201
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to heat stress is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic cell cycle regulation during cellular response to heat stress","synonyms":[{"name":"abnormal cell cycle regulation during cellular response to heat stress","type":"exact"},{"name":"abnormal cell cycle regulation during cellular response to heat stress during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to heat stress during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle regulation in response to heat stress","type":"exact"}],"termid":"FYPO:0005201"}


id: PBO:0060166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-methyltetrahydrofolate-homocysteine methyltransferase reductase","termid":"PBO:0060166"}


id: PBO:0028495
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_degradation_via_N-end_rule_pathway_during_vegetative_growth","termid":"PBO:0028495"}


id: PBO:0011962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"other","termid":"PBO:0011962"}


id: PBO:0086725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; not an essential gene","termid":"PBO:0086725"}


id: PBO:0074495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptosome associated protein 23 pseudogene 1","termid":"PBO:0074495"}


id: GO:0042440
data:
  {"annotated_genes":["SJAG_03961","SJAG_02876","SJAG_02896","SJAG_04397","SJAG_01841","SJAG_01192","SJAG_01372","SJAG_01155","SJAG_01786","SJAG_05283","SJAG_03862","SJAG_04109","SJAG_00366","SJAG_04944","SJAG_00097","SJAG_03173"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89239,105578],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006784"},{"annotations":[101235,109942,112713,91837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006783"},{"annotations":[102643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042167"},{"annotations":[66685,113055,87024,88390,92435,91838,90494,88899],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006782"},{"annotations":[111501,93858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019354"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pigment, any general or particular coloring matter in living organisms, e.g. melanin.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_00366":null,"SJAG_01155":null,"SJAG_01192":null,"SJAG_01372":null,"SJAG_01786":null,"SJAG_01841":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03173":null,"SJAG_03862":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04397":null,"SJAG_04944":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment metabolic process","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"pigment metabolism","type":"exact"}],"termid":"GO:0042440","terms_by_termid":{"GO:0006782":null,"GO:0006783":null,"GO:0006784":null,"GO:0019354":null,"GO:0042167":null}}


id: MOD:00301
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(N-acetylglucosamine-1-phosphoryl)-L-serine.","definition_xrefs":["PubMed:6438439","PubMed:6993483","PubMed:8631906","RESID:AA0296","Unimod:428","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"},{"relation_name":"is_a","term_name":"glycosylphosphorylated residue","termid":"MOD:01804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(N-acetylglucosamine-1-phosphoryl)-L-serine","synonyms":[{"name":"(2S)-2-amino-3-[([(2-acetamido-2-deoxy-alpha-D-glucopyranosyl)oxy][hydroxy]phosphoryl)oxy]propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (GalNAcP) serine","type":"exact"},{"name":"N-acetylglucosamine-1-phosphoryl","type":"related"},{"name":"O-(N-acetylglucosamine-1-phosphoryl)-L-serine","type":"exact"},{"name":"O-GlcNAc-1-phosphorylation (of Serine)","type":"exact"},{"name":"O-beta(N-acetyl-glucosamine-alpha1-phosphate)serine","type":"exact"},{"name":"O3-(N-acetylglucosamine-1-phosphoryl)-L-serine","type":"exact"},{"name":"O3-L-serine 2-(acetylamino)-2-deoxy-D-glucopyranose 1-phosphodiester","type":"exact"},{"name":"PhosphoHexNAc","type":"related"}],"termid":"MOD:00301"}


id: GO:0050569
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycolaldehyde + H2O + NAD+ = glycolate + 2 H+ + NADH.","definition_xrefs":["RHEA:20001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glycolaldehyde dehydrogenase (NAD+) activity","secondary_identifiers":["MetaCyc:GLYCOLALD-DEHYDROG-RXN","EC:1.2.1.21","KEGG_REACTION:R01333"],"synonyms":[{"name":"glycol aldehyde dehydrogenase activity","type":"related"},{"name":"glycolaldehyde:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0050569"}


id: GO:0021711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroblasts acquire specialized structural and/or functional features that characterize the mature unipolar brush cell in the cerebellum. Differentiation includes the processes involved in commitment of a neuroblast to a unipolar brush cell fate. A unipolar brush cell is a glutamatergic interneuron found in the cerebellar cortex.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:dph","GOC:jid","PMID:15157725","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in hindbrain","termid":"GO:0021533"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"part_of","term_name":"cerebellar granular layer formation","termid":"GO:0021684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar unipolar brush cell differentiation","termid":"GO:0021711"}


id: PBO:0051724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitory synaptic factor 1","termid":"PBO:0051724"}


id: PBO:0079374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 9","termid":"PBO:0079374"}


id: FYPO:0007101
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the meiotic spindle is not straight, but instead forms an angle where microtubules from opposite poles interdigitate, during meiosis I.","definition_xrefs":["PomBase:mah","PMID:22292001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic spindle","termid":"FYPO:0000734"},{"relation_name":"is_a","term_name":"abnormal spindle morphology","termid":"FYPO:0003607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000120","FYPO:0005447","FYPO:0000002","FYPO:0000054","FYPO:0002399","FYPO:0001985"],"is_obsolete":false,"name":"bent spindle during meiosis I","synonyms":[{"name":"V-shaped bipolar spindle during meiosis I","type":"exact"},{"name":"bent bipolar spindle during meiosis I","type":"exact"},{"name":"bent meiotic spindle during meiosis I","type":"exact"},{"name":"bent spindle during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0007101"}


id: PBO:0089278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L2","termid":"PBO:0089278"}


id: GO:0007351
data:
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id: PBO:0013446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase complex subunit Erf4","termid":"PBO:0013446"}


id: GO:0030343
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: vitamin D3 + NADPH + H+ + O2 = calcidiol + NADP+ + H2O.","definition_xrefs":["ISBN:0471331309","MetaCyc:RXN-9829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin D 25-hydroxylase activity","termid":"GO:0070643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"vitamin D3 25-hydroxylase activity","secondary_identifiers":["RHEA:32903","Reactome:R-HSA-5602147","Reactome:R-HSA-209845"],"synonyms":[{"name":"cholecalciferol 25-hydroxylase activity","type":"exact"}],"termid":"GO:0030343"}


id: PBO:0072931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 11","termid":"PBO:0072931"}


id: PATO:0000785
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000785 muscle function value (obsolete PATO:0000785)","termid":"PATO:0000785"}


id: PBO:0000398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim15 (predicted)","termid":"PBO:0000398"}


id: GO:1902511
data:
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id: PBO:0041069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain protein I3 pseudogene 2","termid":"PBO:0041069"}


id: GO:0140696
data:
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id: PBO:0074227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 46 member 1","termid":"PBO:0074227"}


id: GO:0006511
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id: FYPO:0000779
data:
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id: FYPO:0003378
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the first meiotic nuclear division, in which homologous chromosomes are normally paired and segregated from each other, does not occur.","definition_xrefs":["GO:0007127","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished meiosis","termid":"FYPO:0000474"},{"relation_name":"is_a","term_name":"abnormal meiosis I","termid":"FYPO:0003603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished meiosis I","synonyms":[{"name":"abolished first meiotic nuclear division","type":"exact"},{"name":"absent meiosis I","type":"exact"},{"name":"meiosis I abolished","type":"exact"},{"name":"meiosis I: absent","type":"exact"}],"termid":"FYPO:0003378"}


id: PBO:0063696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate kinase 1","termid":"PBO:0063696"}


id: PR:O94387
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dbl8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ATP-dependent helicase C29A10.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A10.10c","synonyms":[{"name":"Spom972h-dbl8","type":"exact"}],"termid":"PR:O94387"}


id: GO:0002010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the molecular signal from the arterial baroreceptors is relayed to the vasomotor center causing it to signal increase arterial pressure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process involved in regulation of systemic arterial blood pressure","termid":"GO:0001976"},{"relation_name":"part_of","term_name":"baroreceptor response to decreased systemic arterial blood pressure","termid":"GO:0001982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"excitation of vasomotor center by baroreceptor signaling","synonyms":[{"name":"excitation of vasomotor center by baroreceptor signalling","type":"exact"}],"termid":"GO:0002010"}


id: GO:0043223
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ubiquitin ligase complex, located in the cytoplasm, in which a cullin from the Cul1 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a Skp1 adaptor and an F-box protein. SCF complexes are involved in targeting proteins for degradation by the proteasome. The best characterized complexes are those from yeast and mammals (with core subunits named Cdc53/Cul1, Rbx1/Hrt1/Roc1).","definition_xrefs":["PMID:15688063","PMID:15571813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic ubiquitin ligase complex","termid":"GO:0000153"},{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"cytoplasmic SCF ubiquitin ligase complex","synonyms":[{"name":"cytoplasmic SCF complex","type":"exact"},{"name":"cytoplasmic Skp1/Cul1/F-box protein complex","type":"exact"},{"name":"cytoplasmic cullin complex","type":"exact"}],"termid":"GO:0043223"}


id: GO:0008489
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a beta-D-glucosyl-(1<->1')-N-acylsphing-4-enine + UDP-alpha-D-galactose = a beta-D-Gal-(1->4)-beta-D-Glc-(1<->1)-Cer(d18:1(4E)) + H+ + UDP.","definition_xrefs":["PMID:9593693","RHEA:31495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"UDP-galactose:glucosylceramide beta-1,4-galactosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-12119","Reactome:R-HSA-9851347","EC:2.4.1.274"],"synonyms":[{"name":"LacCer synthase activity","type":"exact"},{"name":"UDP-galactose glucosylceramide beta-1,4-galactosyltransferase activity","type":"exact"},{"name":"lactosylceramide synthase activity","type":"exact"}],"termid":"GO:0008489"}


id: PBO:0014603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBF transcription factor activator Rep1","termid":"PBO:0014603"}


id: PBO:0068421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding region (RNP1, RRM) containing 3 pseudogene 1","termid":"PBO:0068421"}


id: PBO:0031491
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_spindle","termid":"PBO:0031491"}


id: GO:1905114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any cell surface receptor signaling pathway that is involved in cell-cell signaling.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060","ISBN:0-7167-3051-0"],"gene_count":0,"genotype_count":0,"name":"obsolete cell surface receptor signaling pathway involved in cell-cell signaling (obsolete GO:1905114)","synonyms":[{"name":"cell surface receptor linked signal transduction involved in cell-cell signaling","type":"exact"},{"name":"cell surface receptor linked signal transduction involved in cell-cell signalling","type":"exact"},{"name":"cell surface receptor linked signaling pathway involved in cell-cell signaling","type":"exact"},{"name":"cell surface receptor linked signaling pathway involved in cell-cell signalling","type":"exact"},{"name":"cell surface receptor linked signalling pathway involved in cell-cell signaling","type":"exact"},{"name":"cell surface receptor linked signalling pathway involved in cell-cell signalling","type":"exact"},{"name":"cell surface receptor signaling pathway involved in cell-cell signalling","type":"exact"}],"termid":"GO:1905114"}


id: PBO:0052672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 40","termid":"PBO:0052672"}


id: PBO:0063418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 3A","termid":"PBO:0063418"}


id: PBO:0005302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol kinase Sec59 (predicted)","termid":"PBO:0005302"}


id: PR:O14164
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 3 subunit C that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.16c","secondary_identifiers":["UniProtKB:O14164"],"synonyms":[{"name":"SPAC1E11.01c","type":"related"},{"name":"Spom972h-Eif3c","type":"exact"},{"name":"eIF3 p93 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eIF3c (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eif3c","type":"related"},{"name":"eukaryotic translation initiation factor 3 93 kDa subunit homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tif33","type":"related"},{"name":"translation initiation factor eIF3, p93 subunit homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14164"}


id: SO:0000435
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polypurine tract within an LTR_retrotransposon.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conserved_region","termid":"SO:0000330"},{"relation_name":"part_of","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RR_tract","synonyms":[{"name":"LTR retrotransposon poly purine tract","type":"related"},{"name":"RR tract","type":"exact"}],"termid":"SO:0000435"}


id: PR:O13798
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cid16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caffeine-induced protein 16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.01","synonyms":[{"name":"Spom972h-cid16","type":"exact"}],"termid":"PR:O13798"}


id: GO:0004931
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a monoatomic cation by a channel that opens when ATP is bound by the channel complex or one of its constituent parts on the extracellular side of the plasma membrane.","definition_xrefs":["GOC:bf","PMID:9755289","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"excitatory extracellular ligand-gated monoatomic ion channel activity","termid":"GO:0005231"},{"relation_name":"is_a","term_name":"ATP-gated ion channel activity","termid":"GO:0035381"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"extracellularly ATP-gated monoatomic cation channel activity","secondary_identifiers":["Reactome:R-HSA-877187"],"synonyms":[{"name":"P2X receptor","type":"related"},{"name":"extracellularly ATP-gated cation channel activity","type":"broad"},{"name":"purinoceptor","type":"broad"},{"name":"purinoreceptor","type":"broad"}],"termid":"GO:0004931"}


id: PBO:0061245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA activated by DNA damage","termid":"PBO:0061245"}


