# terms

id: GO:0097536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the thymus epithelium is generated and organized.","definition_xrefs":["PMID:22342843","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"part_of","term_name":"thymus development","termid":"GO:0048538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thymus epithelium morphogenesis","synonyms":[{"name":"thymic epithelium morphogenesis","type":"exact"}],"termid":"GO:0097536"}


id: PBO:0062883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OVCA2 serine hydrolase domain containing","termid":"PBO:0062883"}


id: PBO:0049268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-quadruplex forming sequence containing lncRNA","termid":"PBO:0049268"}


id: PBO:0004513
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.16","termid":"PBO:0004513"}


id: GO:0039644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces a host NF-kappaB cascade.","definition_xrefs":["PMID:25275128","PMID:10920188"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host NF-kappaB cascade (obsolete GO:0039644)","synonyms":[{"name":"inhibition of host NF-kappa-B by virus","type":"exact"},{"name":"suppression by virus of host NF-kappaB transcription factor activity","type":"related"}],"termid":"GO:0039644"}


id: GO:0051859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of symbiont defense(s) by active mechanisms that normally result in the shutting down of a symbiont pathway. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression of symbiont defenses (obsolete GO:0051859)","termid":"GO:0051859"}


id: PBO:0068218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 525","termid":"PBO:0068218"}


id: PBO:0072838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP30BP antisense RNA 1","termid":"PBO:0072838"}


id: PBO:0031764
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_during_vegetative_growth","termid":"PBO:0031764"}


id: PBO:0081195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein interacting with K protein 1 pseudogene 1","termid":"PBO:0081195"}


id: PBO:0027630
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_trimethylation_at_subtelomere","termid":"PBO:0027630"}


id: PBO:0048599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth hormone releasing hormone receptor","termid":"PBO:0048599"}


id: GO:0018306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into a 4Fe-4S iron-sulfur cluster via bis-L-cysteinyl-L-N3'-histidino-L-serinyl tetrairon tetrasulfide.","definition_xrefs":["RESID:AA0289"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into iron-sulfur cluster via bis-L-cysteinyl-L-N3'-histidino-L-serinyl tetrairon tetrasulfide (obsolete GO:0018306)","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via bis-L-cysteinyl-L-N3'-histidino-L-serinyl tetrairon tetrasulphide","type":"exact"}],"termid":"GO:0018306"}


id: PBO:0040800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BHLHE22 antisense RNA 1","termid":"PBO:0040800"}


id: GO:1990529
data:
  {"annotated_genes":["SJAG_03801","SJAG_03115"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99104,112206],"is_not":false,"summary":null,"term":"GO:1990529"}]},"cv_name":"cellular_component","definition":"A protein complex that is involved in the transfer of the four mannoses in the GPI-anchor precursor. In yeast S. cerevisiae this complex consists of Pbn1p and Gpi14p and in rat this complex consists of PIG-X and PIG-M.","definition_xrefs":["PMID:15635094","GOC:dph","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase complex","termid":"GO:0031501"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03115":null,"SJAG_03801":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005783","GO:0032991"],"is_obsolete":false,"name":"glycosylphosphatidylinositol-mannosyltransferase I complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GPI-MT-I complex","type":"related"}],"termid":"GO:1990529","terms_by_termid":{"GO:1990529":null}}


id: GO:0003078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate, or extent of natriuresis, the process of renal sodium excretion.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of natriuresis (obsolete GO:0003078)","synonyms":[{"name":"regulation of natriuresis","type":"exact"}],"termid":"GO:0003078"}


id: PATO:0001575
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pressure which is relatively low.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"pressure","termid":"PATO:0001025"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased pressure","synonyms":[{"name":"low pressure","type":"exact"}],"termid":"PATO:0001575"}


id: PBO:0090999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex TPR repeat subunit Tom70","termid":"PBO:0090999"}


id: PR:Q9C109
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAP27G11.16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P27G11.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP27G11.16","synonyms":[{"name":"Spom972h-SPAP27G11.16","type":"exact"}],"termid":"PR:Q9C109"}


id: GO:0001877
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with lipoarabinomannan and transmitting the signal to initiate an innate immune response.","definition_xrefs":["PMID:10586073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern recognition receptor activity","termid":"GO:0038187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"lipoarabinomannan immune receptor activity","synonyms":[{"name":"LAM receptor activity","type":"exact"},{"name":"lipoarabinomannan receptor activity","type":"broad"}],"termid":"GO:0001877"}


id: GO:0098517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which low humidity is detected and converted into a molecular signal.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of humidity","termid":"GO:0098513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of low humidity","termid":"GO:0098517"}


id: GO:0030373
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a high molecular weight B cell growth factor and transmitting the signal to initiate a change in cell activity.","definition_xrefs":["GOC:ai","GOC:signaling","PMID:2681271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"high molecular weight B cell growth factor receptor activity","synonyms":[{"name":"HMW-BCGF receptor","type":"exact"},{"name":"high molecular weight B lymphocyte growth factor receptor activity","type":"exact"},{"name":"high molecular weight B-cell growth factor receptor activity","type":"exact"},{"name":"high molecular weight B-lymphocyte growth factor receptor activity","type":"exact"}],"termid":"GO:0030373"}


id: GO:0106044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a sugar or dicarbonyl from a glycated guanine.","definition_xrefs":["PMID:28596309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"guanine deglycation","termid":"GO:0106044"}


id: GO:0071360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an exogenous double-stranded RNA stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to exogenous dsRNA","termid":"GO:0043330"},{"relation_name":"is_a","term_name":"cellular response to dsRNA","termid":"GO:0071359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to exogenous dsRNA","synonyms":[{"name":"cellular response to exogenous double-stranded RNA","type":"exact"},{"name":"cellular response to viral dsRNA","type":"narrow"}],"termid":"GO:0071360"}


id: GO:0032946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mononuclear cell proliferation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mononuclear cell proliferation","termid":"GO:0032944"},{"relation_name":"is_a","term_name":"positive regulation of leukocyte proliferation","termid":"GO:0070665"},{"relation_name":"positively_regulates","term_name":"mononuclear cell proliferation","termid":"GO:0032943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mononuclear cell proliferation","synonyms":[{"name":"activation of mononuclear cell proliferation","type":"narrow"},{"name":"positive regulation of PBMC proliferation","type":"narrow"},{"name":"positive regulation of peripheral blood mononuclear cell proliferation","type":"narrow"},{"name":"stimulation of mononuclear cell proliferation","type":"narrow"},{"name":"up regulation of mononuclear cell proliferation","type":"exact"},{"name":"up-regulation of mononuclear cell proliferation","type":"exact"},{"name":"upregulation of mononuclear cell proliferation","type":"exact"}],"termid":"GO:0032946"}


id: PBO:0054259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1644","termid":"PBO:0054259"}


id: GO:0042926
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of 3-hydroxyphenylpropionic acid from one side of a membrane to the other.","definition_xrefs":["GOC:jl","PMID:9098055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"xenobiotic transmembrane transporter activity","termid":"GO:0042910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"3-hydroxyphenylpropionic acid transmembrane transporter activity","synonyms":[{"name":"3-(3-hydroxyphenyl)propionic acid transporter activity","type":"exact"},{"name":"3-hydroxyphenylpropionic acid transporter activity","type":"related"},{"name":"m-hydroxyphenylpropionic acid transporter activity","type":"exact"}],"termid":"GO:0042926"}


id: PBO:0060731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase complex assembly factor 2","termid":"PBO:0060731"}


id: GO:1903408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sodium:potassium-exchanging ATPase activity.","definition_xrefs":["GO_REF:0000059","PMID:8160880","GOC:TermGenie","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ATP-dependent activity","termid":"GO:0032781"},{"relation_name":"is_a","term_name":"positive regulation of potassium ion transmembrane transporter activity","termid":"GO:1901018"},{"relation_name":"is_a","term_name":"regulation of P-type sodium:potassium-exchanging transporter activity","termid":"GO:1903406"},{"relation_name":"is_a","term_name":"positive regulation of sodium ion transmembrane transporter activity","termid":"GO:2000651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of P-type sodium:potassium-exchanging transporter activity","synonyms":[{"name":"activation of (Na+ + K+)-ATPase activity","type":"narrow"},{"name":"activation of (Na+ + K+)-activated ATPase activity","type":"narrow"},{"name":"activation of ATP phosphohydrolase (Na+/K+-exchanging)","type":"narrow"},{"name":"activation of Na(+)/K(+)-ATPase activity","type":"narrow"},{"name":"activation of Na(+)/K(+)-exchanging ATPase activity","type":"narrow"},{"name":"activation of Na+,K+ pump","type":"related"},{"name":"activation of Na+,K+-ATPase activity","type":"narrow"},{"name":"activation of Na+/K+-ATPase activity","type":"narrow"},{"name":"activation of Na+/K+-exchanging ATPase activity","type":"narrow"},{"name":"activation of Na,K-activated ATPase activity","type":"narrow"},{"name":"activation of Na,K-pump","type":"related"},{"name":"activation of sodium/potassium-exchanging ATPase activity","type":"narrow"},{"name":"activation of sodium/potassium-transporting ATPase activity","type":"narrow"},{"name":"activation of sodium:potassium exchanging ATPase activity","type":"narrow"},{"name":"activation of sodium:potassium-exchanging ATPase activity","type":"narrow"},{"name":"positive regulation of (Na+ + K+)-ATPase activity","type":"exact"},{"name":"positive regulation of (Na+ + K+)-activated ATPase activity","type":"exact"},{"name":"positive regulation of ATP phosphohydrolase (Na+/K+-exchanging)","type":"exact"},{"name":"positive regulation of Na(+)/K(+)-ATPase activity","type":"exact"},{"name":"positive regulation of Na(+)/K(+)-exchanging ATPase activity","type":"exact"},{"name":"positive regulation of Na+,K+ pump","type":"related"},{"name":"positive regulation of Na+,K+-ATPase activity","type":"exact"},{"name":"positive regulation of Na+/K+-ATPase activity","type":"exact"},{"name":"positive regulation of Na+/K+-exchanging ATPase activity","type":"exact"},{"name":"positive regulation of Na,K-activated ATPase activity","type":"exact"},{"name":"positive regulation of Na,K-pump","type":"related"},{"name":"positive regulation of sodium/potassium-exchanging ATPase activity","type":"exact"},{"name":"positive regulation of sodium/potassium-transporting ATPase activity","type":"exact"},{"name":"positive regulation of sodium:potassium exchanging ATPase activity","type":"exact"},{"name":"positive regulation of sodium:potassium-exchanging ATPase activity","type":"exact"},{"name":"up regulation of (Na+ + K+)-ATPase activity","type":"exact"},{"name":"up regulation of (Na+ + K+)-activated ATPase activity","type":"exact"},{"name":"up regulation of ATP phosphohydrolase (Na+/K+-exchanging)","type":"exact"},{"name":"up regulation of Na(+)/K(+)-ATPase activity","type":"exact"},{"name":"up regulation of Na(+)/K(+)-exchanging ATPase activity","type":"exact"},{"name":"up regulation of Na+,K+ pump","type":"related"},{"name":"up regulation of Na+,K+-ATPase activity","type":"exact"},{"name":"up regulation of Na+/K+-ATPase activity","type":"exact"},{"name":"up regulation of Na+/K+-exchanging ATPase activity","type":"exact"},{"name":"up regulation of Na,K-activated ATPase activity","type":"exact"},{"name":"up regulation of Na,K-pump","type":"related"},{"name":"up regulation of sodium/potassium-exchanging ATPase activity","type":"exact"},{"name":"up regulation of sodium/potassium-transporting ATPase activity","type":"exact"},{"name":"up regulation of sodium:potassium exchanging ATPase activity","type":"exact"},{"name":"up regulation of sodium:potassium-exchanging ATPase activity","type":"exact"},{"name":"up-regulation of (Na+ + K+)-ATPase activity","type":"exact"},{"name":"up-regulation of (Na+ + K+)-activated ATPase activity","type":"exact"},{"name":"up-regulation of ATP phosphohydrolase (Na+/K+-exchanging)","type":"exact"},{"name":"up-regulation of Na(+)/K(+)-ATPase activity","type":"exact"},{"name":"up-regulation of Na(+)/K(+)-exchanging ATPase activity","type":"exact"},{"name":"up-regulation of Na+,K+ pump","type":"related"},{"name":"up-regulation of Na+,K+-ATPase activity","type":"exact"},{"name":"up-regulation of Na+/K+-ATPase activity","type":"exact"},{"name":"up-regulation of Na+/K+-exchanging ATPase activity","type":"exact"},{"name":"up-regulation of Na,K-activated ATPase activity","type":"exact"},{"name":"up-regulation of Na,K-pump","type":"related"},{"name":"up-regulation of sodium/potassium-exchanging ATPase activity","type":"exact"},{"name":"up-regulation of sodium/potassium-transporting ATPase activity","type":"exact"},{"name":"up-regulation of sodium:potassium exchanging ATPase activity","type":"exact"},{"name":"up-regulation of sodium:potassium-exchanging ATPase activity","type":"exact"},{"name":"upregulation of (Na+ + K+)-ATPase activity","type":"exact"},{"name":"upregulation of (Na+ + K+)-activated ATPase activity","type":"exact"},{"name":"upregulation of ATP phosphohydrolase (Na+/K+-exchanging)","type":"exact"},{"name":"upregulation of Na(+)/K(+)-ATPase activity","type":"exact"},{"name":"upregulation of Na(+)/K(+)-exchanging ATPase activity","type":"exact"},{"name":"upregulation of Na+,K+ pump","type":"related"},{"name":"upregulation of Na+,K+-ATPase activity","type":"exact"},{"name":"upregulation of Na+/K+-ATPase activity","type":"exact"},{"name":"upregulation of Na+/K+-exchanging ATPase activity","type":"exact"},{"name":"upregulation of Na,K-activated ATPase activity","type":"exact"},{"name":"upregulation of Na,K-pump","type":"related"},{"name":"upregulation of sodium/potassium-exchanging ATPase activity","type":"exact"},{"name":"upregulation of sodium/potassium-transporting ATPase activity","type":"exact"},{"name":"upregulation of sodium:potassium exchanging ATPase activity","type":"exact"},{"name":"upregulation of sodium:potassium-exchanging ATPase activity","type":"exact"}],"termid":"GO:1903408"}


id: GO:0016811
data:
  {"annotated_genes":["SJAG_00450","SJAG_02766","SJAG_01987","SJAG_00476","SJAG_00811","SJAG_04186","SJAG_03227","SJAG_03844","SJAG_00581","SJAG_03627","SJAG_02721","SJAG_00691","SJAG_03013","SJAG_01416","SJAG_04039","SJAG_02618","SJAG_01075","SJAG_02276","SJAG_04467","SJAG_05287","SJAG_03775","SJAG_00392","SJAG_01231","SJAG_00964","SJAG_04939"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84598,107510],"is_not":false,"summary":null,"term":"GO:0016811"},{"annotations":[110755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043530"},{"annotations":[87820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004099"},{"annotations":[113374,106466,88873,89476,107140],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004359"},{"annotations":[93287,105517,108172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004407"},{"annotations":[100257,108173,105518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031078"},{"annotations":[100258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990162"},{"annotations":[100259,105519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032129"},{"annotations":[105520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140937"},{"annotations":[100260,105521,93288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034739"},{"annotations":[105522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180033"},{"annotations":[105523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180032"},{"annotations":[59036,96403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043864"},{"annotations":[97662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000225"},{"annotations":[86120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032041"},{"annotations":[86121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140765"},{"annotations":[100262,110487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046969"},{"annotations":[100263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046970"},{"annotations":[105670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008936"},{"annotations":[91011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050152"},{"annotations":[100785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000224"},{"annotations":[66686,103011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008418"},{"annotations":[77320,103012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070773"},{"annotations":[87501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009039"},{"annotations":[87825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004848"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00450":null,"SJAG_00476":null,"SJAG_00581":null,"SJAG_00691":null,"SJAG_00811":null,"SJAG_00964":null,"SJAG_01075":null,"SJAG_01231":null,"SJAG_01416":null,"SJAG_01987":null,"SJAG_02276":null,"SJAG_02618":null,"SJAG_02721":null,"SJAG_02766":null,"SJAG_03013":null,"SJAG_03227":null,"SJAG_03627":null,"SJAG_03775":null,"SJAG_03844":null,"SJAG_04039":null,"SJAG_04186":null,"SJAG_04467":null,"SJAG_04939":null,"SJAG_05287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:3.5.1.-","Reactome:R-HSA-9673054","Reactome:R-HSA-9673053"],"termid":"GO:0016811","terms_by_termid":{"GO:0000224":null,"GO:0000225":null,"GO:0004099":null,"GO:0004359":null,"GO:0004407":null,"GO:0004848":null,"GO:0008418":null,"GO:0008936":null,"GO:0009039":null,"GO:0016811":null,"GO:0031078":null,"GO:0032041":null,"GO:0032129":null,"GO:0034739":null,"GO:0043530":null,"GO:0043864":null,"GO:0046969":null,"GO:0046970":null,"GO:0050152":null,"GO:0070773":null,"GO:0140765":null,"GO:0140937":null,"GO:0180032":null,"GO:0180033":null,"GO:1990162":null}}