id: GO:0039508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of the functional activity of a host receptor.","definition_xrefs":["GOC:sp","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host receptor activity (obsolete GO:0039508)","synonyms":[{"name":"down-regulation by virus of host receptor activity","type":"exact"},{"name":"downregulation by virus of host receptor activity","type":"exact"},{"name":"inhibition by virus of host receptor activity","type":"narrow"},{"name":"negative regulation by virus of host receptor activity","type":"exact"},{"name":"suppression by virus of host receptor function","type":"exact"},{"name":"viral inhibition of host receptor","type":"exact"}],"termid":"GO:0039508"}


id: PBO:0044342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 26","termid":"PBO:0044342"}


id: GO:0004021
data:
  {"annotated_genes":["SJAG_04145"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107294],"is_not":false,"summary":null,"term":"GO:0004021"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-alanine = L-glutamate + pyruvate.","definition_xrefs":["EC:2.6.1.2","RHEA:19453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanine-oxo-acid transaminase activity","termid":"GO:0047635"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016769","GO:0016740"],"is_obsolete":false,"name":"L-alanine:2-oxoglutarate aminotransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ALANINE-AMINOTRANSFERASE-RXN","Reactome:R-HSA-70523","Reactome:R-HSA-507775","Reactome:R-HSA-70524","KEGG_REACTION:R00258","Reactome:R-HSA-507749"],"synonyms":[{"name":"ALT","type":"related"},{"name":"GPT","type":"related"},{"name":"L-alanine aminotransferase activity","type":"broad"},{"name":"L-alanine transaminase activity","type":"broad"},{"name":"L-alanine-alpha-ketoglutarate aminotransferase activity","type":"related"},{"name":"alanine aminotransferase activity","type":"broad"},{"name":"alanine transaminase activity","type":"broad"},{"name":"alanine-alpha-ketoglutarate aminotransferase activity","type":"related"},{"name":"alanine-pyruvate aminotransferase activity","type":"related"},{"name":"beta-alanine aminotransferase","type":"broad"},{"name":"glutamic acid-pyruvic acid transaminase activity","type":"related"},{"name":"glutamic--alanine transaminase activity","type":"related"},{"name":"glutamic--pyruvic transaminase activity","type":"related"},{"name":"glutamic-pyruvic aminotransferase activity","type":"related"},{"name":"pyruvate transaminase activity","type":"broad"},{"name":"pyruvate-alanine aminotransferase activity","type":"related"},{"name":"pyruvate-glutamate transaminase activity","type":"related"}],"termid":"GO:0004021","terms_by_termid":{"GO:0004021":null}}


id: PBO:0090105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex subunit Tom20","termid":"PBO:0090105"}


id: GO:0106272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within the endoplasmic reticulum-Golgi intermediate compartment (ERGIC).","definition_xrefs":["PMID:32272059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to Golgi apparatus","termid":"GO:0034067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to ERGIC","termid":"GO:0106272"}


id: PBO:0039721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APOBEC3B antisense RNA 1","termid":"PBO:0039721"}


id: PBO:0058350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4723","termid":"PBO:0058350"}


id: PBO:0066716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 13","termid":"PBO:0066716"}


id: PBO:0039420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiopoietin 4","termid":"PBO:0039420"}


id: FYPO:0007992
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is decreased during metaphase.","definition_xrefs":["PMID:35286199","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle pole body during mitosis","termid":"FYPO:0002822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle pole body during metaphase","synonyms":[{"name":"decreased protein localisation to mitotic spindle pole body during metaphase","type":"exact"},{"name":"decreased protein localization to mitotic SPB during metaphase","type":"exact"}],"termid":"FYPO:0007992"}


id: FYPO:0003121
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the rate, or speed, of homologous chromosome pairing during meiosis (synapsis) is normal (i.e. indistinguishable from wild type) at a cis-acting homologous chromosome pairing region such as the sme2 locus.","definition_xrefs":["PomBase:mah","PMID:24173580","PMID:22582262","PMID:23117617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal homologous chromosome pairing at cis-acting homologous chromosome pairing region","termid":"FYPO:0003051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal rate of homologous chromosome pairing at cis-acting homologous chromosome pairing region","synonyms":[{"name":"normal rate of homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region","type":"exact"},{"name":"normal rate of homologous chromosome pairing at sme2 locus","type":"narrow"},{"name":"normal rate of synapsis at cis-acting homologous chromosome pairing region","type":"exact"}],"termid":"FYPO:0003121"}


id: SO:0000490
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one VJ-gene, one J-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"has_part","term_name":"VJ_gene_segment","termid":"SO:0000576"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VJ_J_C_cluster","synonyms":[{"name":"(VJ)-J-C-CLUSTER","type":"exact"},{"name":"VJ J C cluster","type":"exact"}],"termid":"SO:0000490"}


id: PBO:0048881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family member G, pseudogene","termid":"PBO:0048881"}


id: PBO:0038629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACKR4 pseudogene 1","termid":"PBO:0038629"}


id: PBO:0074580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 1","termid":"PBO:0074580"}


id: PBO:0113288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Positive regulator of the Gcn2p kinase activity; forms a complex with Gcn20p; proposed to stimulate Gcn2p activation by an uncharged tRNA; suppresses frameshifting at stalled ribosomes","termid":"PBO:0113288"}


id: PBO:0073074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndecan binding protein pseudogene 3","termid":"PBO:0073074"}


id: GO:1901895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of an ATPase-coupled calcium transmembrane transporter activity.","definition_xrefs":["PMID:19708671","GOC:BHF","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ATP-dependent activity","termid":"GO:0032780"},{"relation_name":"is_a","term_name":"negative regulation of calcium ion transmembrane transporter activity","termid":"GO:1901020"},{"relation_name":"is_a","term_name":"regulation of ATPase-coupled calcium transmembrane transporter activity","termid":"GO:1901894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of ATPase-coupled calcium transmembrane transporter activity","synonyms":[{"name":"down regulation of ATP phosphohydrolase (Ca2+-transporting)","type":"exact"},{"name":"down regulation of Ca(2+)-transporting ATPase activity","type":"exact"},{"name":"down regulation of Ca2+-pumping ATPase activity","type":"exact"},{"name":"down regulation of Ca2+-transporting ATPase activity","type":"exact"},{"name":"down regulation of calcium ABC transporter","type":"narrow"},{"name":"down regulation of calcium efflux ATPase","type":"narrow"},{"name":"down regulation of calcium pump","type":"broad"},{"name":"down regulation of calcium transporting ATPase activity","type":"exact"},{"name":"down regulation of calcium-translocating P-type ATPase activity","type":"narrow"},{"name":"down regulation of calcium-transporting ATPase activity","type":"exact"},{"name":"down regulation of plasma membrane Ca-ATPase","type":"narrow"},{"name":"down regulation of sarco(endo)plasmic reticulum Ca2+-ATPase","type":"narrow"},{"name":"down regulation of sarcoplasmic reticulum ATPase","type":"narrow"},{"name":"down-regulation of ATP phosphohydrolase (Ca2+-transporting)","type":"exact"},{"name":"down-regulation of Ca(2+)-transporting ATPase activity","type":"exact"},{"name":"down-regulation of Ca2+-pumping ATPase activity","type":"exact"},{"name":"down-regulation of Ca2+-transporting ATPase activity","type":"exact"},{"name":"down-regulation of calcium ABC transporter","type":"narrow"},{"name":"down-regulation of calcium efflux ATPase","type":"narrow"},{"name":"down-regulation of calcium pump","type":"broad"},{"name":"down-regulation of calcium transporting ATPase activity","type":"exact"},{"name":"down-regulation of calcium-translocating P-type ATPase activity","type":"narrow"},{"name":"down-regulation of calcium-transporting ATPase activity","type":"exact"},{"name":"down-regulation of plasma membrane Ca-ATPase","type":"narrow"},{"name":"down-regulation of sarco(endo)plasmic reticulum Ca2+-ATPase","type":"narrow"},{"name":"down-regulation of sarcoplasmic reticulum ATPase","type":"narrow"},{"name":"downregulation of ATP phosphohydrolase (Ca2+-transporting)","type":"exact"},{"name":"downregulation of Ca(2+)-transporting ATPase activity","type":"exact"},{"name":"downregulation of Ca2+-pumping ATPase activity","type":"exact"},{"name":"downregulation of Ca2+-transporting ATPase activity","type":"exact"},{"name":"downregulation of calcium ABC transporter","type":"narrow"},{"name":"downregulation of calcium efflux ATPase","type":"narrow"},{"name":"downregulation of calcium pump","type":"broad"},{"name":"downregulation of calcium transporting ATPase activity","type":"exact"},{"name":"downregulation of calcium-translocating P-type ATPase activity","type":"narrow"},{"name":"downregulation of calcium-transporting ATPase activity","type":"exact"},{"name":"downregulation of plasma membrane Ca-ATPase","type":"narrow"},{"name":"downregulation of sarco(endo)plasmic reticulum Ca2+-ATPase","type":"narrow"},{"name":"downregulation of sarcoplasmic reticulum ATPase","type":"narrow"},{"name":"inhibition of ATP phosphohydrolase (Ca2+-transporting)","type":"exact"},{"name":"inhibition of Ca(2+)-transporting ATPase activity","type":"exact"},{"name":"inhibition of Ca2+-pumping ATPase activity","type":"exact"},{"name":"inhibition of Ca2+-transporting ATPase activity","type":"exact"},{"name":"inhibition of calcium ABC transporter","type":"narrow"},{"name":"inhibition of calcium efflux ATPase","type":"narrow"},{"name":"inhibition of calcium pump","type":"broad"},{"name":"inhibition of calcium transporting ATPase activity","type":"exact"},{"name":"inhibition of calcium-translocating P-type ATPase activity","type":"narrow"},{"name":"inhibition of calcium-transporting ATPase activity","type":"narrow"},{"name":"inhibition of plasma membrane Ca-ATPase","type":"narrow"},{"name":"inhibition of sarco(endo)plasmic reticulum Ca2+-ATPase","type":"narrow"},{"name":"inhibition of sarcoplasmic reticulum ATPase","type":"narrow"},{"name":"negative regulation of ATP phosphohydrolase (Ca2+-transporting)","type":"exact"},{"name":"negative regulation of Ca(2+)-transporting ATPase activity","type":"exact"},{"name":"negative regulation of Ca2+-pumping ATPase activity","type":"exact"},{"name":"negative regulation of Ca2+-transporting ATPase activity","type":"exact"},{"name":"negative regulation of calcium ABC transporter","type":"narrow"},{"name":"negative regulation of calcium efflux ATPase","type":"narrow"},{"name":"negative regulation of calcium pump","type":"broad"},{"name":"negative regulation of calcium transporting ATPase activity","type":"exact"},{"name":"negative regulation of calcium-translocating P-type ATPase activity","type":"narrow"},{"name":"negative regulation of calcium-transporting ATPase activity","type":"exact"},{"name":"negative regulation of plasma membrane Ca-ATPase","type":"narrow"},{"name":"negative regulation of sarco(endo)plasmic reticulum Ca2+-ATPase","type":"narrow"},{"name":"negative regulation of sarcoplasmic reticulum ATPase","type":"narrow"}],"termid":"GO:1901895"}


id: SO:0002376
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for H_ACA_box_snoRNA. Members of the box H/ACA family contain an ACA triplet, exactly 3 nt upstream from the 3' end and an H-box in a hinge region that links two structurally similar functional domains of the molecule. Both boxes are important for snoRNA biosynthesis and function. A few box H/ACA snoRNAs are involved in rRNA processing; most others are known or predicted to participate in selection of uridine nucleosides in rRNA to be converted to pseudouridines. Site selection is mediated by direct base pairing of the snoRNA with rRNA through one or both targeting domains.","definition_xrefs":["PMID:12457565","PMID:22065625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNA_gene","termid":"SO:0001267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H_ACA_box_snoRNA_gene","synonyms":[{"name":"box H/ACA snoRNA gene, H ACA box snoRNA gene, H/ACA box snoRNA gene","type":"exact"}],"termid":"SO:0002376"}


id: PBO:0061141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NME/NM23 nucleoside diphosphate kinase 4","termid":"PBO:0061141"}


id: GO:0061543
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + 3-demethylubiquinol-6 = S-adenosyl-L-homocysteine + ubiquinol-6.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-demethylubiquinol-6 3-O-methyltransferase activity (obsolete GO:0061543)","termid":"GO:0061543"}


id: PBO:0084018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycosylated integral ER membrane protein of unknown function; forms an ER-membrane associated protein complex with Emp65p; member of the SUN-like family of proteins; genetic interactions suggest a role in folding of ER membrane proteins; required for nuclear envelope localization of Mps3p","termid":"PBO:0084018"}


id: PBO:0056001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated","termid":"PBO:0056001"}


id: PBO:0089401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation factor complex RNA-binding subunit Pcf11","termid":"PBO:0089401"}


id: SO:0000142
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A folded DNA sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_secondary_structure","termid":"SO:0000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA_sequence_secondary_structure","synonyms":[{"name":"DNA sequence secondary structure","type":"exact"}],"termid":"SO:0000142"}


id: PBO:0086949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ family nucleolar DNA helicase; role in genome integrity maintenance, chromosome synapsis, meiotic joint molecule/crossover formation; stimulates activity of Top3p; rapidly lost in response to rapamycin in Rrd1p-dependent manner; forms nuclear foci upon DNA replication stress; yeast SGS1 complements mutations in human homolog BLM implicated in Bloom syndrome; also similar to human WRN implicated in Werner syndrome; human BLM and WRN can each complement yeast null mutant","termid":"PBO:0086949"}


id: GO:0000435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involving galactose that activates or increases the rate of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transcription by galactose","termid":"GO:0000411"},{"relation_name":"is_a","term_name":"regulation of transcription from RNA polymerase II promoter by galactose","termid":"GO:0000431"},{"relation_name":"is_a","term_name":"carbon catabolite activation of transcription from RNA polymerase II promoter","termid":"GO:0000436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0008150","GO:0006355"],"is_obsolete":false,"name":"positive regulation of transcription from RNA polymerase II promoter by galactose","synonyms":[{"name":"activation of transcription from RNA polymerase II promoter by galactose","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter by galactose","type":"narrow"},{"name":"up regulation of transcription from RNA polymerase II promoter by galactose","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter by galactose","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter by galactose","type":"exact"}],"termid":"GO:0000435"}


id: PBO:0085852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the mitochondrion; deletion confers sensitivity to 4-(N-(S-glutathionylacetyl)amino) phenylarsenoxide (GSAO); YOR305W is not an essential gene","termid":"PBO:0085852"}


id: GO:0001534
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex that links the outer microtubule doublet of a 9+2 type ciliary or flagellar axoneme with the sheath that surrounds the central pair of microtubules. Composed of a stalk that attaches to each doublet microtubule and a globular structure (spoke head) that projects toward the central pair of microtubules.","definition_xrefs":["PMID:22118931","ISBN:0124325653","GOC:krc","PMID:25694453","PMID:34871179","PMID:9450971"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"axoneme","termid":"GO:0005930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"radial spoke","secondary_identifiers":["Wikipedia:Radial_spoke"],"termid":"GO:0001534"}


id: PBO:0084574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane protein of unknown function; overexpression suppresses NaCl sensitivity of sro7 mutant cells by restoring sodium pump (Ena1p) localization to the plasma membrane","termid":"PBO:0084574"}


id: PBO:0072468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 32","termid":"PBO:0072468"}


id: PBO:0046285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMAP like 3","termid":"PBO:0046285"}


id: PR:O94376
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- srb7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.10","synonyms":[{"name":"Spom972h-srb7","type":"exact"},{"name":"mediator complex subunit 21 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"suppressor of RNA polymerase B 7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94376"}


id: GO:0021809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Signaling between members of the neurotrophin family and their receptors that result in the start of cell motility as a component of the process of cerebral cortex glial-mediated radial migration.","definition_xrefs":["GOC:cls","GOC:dgh","GO_REF:0000021","GOC:dph","GOC:jid","PMID:12626695"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotrophic factor signaling initiating cell movement, involved in cerebral cortex radial glia guided migration (obsolete GO:0021809)","synonyms":[{"name":"neurotrophic factor signalling initiating cell movement, involved in cerebral cortex glial-mediated radial migration","type":"exact"}],"termid":"GO:0021809"}


id: SO:0001440
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-polar, hydorophobic amino acid encoded by the codon TGG.","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophan","synonyms":[{"name":"Trp","type":"exact"},{"name":"W","type":"exact"}],"termid":"SO:0001440"}


id: PBO:0066191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 12B","termid":"PBO:0066191"}


id: GO:0072251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the juxtaglomerulus cells of the metanephros as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juxtaglomerulus cell differentiation","termid":"GO:0072052"},{"relation_name":"is_a","term_name":"cell differentiation involved in metanephros development","termid":"GO:0072202"},{"relation_name":"part_of","term_name":"metanephric juxtaglomerular apparatus development","termid":"GO:0072206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric juxtaglomerulus cell differentiation","termid":"GO:0072251"}


id: PBO:0039464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 13A","termid":"PBO:0039464"}


id: GO:0034608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Location, by the male, of his partner's vulva when backing along the ventral side of the hermaphrodite during mating. The male stops at the vulva, coordinates his movements to the hermaphrodite's, and positions his tail precisely over the vulva so that he may insert his spicules and ejaculate.","definition_xrefs":["PMID:18050467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male mating behavior","termid":"GO:0060179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vulval location","termid":"GO:0034608"}


id: PBO:0034763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine tRNA C32 methyl transferase Trm141","termid":"PBO:0034763"}


id: GO:0047559
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-dehydro-L-gulonate + NAD(P)+ = (4R,5S)-4,5,6-trihydroxy-2,3-dioxohexanoate + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.130","MetaCyc:3-DEHYDRO-L-GULONATE-2-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3-dehydro-L-gulonate 2-dehydrogenase activity","synonyms":[{"name":"2,3-diketo-L-gulonate reductase activity","type":"related"},{"name":"3-dehydro-L-gulonate:NAD(P)+ 2-oxidoreductase activity","type":"related"},{"name":"3-keto-L-gulonate dehydrogenase activity","type":"related"},{"name":"3-ketogulonate dehydrogenase activity","type":"related"}],"termid":"GO:0047559"}


id: PBO:0012556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WIn Suppressing","termid":"PBO:0012556"}


id: PBO:0062225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AU member 1","termid":"PBO:0062225"}


id: PBO:0062282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily J member 2","termid":"PBO:0062282"}


id: PBO:0084026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GMP synthase; highly conserved enzyme that catalyzes the second step in the biosynthesis of GMP from inosine 5'-phosphate (IMP); transcription is not subject to regulation by guanine but is negatively regulated by nutrient starvation; reduction-of-function mutation gua1-G388D causes changes in cellular guanine nucleotide pools, defects in general protein synthesis, and impaired translation of GCN4 mRNA","termid":"PBO:0084026"}


id: GO:0099630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process during which neurotransmitter receptors in the postsynaptic specialization membrane are recycled via the endosome. This cycle includes release from anchoring (trapping), diffusion in the synaptic membrane to the postsynaptic endocytic region, endocytosis, transport to the endosome, recycling in the endosome, transport back the synaptic membrane and subsequent trapping in the postsynaptic specialization membrane.","definition_xrefs":["PMID:18832033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"neurotransmitter receptor cycle","termid":"GO:0099627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"postsynaptic neurotransmitter receptor cycle","termid":"GO:0099630"}


id: PBO:0072890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SBNO1 antisense RNA 1","termid":"PBO:0072890"}


id: GO:0061811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NAD = cyclic ADP-ribose + nicotinamide.","definition_xrefs":["GOC:PARL","PMID:11866528","GOC:dph","GOC:pad"],"gene_count":0,"genotype_count":0,"name":"obsolete ADP-ribosyl cyclase activity (obsolete GO:0061811)","termid":"GO:0061811"}


id: PBO:0005482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 4 (predicted)","termid":"PBO:0005482"}


id: GO:1904463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ergosteryl 3-beta-D-glucoside.","definition_xrefs":["GOC:TermGenie","GO_REF:0000068","PMID:26116408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"},{"relation_name":"is_a","term_name":"saponin biosynthetic process","termid":"GO:0016135"},{"relation_name":"is_a","term_name":"beta-glucoside biosynthetic process","termid":"GO:1901806"},{"relation_name":"is_a","term_name":"ergosteryl 3-beta-D-glucoside metabolic process","termid":"GO:1904461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"ergosteryl 3-beta-D-glucoside biosynthetic process","synonyms":[{"name":"ergosteryl 3-beta-D-glucoside anabolism","type":"exact"},{"name":"ergosteryl 3-beta-D-glucoside biosynthesis","type":"exact"},{"name":"ergosteryl 3-beta-D-glucoside formation","type":"exact"},{"name":"ergosteryl 3-beta-D-glucoside synthesis","type":"exact"}],"termid":"GO:1904463"}


id: PBO:0017640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sirtuin family histone deacetylase Hst4","termid":"PBO:0017640"}


id: PBO:0064519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POLR2M pseudogene 1","termid":"PBO:0064519"}


id: PBO:0082477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAP (cyclase-associated protein); N-terminus binds adenylate cyclase and facilitates activation by RAS; N-terminus forms novel hexameric star-shaped shuriken structures that directly catalyze cofilin-mediated severing of actin filaments; C-terminus binds and recycles cofilin bound, ADP-actin monomers, facilitating regulation of actin dynamics and cell morphogenesis; N- and C-termini can function as physically separate proteins; mCAP1 is the mouse homolog","termid":"PBO:0082477"}


id: PBO:0049956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A pseudogene 2","termid":"PBO:0049956"}


id: PBO:0072997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel alpha subunit 1","termid":"PBO:0072997"}


id: PBO:0063397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"programmed cell death 7","termid":"PBO:0063397"}


id: PBO:0031219
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_intracellular_protein_transport","termid":"PBO:0031219"}


id: GO:0019548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of arginine into other compounds, including spermine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arginine catabolic process","termid":"GO:0006527"},{"relation_name":"is_a","term_name":"spermine metabolic process","termid":"GO:0008215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"arginine catabolic process to spermine","secondary_identifiers":["MetaCyc:ARGSPECAT-PWY"],"synonyms":[{"name":"arginine breakdown to spermine","type":"exact"},{"name":"arginine degradation to spermine","type":"exact"}],"termid":"GO:0019548"}


id: GO:0039667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The uptake of a virus or viral genetic material into a host cell which occurs through retraction of a virion-bound pilus.","definition_xrefs":["GOC:bf","GOC:jl","VZ:981"],"gene_count":0,"genotype_count":0,"name":"obsolete viral entry into host cell via pilus retraction (obsolete GO:0039667)","termid":"GO:0039667"}


id: GO:0001597
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete apelin-like receptor (obsolete GO:0001597)","synonyms":[{"name":"APJ-like receptor","type":"exact"},{"name":"apelin-like receptor","type":"exact"}],"termid":"GO:0001597"}


id: PBO:0057485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 603","termid":"PBO:0057485"}


id: FYPO:0007678
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A localization phenotype observed in the vegetative growth phase of the life cycle in which the distribution of sterols in cellular membranes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:32320462","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal membrane lipid distribution","termid":"FYPO:0006546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal sterol distribution","termid":"FYPO:0007678"}


id: PBO:0081033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZC3H12A divergent transcript","termid":"PBO:0081033"}


id: GO:0071654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of chemokine (C-C motif) ligand 1.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-C motif) ligand 1 production","termid":"GO:0071652"},{"relation_name":"positively_regulates","term_name":"chemokine (C-C motif) ligand 1 production","termid":"GO:0071610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of chemokine (C-C motif) ligand 1 production","synonyms":[{"name":"positive regulation of CCL1 production","type":"exact"},{"name":"positive regulation of T cell activation 3 production","type":"exact"},{"name":"positive regulation of TCA-3 production","type":"exact"}],"termid":"GO:0071654"}


id: PBO:0054771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2183","termid":"PBO:0054771"}


id: PBO:0041260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 230","termid":"PBO:0041260"}


id: GO:0004353
data:
  {"annotated_genes":["SJAG_03266"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004354"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamate + H2O + NAD(P)+ = 2-oxoglutarate + NH3 + NAD(P)H + H+.","definition_xrefs":["EC:1.4.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"glutamate dehydrogenase [NAD(P)+] activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GLUTAMATE-DEHYDROGENASE-NADP+-RXN","Reactome:R-HSA-70589","Reactome:R-HSA-70600","MetaCyc:GLUTAMATE-SYN2-PWY"],"synonyms":[{"name":"L-glutamate:NAD(P)+ oxidoreductase (deaminating)","type":"related"},{"name":"glutamate biosynthesis, using glutamate dehydrogenase (NAD(P)+)","type":"related"},{"name":"glutamate biosynthetic process, using glutamate dehydrogenase (NAD(P)+)","type":"related"},{"name":"glutamic dehydrogenase activity","type":"broad"}],"termid":"GO:0004353","terms_by_termid":{"GO:0004354":null}}


id: PBO:0087095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L9B; homologous to mammalian ribosomal protein L9 and bacterial L6; RPL9B has a paralog, RPL9A, that arose from a single-locus duplication","termid":"PBO:0087095"}


id: PBO:0030376
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_anisomycin","termid":"PBO:0030376"}


id: GO:0016265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A permanent cessation of all vital functions: the end of life; can be applied to a whole organism or to a part of an organism.","definition_xrefs":["GOC:mah","GOC:mtg_apoptosis","ISBN:0877797099"],"gene_count":0,"genotype_count":0,"name":"obsolete death (obsolete GO:0016265)","secondary_identifiers":["Wikipedia:Death"],"termid":"GO:0016265"}


id: GO:0080118
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a brassinosteroid + 3'-phosphoadenosine-5'-phosphosulfate = sulfated brassinosteroid + adenosine-3',5'-diphosphate. This reaction is the transfer of a sulfate group to the hydroxyl group of a brassinosteroid acceptor, producing the sulfated brassinosteroid derivative.","definition_xrefs":["PMID:17039368","PMID:10409637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016782"],"is_obsolete":false,"name":"brassinosteroid sulfotransferase activity","termid":"GO:0080118"}


id: GO:0015705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of iodide into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion transport","termid":"GO:0006820"},{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"iodide transport","termid":"GO:0015705"}