id: GO:0007003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete telomere binding (obsolete GO:0007003)","synonyms":[{"name":"telomere binding","type":"exact"}],"termid":"GO:0007003"}


id: GO:0051625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of epinephrine into a cell, typically presynaptic neurons or glial cells. Epinephrine is a hormone produced by the medulla of the adrenal glands that increases heart activity, improves the power and prolongs the action of muscles, and increases the rate and depth of breathing. It is synthesized by the methylation of norepinephrine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"epinephrine uptake","synonyms":[{"name":"adrenaline reuptake","type":"exact"},{"name":"adrenaline uptake","type":"exact"},{"name":"epinephrine import","type":"exact"},{"name":"epinephrine reuptake","type":"exact"}],"termid":"GO:0051625"}


id: FYPO:0003862
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of oxidation of one or more specific proteins, or of specific protein sites, is increased, resulting in the accumulation of proteins with oxidative modifications including carbonylated proteins, in cells in a population in stationary phase.","definition_xrefs":["PomBase:mah","PMID:17986764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein oxidation","termid":"FYPO:0003863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0002494","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased protein oxidation in stationary phase","synonyms":[{"name":"accumulation of carbonylated proteins in stationary phase","type":"related"},{"name":"increased level of disulfides in stationary phase","type":"related"},{"name":"increased level of oxidised thiols in proteins in stationary phase","type":"related"},{"name":"increased level of oxidized protein thiols in stationary phase","type":"related"}],"termid":"FYPO:0003862"}


id: GO:0102360
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose(2-) + 7,8-dihydroxycoumarin = UDP(3-) + 3-O-beta-D-glucosyl-daphnetin + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete daphnetin 3-O-glucosyltransferase activity (obsolete GO:0102360)","termid":"GO:0102360"}


id: PBO:0017753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex, platform subcomplex scaffold subunit Apc4/Cut20","termid":"PBO:0017753"}


id: GO:0071568
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of UFM1 from one protein to another via the reaction X-UFM1 + Y = Y-UFM1 + X, where both X-UFM1 and Y-UFM1 are covalent linkages.","definition_xrefs":["PMID:20018847","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein transferase activity","termid":"GO:0019787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0019787","GO:0016740","GO:0003824","GO:0140096","GO:0016746"],"is_obsolete":false,"name":"UFM1 transferase activity","termid":"GO:0071568"}


id: PBO:0085334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylserine decarboxylase of the mitochondrial inner membrane; converts phosphatidylserine to phosphatidylethanolamine; regulates mitochondrial fusion and morphology; partly exposed to the mitochondrial intermembrane space; ER-localized fraction is involved in formation of lipid droplets; autocatalytically processed","termid":"PBO:0085334"}


id: PBO:0081710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 629","termid":"PBO:0081710"}


id: PBO:0028256
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_ornithine_carbamoyltransferase_activity","termid":"PBO:0028256"}


id: FYPO:0007806
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the activity of a endodeoxyribonuclease activator is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0140656","PMID:33836577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal molecular function","termid":"FYPO:0000706"},{"relation_name":"is_a","term_name":"catalytic activity regulator phenotype","termid":"FYPO:0007690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal endodeoxyribonuclease activator activity","termid":"FYPO:0007806"}


id: PR:Q09883
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spn6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin homolog spn6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC188.12","synonyms":[{"name":"Spom972h-spn6","type":"exact"}],"termid":"PR:Q09883"}


id: GO:0009628
data:
  {"annotated_genes":["SJAG_02091","SJAG_00208","SJAG_04055","SJAG_00863","SJAG_00661","SJAG_05197","SJAG_02381","SJAG_02883","SJAG_03345","SJAG_01010","SJAG_04877","SJAG_02342","SJAG_02258","SJAG_01262","SJAG_01084","SJAG_02426","SJAG_04726","SJAG_02592","SJAG_00814","SJAG_00729","SJAG_02182","SJAG_04668","SJAG_02334","SJAG_02199","SJAG_01584","SJAG_04567","SJAG_02200","SJAG_01186","SJAG_04150","SJAG_01648","SJAG_02266","SJAG_02818","SJAG_03893","SJAG_04082","SJAG_04187","SJAG_00596","SJAG_03898","SJAG_00409","SJAG_03319","SJAG_03815","SJAG_01585","SJAG_04388","SJAG_03185","SJAG_00221","SJAG_04018","SJAG_03527","SJAG_04190","SJAG_02828","SJAG_04205","SJAG_00272","SJAG_03949","SJAG_01150","SJAG_00642","SJAG_05242","SJAG_04791","SJAG_02860","SJAG_00436"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009785"},{"annotations":[100381,100271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070370"},{"annotations":[88450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071474"},{"annotations":[115247,115248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071483"},{"annotations":[85577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071473"},{"annotations":[86868,92543,96593,84907,101037,91755,101323,88133,106052,106053,111566,111565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034605"},{"annotations":[97277,105900,113059,107772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071456"},{"annotations":[92033,98857,100585,113150,110527,102543,87935,90423,112357,106394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071470"},{"annotations":[96231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071472"},{"annotations":[86869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071502"},{"annotations":[104499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050982"},{"annotations":[100976,98891,105162,91296],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904161"},{"annotations":[112492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"},{"annotations":[85327,112468],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1900039"},{"annotations":[100054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009314"},{"annotations":[91117,108890,89715,84083,90024,93192,92079,85643,100293,101985,103035,91330,108337,107482,106879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070914"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abiotic (not derived from living organisms) stimulus.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":57,"genes_by_uniquename":{"SJAG_00208":null,"SJAG_00221":null,"SJAG_00272":null,"SJAG_00409":null,"SJAG_00436":null,"SJAG_00596":null,"SJAG_00642":null,"SJAG_00661":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_01010":null,"SJAG_01084":null,"SJAG_01150":null,"SJAG_01186":null,"SJAG_01262":null,"SJAG_01584":null,"SJAG_01585":null,"SJAG_01648":null,"SJAG_02091":null,"SJAG_02182":null,"SJAG_02199":null,"SJAG_02200":null,"SJAG_02258":null,"SJAG_02266":null,"SJAG_02334":null,"SJAG_02342":null,"SJAG_02381":null,"SJAG_02426":null,"SJAG_02592":null,"SJAG_02818":null,"SJAG_02828":null,"SJAG_02860":null,"SJAG_02883":null,"SJAG_03185":null,"SJAG_03319":null,"SJAG_03345":null,"SJAG_03527":null,"SJAG_03815":null,"SJAG_03893":null,"SJAG_03898":null,"SJAG_03949":null,"SJAG_04018":null,"SJAG_04055":null,"SJAG_04082":null,"SJAG_04150":null,"SJAG_04187":null,"SJAG_04190":null,"SJAG_04205":null,"SJAG_04388":null,"SJAG_04567":null,"SJAG_04668":null,"SJAG_04726":null,"SJAG_04791":null,"SJAG_04877":null,"SJAG_05197":null,"SJAG_05242":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to abiotic stimulus","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:23873862":null},"synonyms":[{"name":"response to abiotic stress","type":"narrow"}],"termid":"GO:0009628","terms_by_termid":{"GO:0009314":null,"GO:0009785":null,"GO:0031990":null,"GO:0034605":null,"GO:0050982":null,"GO:0070370":null,"GO:0070914":null,"GO:0071456":null,"GO:0071470":null,"GO:0071472":null,"GO:0071473":null,"GO:0071474":null,"GO:0071483":null,"GO:0071502":null,"GO:1900039":null,"GO:1904161":null}}


id: GO:0032096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a response to a food stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to food","termid":"GO:0032095"},{"relation_name":"is_a","term_name":"negative regulation of response to nutrient levels","termid":"GO:0032108"},{"relation_name":"negatively_regulates","term_name":"response to food","termid":"GO:0032094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to food","synonyms":[{"name":"down regulation of response to food","type":"exact"},{"name":"down-regulation of response to food","type":"exact"},{"name":"downregulation of response to food","type":"exact"},{"name":"inhibition of response to food","type":"narrow"}],"termid":"GO:0032096"}


id: PBO:0053267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin like receptor A1","termid":"PBO:0053267"}


id: PBO:0054285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1676","termid":"PBO:0054285"}


id: GO:0050921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of a motile cell or organism in response to a specific chemical concentration gradient.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"is_a","term_name":"positive regulation of locomotion","termid":"GO:0040017"},{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"positively_regulates","term_name":"chemotaxis","termid":"GO:0006935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chemotaxis","synonyms":[{"name":"activation of chemotaxis","type":"narrow"},{"name":"stimulation of chemotaxis","type":"narrow"},{"name":"up regulation of chemotaxis","type":"exact"},{"name":"up-regulation of chemotaxis","type":"exact"},{"name":"upregulation of chemotaxis","type":"exact"}],"termid":"GO:0050921"}


id: GO:0140684
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a tri or a dimethyl-lysine residue at position 9 of the histone H3 protein. This is a dioxygenase reaction that is dependent on Fe(II) and 2-oxoglutarate.","definition_xrefs":["PMID:20531378","PMID:20208542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"histone H3K9 demethylase activity","termid":"GO:0032454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0032452","GO:0003824","GO:0140096","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"histone H3K9me2/H3K9me3 demethylase activity","secondary_identifiers":["RHEA:60200","EC:1.14.11.66"],"synonyms":[{"name":"histone H3-tri/dimethyl-lysine-9 demethylase activity","type":"exact"},{"name":"histone H3K9me2 demethylase activity","type":"broad"},{"name":"histone H3K9me3 demethylase activity","type":"related"}],"termid":"GO:0140684"}


id: PBO:0075377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 14","termid":"PBO:0075377"}


id: PBO:0063169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAX interacting protein 1","termid":"PBO:0063169"}


id: PBO:0053732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 951","termid":"PBO:0053732"}


id: PBO:0071364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 23","termid":"PBO:0071364"}


id: PBO:0081598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 519 pseudogene 4","termid":"PBO:0081598"}


id: PBO:0112605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein, implicated in transmembrane transport or endocytosis","termid":"PBO:0112605"}


id: PR:O74830
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1183.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase C1183.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.02","synonyms":[{"name":"Spom972h-SPCC1183.02","type":"exact"}],"termid":"PR:O74830"}


id: GO:0071232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a histidine stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"response to histidine","termid":"GO:0080052"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to histidine","termid":"GO:0071232"}


id: GO:0018905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dimethyl ether, CH3-O-CH3, the simplest ether. Dimethyl ether, also known wood ether and methyl ether, is a colorless gas that has been used in refrigeration applications.","definition_xrefs":["UM-BBD_pathwayID:dme"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dimethyl ether metabolic process","synonyms":[{"name":"dimethyl ether metabolism","type":"exact"},{"name":"methyl ether metabolic process","type":"exact"},{"name":"methyl ether metabolism","type":"exact"}],"termid":"GO:0018905"}


id: GO:0062003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency or rate of all-trans-retinyl-ester hydrolase, 11-cis retinol forming activity.","definition_xrefs":["PMID:23407971"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hydrolase activity","termid":"GO:0051346"},{"relation_name":"is_a","term_name":"regulation of all-trans-retinyl-ester hydrolase, 11-cis retinol forming activity","termid":"GO:0062002"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of all-trans-retinyl-ester hydrolase, 11-cis retinol forming activity","termid":"GO:0062003"}


id: PBO:0069081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 328, pseudogene","termid":"PBO:0069081"}


id: PBO:0058362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4734","termid":"PBO:0058362"}


id: GO:0060828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the Wnt signaling pathway through beta-catenin, the series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Wnt signaling pathway","termid":"GO:0030111"},{"relation_name":"regulates","term_name":"canonical Wnt signaling pathway","termid":"GO:0060070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of canonical Wnt signaling pathway","secondary_identifiers":["GO:0035411","GO:0035412"],"synonyms":[{"name":"catenin import into nucleus","type":"narrow"},{"name":"regulation of Wnt receptor signaling pathway through beta-catenin","type":"exact"},{"name":"regulation of canonical Wnt receptor signaling pathway","type":"exact"},{"name":"regulation of canonical Wnt receptor signalling pathway","type":"exact"},{"name":"regulation of canonical Wnt-activated signaling pathway","type":"exact"},{"name":"regulation of catenin import into nucleus","type":"narrow"},{"name":"regulation of catenin protein nuclear translocation","type":"narrow"}],"termid":"GO:0060828"}


id: PBO:0060463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NALCN antisense RNA 1","termid":"PBO:0060463"}


id: FYPO:0005790
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is curved along the long axis to form a \\\"J\\\" shape. In a curved cell, the long axis follows a smooth bend rather than a straight line. In a J-shaped cell, the curve is centered away from the midpoint of the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved vegetative cell","termid":"FYPO:0000016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000005","FYPO:0001320"],"is_obsolete":false,"name":"J-shaped vegetative cell","synonyms":[{"name":"J-shaped cell","type":"exact"},{"name":"J-shaped cell during vegetative growth","type":"exact"},{"name":"J-shaped vegetative cell during mitotic cell cycle","type":"related"},{"name":"cell morphology, J-shaped","type":"exact"}],"termid":"FYPO:0005790"}


id: GO:0035100
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 20-hydroxyecdysone (ecdysone). Ecdysone is an ecdysteroid produced by the prothoracic glands of immature insects and the ovaries of adult females, which stimulates growth and molting.","definition_xrefs":["ISBN:0198506732","GOC:bf","ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol binding","termid":"GO:0032934"},{"relation_name":"is_a","term_name":"hormone binding","termid":"GO:0042562"},{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008289","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ecdysone binding","termid":"GO:0035100"}


id: FYPO:0002009
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the amount of oxygen consumed by cells in a given time is lower than in wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased oxygen consumption during vegetative growth","synonyms":[{"name":"decreased oxygen consumption during mitotic cell cycle","type":"related"},{"name":"decreased oxygen uptake during vegetative growth","type":"related"},{"name":"reduced oxygen consumption during vegetative growth","type":"exact"}],"termid":"FYPO:0002009"}


id: PBO:0049847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEAT repeat containing 9","termid":"PBO:0049847"}


id: PATO:0000679
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000679 temporal value (obsolete PATO:0000679)","termid":"PATO:0000679"}


id: GO:0018875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving benzoate, the anion of benzoic acid (benzenecarboxylic acid) that occur in the absence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzoate metabolic process","termid":"GO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"anaerobic benzoate metabolic process","secondary_identifiers":["UM-BBD_pathwayID:benz","MetaCyc:CENTBENZCOA-PWY"],"synonyms":[{"name":"anaerobic benzoate metabolism","type":"exact"}],"termid":"GO:0018875"}


id: GO:0034658
data:
  {"annotated_genes":["SJAG_00671"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84485],"is_not":false,"summary":null,"term":"GO:0034658"}]},"cv_name":"molecular_function","definition":"Enables the transfer of isopropylmalate from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"isopropylmalate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034658","terms_by_termid":{"GO:0034658":null}}


id: GO:0032218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of riboflavin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Riboflavin (vitamin B2) is a water-soluble B-complex vitamin, converted in the cell to FMN and FAD, cofactors required for the function of flavoproteins.","definition_xrefs":["GOC:rn","PMID:16204239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"vitamin transport","termid":"GO:0051180"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"riboflavin transport","termid":"GO:0032218"}


id: PBO:0082772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the spindle pole body outer plaque; required for spindle orientation and mitotic nuclear migration; CNM67 has a paralog, ADY3, that arose from the whole genome duplication","termid":"PBO:0082772"}


id: PBO:0001503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine ribohydrolase (predicted)","termid":"PBO:0001503"}


id: GO:0070020
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that consists of a dimeric transforming growth factor beta (TGF-beta) type II receptor bound to a TGF-beta1 dimer.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta1-type II receptor complex (obsolete GO:0070020)","synonyms":[{"name":"TGF-beta receptor II-TGF-beta1 complex","type":"exact"},{"name":"TGF-beta1-type II receptor complex","type":"exact"}],"termid":"GO:0070020"}


id: PBO:0078966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (AGA) 5-1","termid":"PBO:0078966"}


id: GO:0047156
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribose 5-phosphate + acetoin = 1-deoxy-D-altro-heptulose 7-phosphate + acetaldehyde.","definition_xrefs":["RHEA:21504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transketolase or transaldolase activity","termid":"GO:0016744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016744"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016744"],"is_obsolete":false,"name":"acetoin-ribose-5-phosphate transaldolase activity","secondary_identifiers":["MetaCyc:2.2.1.4-RXN","EC:2.2.1.4","KEGG_REACTION:R02345"],"synonyms":[{"name":"1-deoxy-D-altro-heptulose-7-phosphate synthase activity","type":"related"},{"name":"1-deoxy-D-altro-heptulose-7-phosphate synthetase activity","type":"related"},{"name":"3-hydroxybutan-2-one:D-ribose-5-phosphate aldehydetransferase activity","type":"related"},{"name":"3-hydroxybutan-3-one:D-ribose-5-phosphate aldehydetransferase activity","type":"related"}],"termid":"GO:0047156"}