id: PBO:0049475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"granzyme M","termid":"PBO:0049475"}


id: GO:0033863
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribose 1,5-diphosphate + ATP = 5-phospho-alpha-D-ribose 1-diphosphate + ADP + H+.","definition_xrefs":["EC:2.7.4.23","RHEA:20109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"ribose 1,5-bisphosphate phosphokinase activity","secondary_identifiers":["KEGG_REACTION:R06836","MetaCyc:RXN0-1401"],"synonyms":[{"name":"ATP:ribose-1,5-bisphosphate phosphotransferase activity","type":"related"},{"name":"PhnN","type":"related"},{"name":"ribose 1,5-bisphosphokinase activity","type":"related"}],"termid":"GO:0033863"}


id: PBO:0075901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2","termid":"PBO:0075901"}


id: GO:0033913
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the random hydrolysis of (1->2)-glucosidic linkages in (1->2)-beta-D-glucans.","definition_xrefs":["EC:3.2.1.71"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"glucan endo-1,2-beta-glucosidase activity","secondary_identifiers":["MetaCyc:3.2.1.71-RXN"],"synonyms":[{"name":"1,2-beta-D-glucan glucanohydrolase activity","type":"related"},{"name":"beta-D-1,2-glucanase activity","type":"related"},{"name":"endo-(1->2)-beta-D-glucanase activity","type":"related"},{"name":"endo-1,2-beta-glucanase activity","type":"related"}],"termid":"GO:0033913"}


id: PBO:0049052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPR50 antisense RNA 1","termid":"PBO:0049052"}


id: GO:0000148
data:
  {"annotated_genes":["SJAG_05285","SJAG_03587","SJAG_01453","SJAG_01288","SJAG_02222"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87636,90519,98694,102135,111871],"is_not":false,"summary":null,"term":"GO:0000148"}]},"cv_name":"cellular_component","definition":"A protein complex that catalyzes the transfer of a glucose group from UDP-glucose to a (1->3)-beta-D-glucan chain.","definition_xrefs":["PMID:7983071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01288":null,"SJAG_01453":null,"SJAG_02222":null,"SJAG_03587":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"1,3-beta-D-glucan synthase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"(1->3)-beta-glucan synthase complex","type":"exact"},{"name":"1,3-beta-glucan synthase complex","type":"exact"}],"termid":"GO:0000148","terms_by_termid":{"GO:0000148":null}}


id: GO:0008021
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A secretory organelle, typically 50 nm in diameter, of presynaptic nerve terminals; accumulates in high concentrations of neurotransmitters and secretes these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane.","definition_xrefs":["PMID:10099709","PMID:12563290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exocytic vesicle","termid":"GO:0070382"},{"relation_name":"part_of","term_name":"presynapse","termid":"GO:0098793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"synaptic vesicle","secondary_identifiers":["NIF_Subcellular:sao1071221672","Wikipedia:Synaptic_vesicle"],"synonyms":[{"name":"docked vesicle","type":"narrow"}],"termid":"GO:0008021"}


id: GO:0098981
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse that uses acetylcholine as a neurotransmitter.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cholinergic synapse","termid":"GO:0098981"}


id: PBO:0061246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide synthase 1","termid":"PBO:0061246"}


id: MOD:00521
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["RESID:AA0151#var","Unimod:153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"Hex2HexNAc2 N4-glycosylated asparagine","synonyms":[{"name":"Hex(2)HexNAc(2)","type":"related"},{"name":"Hex2HexNAc2","type":"related"}],"termid":"MOD:00521"}


id: GO:0061798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP=(8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate.","definition_xrefs":["PMID:25896388","GOC:dph","GOC:ik"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-carbon lyase activity","termid":"GO:0016830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"GTP 3',8'-cyclase activity","secondary_identifiers":["MetaCyc:RXN-8340","RHEA:49576","EC:4.1.99.22"],"termid":"GO:0061798"}


id: GO:0005875
data:
  {"annotated_genes":["SJAG_03673","SJAG_02336","SJAG_00140","SJAG_00397","SJAG_01837","SJAG_04412","SJAG_01370","SJAG_02561","SJAG_05185","SJAG_04841","SJAG_02807","SJAG_01546","SJAG_02286","SJAG_00332","SJAG_04745","SJAG_00113","SJAG_01297","SJAG_00930","SJAG_01613","SJAG_01662","SJAG_00697","SJAG_00773","SJAG_01739"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90819,93342],"is_not":false,"summary":null,"term":"GO:0005875"},{"annotations":[114745,112733,105258,107950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032133"},{"annotations":[107459,93633,87038,83825,96779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005868"},{"annotations":[91263,99027,110011,79201,107105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005869"},{"annotations":[87196,99601,92825,85017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005871"},{"annotations":[99948,104296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016938"},{"annotations":[95273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005872"},{"annotations":[99956,104304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005873"}]},"cv_name":"cellular_component","definition":"Any multimeric complex connected to a microtubule.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"microtubule cytoskeleton","termid":"GO:0015630"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00332":null,"SJAG_00397":null,"SJAG_00697":null,"SJAG_00773":null,"SJAG_00930":null,"SJAG_01297":null,"SJAG_01370":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01662":null,"SJAG_01739":null,"SJAG_01837":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02561":null,"SJAG_02807":null,"SJAG_03673":null,"SJAG_04412":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_05185":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0015630","GO:0005575"],"is_obsolete":false,"name":"microtubule associated complex","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000107":null},"termid":"GO:0005875","terms_by_termid":{"GO:0005868":null,"GO:0005869":null,"GO:0005871":null,"GO:0005872":null,"GO:0005873":null,"GO:0005875":null,"GO:0016938":null,"GO:0032133":null}}


id: GO:0060072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of potassium by a channel with a unit conductance of 100 to 220 picoSiemens that opens in response to stimulus by concerted actions of internal calcium ions and membrane potential. Large conductance calcium-activated potassium channels are less sensitive to calcium than are small or intermediate conductance calcium-activated potassium channels. Transport by a channel involves catalysis of facilitated diffusion of a solute (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel, without evidence for a carrier-mediated mechanism.","definition_xrefs":["PMID:17115074","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-activated potassium channel activity","termid":"GO:0015269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"large conductance calcium-activated potassium channel activity","secondary_identifiers":["GO:0022895"],"synonyms":[{"name":"BK KCa channel activity","type":"exact"},{"name":"BK calcium-activated potassium channel activity","type":"exact"},{"name":"BK channel activity","type":"related"},{"name":"large conductance KCa channel activity","type":"exact"}],"termid":"GO:0060072"}


id: GO:0070429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of the nucleotide-binding oligomerization domain containing 1 (NOD1) pathway.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0070425"},{"relation_name":"is_a","term_name":"regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway","termid":"GO:0070428"},{"relation_name":"negatively_regulates","term_name":"nucleotide-binding oligomerization domain containing 1 signaling pathway","termid":"GO:0070427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway","synonyms":[{"name":"negative regulation of NOD1 signaling pathway","type":"exact"},{"name":"negative regulation of nucleotide-binding oligomerization domain containing 1 signalling pathway","type":"exact"}],"termid":"GO:0070429"}


id: GO:1904320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of smooth muscle contraction involved in micturition.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18562635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smooth muscle contraction","termid":"GO:0045987"},{"relation_name":"is_a","term_name":"regulation of smooth muscle contraction involved in micturition","termid":"GO:1904318"},{"relation_name":"positively_regulates","term_name":"smooth muscle contraction involved in micturition","termid":"GO:0060083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of smooth muscle contraction involved in micturition","synonyms":[{"name":"activation of smooth muscle contraction involved in micturition","type":"narrow"},{"name":"activation of smooth muscle contraction involved in urination","type":"related"},{"name":"activation of urinary bladder smooth muscle contraction involved in micturition","type":"related"},{"name":"positive regulation of smooth muscle contraction involved in urination","type":"related"},{"name":"positive regulation of urinary bladder smooth muscle contraction involved in micturition","type":"related"},{"name":"up regulation of smooth muscle contraction involved in micturition","type":"exact"},{"name":"up regulation of smooth muscle contraction involved in urination","type":"related"},{"name":"up regulation of urinary bladder smooth muscle contraction involved in micturition","type":"related"},{"name":"up-regulation of smooth muscle contraction involved in micturition","type":"exact"},{"name":"up-regulation of smooth muscle contraction involved in urination","type":"related"},{"name":"up-regulation of urinary bladder smooth muscle contraction involved in micturition","type":"related"},{"name":"upregulation of smooth muscle contraction involved in micturition","type":"exact"},{"name":"upregulation of smooth muscle contraction involved in urination","type":"related"},{"name":"upregulation of urinary bladder smooth muscle contraction involved in micturition","type":"related"}],"termid":"GO:1904320"}


id: PBO:0043600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal cancer associated 1","termid":"PBO:0043600"}


id: GO:0061794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of conidium over time, from its formation to the mature structure. Conidia are non-motile spores produced via mitotic asexual reproduction in higher fungi; they are haploid cells genetically identical to their haploid parent. They are produced by conversion of hyphal elements, or are borne on sporogenous cells on or within specialized structures termed conidiophores, and participate in dispersal of the fungus.","definition_xrefs":["GOC:di","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"conidium development","termid":"GO:0061794"}


id: PBO:0073109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase/reductase family 16C member 5","termid":"PBO:0073109"}


id: GO:0000053
data:
  {"annotated_genes":["SJAG_04577"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106521],"is_not":false,"summary":null,"term":"GO:0000053"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving argininosuccinate, 2-(N(omega)-arginino)succinate, an intermediate in the ornithine-urea cycle, where it is synthesized from citrulline and aspartate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"tricarboxylic acid metabolic process","termid":"GO:0072350"},{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04577":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"argininosuccinate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"argininosuccinate metabolism","type":"exact"}],"termid":"GO:0000053","terms_by_termid":{"GO:0000053":null}}


id: GO:0070019
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A receptor complex that consists of two transforming growth factor beta (TGF-beta) type II receptor monomers. TGF-beta type II receptor dimers form in the presence or absence of ligand, and upon ligand binding can associate with TGF-beta type I receptor dimers.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta type II receptor homodimeric complex (obsolete GO:0070019)","synonyms":[{"name":"TGF-beta type II receptor complex","type":"exact"},{"name":"TGF-beta type II receptor dimer","type":"exact"},{"name":"TGFBR2 homodimer","type":"exact"},{"name":"transforming growth factor beta type II receptor complex","type":"exact"}],"termid":"GO:0070019"}


id: PBO:0000723
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.2.1.41","termid":"PBO:0000723"}


id: PR:Q9P4W9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps403 gene.","definition_xrefs":["UniProtKB:Q9P4W9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S4-C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC959.07","synonyms":[{"name":"Spom972h-rps403","type":"exact"}],"termid":"PR:Q9P4W9"}


id: PBO:0074506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear RNA activating complex polypeptide 5","termid":"PBO:0074506"}


id: PR:O59792
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cif1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calnexin-independence factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC364.01","synonyms":[{"name":"Spom972h-cif1","type":"exact"}],"termid":"PR:O59792"}


id: PBO:0061008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"niban apoptosis regulator 1","termid":"PBO:0061008"}


id: PBO:0079865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil-DNA glycosylase pseudogene 2","termid":"PBO:0079865"}


id: SO:0002368
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for plastid SSU rRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"plastid_rRNA_gene","termid":"SO:0002366"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plastid_SSU_rRNA_gene","synonyms":[{"name":"plastid small subunit rRNA gene","type":"exact"}],"termid":"SO:0002368"}


id: GO:1903706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hemopoiesis.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:PARL","GOC:pad","PMID:20080761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"hemopoiesis","termid":"GO:0030097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hemopoiesis","synonyms":[{"name":"regulation of blood cell biosynthesis","type":"exact"},{"name":"regulation of blood cell formation","type":"exact"},{"name":"regulation of haemopoiesis","type":"exact"},{"name":"regulation of hematopoiesis","type":"exact"}],"termid":"GO:1903706"}


id: FYPO:0006615
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115207,115208],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0006616"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell has a greater diameter (thickness; width) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell shape","termid":"FYPO:0001126"},{"relation_name":"is_a","term_name":"abnormal cell size","termid":"FYPO:0001127"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_04522":null},"genotype_count":2,"genotypes_by_uniquename":{"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga6delta":{"display_name":"rga6delta","display_uniquename":"rga6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"increased cell diameter","references_by_uniquename":{"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_00028","SJAG_04522"],"single_locus_genotype_uniquenames":["rga6delta","rga4delta"],"synonyms":[{"name":"increased cell thickness","type":"exact"},{"name":"increased cell width","type":"exact"}],"termid":"FYPO:0006615","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0006616":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0004895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin Spn3","termid":"PBO:0004895"}


id: PBO:0028221
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_snRNA_splicing","termid":"PBO:0028221"}