id: GO:1902954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of early endosome to recycling endosome transport.","definition_xrefs":["PMID:22621900","GOC:sjp","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of vesicle-mediated transport","termid":"GO:0060627"},{"relation_name":"regulates","term_name":"early endosome to recycling endosome transport","termid":"GO:0061502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"regulation of early endosome to recycling endosome transport","termid":"GO:1902954"}


id: PBO:0058253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4540","termid":"PBO:0058253"}


id: PATO:0000466
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000466 none (obsolete PATO:0000466)","termid":"PATO:0000466"}


id: PBO:0008536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl pyrophosphate Man7GlcNAc2 alpha-1,6-mannosyltransferase Alg12 (predicted)","termid":"PBO:0008536"}


id: PBO:0064671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 6","termid":"PBO:0064671"}


id: GO:0071430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a ribonucleoprotein complex that contains pre-microRNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:sl","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete pre-miRNA-containing ribonucleoprotein complex export from nucleus (obsolete GO:0071430)","synonyms":[{"name":"pre-microRNA-containing RNP export from nucleus","type":"exact"},{"name":"pre-microRNA-containing ribonucleoprotein complex export from cell nucleus","type":"exact"},{"name":"pre-microRNA-containing ribonucleoprotein complex export from nucleus","type":"exact"},{"name":"pre-microRNA-containing ribonucleoprotein complex nucleus export","type":"exact"},{"name":"pre-microRNA-containing ribonucleoprotein complex transport from nucleus to cytoplasm","type":"exact"}],"termid":"GO:0071430"}


id: SO:0000371
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transposon that encodes function required for conjugation.","direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_transposon","termid":"SO:0000182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conjugative_transposon","synonyms":[{"name":"conjugative transposon","type":"exact"}],"termid":"SO:0000371"}


id: PR:P78946
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl26 gene.","definition_xrefs":["UniProtKB:P78946","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L26 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29B5.03c","synonyms":[{"name":"Spom972h-rpl26","type":"exact"}],"termid":"PR:P78946"}


id: PBO:0060768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B4 pseudogene 12","termid":"PBO:0060768"}


id: PBO:0053153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase B pseudogene 2","termid":"PBO:0053153"}


id: GO:0015739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of sialic acid into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"sialic acid transport","termid":"GO:0015739"}


id: GO:0060007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A vestibular reflex by which a response to a linear acceleration stimulus begins with an afferent nerve impulse from a receptor in the otolith and ends with the compensatory action of eye muscles. Signaling never reaches a level of consciousness.","definition_xrefs":["PMID:11784757","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vestibular reflex","termid":"GO:0060005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"linear vestibuloocular reflex","termid":"GO:0060007"}


id: GO:0100033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates fungal-type cell wall biogenesis.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of fungal-type cell wall biogenesis by transcription from RNA polymerase II promoter (obsolete GO:0100033)","termid":"GO:0100033"}


id: FYPO:0006155
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more mating mRNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Mating genes are normally transcribed during conjugation with cellular fusion (i.e. mating).","definition_xrefs":["PMID:19056896","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased level of mating gene mRNA during vegetative growth","synonyms":[{"name":"increased level of conjugation gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of mating gene RNA during vegetative growth","type":"exact"},{"name":"increased level of mating gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of mating gene transcripts during vegetative growth","type":"exact"},{"name":"increased level of mating with cellular fusion gene mRNA during vegetative growth","type":"exact"},{"name":"increased mating gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0006155"}


id: GO:0170039
data:
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id: PBO:0084294
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id: PBO:0109204
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id: PBO:0018157
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id: PBO:0075573
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id: GO:0046547
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id: SO:0002055
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id: PBO:0061569
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id: PBO:0000316
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id: GO:0043210
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id: MOD:01368
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id: PBO:0086205
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id: PBO:0089915
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIIB complex subunit Bdp1","termid":"PBO:0089915"}


id: GO:0048791
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id: PBO:0058799
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id: MOD:01122
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id: GO:0035960
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id: PBO:0071529
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id: PBO:0073982
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id: GO:0052496
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id: PBO:0055913
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37A","termid":"PBO:0055913"}


id: PBO:0080841
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id: FYPO:0004888
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the telomere of a chromosome is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromosome","termid":"FYPO:0004996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to telomere","synonyms":[{"name":"abnormal protein localisation to chromosome, telomeric region","type":"exact"},{"name":"abnormal protein localisation to telomere","type":"exact"},{"name":"abnormal protein localization to chromosome, telomeric region","type":"exact"}],"termid":"FYPO:0004888"}


id: PR:Q9UTB6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sds3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTB6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional regulatory protein sds3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.02","synonyms":[{"name":"Spom972h-sds3","type":"exact"},{"name":"clr6 histone deacetylase complex I subunit Sds3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTB6"}


id: PBO:0003895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex subunit Iki1 (predicted)","termid":"PBO:0003895"}


id: FYPO:0009053
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing L-glutamate as the nitrogen source.","definition_xrefs":["PMID:34984977","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002057","FYPO:0000003","FYPO:0002058","FYPO:0001985","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"decreased cell population growth on glutamate nitrogen source","synonyms":[{"name":"decreased growth on glutamate nitrogen source","type":"broad"},{"name":"decreased vegetative cell growth on glutamate nitrogen source","type":"exact"},{"name":"growth defect, slow growth with glutamate nitrogen source","type":"related"},{"name":"reduced cell growth on glutamate nitrogen source","type":"related"},{"name":"slow cell growth on glutamate nitrogen source","type":"narrow"}],"termid":"FYPO:0009053"}


id: PBO:0063962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4-phosphate 5-kinase like 1","termid":"PBO:0063962"}


id: FYPO:0001150
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to methylamine. Cells stop growing (and may die) at a concentration of methylamine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0002683","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to methylamine","synonyms":[{"name":"hypersensitive to methylamine","type":"exact"},{"name":"sensitive to methylamine during mitotic cell cycle","type":"related"},{"name":"sensitive to methylamine during vegetative growth","type":"exact"}],"termid":"FYPO:0001150"}


id: PBO:0058152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4447","termid":"PBO:0058152"}


id: PBO:0068007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 309","termid":"PBO:0068007"}


id: PR:Q9UUM2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swi1 gene.","definition_xrefs":["UniProtKB:Q9UUM2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type switching protein swi1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC216.06c","synonyms":[{"name":"Spom972h-swi1","type":"exact"},{"name":"replication fork protection complex subunit swi1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUM2"}


id: GO:0019031
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer of a virion that surrounds the protein capsid. May also contain glycoproteins.","definition_xrefs":["GOC:jl","ISBN:0781718325","Wikipedia:Viral_envelope","GOC:bf","GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral membrane","termid":"GO:0036338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral envelope","synonyms":[{"name":"viral glycoprotein","type":"related"},{"name":"viral outside membrane","type":"exact"}],"termid":"GO:0019031"}


id: PR:O42887
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC8E4.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agmatinase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8E4.03","synonyms":[{"name":"AUH 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC8E4.03","type":"exact"},{"name":"agmatine ureohydrolase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42887"}


id: PBO:0044088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 45 member A8","termid":"PBO:0044088"}


id: GO:0150007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Clathrin-dependent endocytosis of presynaptic membrane regions comprising synaptic vesicles' membrane constituents. This is a relatively slow process occurring in the range of tens of seconds.","definition_xrefs":["PMID:26430111","GOC:ha","GOC:bc","PMID:16982422","PMID:27252645","PMID:18579748","PMID:4348786","PMID:28391090","PMID:18579735","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"},{"relation_name":"is_a","term_name":"synaptic vesicle endocytosis","termid":"GO:0048488"},{"relation_name":"is_a","term_name":"clathrin-dependent endocytosis","termid":"GO:0072583"},{"relation_name":"part_of","term_name":"synaptic vesicle recycling via endosome","termid":"GO:0036466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"clathrin-dependent synaptic vesicle endocytosis","termid":"GO:0150007"}


id: FYPO:0000560
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which re-entry into the mitotic cell cycle after pheromone arrest is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal re-entry into mitotic cell cycle after pheromone arrest","synonyms":[{"name":"normal recovery from pheromone-induced cell cycle arrest","type":"exact"},{"name":"recovery from pheromone-induced cell cycle arrest: normal","type":"related"}],"termid":"FYPO:0000560"}


id: PATO:0000068
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"quality","termid":"PATO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"qualitative","termid":"PATO:0000068"}


id: GO:0003345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The coordinated movement of a mesenchymal proepicardial cell to the surface of the developing heart.","definition_xrefs":["PMID:18722343","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in heart development","termid":"GO:0060973"},{"relation_name":"part_of","term_name":"pericardium morphogenesis","termid":"GO:0003344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proepicardium cell migration involved in pericardium morphogenesis","termid":"GO:0003345"}


id: PATO:0000708
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A threshold which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"threshold","termid":"PATO:0000152"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased threshold","secondary_identifiers":["PATO:0000707"],"synonyms":[{"name":"low threshold","type":"exact"}],"termid":"PATO:0000708"}


id: PBO:0003783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-FYVE type zinc finger protein","termid":"PBO:0003783"}


id: PR:O14284
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug63 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidation resistance protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.16c","synonyms":[{"name":"Spom972h-mug63","type":"exact"},{"name":"meiotically up-regulated gene 63 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14284"}


id: GO:0042937
data:
  {"annotated_genes":["SJAG_01983","SJAG_03577","SJAG_01660"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99078],"is_not":false,"summary":null,"term":"GO:0042937"},{"annotations":[109201,91589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034634"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a tripeptide, a compound containing three amino acids linked together by peptide bonds, from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide transmembrane transporter activity","termid":"GO:0035673"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01660":null,"SJAG_01983":null,"SJAG_03577":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"tripeptide transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tripeptide transporter activity","type":"related"}],"termid":"GO:0042937","terms_by_termid":{"GO:0034634":null,"GO:0042937":null}}


id: GO:0008612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-lysine to form hypusine, peptidyl-N6-(4-amino-2-hydroxybutyl)-L-lysine.","definition_xrefs":["GOC:ma","ISBN:0198547684","RESID:AA0116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"},{"relation_name":"is_a","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine modification to peptidyl-hypusine","secondary_identifiers":["GO:0046515"],"synonyms":[{"name":"hypusine anabolism","type":"exact"},{"name":"hypusine anabolism from peptidyl-lysine","type":"exact"},{"name":"hypusine biosynthesis","type":"exact"},{"name":"hypusine biosynthetic process","type":"exact"},{"name":"hypusine biosynthetic process from peptidyl-lysine","type":"exact"},{"name":"hypusine formation","type":"exact"},{"name":"hypusine formation from peptidyl-lysine","type":"exact"},{"name":"hypusine synthesis","type":"exact"},{"name":"hypusine synthesis from peptidyl-lysine","type":"exact"},{"name":"hypusinylation","type":"exact"},{"name":"protein hypusination","type":"exact"}],"termid":"GO:0008612"}


id: PBO:0044989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAH-box helicase 40 pseudogene 1","termid":"PBO:0044989"}


id: GO:1990230
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of catalyzing the transfer of an iron-sulfur (Fe-S) cluster from one compound (donor) to another (acceptor), which may be a target protein or another Fe-S assembly complex. In humans, it consists of HSPA9, HSCB, GLRX5, ABCB7 and GFER.","definition_xrefs":["PMID:34660592","GOC:bhm","PMID:19810706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"iron-sulfur cluster transfer complex","synonyms":[{"name":"Fe-S cluster transfer complex","type":"exact"},{"name":"IscA complex","type":"narrow"},{"name":"SufA complex","type":"narrow"},{"name":"SufA dimer","type":"narrow"}],"termid":"GO:1990230"}


id: PBO:0038814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 20 pseudogene 1","termid":"PBO:0038814"}


id: PBO:0065291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired related homeobox 1","termid":"PBO:0065291"}


id: PR:Q9UUI7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22F8.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUI7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha,alpha-trehalose-phosphate synthase [UDP-forming] 100 kDa subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F8.05","synonyms":[{"name":"Spom972h-SPAC22F8.05","type":"exact"},{"name":"UDP-glucose-glucosephosphate glucosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"trehalose-6-phosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUI7"}


id: PBO:0082475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-dependent protein kinase catalytic subunit; promotes vegetative growth in response to nutrients via the Ras-cAMP signaling pathway; partially redundant with Tpk1p and Tpk3p; localizes to P-bodies during stationary phase; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0082475"}


id: PBO:0050741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 3","termid":"PBO:0050741"}


id: MOD:00405
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct of a cysteine residue with the Applied Biosystems original isotope-coded affinity tag d8 reagent.","definition_xrefs":["Unimod:12#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium tagged reagent","termid":"MOD:01431"},{"relation_name":"is_a","term_name":"isotope tagged sufhydryl reagent modified cysteine","termid":"MOD:01820"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Applied Biosystems original ICAT(TM) d8 modified cysteine","synonyms":[{"name":"Applied Biosystems original ICAT(TM) d8","type":"related"},{"name":"ICAT-D:2H(8)","type":"related"}],"termid":"MOD:00405"}


id: PBO:0060858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIMA related kinase 4","termid":"PBO:0060858"}


id: GO:0014003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of an oligodendrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. An oligodendrocyte is a type of glial cell involved in myelinating the axons in the central nervous system.","definition_xrefs":["GOC:ef","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell development","termid":"GO:0021782"},{"relation_name":"part_of","term_name":"oligodendrocyte differentiation","termid":"GO:0048709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oligodendrocyte development","synonyms":[{"name":"oligodendrocyte cell development","type":"exact"}],"termid":"GO:0014003"}


id: PBO:0046618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group V member 1, envelope","termid":"PBO:0046618"}


id: PBO:0071825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 20","termid":"PBO:0071825"}


id: PR:O42649
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A structural maintenance of chromosomes protein 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR18937:SF8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.09c","secondary_identifiers":["UniProtKB:O42649"],"synonyms":[{"name":"SPAC10F6.09c","type":"related"},{"name":"Spom972h-SMC3","type":"exact"},{"name":"cohesin complex Psm3 subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"smc3","type":"related"}],"termid":"PR:O42649"}


id: GO:0000741
data:
  {"annotated_genes":["SJAG_01370","SJAG_02045","SJAG_01613","SJAG_02286","SJAG_02737","SJAG_04936","SJAG_00810"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95280,84594,107524,83833,87438,87048,113019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000742"},{"annotations":[84595],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048288"}]},"cv_name":"biological_process","definition":"The creation of a single nucleus from multiple nuclei as a result of fusing the lipid bilayers that surround each nuclei.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus organization","termid":"GO:0006997"},{"relation_name":"is_a","term_name":"organelle fusion","termid":"GO:0048284"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00810":null,"SJAG_01370":null,"SJAG_01613":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02737":null,"SJAG_04936":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"karyogamy","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0007335","Wikipedia:Karyogamy"],"synonyms":[{"name":"nuclear fusion","type":"exact"},{"name":"nuclear fusion during karyogamy","type":"exact"}],"termid":"GO:0000741","terms_by_termid":{"GO:0000742":null,"GO:0048288":null}}


id: PBO:0049747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin subunit theta 1","termid":"PBO:0049747"}


id: PBO:0087012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribonuclease H2 subunit; required for RNase H2 activity; role in ribonucleotide excision repair; related to human AGS3 that causes Aicardi-Goutieres syndrome","termid":"PBO:0087012"}


id: PBO:0091392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, LTR proximal","termid":"PBO:0091392"}


id: GO:0036202
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ent-cassa-12,15-diene + O2 + NADPH + H+ = ent-11beta-hydroxycassa-12,15-diene + NADP+ + H2O.","definition_xrefs":["EC:1.14.14.112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ent-cassa-12,15-diene 11-hydroxylase activity","secondary_identifiers":["RHEA:31967","KEGG_REACTION:R09866"],"synonyms":[{"name":"ent-cassadiene C11alpha-hydroxylase activity","type":"related"}],"termid":"GO:0036202"}


id: GO:0048927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a posterior lateral line neuromast support cell. Support cells are non-sensory cells of the neuromast that extend between the sensory hair cells from the basement membrane to the apical surface; they are surrounded by mantle cells.","definition_xrefs":["ISBN:0387968377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast support cell differentiation","termid":"GO:0048889"},{"relation_name":"part_of","term_name":"posterior lateral line neuromast development","termid":"GO:0048919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line neuromast support cell differentiation","termid":"GO:0048927"}


id: PBO:0061797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ODC1 divergent transcript","termid":"PBO:0061797"}


id: PBO:0072233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 8","termid":"PBO:0072233"}


id: PBO:0113080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cysteine aminopeptidase with homocysteine-thiolactonase activity; protects cells against homocysteine toxicity; cytosolic protein, selectively transported to vacuole during nitrogen starvation; targeted to vacuole via CVT pathway; has bleomycin hydrolase activity in vitro; transcription is regulated by galactose via Gal4p; orthologous to human BLMH","termid":"PBO:0113080"}


id: PBO:0026675
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_regulation_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0026675"}


id: SO:0000650
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cytosolic SSU rRNA is an RNA component of the small subunit of cytosolic ribosomes.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"rRNA_small_subunit_primary_transcript","termid":"SO:0000255"},{"relation_name":"is_a","term_name":"cytosolic_rRNA","termid":"SO:0002343"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_SSU_rRNA","synonyms":[{"name":"cytosolic SSU rRNA","type":"exact"},{"name":"cytosolic SSU ribosomal RNA","type":"exact"},{"name":"cytosolic small subunit rRNA","type":"exact"}],"termid":"SO:0000650"}


id: PR:P0CT77
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1101 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT77"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L11-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.07c","synonyms":[{"name":"Spom972h-rpl1101","type":"exact"}],"termid":"PR:P0CT77"}


id: GO:0045010
data:
  {"annotated_genes":["SJAG_01384","SJAG_03086","SJAG_02245","SJAG_01964","SJAG_01268","SJAG_04100","SJAG_04479","SJAG_02228","SJAG_01732","SJAG_03455","SJAG_02075","SJAG_04624"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85435],"is_not":false,"summary":null,"term":"GO:0045010"},{"annotations":[99375,95744,95922,86734,94895,103213,84221,93981,98801,101208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034314"},{"annotations":[86932],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0034316"}]},"cv_name":"biological_process","definition":"The initial step in the formation of an actin filament, in which actin monomers combine to form a new filament. Nucleation is slow relative to the subsequent addition of more monomers to extend the filament.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament organization","termid":"GO:0007015"}],"gene_count":12,"genes_by_uniquename":{"SJAG_01268":null,"SJAG_01384":null,"SJAG_01732":null,"SJAG_01964":null,"SJAG_02075":null,"SJAG_02228":null,"SJAG_02245":null,"SJAG_03086":null,"SJAG_03455":null,"SJAG_04100":null,"SJAG_04479":null,"SJAG_04624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"actin nucleation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actin filament nucleation","type":"exact"}],"termid":"GO:0045010","terms_by_termid":{"GO:0034314":null,"GO:0034316":null,"GO:0045010":null}}


id: PBO:0060586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 25, pseudogene","termid":"PBO:0060586"}


id: PBO:0057118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 203a","termid":"PBO:0057118"}


id: PBO:0048661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol kinase 3","termid":"PBO:0048661"}


id: PBO:0057043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 133a-2","termid":"PBO:0057043"}


id: GO:0016564
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any transcription regulator activity that prevents or downregulates transcription.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription repressor activity (obsolete GO:0016564)","synonyms":[{"name":"negative transcriptional regulator activity","type":"exact"},{"name":"transcription repressor activity","type":"exact"},{"name":"transcriptional repressor activity","type":"exact"}],"termid":"GO:0016564"}


id: PBO:0003217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase subunit Sec11 (predicted)","termid":"PBO:0003217"}


id: GO:0120148
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structure in a host cell comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cytoskeleton","termid":"GO:0044163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell centrosome","synonyms":[{"name":"host centrosome","type":"exact"}],"termid":"GO:0120148"}


id: SO:0001642
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mathematically defined repeat (MDR) is a experimental feature that is determined by querying overlapping oligomers of length k against a database of shotgun sequence data and identifying regions in the query sequence that exceed a statistically determined threshold of repetitiveness.","definition_xrefs":["SO:jestill"],"direct_ancestors":[{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mathematically_defined_repeat","synonyms":[{"name":"mathematically defined repeat","type":"exact"}],"termid":"SO:0001642"}


id: GO:0003355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, self-propelled movement of cilia of inner ear epithelial cells, resulting the aggregation of otolith seed particles.","definition_xrefs":["GOC:krc","GOC:dph","PMID:19043402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cilium movement involved in extracellular fluid movement","termid":"GO:0003351"},{"relation_name":"part_of","term_name":"otolith formation","termid":"GO:0032475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"cilium movement involved in otolith formation","termid":"GO:0003355"}


id: GO:1901727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone deacetylase activity.","definition_xrefs":["PMID:20497126","GOC:BHF","GOC:rl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone deacetylase activity (obsolete GO:1901727)","synonyms":[{"name":"activation of histone deacetylase activity","type":"narrow"},{"name":"up regulation of histone deacetylase activity","type":"exact"},{"name":"up-regulation of histone deacetylase activity","type":"exact"},{"name":"upregulation of histone deacetylase activity","type":"exact"}],"termid":"GO:1901727"}


id: PBO:0051882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-3-phosphate synthase 1","termid":"PBO:0051882"}


id: GO:0034402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which proteins required for 3'-end transcript processing become associated with the RNA polymerase II holoenzyme complex and the 3' end of a transcript.","definition_xrefs":["PMID:18195044"],"gene_count":0,"genotype_count":0,"name":"obsolete recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex (obsolete GO:0034402)","termid":"GO:0034402"}


id: GO:0097160
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a polychlorinated biphenyl (PCB), a biphenyl compound containing between 2 and 10 chlorine atoms attached to the two benzene rings.","definition_xrefs":["GOC:sjw","PMID:7583672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"polychlorinated biphenyl binding","synonyms":[{"name":"PCB binding","type":"exact"},{"name":"polychlorobiphenyl binding","type":"exact"}],"termid":"GO:0097160"}


id: GO:0005206
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete heparin sulfate proteoglycan (obsolete GO:0005206)","synonyms":[{"name":"heparin sulfate proteoglycan","type":"exact"},{"name":"heparin sulphate proteoglycan","type":"exact"}],"termid":"GO:0005206"}


id: PR:Q10272
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 18 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00957","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-rRNA-processing protein crb3/ipi3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.08c","secondary_identifiers":["UniProtKB:Q10272"],"synonyms":[{"name":"Spom972h-WDR18","type":"exact"}],"termid":"PR:Q10272"}


id: PBO:0083280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; partially overlaps the essential gene UGP1 gene and uncharacterized ORF YKL037W","termid":"PBO:0083280"}


id: FYPO:0005366
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0002274","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein phosphorylation during mitosis","synonyms":[{"name":"abolished protein phosphorylation during M phase of mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during mitosis during vegetative growth","type":"exact"},{"name":"abolished protein phosphorylation during mitotic M phase","type":"related"},{"name":"protein phosphorylation abolished during mitosis","type":"exact"}],"termid":"FYPO:0005366"}


id: PBO:0017712
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana GRF2","termid":"PBO:0017712"}


id: PBO:0056543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCF.2 cell line derived transforming sequence-like 2","termid":"PBO:0056543"}


id: PBO:0045278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 29","termid":"PBO:0045278"}


id: PR:Q9P6P6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 39S ribosomal protein L3, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01133","PANTHER:PTHR11229:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L3-like mitochondrial ribosomal protein Mrpl9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.17c","secondary_identifiers":["UniProtKB:Q9P6P6"],"synonyms":[{"name":"54S ribosomal protein L9, mitochondrial (Schizosaccharomyces pombe 972h-)","type":"related"},{"name":"SPAC644.17c","type":"related"},{"name":"Spom972h-MRPL3","type":"exact"}],"termid":"PR:Q9P6P6"}


id: PBO:0045040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dyskerin pseudouridine synthase 1","termid":"PBO:0045040"}


id: GO:0061483
data:
  {"annotated_genes":["SJAG_00044"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84954],"is_not":false,"summary":null,"term":"GO:0061483"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: cysteine sulfanate + GTP + IMP = sulfinylpropanyl adenylate + GDP + 3 H+ + phosphate.","definition_xrefs":["GOC:dph","PMID:8346915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00044":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"sulfinylpropanyl adenylate synthase","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SPA synthase","type":"related"}],"termid":"GO:0061483","terms_by_termid":{"GO:0061483":null}}


id: GO:0070680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A tRNA aminoacylation process in which asparaginyl-tRNAAsn is formed by a tRNA-dependent two-step pathway. In the first step a non-discriminating aspartyl-tRNA synthetase generates the misacylated L-aspartyl-tRNAAsn species, and in the second step it is amidated to the correctly charged L-asparaginyl-tRNAAsn by the heterotrimeric aspartyl-tRNAAsn amidotransferase.","definition_xrefs":["MetaCyc:PWY490-4","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation","termid":"GO:0043039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"asparaginyl-tRNAAsn biosynthesis via transamidation","termid":"GO:0070680"}


id: SO:0002179
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An MNV that is the result of base-calling or assembly error.","direct_ancestors":[{"relation_name":"is_a","term_name":"substitution_artifact","termid":"SO:0002176"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MNV_artifact","synonyms":[{"name":"MNV artifact","type":"exact"}],"termid":"SO:0002179"}


id: PBO:0078294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRD antisense RNA 1","termid":"PBO:0078294"}


id: GO:0071741
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of the IgD isotype and two identical immunoglobulin light chains, held together by disulfide bonds, and bound via a GPI-anchor to the plasma membrane of B cells.","definition_xrefs":["ISBN:0781765196","GOC:add","PMID:11282392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IgD immunoglobulin complex","termid":"GO:0071738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"IgD immunoglobulin complex, GPI-anchored","synonyms":[{"name":"GPI-anchored IgD","type":"exact"}],"termid":"GO:0071741"}


id: PBO:0085822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; expression is regulated by phosphate levels","termid":"PBO:0085822"}


id: PBO:0052615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine rich coiled-coil 1","termid":"PBO:0052615"}


id: PBO:0027258
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_tRNA_genes","termid":"PBO:0027258"}


id: GO:0007084
data:
  {"annotated_genes":["SJAG_00900","SJAG_03891","SJAG_01745","SJAG_05207","SJAG_00416","SJAG_01050","SJAG_01242","SJAG_04489","SJAG_03892","SJAG_03783"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84028,87395,92026,94021,96948,99207,99797,102604,115493,115494,115495,115496],"is_not":false,"summary":null,"term":"GO:0007084"}]},"cv_name":"biological_process","definition":"The mitotic cell cycle process involving ESCRTIII that results in reformation of the nuclear envelope after mitotic nuclear division. In organisms undergoing closed mitosis this involves resealing or 'repair' of the nuclear envelope in the nuclear bridge.","definition_xrefs":["PMID:28242692","PMID:26040712","PMID:32109380","PMID:32848252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane reassembly","termid":"GO:0031468"},{"relation_name":"is_a","term_name":"mitotic nuclear membrane organization","termid":"GO:0101024"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00416":null,"SJAG_00900":null,"SJAG_01050":null,"SJAG_01242":null,"SJAG_01745":null,"SJAG_03783":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_04489":null,"SJAG_05207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0044085","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"mitotic nuclear membrane reassembly","references_by_uniquename":{"GO_REF:0000107":null,"PMID:32109380":null,"PMID:32243490":null},"synonyms":[{"name":"mitotic nuclear envelope reassembly","type":"related"},{"name":"nuclear envelope repair","type":"broad"},{"name":"nuclear envelope resealing","type":"broad"}],"termid":"GO:0007084","terms_by_termid":{"GO:0007084":null}}


id: GO:0003883
data:
  {"annotated_genes":["SJAG_05024"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83862],"is_not":false,"summary":null,"term":"GO:0003883"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + UTP + glutamine + H20= ADP + phosphate + CTP + glutamate.","definition_xrefs":["PMID:12354108","RHEA:26426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"CTP synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:6.3.4.2","Reactome:R-HSA-73647","MetaCyc:CTPSYN-RXN","Reactome:R-HSA-504054"],"synonyms":[{"name":"CTP synthetase activity","type":"related"},{"name":"UTP--ammonia ligase activity","type":"related"},{"name":"UTP:ammonia ligase (ADP-forming)","type":"related"},{"name":"cytidine 5'-triphosphate synthetase activity","type":"related"},{"name":"cytidine triphosphate synthetase activity","type":"related"},{"name":"uridine triphosphate aminase activity","type":"related"}],"termid":"GO:0003883","terms_by_termid":{"GO:0003883":null}}


id: PBO:0047100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 151 member B","termid":"PBO:0047100"}


id: GO:0046012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of oskar mRNA translation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translation","termid":"GO:0045727"},{"relation_name":"is_a","term_name":"regulation of oskar mRNA translation","termid":"GO:0046011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of oskar mRNA translation","synonyms":[{"name":"activation of oskar mRNA translation","type":"narrow"},{"name":"stimulation of oskar mRNA translation","type":"narrow"},{"name":"up regulation of oskar mRNA translation","type":"exact"},{"name":"up-regulation of oskar mRNA translation","type":"exact"},{"name":"upregulation of oskar mRNA translation","type":"exact"}],"termid":"GO:0046012"}


id: PBO:0060937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFE2 like bZIP transcription factor 1","termid":"PBO:0060937"}


id: PBO:0042138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 2","termid":"PBO:0042138"}


id: PR:O74756
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- chs2 gene.","definition_xrefs":["UniProtKB:O74756","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase-like protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.01","synonyms":[{"name":"Spom972h-chs2","type":"exact"}],"termid":"PR:O74756"}


id: PBO:0064107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pejvakin","termid":"PBO:0064107"}


id: PBO:0077053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF and HNRNPL related immunoregulatory long non-coding RNA","termid":"PBO:0077053"}


id: PBO:0028855
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_glucose_starvation","termid":"PBO:0028855"}


id: GO:0002598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antigen processing and presentation of lipid antigen via MHC class Ib.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation via MHC class Ib","termid":"GO:0002592"},{"relation_name":"regulates","term_name":"antigen processing and presentation of lipid antigen via MHC class Ib","termid":"GO:0048003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antigen processing and presentation of lipid antigen via MHC class Ib","synonyms":[{"name":"regulation of lipid antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0002598"}


id: PATO:0000338
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000338 compatability value (obsolete PATO:0000338)","termid":"PATO:0000338"}


id: PBO:0029492
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_meiosis_II","termid":"PBO:0029492"}


id: PBO:0085901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may be involved in positive regulation of 1,3-beta-glucan synthesis and the Pkc1p-MAPK pathway; multicopy suppressor of temperature-sensitive mutations in CDC24 and CDC42, and of mutations in BEM4; potential Cdc28p substrate; relocalizes from bud neck to cytoplasm upon DNA replication stress","termid":"PBO:0085901"}


id: PBO:0042878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 161","termid":"PBO:0042878"}


id: PBO:0010216
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"related to S. pombe SPAC521.02 and S. cerevisiae YHR134W, but has an additional N-terminal ubiquitin family domain","termid":"PBO:0010216"}


id: FYPO:0000073
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of caffeine than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002682","FYPO:0005447","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"resistance to caffeine","synonyms":[{"name":"resistance to caffeine during mitotic cell cycle","type":"related"},{"name":"resistance to caffeine during vegetative growth","type":"exact"},{"name":"resistant to caffeine","type":"exact"}],"termid":"FYPO:0000073"}


id: PBO:0059843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1","termid":"PBO:0059843"}


id: PBO:0063333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2","termid":"PBO:0063333"}


id: PBO:0063828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHOX2B antisense RNA 1","termid":"PBO:0063828"}


id: PBO:0081184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc fingers and homeoboxes 1","termid":"PBO:0081184"}


id: GO:0043776
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosylmethionine + cobalt-precorrin 6B = S-adenosylhomocysteine + cobalt-precorrin 7.","definition_xrefs":["MetaCyc:RXN-8766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"cobalt-precorrin-6B C5-methyltransferase activity","secondary_identifiers":["RHEA:36067"],"synonyms":[{"name":"cobalt-precorrin 6B C5-methyltransferase activity","type":"exact"},{"name":"precorrin-6 methyltransferase activity","type":"exact"},{"name":"precorrin-6Y C5,15-methyltransferase (decarboxylating)","type":"broad"},{"name":"precorrin-6Y methylase","type":"broad"}],"termid":"GO:0043776"}


id: PBO:0062016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily L member 6 pseudogene","termid":"PBO:0062016"}


id: PBO:0000153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C2H2 type","termid":"PBO:0000153"}


id: PBO:0090112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit","termid":"PBO:0090112"}


id: PBO:0082267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ammonium permease; belongs to Mep-Amt-Rh family of well-conserved ammonium (NH4+) transporters that includes the human Rh factors; expression is under the nitrogen catabolite repression regulation; activity regulated by TORC1 effectors, Npr1p and Par32p; human homolog RHCG complements yeast null mutant; mutations in human homolog RHCG implicated in metabolic acidosis; MEP1 has a paralog, MEP3, that arose from the whole genome duplication","termid":"PBO:0082267"}


id: GO:0014034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes committed to become a neural crest cell.","definition_xrefs":["GOC:ef","GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell fate commitment","termid":"GO:0048865"},{"relation_name":"part_of","term_name":"neural crest formation","termid":"GO:0014029"},{"relation_name":"part_of","term_name":"neural crest cell differentiation","termid":"GO:0014033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest cell fate commitment","termid":"GO:0014034"}


id: PBO:0054289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1680","termid":"PBO:0054289"}


id: PBO:0079870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-ureidopropionase 1","termid":"PBO:0079870"}


id: GO:0097097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the nasal suture is generated and organized.","definition_xrefs":["GOC:sl","Wikipedia:Cranial_sutures","Wikipedia:Head_and_neck_anatomy#Musculoskeletal_system","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facial suture morphogenesis","termid":"GO:0097096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nasal suture morphogenesis","synonyms":[{"name":"internasal suture morphogenesis","type":"exact"}],"termid":"GO:0097097"}