id: FYPO:0001068
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of tyrosine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tyrosine import","termid":"FYPO:0001067"},{"relation_name":"is_a","term_name":"decreased amino acid import during vegetative growth","termid":"FYPO:0001360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"decreased tyrosine import","synonyms":[{"name":"decreased L-tyrosine import","type":"exact"},{"name":"decreased L-tyrosine import across plasma membrane","type":"exact"},{"name":"decreased tyrosine import during mitotic cell cycle","type":"related"},{"name":"decreased tyrosine import during vegetative growth","type":"exact"},{"name":"decreased tyrosine import into cell","type":"exact"},{"name":"decreased tyrosine uptake","type":"exact"},{"name":"reduced tyrosine import","type":"exact"}],"termid":"FYPO:0001068"}


id: _global:function_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"a relation between a function and an independent continuant (the bearer), in which the function specifically depends on the bearer for its existence","direct_ancestors":[{"relation_name":"is_a","term_name":"characteristic_of","termid":"_global:characteristic_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"function_of","secondary_identifiers":["RO:0000079"],"termid":"_global:function_of"}


id: PBO:0040594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain and CNC homolog 2","termid":"PBO:0040594"}


id: GO:0036320
data:
  {"annotated_genes":["SJAG_01978"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84214],"is_not":false,"summary":null,"term":"GO:0036320"}]},"cv_name":"molecular_function","definition":"Combining with the mating-type peptide pheromone P-factor and transmitting the signal across the membrane to initiate a change in cell activity. P-factor is a polypeptide of 23 residues, with the sequence Thr-Tyr-Ala-Asp-Phe-Leu-Arg-Ala-Tyr-Gln-Ser-Trp-Asn-Thr-Phe-Val-Asn-Pro-Asp-Arg-Pro-Asn-Leu, and is a peptide pheromone released by Schizosaccharomyces pombe cells of the cellular mating type Plus.","definition_xrefs":["PMID:8314086","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating-type factor pheromone receptor activity","termid":"GO:0004932"},{"relation_name":"is_a","term_name":"peptide pheromone receptor activity","termid":"GO:0036318"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"mating-type P-factor pheromone receptor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"P-factor mating pheromone receptor activity","type":"exact"},{"name":"P-factor receptor activity","type":"exact"}],"termid":"GO:0036320","terms_by_termid":{"GO:0036320":null}}


id: PBO:0027038
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromatin_binding_at_centromere_central_core","termid":"PBO:0027038"}


id: GO:0070076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a histone by the removal of a methyl group from a lysine residue.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone lysine demethylation (obsolete GO:0070076)","termid":"GO:0070076"}


id: PBO:0052409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, two Ig domains and short cytoplasmic tail 3","termid":"PBO:0052409"}


id: GO:0047303
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycine + oxaloacetate = L-aspartate + glyoxylate.","definition_xrefs":["RHEA:17141","EC:2.6.1.35"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016769"],"is_obsolete":false,"name":"glycine-oxaloacetate transaminase activity","secondary_identifiers":["MetaCyc:2.6.1.35-RXN","KEGG_REACTION:R00373"],"synonyms":[{"name":"glycine--oxaloacetate aminotransferase activity","type":"related"},{"name":"glycine-oxalacetate aminotransferase activity","type":"related"},{"name":"glycine-oxaloacetate aminotransferase activity","type":"exact"},{"name":"glycine:oxaloacetate aminotransferase activity","type":"related"}],"termid":"GO:0047303"}


id: GO:0010913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of sterigmatocystin biosynthesis. Sterigmatocystin biosynthetic processes are the chemical reactions and pathways resulting in the formation of sterigmatocystin, a carcinogenic mycotoxin produced in high yields by strains of the common molds.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"sterigmatocystin biosynthetic process","termid":"GO:0045461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of sterigmatocystin biosynthetic process","termid":"GO:0010913"}


id: PATO:0001690
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A contractility quality inhering in a bearer by virtue of the bearer's ability of contracting or being contracted.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"contractility","termid":"PATO:0001579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contractile","termid":"PATO:0001690"}


id: GO:0170040
data:
  {"annotated_genes":["SJAG_03434","SJAG_00714","SJAG_00830","SJAG_03641","SJAG_02450","SJAG_00881","SJAG_02235","SJAG_01271","SJAG_03398","SJAG_00937","SJAG_03861","SJAG_00495","SJAG_01903","SJAG_02901","SJAG_04145","SJAG_00493","SJAG_03290"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019544"},{"annotations":[93413,109267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019547"},{"annotations":[109268,93414,102820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010121"},{"annotations":[102033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006530"},{"annotations":[107876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006533"},{"annotations":[87752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006540"},{"annotations":[78514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006538"},{"annotations":[93926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006546"},{"annotations":[109093,83504,92468,84739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019464"},{"annotations":[107292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042853"},{"annotations":[114070,103171],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010133"},{"annotations":[99844,90264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006567"},{"annotations":[102826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006572"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any amino acid that is incorporated into protein naturally by ribosomal translation of mRNA, and that has a specific codon for translation from mRNA to protein.","definition_xrefs":["GOC:ew"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"proteinogenic amino acid metabolic process","termid":"GO:0170039"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00493":null,"SJAG_00495":null,"SJAG_00714":null,"SJAG_00830":null,"SJAG_00881":null,"SJAG_00937":null,"SJAG_01271":null,"SJAG_01903":null,"SJAG_02235":null,"SJAG_02450":null,"SJAG_02901":null,"SJAG_03290":null,"SJAG_03398":null,"SJAG_03434":null,"SJAG_03641":null,"SJAG_03861":null,"SJAG_04145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"proteinogenic amino acid catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"proteinogenic amino acid breakdown","type":"exact"},{"name":"proteinogenic amino acid catabolism","type":"exact"},{"name":"proteinogenic amino acid degradation","type":"exact"}],"termid":"GO:0170040","terms_by_termid":{"GO:0006530":null,"GO:0006533":null,"GO:0006538":null,"GO:0006540":null,"GO:0006546":null,"GO:0006567":null,"GO:0006572":null,"GO:0010121":null,"GO:0010133":null,"GO:0019464":null,"GO:0019544":null,"GO:0019547":null,"GO:0042853":null}}


id: PBO:0070643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 14","termid":"PBO:0070643"}


id: GO:0010594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the orderly movement of an endothelial cell into the extracellular matrix to form an endothelium.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell migration","termid":"GO:0010632"},{"relation_name":"regulates","term_name":"endothelial cell migration","termid":"GO:0043542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endothelial cell migration","termid":"GO:0010594"}


id: GO:0033259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which new strands of DNA are synthesized in a plastid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated DNA replication","termid":"GO:0006261"},{"relation_name":"is_a","term_name":"plastid DNA metabolic process","termid":"GO:0033258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006260","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"plastid DNA replication","synonyms":[{"name":"plastid DNA synthesis","type":"related"},{"name":"replication of plastid DNA","type":"exact"}],"termid":"GO:0033259"}


id: PR:O94585
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1442.13c gene.","definition_xrefs":["UniProtKB:O94585","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated protein C1442.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.13c","synonyms":[{"name":"Spom972h-SPCC1442.13c","type":"exact"},{"name":"meiotic chromosome segregation protein C1442.13c (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94585"}


id: PBO:0078354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 1-2","termid":"PBO:0078354"}


id: PBO:0003644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,3-glucan synthase Mok12","termid":"PBO:0003644"}


id: PBO:0049908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexosaminidase subunit alpha","termid":"PBO:0049908"}


id: PBO:0000410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy C terminal domain family protein (predicted)","termid":"PBO:0000410"}


id: PBO:0066021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN binding protein 2","termid":"PBO:0066021"}


id: PBO:0030447
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphatase_activity","termid":"PBO:0030447"}


id: SO:0002277
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Crypton is a superfamily of DNA transposons that use tyrosine recombinase (YR) to cut and rejoin the recombining DNA molecules.","definition_xrefs":["PMID:22011512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_transposon","termid":"SO:0000182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Crypton_YR_transposon","synonyms":[{"name":"Crypton YR transposon","type":"exact"},{"name":"Crypton transposon","type":"exact"},{"name":"DYC transposon","type":"exact"}],"termid":"SO:0002277"}


id: GO:2000917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glucuronoxylan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucuronoxylan catabolic process","termid":"GO:2000915"},{"relation_name":"is_a","term_name":"positive regulation of xylan catabolic process","termid":"GO:2001002"},{"relation_name":"positively_regulates","term_name":"glucuronoxylan catabolic process","termid":"GO:2000886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of glucuronoxylan catabolic process","synonyms":[{"name":"positive regulation of glucuronoxylan catabolism","type":"exact"}],"termid":"GO:2000917"}


id: SO:0001888
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A fusion where the deletion brings together transcription factor binding sites.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_region_fusion","termid":"SO:0001887"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFBS_fusion","synonyms":[{"name":"TFBS fusion ","type":"exact"},{"name":"transcription factor binding site fusion","type":"exact"}],"termid":"SO:0001888"}


id: GO:0014834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process by which the number of skeletal muscle satellite cells in a skeletal muscle is maintained during muscle regeneration. There are at least three mechanisms by which this is achieved. Skeletal muscle satellite stem cell asymmetric division ensures satellite stem cell numbers are kept constant. Symmetric division of these cells amplifies the number of skeletal muscle satellite stem cells. Some adult skeletal muscle myoblasts (descendants of activated satellite cells) can develop back into quiescent satellite cells, replenishing the overall pool of satellite cells.","definition_xrefs":["GOC:ef","GOC:dph","GOC:mtg_muscle","PMID:23303905","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of cell number","termid":"GO:0098727"},{"relation_name":"part_of","term_name":"skeletal muscle tissue regeneration","termid":"GO:0043403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle satellite cell maintenance involved in skeletal muscle regeneration","synonyms":[{"name":"satellite cell population maintenance","type":"exact"},{"name":"satellite cell compartment self-renewal involved in skeletal muscle regeneration","type":"exact"},{"name":"satellite cell self-renewal","type":"broad"}],"termid":"GO:0014834"}


id: MOD:01199
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to an N-heptosyl-L-arginine.","definition_xrefs":["Unimod:490#R"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heptosylated residue","termid":"MOD:00925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"N-heptosyl-L-arginine","synonyms":[{"name":"Hep","type":"related"},{"name":"Heptose","type":"related"}],"termid":"MOD:01199"}


id: MOD:01993
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by formation of a thioether bond between a cysteine thiol and the beta-carbon of another amino acid residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioether crosslinked residues","termid":"MOD:00687"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-carbon thioether crosslinked residues","termid":"MOD:01993"}


id: PBO:0034513
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_H4-K20_dimethylation_at_double-strand_break_site","termid":"PBO:0034513"}


id: PBO:0069559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 831, pseudogene","termid":"PBO:0069559"}


id: GO:0019035
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nucleoprotein complex containing viral genetic material and the viral integrase, required for genome integration into the host's genome. May contain other proteins.","definition_xrefs":["PMID:21037296","PMID:2721960","PMID:29900498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"host cell","termid":"GO:0043657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"viral integration complex","secondary_identifiers":["Wikipedia:Pre-integration_complex"],"synonyms":[{"name":"PIC","type":"broad"},{"name":"pre-integration complex","type":"exact"}],"termid":"GO:0019035"}


id: PBO:0057028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 125a","termid":"PBO:0057028"}


id: PBO:0051060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 3-22","termid":"PBO:0051060"}


id: PBO:0034050
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_structural_homology_relationship_with","termid":"PBO:0034050"}


id: MOD:00704
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively forms a double bond by removing a molecule of water from a residue.","definition_xrefs":["DeltaMass:0","Unimod:23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrated residue","synonyms":[{"name":"Dehydrated","type":"related"},{"name":"Dehydration","type":"related"}],"termid":"MOD:00704"}


id: PBO:0083741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential component of the MIND kinetochore complex; joins kinetochore subunits contacting DNA to those contacting microtubules; critical to kinetochore assembly; complex consists of Mtw1p Including Nnf1p-Nsl1p-Dsn1p (MIND)","termid":"PBO:0083741"}


id: GO:0098766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. M phase during meiosis I.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete meiosis I M phase (obsolete GO:0098766)","termid":"GO:0098766"}


id: GO:0090629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the synthesis of DNA from a template strand in a net 3' to 5' direction is started.","definition_xrefs":["GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"lagging strand elongation","termid":"GO:0006273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006260","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"lagging strand initiation","termid":"GO:0090629"}


id: PBO:0079695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like 5 pseudogene 3","termid":"PBO:0079695"}


id: PBO:0113818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocon beta subunit, GEF Sbh1","termid":"PBO:0113818"}


id: PBO:0072893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"somatomedin B and thrombospondin type 1 domain containing","termid":"PBO:0072893"}


id: PBO:0073479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3GL interacting endocytic adaptor 1","termid":"PBO:0073479"}