id: PR:G2TRL3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsa3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRL3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome assembly protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.19","synonyms":[{"name":"Spom972h-rsa3","type":"exact"}],"termid":"PR:G2TRL3"}


id: PBO:0026693
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_caesium","termid":"PBO:0026693"}


id: GO:0010027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the thylakoid membrane.","definition_xrefs":["GOC:tb","GOC:jl","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane organization","termid":"GO:0009668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"thylakoid membrane organization","synonyms":[{"name":"thylakoid membrane organisation","type":"exact"},{"name":"thylakoid membrane organization and biogenesis","type":"related"}],"termid":"GO:0010027"}


id: MOD:01983
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N,N-dimethyllglycine.","definition_xrefs":["ChEBI:17724","PubMed:23818633","PubMed:23978223","RESID:AA0620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated glycine","termid":"MOD:00714"},{"relation_name":"is_a","term_name":"alpha-amino dimethylated residue","termid":"MOD:01686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N-dimethylglycine","synonyms":[{"name":"(dimethylamino)ethanoic acid","type":"exact"},{"name":"1-carboxy-N,N-dimethylaminomethane","type":"exact"},{"name":"2-(dimethylamino)acetic acid","type":"exact"},{"name":"MOD_RES N,N-dimethylglycine","type":"exact"},{"name":"vitamin B16","type":"exact"}],"termid":"MOD:01983"}


id: SO:1001283
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A stop codon signal for a UAA stop codon redefinition.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stop_codon_signal","termid":"SO:1001288"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UAA_stop_codon_signal","synonyms":[{"name":"UAA stop codon signal","type":"exact"}],"termid":"SO:1001283"}


id: PBO:0063455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE11A antisense RNA 1","termid":"PBO:0063455"}


id: GO:0062242
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"One of the two endoplasmic reticulum-derived lipid bilayer membranes that bound a double membrane vesicle viral factory.","definition_xrefs":["PMID:22440839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasmic vesicle membrane","termid":"GO:0044162"},{"relation_name":"part_of","term_name":"double membrane vesicle viral factory","termid":"GO:0039718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"double membrane vesicle viral factory membrane","synonyms":[{"name":"membrane of double membrane vesicle viral factory","type":"exact"}],"termid":"GO:0062242"}


id: GO:0014057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of acetylcholine.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter secretion","termid":"GO:0001956"},{"relation_name":"is_a","term_name":"regulation of acetylcholine secretion, neurotransmission","termid":"GO:0014056"},{"relation_name":"is_a","term_name":"positive regulation of synaptic transmission, cholinergic","termid":"GO:0032224"},{"relation_name":"is_a","term_name":"positive regulation of amine transport","termid":"GO:0051954"},{"relation_name":"positively_regulates","term_name":"acetylcholine secretion, neurotransmission","termid":"GO:0014055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"positive regulation of acetylcholine secretion, neurotransmission","synonyms":[{"name":"activation of acetylcholine secretion","type":"narrow"},{"name":"stimulation of acetylcholine secretion","type":"narrow"},{"name":"up regulation of acetylcholine secretion","type":"exact"},{"name":"up-regulation of acetylcholine secretion","type":"exact"},{"name":"upregulation of acetylcholine secretion","type":"exact"}],"termid":"GO:0014057"}


id: PBO:0069968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1263, pseudogene","termid":"PBO:0069968"}


id: GO:0090269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of a fibroblast growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"fibroblast growth factor production","termid":"GO:0090269"}


id: GO:0031688
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an A2B adenosine receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine receptor binding","termid":"GO:0031685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"A2B adenosine receptor binding","synonyms":[{"name":"A2B adenosine receptor ligand","type":"narrow"}],"termid":"GO:0031688"}


id: GO:0052084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont modulates the frequency, rate or extent of the ethylene-mediated defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host defense response","termid":"GO:0052031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation by symbiont of host ethylene-mediated defense response","secondary_identifiers":["GO:0052279","GO:0052441","GO:0052077"],"synonyms":[{"name":"modulation by organism of defense-related ethylene-mediated signal transduction pathway in other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by organism of ethylene-mediated defense response of other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by symbiont of defense-related host ethylene-mediated signal transduction pathway","type":"broad"}],"termid":"GO:0052084"}


id: GO:0052889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of reactions in which 9,9'-di-cis-zeta-carotene is desaturated to 7,9,9'-tri-cis-neurosporene, and then 7,9,7',9'-tetra-cis-lycopene. The overall reaction for this process is: 9,9'-di-cis-zeta-carotene + 2 quinone = 2 quinol + 7,9,7',9'-tetra-cis-lycopene.","definition_xrefs":["MetaCyc:PWY-6475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotene metabolic process","termid":"GO:0016119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene","synonyms":[{"name":"7,9,7',9'-tetra-cis-lycopene biosynthesis from 9,9'-di-cis-zeta-carotene","type":"exact"},{"name":"9,9'-di-cis-zeta-carotene catabolism to 7,9,7',9'-tetra-cis-lycopene","type":"exact"}],"termid":"GO:0052889"}


id: PBO:0058709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6837","termid":"PBO:0058709"}


id: PBO:0076018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 11 interacting protein","termid":"PBO:0076018"}


id: PR:Q9C0U3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug153 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0U3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 153 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPACUNK4.19","synonyms":[{"name":"Spom972h-mug153","type":"exact"}],"termid":"PR:Q9C0U3"}


id: GO:0045918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cytolysis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytolysis","termid":"GO:0042268"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"negatively_regulates","term_name":"cytolysis","termid":"GO:0019835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cytolysis","synonyms":[{"name":"down regulation of cytolysis","type":"exact"},{"name":"down-regulation of cytolysis","type":"exact"},{"name":"downregulation of cytolysis","type":"exact"},{"name":"inhibition of cytolysis","type":"narrow"}],"termid":"GO:0045918"}


id: GO:0061405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a hydrostatic pressure stimulus. Hydrostatic pressure is the force acting on an object in a system where the fluid is at rest (as opposed to moving). The weight of the fluid above the object creates pressure on it.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to hydrostatic pressure (obsolete GO:0061405)","termid":"GO:0061405"}


id: PBO:0089903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, flocculin, Flo11-related","termid":"PBO:0089903"}


id: GO:0007474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which the area of a imaginal disc-derived wing that will form a wing vein is specified.","definition_xrefs":["GOC:isa_complete","GOC:dph","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing morphogenesis","termid":"GO:0007476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived wing vein specification","synonyms":[{"name":"wing vein specification","type":"exact"}],"termid":"GO:0007474"}


id: PBO:0063035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p21 (RAC1) activated kinase 2","termid":"PBO:0063035"}


id: PBO:0059619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 31","termid":"PBO:0059619"}


id: PR:C6Y4C9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spo13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4C9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation-specific protein 13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.12","synonyms":[{"name":"Spom972h-spo13","type":"exact"}],"termid":"PR:C6Y4C9"}


id: GO:0075234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the directed movement of a zoospore on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete zoospore movement on or near host (obsolete GO:0075234)","synonyms":[{"name":"zoospore motility on or near host","type":"exact"}],"termid":"GO:0075234"}


id: PBO:0060111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 12","termid":"PBO:0060111"}


id: PBO:0062071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 2 pseudogene","termid":"PBO:0062071"}


id: PBO:0053731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 945","termid":"PBO:0053731"}


id: MOD:01523
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Applied Biosystems iTRAQ4plex 115 reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"iTRAQ4plex-115 reporter+balance reagent acylated residue","termid":"MOD:01492"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter fragment","termid":"MOD:01521"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-115 reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01523"}


id: PBO:0012564
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by S. cerevisiae Hys2","termid":"PBO:0012564"}


id: PBO:0004137
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae PRP6","termid":"PBO:0004137"}


id: SO:0000174
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A conserved AT-rich septamer found about 25-bp before the start point of many eukaryotic RNA polymerase II transcript units; may be involved in positioning the enzyme for correct initiation; consensus=TATA(A|T)A(A|T).","definition_xrefs":["PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA_box","secondary_identifiers":["http://en.wikipedia.org/wiki/TATA_box"],"synonyms":[{"name":"Goldstein-Hogness box","type":"exact"},{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:TATA_box","type":"exact"},{"name":"TATA box","type":"exact"}],"termid":"SO:0000174"}


id: GO:0097129
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin D2 and cyclin-dependent kinase 4 (CDK4). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["GOC:so","PMID:15935619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cyclin D2-CDK4 complex","termid":"GO:0097129"}


id: PBO:0081836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 771","termid":"PBO:0081836"}


id: MOD:01890
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an N-formyl-L-methionine residue and an L-histidine residue to form N-[(L-histidin-1'-yl)methyl]-L-methionine.","definition_xrefs":["RESID:AA0566#FMET","PubMed:19622680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked L-histidine residue","termid":"MOD:02048"},{"relation_name":"is_a","term_name":"crosslinked N-formyl-L-methionine residue","termid":"MOD:02062"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet)","synonyms":[{"name":"(2S)-2-([(4-[(2S)-2-amino-2-carboxyethyl]-1H-imidazol-1-yl)methyl]amino)-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"N-[(L-histidin-1'-yl)methyl]-L-methionine","type":"exact"}],"termid":"MOD:01890"}


id: SO:0000894
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing an epigenetic process where a gene is inactivated by DNA modifications, resulting in repression of transcription.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silenced","termid":"SO:0000893"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced_by_DNA_modification","synonyms":[{"name":"silenced by DNA modification","type":"exact"}],"termid":"SO:0000894"}


id: FYPO:0003163
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a nuclease activity is abnormal. All nuclease activities may be abnormal, or a specific nuclease activity may be assayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"abnormal nuclease activity","termid":"FYPO:0003163"}


id: GO:1904896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of an ESCRT complex into its constituent components.","definition_xrefs":["GO_REF:0000079","GOC:PARL","GOC:TermGenie","PMID:21118109","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ESCRT complex disassembly","synonyms":[{"name":"endosomal sorting complex required for transport disassembly","type":"exact"}],"termid":"GO:1904896"}


id: GO:0031419
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"},{"relation_name":"is_a","term_name":"tetrapyrrole binding","termid":"GO:0046906"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cobalamin binding","synonyms":[{"name":"vitamin B12 binding","type":"exact"}],"termid":"GO:0031419"}


id: GO:1901567
data:
  {"annotated_genes":["SJAG_01458"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036042"}]},"cv_name":"molecular_function","definition":"Binding to fatty acid derivative.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid binding","termid":"GO:0008289"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01458":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"fatty acid derivative binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1901567","terms_by_termid":{"GO:0036042":null}}


id: GO:0098863
data:
  {"annotated_genes":["SJAG_02509","SJAG_03073","SJAG_04387","SJAG_03835","SJAG_03673","SJAG_04003","SJAG_02737"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97498,100077,103481,105663,108193,110014,113021],"is_not":false,"summary":null,"term":"GO:0098863"}]},"cv_name":"biological_process","definition":"The directed movement of the nucleus by pushing forces exerted by polymerization of backward-extending microtubules.","definition_xrefs":["PMID:11309419","GOC:vw","PMID:16611238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear migration","termid":"GO:0007097"},{"relation_name":"is_a","term_name":"microtubule polymerization based movement","termid":"GO:0099098"},{"relation_name":"is_a","term_name":"microtubule-based transport","termid":"GO:0099111"}],"gene_count":7,"genes_by_uniquename":{"SJAG_02509":null,"SJAG_02737":null,"SJAG_03073":null,"SJAG_03673":null,"SJAG_03835":null,"SJAG_04003":null,"SJAG_04387":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"nuclear migration by microtubule mediated pushing forces","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0098863","terms_by_termid":{"GO:0098863":null}}


id: GO:0090438
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the reaction: (3S)-2,3-epoxy-2,3-dihydrosqualene = camelliol C.","definition_xrefs":["PMID:17985917","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"camelliol C synthase activity","synonyms":[{"name":"(3S)-2,3-epoxy-2,3-dihydrosqualene mutase (cyclizing, camelliol-C-forming)","type":"exact"}],"termid":"GO:0090438"}


id: PBO:0069299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 555, pseudogene","termid":"PBO:0069299"}


id: GO:0090659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The behavior of an organism relating to the progression of that organism along the ground by the process of lifting and setting down each leg.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotory behavior","termid":"GO:0007626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"walking behavior","synonyms":[{"name":"locomotor gait pattern","type":"narrow"}],"termid":"GO:0090659"}


id: GO:1905206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of cell death in response to hydrogen peroxide.","definition_xrefs":["PMID:20550618","GOC:BHF","GOC:BHF_miRNA","GO_REF:0000058","GOC:TermGenie","GOC:bc"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of hydrogen peroxide-induced cell death (obsolete GO:1905206)","synonyms":[{"name":"activation of cell death in response to H2O2","type":"narrow"},{"name":"activation of cell death in response to hydrogen peroxide","type":"narrow"},{"name":"activation of hydrogen peroxide-mediated cell death","type":"related"},{"name":"positive regulation of cell death in response to H2O2","type":"exact"},{"name":"positive regulation of cell death in response to hydrogen peroxide","type":"exact"},{"name":"positive regulation of hydrogen peroxide-mediated cell death","type":"related"},{"name":"up regulation of cell death in response to H2O2","type":"exact"},{"name":"up regulation of cell death in response to hydrogen peroxide","type":"exact"},{"name":"up regulation of hydrogen peroxide-mediated cell death","type":"related"},{"name":"up-regulation of cell death in response to H2O2","type":"exact"},{"name":"up-regulation of cell death in response to hydrogen peroxide","type":"exact"},{"name":"up-regulation of hydrogen peroxide-mediated cell death","type":"related"},{"name":"upregulation of cell death in response to H2O2","type":"exact"},{"name":"upregulation of cell death in response to hydrogen peroxide","type":"exact"},{"name":"upregulation of hydrogen peroxide-mediated cell death","type":"related"}],"termid":"GO:1905206"}


id: MOD:00357
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to 1'-(8alpha-FMN)-L-histidine.","definition_xrefs":["PubMed:11902668","PubMed:8611516","RESID:AA0352","Unimod:409#H"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FMN modified residue","termid":"MOD:00896"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1'-(8alpha-FMN)-L-histidine","synonyms":[{"name":"(S)-2-amino-3-(1-[8alpha riboflavin 5'-dihydrogen phosphate]imidazol-4-yl)propanoic acid","type":"exact"},{"name":"1'-(8alpha-FMN)-L-histidine","type":"exact"},{"name":"8alpha-(N(epsilon)-histidyl)FMN","type":"exact"},{"name":"8alpha-(N1'-histidyl)FMN","type":"exact"},{"name":"FMNH","type":"related"},{"name":"MOD_RES Tele-8alpha-FMN histidine","type":"exact"},{"name":"N(tau)-(8alpha-FMN)-histidine","type":"exact"},{"name":"Ntele8aFMNHis","type":"exact"},{"name":"flavin mononucleotide","type":"related"},{"name":"tele-(8alpha-FMN)-histidine","type":"exact"}],"termid":"MOD:00357"}


id: PBO:0086328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with similarity to tRNA synthetases; non-tagged protein is detected in purified mitochondria; null mutant is viable and displays elevated frequency of mitochondrial genome loss","termid":"PBO:0086328"}


id: PBO:0058792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7161","termid":"PBO:0058792"}


id: PBO:0078081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 2","termid":"PBO:0078081"}


id: MOD:00260
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-threonine residue and the 5'-end of DNA through a phosphodiester bond to form O-(phospho-5'-DNA)-L-threonine.","definition_xrefs":["PubMed:3081736","RESID:AA0255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribonucleic acid linked residue","termid":"MOD:00750"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(phospho-5'-DNA)-L-threonine","synonyms":[{"name":"(S)-2-amino-3-(5'-deoxyribonucleic acid phosphonoxy)butanoic acid","type":"exact"},{"name":"O-(phospho-5'-DNA)-L-threonine","type":"exact"},{"name":"O3-(phospho-5'-DNA)-L-threonine","type":"exact"},{"name":"O3-L-threonine 5'-DNA phosphodiester","type":"exact"}],"termid":"MOD:00260"}


id: GO:0060698
data:
  {"annotated_genes":["SJAG_02594"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84901],"is_not":false,"summary":null,"term":"GO:0060698"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of endoribonuclease.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonuclease inhibitor activity","termid":"GO:0008428"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02594":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140678","GO:0004857","GO:0003674","GO:0030234","GO:0098772"],"is_obsolete":false,"name":"endoribonuclease inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0060698","terms_by_termid":{"GO:0060698":null}}


id: PBO:0088193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc finger transcription factor; contains a Zn(2)-Cys(6) binuclear cluster domain, positively regulates transcription of URA1, URA3, URA4, and URA10, which are involved in de novo pyrimidine biosynthesis, in response to pyrimidine starvation; activity may be modulated by interaction with Tup1p","termid":"PBO:0088193"}