id: FYPO:0001994
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains a single septum, has one nucleus, is swollen, is elongated, and is inviable. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal. The septum is in an abnormal location, and the nucleus is located in one compartment of the septated cell. The cell compartment containing the nucleus is swollen (i.e. has a larger diameter than the other compartment).","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"mislocalized septum, near new end","termid":"FYPO:0001391"},{"relation_name":"is_a","term_name":"inviable elongated mononucleate vegetative cell with mislocalized septum","termid":"FYPO:0001992"},{"relation_name":"is_a","term_name":"inviable swollen mononucleate monoseptate vegetative cell","termid":"FYPO:0002103"},{"relation_name":"is_a","term_name":"inviable swollen elongated septated vegetative cell","termid":"FYPO:0002845"},{"relation_name":"output_of","term_name":"abnormal cell cycle arrest in mitotic interphase before NETO","termid":"FYPO:0002017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000641","FYPO:0000631","FYPO:0000337","FYPO:0000004","FYPO:0000032","FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"inviable swollen elongated mononucleate vegetative cell with mislocalized septum near new end","synonyms":[{"name":"inviable elongated mononucleate vegetative cell with mislocalized septum near new end and increased cell volume","type":"exact"},{"name":"inviable enlarged elongated mononucleate vegetative cell with mislocalized septum near new end","type":"exact"},{"name":"inviable swollen elongated mononucleate cell with mislocalized septum near non-growing end","type":"narrow"},{"name":"inviable swollen elongated mononucleate monoseptate vegetative cell with mislocalized septum near new end","type":"exact"},{"name":"inviable swollen elongated mononucleate vegetative cell with mislocalised septum near new end","type":"exact"},{"name":"inviable swollen elongated mononucleate vegetative cell with mislocalized septum near new end and mislocalized nucleus","type":"exact"},{"name":"inviable swollen elongated mononucleate vegetative cell with mislocalized septum near new end during mitotic cell cycle","type":"related"},{"name":"inviable swollen elongated mononucleate vegetative cell with misplaced septum near new end","type":"exact"},{"name":"inviable swollen elongated mononucleate vegetative cell with single mislocalized septum near new end","type":"exact"},{"name":"lethal; swollen elongated mononucleate vegetative cell with mislocalized septum near new end","type":"exact"},{"name":"long swollen mononucleate cell with mislocalized septum near new end","type":"exact"},{"name":"long swollen mononucleate cell with mislocalized septum near non-growing end","type":"narrow"},{"name":"swollen elongated mononucleate cell with abnormal septum location near new end","type":"exact"},{"name":"swollen elongated mononucleate cell with abnormal septum location near non-growing end","type":"narrow"},{"name":"swollen elongated mononucleate cell with abnormal septum position near new end","type":"exact"},{"name":"swollen elongated mononucleate cell with abnormal septum position near non-growing end","type":"narrow"},{"name":"swollen elongated mononucleate cell with asymmetric septum near new end","type":"exact"},{"name":"swollen elongated mononucleate cell with asymmetric septum near non-growing end","type":"narrow"},{"name":"swollen elongated mononucleate cell with asymmetrically located septum near new end","type":"exact"},{"name":"swollen elongated mononucleate cell with asymmetrically located septum near non-growing end","type":"narrow"},{"name":"swollen elongated mononucleate cell with mislocalised septum near new end","type":"exact"},{"name":"swollen elongated mononucleate cell with mislocalised septum near non-growing end","type":"narrow"},{"name":"swollen elongated mononucleate cell with mislocalized septum near new end","type":"exact"},{"name":"swollen elongated mononucleate cell with mislocalized septum near new end during vegetative growth","type":"exact"},{"name":"swollen elongated mononucleate cell with mislocalized septum near non-growing end","type":"narrow"},{"name":"swollen elongated mononucleate cell with mislocalized septum near non-growing end during vegetative growth","type":"narrow"},{"name":"swollen elongated mononucleate vegetative cell with mislocalized septum near non-growing end","type":"narrow"}],"termid":"FYPO:0001994"}


id: FYPO:0005117
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to is normal (i.e. indistinguishable from wild type) in extent, timing, start or termination site, etc. when the cell is subject to nitrogen starvation. All genes, or a specific subset of genes, may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription","termid":"FYPO:0002882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000294","FYPO:0000257"],"is_obsolete":false,"name":"normal transcription during nitrogen starvation","synonyms":[{"name":"normal transcription during cellular response to nitrogen starvation","type":"exact"},{"name":"normal transcription during nitrogen depletion","type":"exact"},{"name":"normal transcription during nitrogen deprivation","type":"exact"},{"name":"normal transcription during nitrogen limitation","type":"exact"},{"name":"normal transcription in response to nitrogen starvation","type":"exact"}],"termid":"FYPO:0005117"}


id: PR:O14043
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- csc4 gene.","definition_xrefs":["UniProtKB:O14043","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2C4.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2C4.10c","synonyms":[{"name":"Spom972h-csc4","type":"exact"}],"termid":"PR:O14043"}


id: PBO:0026820
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_endosome","termid":"PBO:0026820"}


id: PBO:0074686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 66","termid":"PBO:0074686"}


id: PBO:0069963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1257, pseudogene","termid":"PBO:0069963"}


id: GO:0009020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing 2'-O-methylguanosine.","definition_xrefs":["EC:2.1.1.34","RHEA:20077"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA (guanosine-2'-O-)-methyltransferase activity (obsolete GO:0009020)","termid":"GO:0009020"}


id: PBO:0051152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-32 (pseudogene)","termid":"PBO:0051152"}


id: PATO:0000977
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000977 absolute permeability value (obsolete PATO:0000977)","termid":"PATO:0000977"}


id: PBO:0017816
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Familial Kufor-Rakeb Syndrome","termid":"PBO:0017816"}


id: PBO:0014594
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Silencing In the Middle of the centromere","termid":"PBO:0014594"}


id: GO:0051458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of corticotropin by a cell. Corticotropin hormone is a polypeptide hormone synthesized and secreted from corticotropes in the anterior lobe of the pituitary gland in response to corticotropin-releasing hormone (CRH) released by the hypothalamus.","definition_xrefs":["GOC:cjm","PMID:11027914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone secretion","termid":"GO:0030072"},{"relation_name":"is_a","term_name":"endocrine hormone secretion","termid":"GO:0060986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"corticotropin secretion","synonyms":[{"name":"ACTH secretion","type":"exact"},{"name":"adrenocorticotropic hormone secretion","type":"exact"},{"name":"adrenocorticotropin secretion","type":"related"},{"name":"adrenotropic hormone secretion","type":"exact"},{"name":"adrenotropin secretion","type":"exact"},{"name":"corticotropic hormone secretion","type":"exact"}],"termid":"GO:0051458"}


id: PBO:0030167
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spore_lysis","termid":"PBO:0030167"}


id: PBO:0034727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologous to S. cereviaie YER035W and YGL222C","termid":"PBO:0034727"}


id: GO:0000801
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structural unit of the synaptonemal complex found between the lateral elements.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"synaptonemal complex","termid":"GO:0000795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"central element","termid":"GO:0000801"}


id: PBO:0043852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular retinoic acid binding protein 1","termid":"PBO:0043852"}


id: GO:2000958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cyclodextrin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of cyclodextrin metabolic process","termid":"GO:2000955"},{"relation_name":"is_a","term_name":"regulation of cyclodextrin catabolic process","termid":"GO:2000957"},{"relation_name":"negatively_regulates","term_name":"cyclodextrin catabolic process","termid":"GO:2000901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of cyclodextrin catabolic process","synonyms":[{"name":"negative regulation of cyclodextrin catabolism","type":"exact"}],"termid":"GO:2000958"}


id: PBO:0033760
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_duration_of_meiosis_I","termid":"PBO:0033760"}


id: PBO:0004947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim21 (predicted)","termid":"PBO:0004947"}


id: GO:0030338
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CMP-N-acetyl-beta-neuraminate + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = CMP-N-glycoloyl-beta-neuraminate + 2 Fe(III)-[cytochrome b5] + H2O.","definition_xrefs":["EC:1.14.18.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen","termid":"GO:0016716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"CMP-N-acetylneuraminate monooxygenase activity","secondary_identifiers":["RHEA:16145","MetaCyc:1.14.18.2-RXN"],"synonyms":[{"name":"CMP-N-acetylneuraminate hydroxylase activity","type":"related"},{"name":"CMP-N-acetylneuraminic acid hydroxylase activity","type":"exact"},{"name":"CMP-Neu5Ac hydroxylase activity","type":"related"},{"name":"cytidine monophosphoacetylneuraminate monooxygenase activity","type":"related"}],"termid":"GO:0030338"}


id: PBO:0002179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome C oxidase assembly factor Coa2 (predicted)","termid":"PBO:0002179"}


id: PBO:0074179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 2","termid":"PBO:0074179"}


id: GO:0140878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of griseofulvin, an important antifungal drug that has been in use for a long time for treating dermatophyte infections.","definition_xrefs":["PMID:20534346","PMID:23978092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"griseofulvin biosynthetic process","secondary_identifiers":["MetaCyc:PWY-7653"],"synonyms":[{"name":"griseofulvin anabolism","type":"exact"},{"name":"griseofulvin biosynthesis","type":"exact"},{"name":"griseofulvin formation","type":"exact"},{"name":"griseofulvin synthesis","type":"exact"}],"termid":"GO:0140878"}


id: GO:0034167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 10 signaling pathway.","definition_xrefs":["PMID:17328678","PMID:16551253","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"},{"relation_name":"regulates","term_name":"toll-like receptor 10 signaling pathway","termid":"GO:0034166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of toll-like receptor 10 signaling pathway","synonyms":[{"name":"regulation of TLR10 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 10 signalling pathway","type":"exact"}],"termid":"GO:0034167"}


id: PBO:0003327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol 4-kinase Stt4 (predicted)","termid":"PBO:0003327"}


id: PBO:0109024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HHLA1 neighbor of OC90","termid":"PBO:0109024"}


id: PBO:0012599
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae RAD16","termid":"PBO:0012599"}


id: PR:Q9Y7Z4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A conserved oligomeric Golgi complex subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13302:SF8","PRO:DNx","OMA:SCHPO04103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved oligomeric Golgi complex subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1539.05","secondary_identifiers":["UniProtKB:Q9Y7Z4"],"synonyms":[{"name":"COG complex subunit 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-COG3","type":"exact"},{"name":"component of oligomeric Golgi complex 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7Z4"}


id: PBO:0057089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 185","termid":"PBO:0057089"}


id: PBO:0089414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC1 kinase family protein, implicted in mitochondrial ergosterol and phospholipid homeostasis","termid":"PBO:0089414"}


id: PBO:0060611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCCRP1, F-box associated domain containing","termid":"PBO:0060611"}


id: PBO:0072204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 3","termid":"PBO:0072204"}


id: PBO:0051692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80 complex subunit B","termid":"PBO:0051692"}


id: PBO:0041712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CALML3 antisense RNA 1","termid":"PBO:0041712"}


id: FYPO:0006491
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of chitin synthase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"abnormal chitin synthase activity","termid":"FYPO:0006491"}


id: PBO:0089312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall glucan glucosidase Exg2","termid":"PBO:0089312"}


id: PBO:0054339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1732","termid":"PBO:0054339"}


id: PBO:0084185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone demethylase and transcription factor; regulates genes during nutrient limitation; activity modulated by proteasome-mediated proteolysis; has JmjC and JmjN domain in N-terminus that interact, promoting stability and proper transcriptional activity; contains two transactivating domains downstream of Jmj domains and a C-terminal DNA binding domain; relocalizes to the cytosol in response to hypoxia; GIS1 has a paralog, RPH1, that arose from the whole genome duplication","termid":"PBO:0084185"}


id: PBO:0054651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2056","termid":"PBO:0054651"}


id: PBO:0051620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin enhancer binding factor 2 pseudogene 2","termid":"PBO:0051620"}


id: GO:0160093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of cordate pharynx over time, from its formation to the mature structure.","definition_xrefs":["PMID:23020903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pharynx development","termid":"GO:0060465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chordate pharynx development","termid":"GO:0160093"}


id: PBO:0088487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA translocase/ SUMO-targeted ubiquitin ligase E3","termid":"PBO:0088487"}


id: PBO:0056279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase alpha class 2B member 1","termid":"PBO:0056279"}


id: GO:1903507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of nucleic acid-templated transcription.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:pr","GOC:txnOH","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of nucleic acid-templated transcription (obsolete GO:1903507)","synonyms":[{"name":"down regulation of nucleic acid-templated transcription","type":"exact"},{"name":"down-regulation of nucleic acid-templated transcription","type":"exact"},{"name":"downregulation of nucleic acid-templated transcription","type":"exact"},{"name":"inhibition of nucleic acid-templated transcription","type":"narrow"}],"termid":"GO:1903507"}


id: PBO:0091384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi Ca(2+)/H(+) antiporter Gdt2","termid":"PBO:0091384"}


id: GO:0039517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a virus effects a change in host protein serine/threonine phosphatase activity.","definition_xrefs":["GOC:sp","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host protein serine/threonine phosphatase activity (obsolete GO:0039517)","synonyms":[{"name":"modulation by virus of protein serine/threonine phosphatase activity in host","type":"exact"},{"name":"regulation by virus of host protein serine/threonine phosphatase activity","type":"exact"}],"termid":"GO:0039517"}


id: PBO:0030681
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_vegetative_cell","termid":"PBO:0030681"}


id: PBO:0033768
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_spindle_pole_body_duplication","termid":"PBO:0033768"}


id: PBO:0065706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine synthase 7","termid":"PBO:0065706"}


id: GO:0009029
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-(1->6)-beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate + ATP = ADP + 2 H+ + lipid IV(a).","definition_xrefs":["RHEA:20700","EC:2.7.1.130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"tetraacyldisaccharide 4'-kinase activity","secondary_identifiers":["MetaCyc:TETRAACYLDISACC4KIN-RXN","KEGG_REACTION:R04657"],"synonyms":[{"name":"ATP:2,3,2',3'-tetrakis(3-hydroxytetradecanoyl)-D-glucosaminyl-beta-D-1,6-glucosaminyl-beta-phosphate 4'-O-phosphotransferase activity","type":"related"},{"name":"lipid-A 4'-kinase activity","type":"related"}],"termid":"GO:0009029"}


id: GO:0046023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cell cycle process that modulates the frequency, rate or extent of transcription from an RNA polymerase III promoter that occurs during the mitotic cell cycle.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase III promoter during mitotic cell cycle (obsolete GO:0046023)","synonyms":[{"name":"mitotic regulation of transcription from Pol III promoter","type":"exact"},{"name":"regulation of transcription from Pol III promoter, mitotic","type":"exact"},{"name":"regulation of transcription from RNA polymerase III promoter during mitosis","type":"exact"}],"termid":"GO:0046023"}


id: FYPO:0002680
data:
  {"alleles_by_uniquename":{"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115595],"is_not":false,"summary":null,"term":"FYPO:0002680"},{"annotations":[115592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001038"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphorylation","termid":"FYPO:0002677"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01787":null,"SJAG_02592":null,"SJAG_04551":null},"genotype_count":2,"genotypes_by_uniquename":{"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"increased protein phosphorylation","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_01787"],"single_locus_genotype_uniquenames":["sty1delta","pck1delta"],"termid":"FYPO:0002680","terms_by_termid":{"FYECO:0000207":null,"FYPO:0001038":null,"FYPO:0002680":null}}


id: PBO:0055445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2876","termid":"PBO:0055445"}


id: PBO:0068356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 138 pseudogene 1","termid":"PBO:0068356"}


id: GO:1903630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aminoacyl-tRNA ligase activity.","definition_xrefs":["GOC:TermGenie","PMID:2280766","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ligase activity","termid":"GO:0051340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of aminoacyl-tRNA ligase activity","synonyms":[{"name":"regulation of aminoacyl-tRNA synthetase activity","type":"exact"},{"name":"regulation of aminoacyl-tRNA synthetase auxiliary protein activity","type":"related"}],"termid":"GO:1903630"}


id: PBO:0036160
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_transport_along_microtubule_during_vegetative_growth","termid":"PBO:0036160"}


id: GO:0061172
data:
  {"annotated_genes":["SJAG_04522","SJAG_00317","SJAG_01373","SJAG_00845"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904846"},{"annotations":[103666,108533,99766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061173"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the establishment of bipolar cell polarity. Bipolar organization is the organization that is a mirror image along an axis from a plane.","definition_xrefs":["GOC:vw","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of cell polarity","termid":"GO:2000114"},{"relation_name":"regulates","term_name":"establishment of bipolar cell polarity","termid":"GO:0061171"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00317":null,"SJAG_00845":null,"SJAG_01373":null,"SJAG_04522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"regulation of establishment of bipolar cell polarity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061172","terms_by_termid":{"GO:0061173":null,"GO:1904846":null}}


id: PBO:0078311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (GTC) 7-1","termid":"PBO:0078311"}


id: PBO:0085444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Porphobilinogen deaminase; catalyzes the conversion of 4-porphobilinogen to hydroxymethylbilane, the third step in heme biosynthesis; localizes to the cytoplasm and nucleus; expression is regulated by Hap2p-Hap3p, but not by levels of heme; human homolog HMBS can complement yeast mutant and allow growth of haploid null after sporulation of a heterozygous diploid","termid":"PBO:0085444"}


id: PBO:0003032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine transporter (predicted)","termid":"PBO:0003032"}


id: GO:1901311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of gene expression involved in extracellular matrix organization.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of gene expression involved in extracellular matrix organization (obsolete GO:1901311)","synonyms":[{"name":"regulation of expression of extracellular matrix proteins","type":"exact"},{"name":"regulation of extracellular matrix protein production","type":"related"}],"termid":"GO:1901311"}


id: GO:0047400
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + phosphonoacetate = acetate + H+ + phosphate.","definition_xrefs":["RHEA:16749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-phosphorus bonds","termid":"GO:0016827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phosphonoacetate hydrolase activity","secondary_identifiers":["MetaCyc:3.11.1.2-RXN","KEGG_REACTION:R00318","EC:3.11.1.2"],"synonyms":[{"name":"phosphonoacetate phosphonohydrolase activity","type":"related"}],"termid":"GO:0047400"}


id: GO:2000403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lymphocyte migration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mononuclear cell migration","termid":"GO:0071677"},{"relation_name":"is_a","term_name":"regulation of lymphocyte migration","termid":"GO:2000401"},{"relation_name":"positively_regulates","term_name":"lymphocyte migration","termid":"GO:0072676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lymphocyte migration","termid":"GO:2000403"}


id: PBO:0057270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 494","termid":"PBO:0057270"}


id: PBO:0068519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 114, pseudogene","termid":"PBO:0068519"}


id: PBO:0113032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell-wall L-asparaginase II involved in asparagine catabolism; expression induced during nitrogen starvation; ORF contains a short non-coding RNA that enhances expression of full-length gene; likely arose in via horizontal gene transfer from the wine yeast Wickerhamomyces anomalus or a close relative; enzyme preparation shows antitumor activity; reference strain S288C has four copies of ASP3; ASP3-2 has a paralog, ASP3-4, that arose from a segmental duplication","termid":"PBO:0113032"}


id: PBO:0011505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anthranilate synthase component II, multifunctional enzyme (predicted)","termid":"PBO:0011505"}


id: PBO:0044580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBI pseudogene 2","termid":"PBO:0044580"}


id: PBO:0042027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 85B","termid":"PBO:0042027"}


id: GO:1905322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesenchymal stem cell migration.","definition_xrefs":["GOC:TermGenie","PMID:26846297","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"regulation of mesenchymal stem cell migration","termid":"GO:1905320"},{"relation_name":"positively_regulates","term_name":"mesenchymal stem cell migration","termid":"GO:1905319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal stem cell migration","synonyms":[{"name":"activation of mesenchymal stem cell migration","type":"narrow"},{"name":"up regulation of mesenchymal stem cell migration","type":"exact"},{"name":"up-regulation of mesenchymal stem cell migration","type":"exact"},{"name":"upregulation of mesenchymal stem cell migration","type":"exact"}],"termid":"GO:1905322"}


id: PBO:0082263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aminolevulinate dehydratase; a homo-octameric enzyme, catalyzes the conversion of 5-aminolevulinate to porphobilinogen, the second step in heme biosynthesis; enzymatic activity is zinc-dependent; localizes to the cytoplasm and nucleus; human homolog ALAD can complement yeast hem2 mutant","termid":"PBO:0082263"}


id: GO:0021930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of neuroblasts that will give rise to granule cells. A granule cell is a glutamatergic interneuron found in the cerebellar cortex.","definition_xrefs":["GOC:dph","GOC:cls","GO_REF:0000021","GOC:dgh","GOC:jid","PMID:15157725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation in external granule layer","termid":"GO:0021924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar granule cell precursor proliferation","termid":"GO:0021930"}


id: GO:0008856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the endonucleolytic cleavage of supercoiled plasma DNA to linear DNA duplexes.","definition_xrefs":["EC:3.1.22.5"],"gene_count":0,"genotype_count":0,"name":"obsolete exodeoxyribonuclease X activity (obsolete GO:0008856)","secondary_identifiers":["MetaCyc:3.1.22.5-RXN","EC:3.1.11.-"],"synonyms":[{"name":"Escherichia coli endodeoxyribonuclease X activity","type":"narrow"},{"name":"Escherichia coli endodeoxyribonuclease activity","type":"related"},{"name":"deoxyribonuclease X activity","type":"related"}],"termid":"GO:0008856"}


id: PBO:0054832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2245","termid":"PBO:0054832"}


id: PBO:0082550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Central component of the peroxisomal importomer complex; peroxisomal protein import machinery docking complex component; interacts with both PTS1 (Pex5p) and PTS2 (Pex7p) peroxisomal matrix protein signal recognition factors and membrane receptor Pex13p","termid":"PBO:0082550"}


id: PBO:0091824
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by A. thaliana cdc2bAt","termid":"PBO:0091824"}


id: GO:0003843
data:
  {"annotated_genes":["SJAG_03587","SJAG_00876","SJAG_02222","SJAG_05285","SJAG_01288"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87646,90523,102151,109228,111888],"is_not":false,"summary":null,"term":"GO:0003843"},{"annotations":[111889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140752"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + [(1->3)-beta-D-glucosyl](n) = UDP + [(1->3)-beta-D-glucosyl](n+1).","definition_xrefs":["EC:2.4.1.34"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00876":null,"SJAG_01288":null,"SJAG_02222":null,"SJAG_03587":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"1,3-beta-D-glucan synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:13-BETA-GLUCAN-SYNTHASE-RXN","GO:0009981","RHEA:21476"],"synonyms":[{"name":"(1,3)-beta-glucan (callose) synthase activity","type":"related"},{"name":"1,3-beta-D-glucan synthetase activity","type":"related"},{"name":"1,3-beta-D-glucan-UDP glucosyltransferase activity","type":"related"},{"name":"1,3-beta-glucan synthase activity","type":"related"},{"name":"1,3-beta-glucan-uridine diphosphoglucosyltransferase activity","type":"related"},{"name":"GS-II","type":"related"},{"name":"UDP-glucose-1,3-beta-D-glucan glucosyltransferase activity","type":"related"},{"name":"UDP-glucose-1,3-beta-glucan glucosyltransferase activity","type":"related"},{"name":"UDP-glucose-beta-glucan glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:(1,3)beta-glucan synthase activity","type":"related"},{"name":"UDP-glucose:1,3-beta-D-glucan 3-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose-1,3-beta-D-glucan glucosyltransferase activity","type":"related"},{"name":"UDPglucose:1,3-beta-D-glucan 3-beta-D-glucosyltransferase activity","type":"related"},{"name":"beta-1,3-glucan synthase activity","type":"exact"},{"name":"beta-1,3-glucan synthetase activity","type":"related"},{"name":"callose synthase activity","type":"exact"},{"name":"callose synthetase activity","type":"related"},{"name":"paramylon synthetase","type":"related"},{"name":"uridine diphosphoglucose-1,3-beta-glucan glucosyltransferase activity","type":"related"}],"termid":"GO:0003843","terms_by_termid":{"GO:0003843":null,"GO:0140752":null}}


id: PBO:0090462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer beta subunit","termid":"PBO:0090462"}


id: PBO:0063592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PEX5L antisense RNA 2","termid":"PBO:0063592"}


id: PBO:0057281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 502","termid":"PBO:0057281"}


id: PBO:0073494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-sulfoglucosamine sulfohydrolase","termid":"PBO:0073494"}


id: PBO:0041404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 6 open reading frame 118","termid":"PBO:0041404"}


id: GO:0017090
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is located in the cell membrane, and is involved in the metabolism of peptides, including neuropeptides. The complex has metalloendopeptidase activity that catalyzes the hydrolysis of protein and peptide substrates, preferentially on carboxyl side of hydrophobic residues.","definition_xrefs":["MEROPS_fam:M12","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"meprin A complex","synonyms":[{"name":"PABA peptide hydrolase complex","type":"exact"}],"termid":"GO:0017090"}


id: PBO:0070160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 74 pseudogene","termid":"PBO:0070160"}


id: PBO:0030696
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glutathione-disulfide_reductase_activity","termid":"PBO:0030696"}


id: PBO:0042083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 150","termid":"PBO:0042083"}


id: GO:0141044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The global programming of epigenetic modifications following binucleate central cell fertilization. This involves DNA methylation at the silent allele. In the endosperm, maternal genomes are hypomethylated compared with the paternal genome.","definition_xrefs":["PMID:18700816","PMID:16469697","PMID:10580004","PMID:16527743","PMID:28118754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epigenetic programming in the zygotic pronuclei","termid":"GO:0044725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"epigenetic programming in the endosperm","synonyms":[{"name":"epigenetic reprogramming in the endosperm","type":"exact"}],"termid":"GO:0141044"}


id: GO:0009559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the two uncellularized polar nuclei cellularize, fuse and acquire the specialized features of a mononucleate diploid central cell.","definition_xrefs":["GOC:mtg_plant","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"megagametogenesis","termid":"GO:0009561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryo sac central cell differentiation","synonyms":[{"name":"embryo sac endosperm mother cell differentiation","type":"exact"},{"name":"female gametophyte central cell differentiation","type":"exact"}],"termid":"GO:0009559"}


id: PATO:0001310
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A duration quality of a process inhering in a bearer by virtue of the bearer's duration of exhibition of thermal energy.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duration","termid":"PATO:0001309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"duration of temperature","termid":"PATO:0001310"}