id: FYPO:0005331
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the repair of pyrimidine-pyrimidone 6-4 photoproducts by error-prone translesion synthesis occurs to a lower extent than normal.","definition_xrefs":["PMID:20453833","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal error-prone translesion synthesis","termid":"FYPO:0003892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000293","FYPO:0000298","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased error-prone translesion synthesis of pyrimidine-pyrimidone 6-4 photoproducts","synonyms":[{"name":"decreased error-prone translesion synthesis across TT-(6-4)","type":"exact"},{"name":"decreased error-prone translesion synthesis of pyrimidine-pyrimidone 6-4 photoproducts during mitotic cell cycle","type":"related"},{"name":"decreased error-prone translesion synthesis of pyrimidine-pyrimidone 6-4 photoproducts during vegetative growth","type":"exact"}],"termid":"FYPO:0005331"}


id: GO:0002758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated by a ligand binding to its receptor that lead to the activation or perpetuation of an innate immune response.","definition_xrefs":["PMID:11418339","PMID:28105028","GOC:mah","GOC:jy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activation of innate immune response","termid":"GO:0002218"},{"relation_name":"is_a","term_name":"immune response-activating signaling pathway","termid":"GO:0002757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"innate immune response-activating signaling pathway","secondary_identifiers":["GO:0010204","GO:0009870"],"synonyms":[{"name":"defence response signaling pathway, resistance gene-dependent","type":"related"},{"name":"defence response signaling pathway, resistance gene-independent","type":"related"},{"name":"defence response signalling pathway, resistance gene-dependent","type":"related"},{"name":"defence response signalling pathway, resistance gene-independent","type":"related"},{"name":"defense response signaling pathway, resistance gene-dependent","type":"related"},{"name":"defense response signaling pathway, resistance gene-independent","type":"related"},{"name":"defense response signalling pathway, resistance gene-dependent","type":"related"},{"name":"effector triggered immunity","type":"broad"},{"name":"effector-triggered immune signaling","type":"related"},{"name":"effector-triggered immunity","type":"broad"}],"termid":"GO:0002758"}


id: SO:0001697
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence identified by CHiP seq technology to contain a protein binding site.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"contains","term_name":"protein_binding_site","termid":"SO:0000410"},{"relation_name":"is_a","term_name":"experimentally_defined_binding_region","termid":"SO:0001696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ChIP_seq_region","synonyms":[{"name":"ChIP seq region","type":"related"}],"termid":"SO:0001697"}


id: PBO:0049600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 3","termid":"PBO:0049600"}


id: GO:1903727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phospholipid metabolic process.","definition_xrefs":["GO_REF:0000058","PMID:10657240","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid metabolic process","termid":"GO:0045834"},{"relation_name":"is_a","term_name":"positive regulation of phosphate metabolic process","termid":"GO:0045937"},{"relation_name":"is_a","term_name":"regulation of phospholipid metabolic process","termid":"GO:1903725"},{"relation_name":"positively_regulates","term_name":"phospholipid metabolic process","termid":"GO:0006644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of phospholipid metabolic process","synonyms":[{"name":"activation of phospholipid metabolic process","type":"narrow"},{"name":"activation of phospholipid metabolism","type":"narrow"},{"name":"positive regulation of phospholipid metabolism","type":"exact"},{"name":"up regulation of phospholipid metabolic process","type":"exact"},{"name":"up regulation of phospholipid metabolism","type":"exact"},{"name":"up-regulation of phospholipid metabolic process","type":"exact"},{"name":"up-regulation of phospholipid metabolism","type":"exact"},{"name":"upregulation of phospholipid metabolic process","type":"exact"},{"name":"upregulation of phospholipid metabolism","type":"exact"}],"termid":"GO:1903727"}


id: GO:0034121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor signaling pathway.","definition_xrefs":["PMID:16551253","PMID:17328678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"},{"relation_name":"regulates","term_name":"toll-like receptor signaling pathway","termid":"GO:0002224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of toll-like receptor signaling pathway","synonyms":[{"name":"regulation of TLR signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0034121"}


id: PBO:0079497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin interacting protein","termid":"PBO:0079497"}


id: GO:0002881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of a chronic inflammatory response to a non-antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chronic inflammatory response","termid":"GO:0002677"},{"relation_name":"is_a","term_name":"regulation of chronic inflammatory response to non-antigenic stimulus","termid":"GO:0002880"},{"relation_name":"negatively_regulates","term_name":"chronic inflammatory response to non-antigenic stimulus","termid":"GO:0002545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of chronic inflammatory response to non-antigenic stimulus","synonyms":[{"name":"down regulation of chronic inflammatory response to non-antigenic stimulus","type":"exact"},{"name":"down-regulation of chronic inflammatory response to non-antigenic stimulus","type":"exact"},{"name":"downregulation of chronic inflammatory response to non-antigenic stimulus","type":"exact"},{"name":"inhibition of chronic inflammatory response to non-antigenic stimulus","type":"narrow"}],"termid":"GO:0002881"}


id: PBO:0089879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit Emc4","termid":"PBO:0089879"}


id: SO:0002236
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene which codes for 18S_rRNA, which functions as the small subunit of the ribosome in eukaryotes.","direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic_SSU_rRNA_gene","termid":"SO:0002362"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_rRNA_18S_gene","synonyms":[{"name":"18S rRNA gene","type":"exact"},{"name":"18S_rRNA_gene","type":"exact"}],"termid":"SO:0002236"}


id: PBO:0035775
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-short_disorganized_microtubule_bundle","termid":"PBO:0035775"}


id: PBO:0064492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I subunit E","termid":"PBO:0064492"}


id: GO:0070428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the nucleotide-binding oligomerization domain containing 1 (NOD1) pathway.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0070424"},{"relation_name":"regulates","term_name":"nucleotide-binding oligomerization domain containing 1 signaling pathway","termid":"GO:0070427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway","synonyms":[{"name":"regulation of NOD1 signaling pathway","type":"exact"},{"name":"regulation of nucleotide-binding oligomerization domain containing 1 signalling pathway","type":"exact"}],"termid":"GO:0070428"}


id: PR:O14067
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1687.08 gene.","definition_xrefs":["UniProtKB:O14067","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1687.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.08","synonyms":[{"name":"Spom972h-SPAC1687.08","type":"exact"}],"termid":"PR:O14067"}


id: MOD:01134
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluorescein labelling of peptide N-terminal using NHS ester","termid":"MOD:01134"}


id: PR:O94424
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A general transcription factor IIF subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02358","PANTHER:PTHR10445:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor IIF subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1198.13c","secondary_identifiers":["UniProtKB:O94424"],"synonyms":[{"name":"ATP-dependent helicase TFG2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GTF2F2","type":"exact"},{"name":"TFIIF medium subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"TFIIF-beta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94424"}


id: GO:0046403
data:
  {"annotated_genes":["SJAG_02680"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89760],"is_not":false,"summary":null,"term":"GO:0046403"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3'end (2'-deoxyribonucleotide 3'-phosphate)-DNA + H2O = a 3'-end 2'-deoxyribonucleotide-DNA + phosphate.","definition_xrefs":["RHEA:14113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02680":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"polynucleotide 3'-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5649705","EC:3.1.3.32","MetaCyc:POLYNUCLEOTIDE-3-PHOSPHATASE-RXN"],"synonyms":[{"name":"2'(3')-polynucleotidase activity","type":"related"},{"name":"5'-polynucleotidekinase 3'-phosphatase activity","type":"related"},{"name":"DNA 3'-phosphatase activity","type":"related"},{"name":"deoxyribonucleate 3'-phosphatase activity","type":"related"},{"name":"polynucleotide 3'-phosphohydrolase activity","type":"related"}],"termid":"GO:0046403","terms_by_termid":{"GO:0046403":null}}


id: FYPO:0004743
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in centromere outer repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation at centromere outer repeat during vegetative growth","termid":"FYPO:0003235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal histone H3-K9 dimethylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"normal histone H3-K9 dimethylation at centromere otr during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 dimethylation at centromere outer repeat region during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K9 dimethylation at centromere outer repeat region during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 dimethylation at pericentric region during vegetative growth","type":"related"},{"name":"normal histone H3-K9 dimethylation at pericentromeric region during vegetative growth","type":"related"},{"name":"normal histone H3K9me2 at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0004743"}


id: PBO:0074219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC44A3 pseudogene 1","termid":"PBO:0074219"}


id: PBO:0068344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 115","termid":"PBO:0068344"}


id: PBO:0031531
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_oxidoreductase_activity","termid":"PBO:0031531"}


id: RO:HOM0000072
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Biological homology that involves an ectopic structure and the normally positioned structure.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_biological_homology_relationship_with","termid":"RO:HOM0000008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_homeosis_relationship_with","synonyms":[{"name":"heterotopy","type":"related"}],"termid":"RO:HOM0000072"}


id: PBO:0064783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase, Mg2+/Mn2+ dependent 1D","termid":"PBO:0064783"}


id: PBO:0076087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STT3 oligosaccharyltransferase complex catalytic subunit A","termid":"PBO:0076087"}


id: PBO:0026965
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_vegetative_cell_population_growth_during_phosphate_starvation","termid":"PBO:0026965"}


id: GO:0072374
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-carotene + O2 + reduced [NADPH--hemoprotein reductase] = alpha-cryptoxanthin + H(+) + H2O + oxidized [NADPH--hemoprotein reductase]. Zeinoxanthin may also be used as the substrate, in which case lutein is produced.","definition_xrefs":["PMID:8837513","EC:1.14.14.158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"carotene epsilon hydroxylase activity","termid":"GO:0072374"}


id: GO:0052619
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP + L-glutamate + factor gamma-F420-1 = GDP + H+ + factor gamma-F420-2 + phosphate.","definition_xrefs":["MetaCyc:RXN-8081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coenzyme F420-0 gamma-glutamyl ligase activity","termid":"GO:0043773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"coenzyme F420-1:gamma-L-glutamate ligase activity","secondary_identifiers":["EC:6.3.2.34","RHEA:30523"],"termid":"GO:0052619"}


id: PBO:0082028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucanosyltransferase; involved with Gas2p in spore wall assembly; has similarity to Gas1p; localizes to the cell wall","termid":"PBO:0082028"}


id: PBO:0078955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transformation/transcription domain associated protein","termid":"PBO:0078955"}


id: PR:O94248
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A midasin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR22908:SF14","PRO:DNx","OMA:SCHPO04871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"midasin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC737.08","secondary_identifiers":["UniProtKB:O94248"],"synonyms":[{"name":"MIDAS-containing protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MDN1","type":"exact"}],"termid":"PR:O94248"}


id: PBO:0080201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventricular zone expressed PH domain containing 1","termid":"PBO:0080201"}


id: PBO:0056081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 6 family member S","termid":"PBO:0056081"}


id: PBO:0085135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein required for 60S ribosome subunit biogenesis; constituent of 66S pre-ribosomal particles; physically interacts with Nop8p and the exosome subunit Rrp43p","termid":"PBO:0085135"}


id: PBO:0018005
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae CDC2","termid":"PBO:0018005"}


id: GO:0070405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ammonium ions (NH4+).","definition_xrefs":["CHEBI:28938","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ammonium ion binding","synonyms":[{"name":"ammonium binding","type":"related"}],"termid":"GO:0070405"}


id: PBO:0079475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twinkle mtDNA helicase","termid":"PBO:0079475"}


id: PBO:0077190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLX1 neighbor","termid":"PBO:0077190"}


id: GO:1904615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biphenyl stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:23196670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"response to biphenyl","termid":"GO:1904614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to biphenyl","termid":"GO:1904615"}


id: PBO:0004912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpt1 (predicted)","termid":"PBO:0004912"}


id: PBO:0056536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial coiled-coil domain 1 pseudogene 1","termid":"PBO:0056536"}


id: MOD:01158
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-selenocysteine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"L-selenocysteine residue","termid":"MOD:00031"},{"relation_name":"is_a","term_name":"selenium containing residue","termid":"MOD:00745"},{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-selenocysteine residue","termid":"MOD:01158"}


id: PBO:0074554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 7","termid":"PBO:0074554"}


id: PBO:0049456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogenin 1 pseudogene 1","termid":"PBO:0049456"}


id: FYPO:0003174
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleotide-excision repair is normal (i.e. indistinguishable from wild type) during a cellular response to ultraviolet light. Nucleotide-excision repair is a DNA repair process in which a small region of the strand surrounding the damage is removed as an oligonucleotide, and the resulting small gap is filled in by the sequential action of DNA polymerase and DNA ligase.","definition_xrefs":["PomBase:mah","GO:0006289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA repair","termid":"FYPO:0006569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000298","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal nucleotide-excision repair during cellular response to UV","synonyms":[{"name":"normal NER during cellular response to UV","type":"exact"},{"name":"normal excision repair during cellular response to UV","type":"broad"},{"name":"normal nucleotide-excision repair during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"normal nucleotide-excision repair during cellular response to UV during vegetative growth","type":"exact"},{"name":"normal nucleotide-excision repair during cellular response to ultraviolet light","type":"exact"}],"termid":"FYPO:0003174"}


id: _global:contained_by
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X contained_by Y iff X starts after start of Y and X ends before end of Y.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contained_by","termid":"_global:contained_by"}


id: GO:0060631
data:
  {"annotated_genes":["SJAG_04259","SJAG_03327","SJAG_01082","SJAG_01330"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102362,110559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[109850],"is_not":false,"rel_names":["is_a","positively_regulates","regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[97391],"is_not":false,"rel_names":["is_a","regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of meiosis I, a cell cycle process comprising the steps by which a cell progresses through the first phase of meiosis, in which cells divide and homologous chromosomes are paired and segregated from each other, producing two daughter cells.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of meiotic nuclear division","termid":"GO:0040020"},{"relation_name":"regulates","term_name":"meiosis I","termid":"GO:0007127"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01082":null,"SJAG_01330":null,"SJAG_03327":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0008150","GO:0140013","GO:0007049"],"is_obsolete":false,"name":"regulation of meiosis I","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0060631","terms_by_termid":{"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: PBO:0089803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD/NAD(P)-binding domain superfamily","termid":"PBO:0089803"}


id: GO:0061773
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chromatin silencing complex that recruits histone-modifying enzymes and upregulates silencing of rDNA in response to glucose starvation.","definition_xrefs":["PMID:18485871","GOC:BHM","Intact:EBI-11789632","Intact:EBI-11790279"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin silencing complex","termid":"GO:0005677"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005730"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575","GO:0005730"],"is_obsolete":false,"name":"eNoSc complex","synonyms":[{"name":"energy dependent nucleolar silencing complex","type":"exact"}],"termid":"GO:0061773"}


id: SO:0000503
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000503 alternately_spliced_gene_encodeing_one_transcript (obsolete SO:0000503)","termid":"SO:0000503"}


id: GO:0103032
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: D-glycerate + NAD = H+ + 2-hydroxy-3-oxopropanoate + NADH.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete tartronate semialdehyde reductase activity (obsolete GO:0103032)","termid":"GO:0103032"}


id: PBO:0067037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 51, pseudogene","termid":"PBO:0067037"}


id: PATO:0001397
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality that arises by virtue of whether the bearer's disposition to differentiate into one or more mature cell types.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular quality","termid":"PATO:0001396"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular potency","termid":"PATO:0001397"}


id: PBO:0084865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; essential for viability, unlike most other mitoribosomal proteins","termid":"PBO:0084865"}


id: GO:0150146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a cell junction into its constituent components.","definition_xrefs":["GOC:aruk","PMID:25490267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"},{"relation_name":"is_a","term_name":"cell junction organization","termid":"GO:0034330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell junction disassembly","termid":"GO:0150146"}


id: GO:0030161
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Stops, prevents or reduces the activity of the enzyme calpain, which catalyzes of the preferential cleavage of Tyr-Xaa, Met-Xaa or Arg-Xaa with Leu or Val as the P2 residue.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete calpain inhibitor activity (obsolete GO:0030161)","synonyms":[{"name":"calpain inhibitor activity","type":"exact"}],"termid":"GO:0030161"}


id: PR:O94495
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An elongator complex protein 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR15641:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18E5.05c","secondary_identifiers":["UniProtKB:O94495"],"synonyms":[{"name":"SPBC18E5.05c","type":"related"},{"name":"Spom972h-ELP5","type":"exact"},{"name":"elp5","type":"related"},{"name":"protein iki1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94495"}


id: GO:0055041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclopentanol + NAD+ = cyclopentanone + H+ + NADH.","definition_xrefs":["EC:1.1.1.163","RHEA:11728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cyclopentanol dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R02553","MetaCyc:CYCLOPENTANOL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"cyclopentanol:NAD+ oxidoreductase activity","type":"related"},{"name":"cyclopentanol:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0055041"}


id: GO:0061602
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction CTP + molybdenum cofactor = diphosphate + cytidylyl molybdenum cofactor.","definition_xrefs":["GOC:dph","EC:2.7.7.76"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0003824","GO:0016779","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"molybdenum cofactor cytidylyltransferase activity","secondary_identifiers":["RHEA:31335"],"termid":"GO:0061602"}