id: GO:1903183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of SUMO ligase activity.","definition_xrefs":["GOC:PARL","GOC:TermGenie","PMID:16731528","GO_REF:0000059","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of SUMO transferase activity (obsolete GO:1903183)","synonyms":[{"name":"down regulation of SMT3 conjugating enzyme","type":"exact"},{"name":"down regulation of SUMO conjugating enzyme activity","type":"exact"},{"name":"down regulation of SUMO ligase activity","type":"exact"},{"name":"down-regulation of SMT3 conjugating enzyme","type":"exact"},{"name":"down-regulation of SUMO conjugating enzyme activity","type":"exact"},{"name":"down-regulation of SUMO ligase activity","type":"exact"},{"name":"downregulation of SMT3 conjugating enzyme","type":"exact"},{"name":"downregulation of SUMO conjugating enzyme activity","type":"exact"},{"name":"downregulation of SUMO ligase activity","type":"exact"},{"name":"inhibition of SMT3 conjugating enzyme","type":"narrow"},{"name":"inhibition of SUMO conjugating enzyme activity","type":"narrow"},{"name":"inhibition of SUMO ligase activity","type":"narrow"},{"name":"negative regulation of SMT3 conjugating enzyme","type":"exact"},{"name":"negative regulation of SUMO conjugating enzyme activity","type":"exact"}],"termid":"GO:1903183"}


id: PBO:0067267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 341, pseudogene","termid":"PBO:0067267"}


id: GO:0002834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a response to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"regulates","term_name":"response to tumor cell","termid":"GO:0002347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to tumor cell","synonyms":[{"name":"regulation of response to tumour cell","type":"exact"}],"termid":"GO:0002834"}


id: GO:0036300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A receptor-mediated endocytosis process that results in the movement of a B cell receptor from the plasma membrane to the inside of the cell.","definition_xrefs":["GOC:add","GOC:amm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor internalization","termid":"GO:0031623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"B cell receptor internalization","synonyms":[{"name":"B cell receptor uptake of antigen","type":"narrow"},{"name":"BCR endocytosis","type":"exact"},{"name":"BCR receptor internalization","type":"exact"}],"termid":"GO:0036300"}


id: GO:0052691
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-beta-L-arabinofuranose = UDP-beta-L-arabinopyranose.","definition_xrefs":["RHEA:28350","EC:5.4.99.30"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"UDP-arabinopyranose mutase activity","secondary_identifiers":["MetaCyc:RXN-11552"],"synonyms":[{"name":"UDP-L-Ara mutase activity","type":"related"},{"name":"UDP-L-arabinopyranose furanomutase activity","type":"related"},{"name":"UDP-L-arabinose mutase activity","type":"related"},{"name":"UDP-arabinopyranose pyranomutase activity","type":"exact"},{"name":"uridine-diphosphate-L-arabinose mutase activity","type":"related"}],"termid":"GO:0052691"}


id: PR:G2TRV0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf8 gene.","definition_xrefs":["UniProtKB:G2TRV0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC306.10","synonyms":[{"name":"Spom972h-wtf8","type":"exact"}],"termid":"PR:G2TRV0"}


id: FYPO:0002810
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the septation index is normal (i.e. indistinguishable from wild type) in a population in stationary phase. The septation index is the proportion of the population undergoing septation at any given time.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal septation index","termid":"FYPO:0001903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal septation index in stationary phase","synonyms":[{"name":"normal septation in stationary phase","type":"related"},{"name":"normal septation index during stationary phase","type":"exact"}],"termid":"FYPO:0002810"}


id: FYPO:0000678
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosomes are not segregated equally to the two spindle poles in the first meiotic nuclear division. For example, both homologs of one or more chromosomes may be segregated to the same spindle pole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unequal meiotic chromosome segregation","termid":"FYPO:0000925"},{"relation_name":"is_a","term_name":"abnormal homologous chromosome segregation","termid":"FYPO:0004159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"unequal homologous chromosome segregation","synonyms":[{"name":"aneuploidy","type":"related"},{"name":"chromosome non-disjunction at meiosis I","type":"related"},{"name":"chromosome nondisjunction at meiosis I","type":"related"},{"name":"chromosome nondisjunction during meiosis I","type":"related"},{"name":"impaired disjunction of homologous chromosomes","type":"exact"},{"name":"impaired homologous chromosome disjunction","type":"exact"},{"name":"meiosis I nondisjunction","type":"related"},{"name":"unequal chromosome disjunction during meiosis I","type":"exact"},{"name":"unequal homologous chromosome disjunction","type":"exact"}],"termid":"FYPO:0000678"}


id: GO:0051379
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to epinephrine, a hormone produced by the medulla of the adrenal glands that increases heart activity, improves the power and prolongs the action of muscles, and increases the rate and depth of breathing. It is synthesized by the methylation of norepinephrine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone binding","termid":"GO:0042562"},{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"catecholamine binding","termid":"GO:1901338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"epinephrine binding","synonyms":[{"name":"adrenaline binding","type":"exact"}],"termid":"GO:0051379"}


id: PBO:0073163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC63 homolog, protein translocation regulator","termid":"PBO:0073163"}


id: PBO:0056395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPRE1 pseudogene 2","termid":"PBO:0056395"}


id: GO:1904239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of VCP-NPL4-UFD1 AAA ATPase complex assembly.","definition_xrefs":["GOC:bf","GOC:PARL","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"VCP-NPL4-UFD1 AAA ATPase complex assembly","termid":"GO:1904210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","synonyms":[{"name":"regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"regulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"regulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"regulation of p97-Ufd1-Npl4 complex formation","type":"exact"}],"termid":"GO:1904239"}


id: PBO:0083233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; deletion enhances replication of Brome mosaic virus in S. cerevisiae, but likely due to effects on the overlapping gene","termid":"PBO:0083233"}


id: GO:0032064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of translation initiation, as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translational initiation in response to stress","termid":"GO:0032058"},{"relation_name":"is_a","term_name":"positive regulation of translation in response to osmotic stress","termid":"GO:0032062"},{"relation_name":"is_a","term_name":"regulation of translational initiation in response to osmotic stress","termid":"GO:0043561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of translational initiation in response to osmotic stress","synonyms":[{"name":"activation of translation initiation in response to osmotic stress","type":"narrow"},{"name":"stimulation of translation initiation in response to osmotic stress","type":"narrow"},{"name":"up regulation of translation initiation in response to osmotic stress","type":"exact"},{"name":"up-regulation of translation initiation in response to osmotic stress","type":"exact"},{"name":"upregulation of translation initiation in response to osmotic stress","type":"exact"}],"termid":"GO:0032064"}


id: PBO:0084818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; similar to Ups1p and Ups2p which are involved in regulation of mitochondrial cardiolipin and phosphatidylethanolamine levels; null is viable but interacts synthetically with ups1 and ups2 mutations; UPS3 has a paralog, UPS2, that arose from the whole genome duplication","termid":"PBO:0084818"}


id: PBO:0035730
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_methylation_during_vegetative_growth","termid":"PBO:0035730"}


id: PBO:0088199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc-knuckle transcription factor, repressor and activator; regulates genes involved in branched chain amino acid biosynthesis and ammonia assimilation; acts as a repressor in leucine-replete conditions and as an activator in the presence of alpha-isopropylmalate, an intermediate in leucine biosynthesis that accumulates during leucine starvation","termid":"PBO:0088199"}


id: GO:0071461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating redox state. Redox state refers to the balance of oxidized versus reduced forms of electron donors and acceptors in an organelle, cell or organ; plastoquinone, glutathione (GSH/GSSG), and nicotinamide nucleotides (NAD+/NADH and NADP+/NADPH) are among the most important.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to redox state","termid":"GO:0051775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to redox state","synonyms":[{"name":"cellular redox signal response","type":"exact"}],"termid":"GO:0071461"}


id: GO:0046561
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of proteins with broad specificity similar to that of pepsin A, preferring hydrophobic residues at P1 and P1', but also cleaving Gly20-Glu in the B chain of insulin. Clots milk, and activates trypsinogen.","definition_xrefs":["EC:3.4.23.20"],"gene_count":0,"genotype_count":0,"name":"obsolete penicillopepsin activity (obsolete GO:0046561)","synonyms":[{"name":"Penicillium aspartic proteinase activity","type":"related"},{"name":"Penicillium caseicolum aspartic proteinase activity","type":"related"},{"name":"Penicillium citrinum acid proteinase activity","type":"related"},{"name":"Penicillium citrinum aspartic proteinase activity","type":"related"},{"name":"Penicillium cyclopium acid proteinase activity","type":"related"},{"name":"Penicillium duponti aspartic proteinase activity","type":"related"},{"name":"Penicillium expansum acid proteinase activity","type":"related"},{"name":"Penicillium expansum aspartic proteinase activity","type":"related"},{"name":"Penicillium janthinellum acid proteinase activity","type":"related"},{"name":"Penicillium janthinellum aspartic protease activity","type":"related"},{"name":"Penicillium janthinellum aspartic proteinase activity","type":"related"},{"name":"Penicillium roqueforti acid proteinase activity","type":"related"},{"name":"acid protease A","type":"exact"},{"name":"penicillopepsin activity","type":"exact"},{"name":"peptidase A activity","type":"broad"}],"termid":"GO:0046561"}


id: PBO:0087401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Stress-responsive transcriptional activator; activated in stochastic pulses of nuclear localization in response to various stress conditions; binds DNA at stress response elements of responsive genes; light sensing pathway component that accumulates in the nucleus in response to blue light; relative distribution to nucleus increases upon DNA replication stress","termid":"PBO:0087401"}


id: PBO:0005329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xrcc4 like factor, cernunnon","termid":"PBO:0005329"}


id: PBO:0046360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosulfine alpha pseudogene 2","termid":"PBO:0046360"}


id: PBO:0111351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit processome, U3 snoRNP-associated protein Utp21","termid":"PBO:0111351"}


id: PBO:0068974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 218, pseudogene","termid":"PBO:0068974"}


id: GO:1900329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mannotriose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of mannotriose transport","termid":"GO:1900327"},{"relation_name":"positively_regulates","term_name":"mannotriose transport","termid":"GO:2001095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of mannotriose transport","synonyms":[{"name":"activation of mannotriose transport","type":"narrow"},{"name":"up regulation of mannotriose transport","type":"exact"},{"name":"up-regulation of mannotriose transport","type":"exact"},{"name":"upregulation of mannotriose transport","type":"exact"}],"termid":"GO:1900329"}


id: PBO:0083160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps the verified gene CAF20","termid":"PBO:0083160"}


id: GO:0003105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of glomerular filtration. Glomerular filtration is the process whereby blood is filtered by the glomerulus into the renal tubule.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glomerular filtration","termid":"GO:0003093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"glomerular filtration","termid":"GO:0003094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glomerular filtration","termid":"GO:0003105"}


id: PR:O74887
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxiredoxin tpx1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["UniProtKB:O74887","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxiredoxin tpx1","termid":"PR:000028932"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin tpx1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.03c","synonyms":[{"name":"Spom972h-tpx1","type":"exact"}],"termid":"PR:O74887"}


id: PBO:0065520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat domain 2","termid":"PBO:0065520"}


id: GO:1903545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a butyrate stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","GOC:mr","PMID:9734870"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to fatty acid","termid":"GO:0071398"},{"relation_name":"is_a","term_name":"response to butyrate","termid":"GO:1903544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to butyrate","termid":"GO:1903545"}


id: GO:0044196
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small, dense body one or more of which are present in the nucleus of eukaryotic host cells.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell nuclear part","termid":"GO:0044094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell nucleolus","termid":"GO:0044196"}


id: GO:0061741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chaperone-mediated protein transport process in which a protein that is bound to a chaperone and a lysosomal receptor is unfolded and transported into the lysosome as part of chaperone-mediated autophagy.","definition_xrefs":["GOC:dph","GOC:autophagy","PMID:22748206","GOC:PARL","GOC:pad"],"gene_count":0,"genotype_count":0,"name":"obsolete chaperone-mediated protein transport involved in chaperone-mediated autophagy (obsolete GO:0061741)","termid":"GO:0061741"}


id: PBO:0072556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRAGAP1 antisense RNA 1","termid":"PBO:0072556"}


id: PBO:0078188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 4-1","termid":"PBO:0078188"}


id: GO:0008681
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-methoxy-6-(all-trans-octaprenyl)phenol + H+ + NADPH + O2 = 2-methoxy-6-all-trans-octaprenyl-1,4-benzoquinol + H2O + NADP+.","definition_xrefs":["PMID:4572721","RHEA:29407","PMID:27822549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-octaprenyl-6-methoxyphenol hydroxylase activity","secondary_identifiers":["MetaCyc:2-OCTAPRENYL-6-METHOXYPHENOL-HYDROX-RXN"],"termid":"GO:0008681"}


id: GO:0097256
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-3-phenyllactate + NAD+ = 3-phenylpyruvate + H+ + NADH.","definition_xrefs":["RHEA:38351","PMID:10849007","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"phenyllactate dehydrogenase activity","termid":"GO:0097256"}


id: PBO:0028598
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_hydrostatic_pressure","termid":"PBO:0028598"}


id: GO:0061070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the female urethra over time from its initial formation to the mature structure. The female urethra is a renal system organ that carries urine from the bladder to outside the body, exiting above the vaginal opening.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urethra development","termid":"GO:0061068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female urethra development","termid":"GO:0061070"}