id: GO:0051108
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-carnitine + CoA + ATP = AMP + diphosphate + D-carnitinyl-CoA.","definition_xrefs":["MetaCyc:DCARNCOALIG-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"carnitine-CoA ligase activity","secondary_identifiers":["RHEA:30543"],"synonyms":[{"name":"carnitine synthetase activity","type":"exact"},{"name":"crotonobetaine/carnitine-CoA ligase activity","type":"broad"}],"termid":"GO:0051108"}


id: PBO:0063947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PINK1 antisense RNA","termid":"PBO:0063947"}


id: PBO:0048038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrous sheath interacting protein 1","termid":"PBO:0048038"}


id: PBO:0055788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysyl oxidase","termid":"PBO:0055788"}


id: GO:1900727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of osmoregulated periplasmic glucan.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan biosynthetic process","termid":"GO:0009250"},{"relation_name":"is_a","term_name":"osmoregulated periplasmic glucan metabolic process","termid":"GO:1900725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"osmoregulated periplasmic glucan biosynthetic process","synonyms":[{"name":"osmoregulated periplasmic glucan anabolism","type":"exact"},{"name":"osmoregulated periplasmic glucan biosynthesis","type":"exact"},{"name":"osmoregulated periplasmic glucan formation","type":"exact"},{"name":"osmoregulated periplasmic glucan synthesis","type":"exact"}],"termid":"GO:1900727"}


id: GO:1901417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to ethanol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to ethanol","termid":"GO:1901416"},{"relation_name":"is_a","term_name":"negative regulation of response to alcohol","termid":"GO:1901420"},{"relation_name":"negatively_regulates","term_name":"response to ethanol","termid":"GO:0045471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to ethanol","synonyms":[{"name":"down regulation of response to ethanol","type":"exact"},{"name":"down-regulation of response to ethanol","type":"exact"},{"name":"downregulation of response to ethanol","type":"exact"},{"name":"inhibition of response to ethanol","type":"narrow"}],"termid":"GO:1901417"}


id: PBO:0017541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial iron ion transmembrane transporter (predicted)","termid":"PBO:0017541"}


id: PR:000037296
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase cds1 in Schizosaccharomyces pombe that has been phosphorylated on the Thr residue in the second TQ motif by rad3. Example: UniProtKB:Q09170, Thr-11, MOD:00047.","definition_xrefs":["PomBase:AL","PMID:15173168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine/threonine-protein kinase cds1 (Schizosaccharomyces pombe)","termid":"PR:000030002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cds1/Phos:(T11)","pombase_gene_id":"SPCC18B5.11c","synonyms":[{"name":"PomBase_original_PRO_term_name: serine/threonine-protein kinase cds1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-CHEK2/Phos:1","type":"exact"},{"name":"cds1/Phos:(T11)","type":"exact"}],"termid":"PR:000037296"}


id: GO:0103077
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: quercetin-3-glucoside + UDP-L-rhamnose = quercetin-3-O-glucoside-7-O-rhamnoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete quercetin 3-glucoside 7-O-rhamnosyltransferase activity (obsolete GO:0103077)","termid":"GO:0103077"}


id: PBO:0042179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin B1","termid":"PBO:0042179"}


id: PBO:0084875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; MRP21 exhibits genetic interactions with mutations in the COX2 and COX3 mRNA 5'-untranslated leader sequences","termid":"PBO:0084875"}


id: GO:0060016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a granulosa cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a granulosa cell fate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell development","termid":"GO:0002064"},{"relation_name":"part_of","term_name":"granulosa cell differentiation","termid":"GO:0060014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"granulosa cell development","termid":"GO:0060016"}


id: PR:000027551
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2A.2 phosphorylated 1 in Schizosaccharomyces pombe. Phosphorylation motif is SQE. Example: UniProtKB:P04910-1, Ser-128, MOD:00046.","definition_xrefs":["PomBase:MAH","PMID:15226425","PMID:21516229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A-beta (Schizosaccharomyces pombe 972h-)","termid":"PR:P04910"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hta2/Phos(S127)","pombase_gene_id":"SPAC19G12.06c","synonyms":[{"name":"PomBase_original_PRO_term_name: histone H2A-beta phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-HTA2/Phos:1","type":"exact"},{"name":"gamma-H2A (Schizosaccharomyces pombe)","type":"related"},{"name":"histone H2A.2 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"hta2/Phos(S127)","type":"exact"},{"name":"hta2/Phos:(S128)","type":"exact"}],"termid":"PR:000027551"}


id: PBO:0055147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2566","termid":"PBO:0055147"}


id: PBO:0030997
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromosome_morphology","termid":"PBO:0030997"}


id: PBO:0047556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGF12 antisense RNA 1","termid":"PBO:0047556"}


id: PBO:0091583
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human RAD1","termid":"PBO:0091583"}


id: GO:1902712
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of G protein-coupled GABA receptor activity. In human, it is usually a heterodimer composed of GABA-B receptor subunits 1 and 2.","definition_xrefs":["PMID:18790874","GOC:TermGenie","GOC:bhm","GO_REF:0000088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor dimeric complex","termid":"GO:0038037"},{"relation_name":"is_a","term_name":"GABA receptor complex","termid":"GO:1902710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"G protein-coupled GABA receptor complex","synonyms":[{"name":"G-protein coupled GABA receptor complex","type":"exact"}],"termid":"GO:1902712"}


id: GO:0034975
data:
  {"annotated_genes":["SJAG_03030","SJAG_03414","SJAG_00288","SJAG_02413","SJAG_01038","SJAG_02032","SJAG_05189","SJAG_02301","SJAG_02827","SJAG_01160","SJAG_00403","SJAG_04046","SJAG_03992","SJAG_02489","SJAG_02875"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84683,86947,88358,88382,91778,92402,98990,99248,101257,106028,106086,106885,109719,110844,114462],"is_not":false,"summary":null,"term":"GO:0034975"}]},"cv_name":"biological_process","definition":"A protein folding process that takes place in the endoplasmic reticulum (ER). Secreted, plasma membrane and organelle proteins are folded in the ER, assisted by chaperones and foldases (protein disulphide isomerases), and additional factors required for optimal folding (ATP, Ca2+ and an oxidizing environment to allow disulfide bond formation).","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein folding","termid":"GO:0006457"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00288":null,"SJAG_00403":null,"SJAG_01038":null,"SJAG_01160":null,"SJAG_02032":null,"SJAG_02301":null,"SJAG_02413":null,"SJAG_02489":null,"SJAG_02827":null,"SJAG_02875":null,"SJAG_03030":null,"SJAG_03414":null,"SJAG_03992":null,"SJAG_04046":null,"SJAG_05189":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006457"},{"rel_name":"part_of","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467","GO:0006457"],"is_obsolete":false,"name":"protein folding in endoplasmic reticulum","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"oxidative protein folding","type":"exact"},{"name":"protein folding in ER","type":"exact"}],"termid":"GO:0034975","terms_by_termid":{"GO:0034975":null}}


id: PBO:0048436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group)","termid":"PBO:0048436"}


id: PBO:0065830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB6D, member RAS oncogene family","termid":"PBO:0065830"}


id: PBO:0090626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoserine O-acetyltransferase","termid":"PBO:0090626"}


id: GO:0032254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a secretory granule to a specific location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of vesicle localization","termid":"GO:0051650"},{"relation_name":"part_of","term_name":"secretory granule localization","termid":"GO:0032252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of secretory granule localization","synonyms":[{"name":"establishment of secretory granule localisation","type":"exact"}],"termid":"GO:0032254"}


id: PBO:0064445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POC1B-GALNT4 readthrough","termid":"PBO:0064445"}


id: PBO:0086992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Required for splicing of the group I intron bI5 of the COB pre-mRNA; nuclear-encoded mitochondrial protein that binds to the RNA to promote splicing; also involved in but not essential for splicing of the COB bI2 intron and the intron in the 21S rRNA gene","termid":"PBO:0086992"}


id: PBO:0045036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dispatched RND transporter family member 1","termid":"PBO:0045036"}


id: PBO:0041688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium binding and coiled-coil domain 1","termid":"PBO:0041688"}


id: PBO:0091022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type transcription factor (Mc-like)","termid":"PBO:0091022"}


id: PBO:0078875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional repressor GATA binding 1","termid":"PBO:0078875"}


id: GO:0047681
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aromatic alcohol + NADP+ = an aromatic aldehyde + NADPH.","definition_xrefs":["MetaCyc:ARYL-ALCOHOL-DEHYDROGENASE-NADP+-RXN","EC:1.1.1.91"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"aryl-alcohol dehydrogenase (NADP+) activity","secondary_identifiers":["RHEA:17761"],"synonyms":[{"name":"NADPH-linked benzaldehyde reductase activity","type":"related"},{"name":"aryl alcohol dehydrogenase (nicotinamide adenine dinucleotide phosphate)","type":"related"},{"name":"aryl-alcohol:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0047681"}


id: PBO:0004851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho-type GTPase activating protein Rga1","termid":"PBO:0004851"}


id: PBO:0049226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor kinase 7","termid":"PBO:0049226"}


id: PBO:0073784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 5 member 4 pseudogene 1","termid":"PBO:0073784"}


id: GO:0102464
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: zeaxanthin + O2 + NADH + H+ = caloxanthin + H2O + NAD.","definition_xrefs":["GOC:pz","PMID:22509387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"zeaxanthin 2-beta-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-14016"],"termid":"GO:0102464"}


id: PBO:0027426
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_double-strand_break_repair_junction_in_presence_of_persistent_double-strand_breaks","termid":"PBO:0027426"}


id: PBO:0047749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folliculin interacting protein 2","termid":"PBO:0047749"}


id: PBO:0089635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, iron ion Mrs3","termid":"PBO:0089635"}


id: GO:1900714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of violaceol I biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of violaceol I biosynthetic process","termid":"GO:1900713"},{"relation_name":"negatively_regulates","term_name":"violaceol I biosynthetic process","termid":"GO:1900590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"negative regulation of violaceol I biosynthetic process","synonyms":[{"name":"down regulation of violaceol I anabolism","type":"exact"},{"name":"down regulation of violaceol I biosynthesis","type":"exact"},{"name":"down regulation of violaceol I biosynthetic process","type":"exact"},{"name":"down regulation of violaceol I formation","type":"exact"},{"name":"down regulation of violaceol I synthesis","type":"exact"},{"name":"down-regulation of violaceol I anabolism","type":"exact"},{"name":"down-regulation of violaceol I biosynthesis","type":"exact"},{"name":"down-regulation of violaceol I biosynthetic process","type":"exact"},{"name":"down-regulation of violaceol I formation","type":"exact"},{"name":"down-regulation of violaceol I synthesis","type":"exact"},{"name":"downregulation of violaceol I anabolism","type":"exact"},{"name":"downregulation of violaceol I biosynthesis","type":"exact"},{"name":"downregulation of violaceol I biosynthetic process","type":"exact"},{"name":"downregulation of violaceol I formation","type":"exact"},{"name":"downregulation of violaceol I synthesis","type":"exact"},{"name":"inhibition of violaceol I anabolism","type":"exact"},{"name":"inhibition of violaceol I biosynthesis","type":"exact"},{"name":"inhibition of violaceol I biosynthetic process","type":"narrow"},{"name":"inhibition of violaceol I formation","type":"exact"},{"name":"inhibition of violaceol I synthesis","type":"exact"},{"name":"negative regulation of violaceol I anabolism","type":"exact"},{"name":"negative regulation of violaceol I biosynthesis","type":"exact"},{"name":"negative regulation of violaceol I formation","type":"exact"},{"name":"negative regulation of violaceol I synthesis","type":"exact"}],"termid":"GO:1900714"}


id: PBO:0039776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 7 pseudogene 1","termid":"PBO:0039776"}


id: PBO:0058697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6825","termid":"PBO:0058697"}


id: PBO:0063203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(rC) binding protein 2","termid":"PBO:0063203"}


id: PR:O74361
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC28E12.04 gene.","definition_xrefs":["UniProtKB:O74361","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C28E12.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28E12.04","synonyms":[{"name":"Spom972h-SPBC28E12.04","type":"exact"}],"termid":"PR:O74361"}


id: FYPO:0005930
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the occurrence of chromatin binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type) at the centromere outer repeat region.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin binding","termid":"FYPO:0003086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000702"],"is_obsolete":false,"name":"normal chromatin binding at centromere outer repeat","synonyms":[{"name":"normal chromatin binding at centromere otr","type":"exact"},{"name":"normal chromatin binding at centromere outer repeat region","type":"exact"},{"name":"normal chromatin binding at centromeric outer repeat region","type":"exact"},{"name":"normal chromatin binding at pericentric region","type":"related"},{"name":"normal chromatin binding at pericentromeric region","type":"related"}],"termid":"FYPO:0005930"}


id: MOD:01074
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a napthylacetyl group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"napthylacetyl modified residue","termid":"MOD:01074"}


id: PBO:0045267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 like","termid":"PBO:0045267"}


id: PBO:0080051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 22","termid":"PBO:0080051"}


id: PBO:0052259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 1B","termid":"PBO:0052259"}


id: PBO:0051728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 1","termid":"PBO:0051728"}


id: MOD:00794
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00477. Remap to MOD:00477.","definition_xrefs":["PubMed:9252331","Unimod:369"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00794 pyrrolidone from proline (obsolete MOD:00794)","synonyms":[{"name":"Pro->Pyrrolidone","type":"related"},{"name":"Pyrrolidone from Proline","type":"related"}],"termid":"MOD:00794"}


id: PBO:0071487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 28","termid":"PBO:0071487"}


id: PBO:0080538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASP like actin nucleation promoting factor","termid":"PBO:0080538"}


id: GO:1901147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any mesenchymal cell apoptotic process that is involved in metanephric nephron morphogenesis.","definition_xrefs":["GOC:mtg_apoptosis","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell apoptotic process involved in metanephros development","termid":"GO:1900200"},{"relation_name":"is_a","term_name":"mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:1901145"},{"relation_name":"part_of","term_name":"metanephric nephron morphogenesis","termid":"GO:0072273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis","termid":"GO:1901147"}


id: GO:0005290
data:
  {"annotated_genes":["SJAG_03400","SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93428,99908],"is_not":false,"summary":null,"term":"GO:0005290"}]},"cv_name":"molecular_function","definition":"Enables the transfer of L-histidine from one side of a membrane to the other. L-histidine is 2-amino-3-(1H-imidazol-4-yl)propanoic acid.","definition_xrefs":["ISBN:0815340729","GOC:ai","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"aromatic amino acid transmembrane transporter activity","termid":"GO:0015173"},{"relation_name":"is_a","term_name":"basic amino acid transmembrane transporter activity","termid":"GO:0015174"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"azole transmembrane transporter activity","termid":"GO:1901474"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03256":null,"SJAG_03400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"L-histidine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-histidine transporter activity","type":"broad"},{"name":"histidine/arginine/lysine/ornithine porter activity","type":"narrow"}],"termid":"GO:0005290","terms_by_termid":{"GO:0005290":null}}


id: PBO:0070438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPH3AL antisense RNA 1","termid":"PBO:0070438"}


id: PBO:0012570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome complex subunit Ecm29","termid":"PBO:0012570"}


id: GO:1903473
data:
  {"annotated_genes":["SJAG_04597","SJAG_04776","SJAG_03936","SJAG_03581","SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83611,90470,90639,106578,109425],"is_not":false,"summary":null,"term":"GO:1903473"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic actomyosin contractile ring contraction.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:1234","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cytokinetic process","termid":"GO:1903438"},{"relation_name":"is_a","term_name":"regulation of mitotic actomyosin contractile ring contraction","termid":"GO:1903471"},{"relation_name":"positively_regulates","term_name":"mitotic actomyosin contractile ring contraction","termid":"GO:1902404"}],"gene_count":5,"genes_by_uniquename":{"SJAG_03581":null,"SJAG_03631":null,"SJAG_03936":null,"SJAG_04597":null,"SJAG_04776":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0000281"}],"interesting_parent_ids":["GO:0007010","GO:0000281","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of mitotic actomyosin contractile ring contraction","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of contractile ring contraction involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"narrow"},{"name":"activation of cytokinesis, actomyosin ring contraction involved in mitotic cell cycle","type":"narrow"},{"name":"activation of mitotic actomyosin contractile ring contraction","type":"narrow"},{"name":"positive regulation of contractile ring contraction involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"positive regulation of cytokinesis, actomyosin ring contraction involved in mitotic cell cycle","type":"exact"},{"name":"positive regulation of mitotic actomyosin contractile ring constriction","type":"exact"},{"name":"up regulation of contractile ring contraction involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"up regulation of cytokinesis, actomyosin ring contraction involved in mitotic cell cycle","type":"exact"},{"name":"up regulation of mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"up-regulation of contractile ring contraction involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"up-regulation of cytokinesis, actomyosin ring contraction involved in mitotic cell cycle","type":"exact"},{"name":"up-regulation of mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"upregulation of contractile ring contraction involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"upregulation of cytokinesis, actomyosin ring contraction involved in mitotic cell cycle","type":"exact"},{"name":"upregulation of mitotic actomyosin contractile ring contraction","type":"exact"}],"termid":"GO:1903473","terms_by_termid":{"GO:1903473":null}}


id: PBO:0028414
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_glycerol_level","termid":"PBO:0028414"}


id: SO:1000127
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000127 sequence_variant_causing_compensatory_transcript_secondary_structure_mutation (obsolete SO:1000127)","synonyms":[{"name":"mutation causing compensatory transcript secondary structure mutation","type":"related"},{"name":"sequence variant causing compensatory transcript secondary structure mutation","type":"exact"}],"termid":"SO:1000127"}


id: PBO:0085545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; overproduction suppresses mutations affecting RNA polymerase III-dependent transcription; homologous to mammalian ribosomal protein S20 and bacterial S10","termid":"PBO:0085545"}


id: RO:0009001
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"\\\"has substance added\\\" is a relation existing between a (physical) entity and a substance in which the entity has had the substance added to it at some point in time.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_substance_added","termid":"RO:0009001"}


id: GO:0032708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-24 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-24 production","termid":"GO:0032668"},{"relation_name":"negatively_regulates","term_name":"interleukin-24 production","termid":"GO:0032628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-24 production","secondary_identifiers":["GO:0045532"],"synonyms":[{"name":"down regulation of interleukin-24 production","type":"exact"},{"name":"down-regulation of interleukin-24 production","type":"exact"},{"name":"downregulation of interleukin-24 production","type":"exact"},{"name":"inhibition of interleukin-24 production","type":"narrow"},{"name":"negative regulation of IL-24 production","type":"exact"},{"name":"negative regulation of interleukin-24 biosynthetic process","type":"narrow"}],"termid":"GO:0032708"}


id: PBO:0075817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"slingshot protein phosphatase 1","termid":"PBO:0075817"}


id: PBO:0082031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"14-3-3 protein, minor isoform; controls proteome at post-transcriptional level, binds proteins and DNA, involved in regulation of many processes including exocytosis, vesicle transport, Ras/MAPK signaling, and rapamycin-sensitive signaling; protein increases in abundance and relative distribution to the nucleus increases upon DNA replication stress; abundance relative to Bmh1p increases during sporulation","termid":"PBO:0082031"}


id: PBO:0083042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"De novo-originated gene from non-coding sequence; protein can suppress mating and promote vegetative growth; shortens lag phase by physically interacting with Snf1p; binds with Matalpha2p to promoters of haploid-specific genes; functions in mating and fermentation, mediates crosstalk between reproduction and vegetative growth; required for survival upon exposure to K1 killer toxin; involved in ion homeostasis","termid":"PBO:0083042"}


id: PBO:0078843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon TGG) 5-1","termid":"PBO:0078843"}


id: PBO:0045274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 25","termid":"PBO:0045274"}


id: PBO:0079491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TXNDC11 antisense RNA 1","termid":"PBO:0079491"}


id: GO:1901063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of guaiacyl lignin.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignin biosynthetic process","termid":"GO:0009809"},{"relation_name":"is_a","term_name":"guaiacyl lignin metabolic process","termid":"GO:1901061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"guaiacyl lignin biosynthetic process","synonyms":[{"name":"G-lignin biosynthetic process","type":"exact"},{"name":"guaiacyl lignin anabolism","type":"exact"},{"name":"guaiacyl lignin biosynthesis","type":"exact"},{"name":"guaiacyl lignin formation","type":"exact"},{"name":"guaiacyl lignin synthesis","type":"exact"}],"termid":"GO:1901063"}


id: GO:0061363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the biosynthesis of progesterone biosynthesis that contributes to luteolysis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of progesterone biosynthetic process","termid":"GO:2000183"},{"relation_name":"part_of","term_name":"luteolysis","termid":"GO:0001554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of progesterone biosynthesis involved in luteolysis","synonyms":[{"name":"functional luteolysis","type":"exact"}],"termid":"GO:0061363"}


id: PBO:0048253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactose-3-O-sulfotransferase 1","termid":"PBO:0048253"}


id: GO:0007311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Polarization of the oocyte along the dorsal-ventral axis, by a gene product encoded by cells of the germ line. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:tb","GOC:mtg_sensu","ISBN:0879694238","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oocyte dorsal/ventral axis specification","termid":"GO:0007310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maternal specification of dorsal/ventral axis, oocyte, germ-line encoded","secondary_identifiers":["GO:0048124"],"synonyms":[{"name":"maternal determination of dorsal/ventral axis, oocyte, germ-line encoded","type":"exact"},{"name":"maternal specification of dorsal-ventral axis, oocyte, germ-line encoded","type":"exact"},{"name":"maternal specification of dorsoventral axis, oocyte, germ-line encoded","type":"exact"}],"termid":"GO:0007311"}


id: GO:0048918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the posterior lateral line nerve over time, from its formation to the mature structure. The posterior lateral line nerve innervates hair cells of the PLL and projects to an octavolateralis column in the hindbrain that consists of the medial octavolateralis nucleus (MON), the caudal octavolateralis nucleus, and the magnocellular nucleus.","definition_xrefs":["GOC:dgh","GOC:cls","GOC:dph","GO_REF:0000021","GOC:jid","ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line nerve development","termid":"GO:0048892"},{"relation_name":"part_of","term_name":"posterior lateral line system development","termid":"GO:0048915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line nerve development","secondary_identifiers":["GO:0021733"],"synonyms":[{"name":"PLLN development","type":"exact"},{"name":"caudal lateral line nerve development","type":"exact"}],"termid":"GO:0048918"}


id: PBO:0034813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein associated with respiratory chain (predicted)","termid":"PBO:0034813"}


id: PBO:0074322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMARCA4 interacting SWI/SNF chromatin remodeling complex scaffold lncRNA","termid":"PBO:0074322"}


id: GO:0110017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process where translation initiation recruits the 40S ribosomal subunits in a cap and 5' end independent fashion before an AUG codon is encountered in an appropriate sequence context to initiate linear mRNA translation.","definition_xrefs":["GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cap-independent translational initiation","termid":"GO:0002190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0002181"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0002181","GO:0008150"],"is_obsolete":false,"name":"cap-independent translational initiation of linear mRNA","termid":"GO:0110017"}


id: PBO:0064740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 76","termid":"PBO:0064740"}


id: GO:0050650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of chondroitin sulfate proteoglycan, any glycoprotein whose glycosaminoglycan units are chondroitin sulfate. Chondroitin sulfates are a group of 10-60 kDa glycosaminoglycans, widely distributed in cartilage and other mammalian connective tissues; the repeat units consist of beta-(1,4)-linked D-glucuronyl beta-(1,3)-N-acetyl-D-galactosamine sulfate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan biosynthetic process","termid":"GO:0030166"},{"relation_name":"is_a","term_name":"chondroitin sulfate proteoglycan metabolic process","termid":"GO:0050654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chondroitin sulfate proteoglycan biosynthetic process","synonyms":[{"name":"chondroitin sulfate proteoglycan anabolism","type":"exact"},{"name":"chondroitin sulfate proteoglycan biosynthesis","type":"exact"},{"name":"chondroitin sulfate proteoglycan formation","type":"exact"},{"name":"chondroitin sulfate proteoglycan synthesis","type":"exact"},{"name":"chondroitin sulphate proteoglycan biosynthesis","type":"exact"},{"name":"chondroitin sulphate proteoglycan biosynthetic process","type":"exact"}],"termid":"GO:0050650"}


id: PBO:0012267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIP/FAR complex striatin subunit, Far8/Csc3","termid":"PBO:0012267"}


id: PBO:0013801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthase Arg12","termid":"PBO:0013801"}


id: PBO:0113434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Splicing factor; component of the U4/U6-U5 snRNP complex; homologous to human PRPF31 and used to study retinitis pigmentosa","termid":"PBO:0113434"}


id: PBO:0061407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPSR1 antisense RNA 1","termid":"PBO:0061407"}


id: PBO:0035870
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_spindle_elongation_with_incomplete,_unequal_mitotic_sister_chromatid_segregation_and_unseparated_DNA","termid":"PBO:0035870"}


id: MOD:01298
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct of an L-cysteine residue with 4-hydroxynonenal artificially reduced by a reagent such as NaBH4.","definition_xrefs":["PubMed:11910026","PubMed:15133838","Unimod:335#C"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"cysteine 4-hydroxynonenal adduct","termid":"MOD:01237"},{"relation_name":"is_a","term_name":"reduced 4-hydroxynonenal adduct","termid":"MOD:00642"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reduced cysteine 4-hydroxynonenal adduct","synonyms":[{"name":"HNE+Delta:H(2)","type":"related"},{"name":"reduced 4-Hydroxynonenal","type":"related"}],"termid":"MOD:01298"}


id: GO:0043311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of eosinophil degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myeloid leukocyte mediated immunity","termid":"GO:0002888"},{"relation_name":"is_a","term_name":"positive regulation of leukocyte degranulation","termid":"GO:0043302"},{"relation_name":"is_a","term_name":"regulation of eosinophil degranulation","termid":"GO:0043309"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"eosinophil degranulation","termid":"GO:0043308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"positive regulation of eosinophil degranulation","synonyms":[{"name":"activation of eosinophil degranulation","type":"narrow"},{"name":"positive regulation of eosinophil granule exocytosis","type":"exact"},{"name":"stimulation of eosinophil degranulation","type":"narrow"},{"name":"up regulation of eosinophil degranulation","type":"exact"},{"name":"up-regulation of eosinophil degranulation","type":"exact"},{"name":"upregulation of eosinophil degranulation","type":"exact"}],"termid":"GO:0043311"}


id: FYPO:0002718
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell septum is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell division site","termid":"FYPO:0001401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to septum","synonyms":[{"name":"abnormal protein localisation to septum","type":"exact"},{"name":"abnormal protein localization to cell septum","type":"exact"},{"name":"abnormal protein localization to division septum","type":"exact"},{"name":"abnormal protein localization to septum during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to septum during vegetative growth","type":"exact"}],"termid":"FYPO:0002718"}


id: PBO:0078552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 42","termid":"PBO:0078552"}


id: PR:O14169
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pgc1 gene.","definition_xrefs":["UniProtKB:O14169","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylglycerol phospholipase C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.02c","synonyms":[{"name":"Spom972h-pgc1","type":"exact"}],"termid":"PR:O14169"}


id: GO:0003959
data:
  {"annotated_genes":["SJAG_05015"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103114],"is_not":false,"summary":null,"term":"GO:0003959"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + H+ + acceptor = NADP+ + reduced acceptor.","definition_xrefs":["RHEA:13149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H","termid":"GO:0016651"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05015":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"NADPH dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9018867","EC:1.6.99.1","Reactome:R-HSA-9027631","MetaCyc:NADPH-DEHYDROGENASE-RXN","Reactome:R-HSA-9027625","GO:0008468","Reactome:R-HSA-9027632","GO:0016660","Reactome:R-HSA-9018901"],"synonyms":[{"name":"NADPH diaphorase activity","type":"related"},{"name":"NADPH-dehydrogenase activity","type":"related"},{"name":"NADPH2 diaphorase activity","type":"related"},{"name":"NADPH2-dehydrogenase activity","type":"related"},{"name":"NADPH:(acceptor) oxidoreductase activity","type":"related"},{"name":"NADPH:acceptor oxidoreductase activity","type":"related"},{"name":"OYE","type":"related"},{"name":"TPNH dehydrogenase activity","type":"related"},{"name":"TPNH-diaphorase activity","type":"related"},{"name":"dihydronicotinamide adenine dinucleotide phosphate dehydrogenase activity","type":"related"},{"name":"old yellow enzyme","type":"related"},{"name":"reduced nicotinamide adenine dinucleotide phosphate dehydrogenase activity","type":"related"},{"name":"triphosphopyridine diaphorase activity","type":"related"},{"name":"triphosphopyridine nucleotide diaphorase activity","type":"related"}],"termid":"GO:0003959","terms_by_termid":{"GO:0003959":null}}


id: GO:0046275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of flavonoids, a group of phenolic derivatives containing a flavan skeleton.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"flavonoid metabolic process","termid":"GO:0009812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flavonoid catabolic process","synonyms":[{"name":"flavonoid breakdown","type":"exact"},{"name":"flavonoid catabolism","type":"exact"},{"name":"flavonoid degradation","type":"exact"}],"termid":"GO:0046275"}


id: GO:0004169
data:
  {"annotated_genes":["SJAG_04053","SJAG_04316","SJAG_01491"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89083,97598,100147],"is_not":false,"summary":null,"term":"GO:0004169"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: dolichyl phosphate D-mannose + protein = dolichyl phosphate + O-D-mannosylprotein.","definition_xrefs":["EC:2.4.1.109","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase activity","termid":"GO:0000030"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01491":null,"SJAG_04053":null,"SJAG_04316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"dolichyl-phosphate-mannose-protein mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:2.4.1.109-RXN","Reactome:R-HSA-5615637","Reactome:R-HSA-5615604","Reactome:R-HSA-5615556"],"synonyms":[{"name":"O-glycoside mannosyltransferase","type":"broad"},{"name":"dolichol phosphomannose-protein mannosyltransferase activity","type":"related"},{"name":"dolichyl-phosphate-D-mannose:protein O-D-mannosyltransferase activity","type":"related"},{"name":"dolichyl-phosphate-mannose-protein O-mannosyltransferase activity","type":"exact"},{"name":"protein O-D-mannosyltransferase activity","type":"related"},{"name":"protein O-mannosyltransferase activity","type":"exact"}],"termid":"GO:0004169","terms_by_termid":{"GO:0004169":null}}


id: PBO:0111743
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein","termid":"PBO:0111743"}


id: PBO:0081650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 575","termid":"PBO:0081650"}


id: GO:0004634
data:
  {"annotated_genes":["SJAG_00461","SJAG_02107","SJAG_02369"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101508,101509,101510],"is_not":false,"summary":null,"term":"GO:0004634"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-phospho-D-glycerate = phosphoenolpyruvate + H2O.","definition_xrefs":["EC:4.2.1.11","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00461":null,"SJAG_02107":null,"SJAG_02369":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"phosphopyruvate hydratase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-70494","MetaCyc:2PGADEHYDRAT-RXN","Reactome:R-HSA-71660","RHEA:10164"],"synonyms":[{"name":"14-3-2-protein","type":"related"},{"name":"2-phospho-D-glycerate hydro-lyase (phosphoenolpyruvate-forming)","type":"related"},{"name":"2-phospho-D-glycerate hydro-lyase activity","type":"related"},{"name":"2-phospho-D-glycerate-hydrolase activity","type":"exact"},{"name":"2-phosphoglycerate dehydratase activity","type":"related"},{"name":"2-phosphoglycerate enolase activity","type":"related"},{"name":"2-phosphoglyceric dehydratase activity","type":"related"},{"name":"enolase activity","type":"related"},{"name":"gamma-enolase activity","type":"related"},{"name":"nervous-system specific enolase","type":"narrow"},{"name":"phosphoenolpyruvate hydratase activity","type":"related"}],"termid":"GO:0004634","terms_by_termid":{"GO:0004634":null}}


id: GO:0071906
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CRD (context dependent regulatory) domain, a domain of about 130 residues that is the most divergent region among the LEF/TCF proteins.","definition_xrefs":["GOC:yaf","PMID:19460168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"CRD domain binding","synonyms":[{"name":"context dependent regulatory domain binding","type":"exact"}],"termid":"GO:0071906"}


id: PBO:0028614
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_ADP_binding","termid":"PBO:0028614"}


id: PBO:0083247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; identified based on homology to hemiascomycetous yeasts","termid":"PBO:0083247"}


id: FYPO:0000833
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"},{"relation_name":"is_a","term_name":"normal protein level","termid":"FYPO:0004083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal protein level during vegetative growth","synonyms":[{"name":"normal protein level during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000833"}


id: PBO:0072184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17","termid":"PBO:0072184"}


id: PBO:0000712
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multicopy suppressor of Overexpressed Cyr1","termid":"PBO:0000712"}


id: GO:0060307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the establishment or extent of a membrane potential in the polarizing direction towards the resting potential in a ventricular cardiomyocyte.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell membrane repolarization","termid":"GO:0099623"},{"relation_name":"regulates","term_name":"ventricular cardiac muscle cell membrane repolarization","termid":"GO:0099625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ventricular cardiac muscle cell membrane repolarization","synonyms":[{"name":"electrocardiogram T wave","type":"related"},{"name":"regulation of ventricular cardiac muscle cell repolarization","type":"exact"},{"name":"regulation of ventricular cardiac muscle repolarization","type":"related"},{"name":"regulation of ventricular cardiomyocyte membrane repolarization","type":"exact"},{"name":"ventricular repolarization","type":"related"}],"termid":"GO:0060307"}


id: PBO:0044861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DAP3 binding cell death enhancer 1","termid":"PBO:0044861"}


id: SO:0000055
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of chromosome variation where the chromosome complement is not an exact multiple of the haploid number as extra chromosomes are present.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aneuploid","termid":"SO:0000054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperploid","secondary_identifiers":["http://en.wikipedia.org/wiki/Hyperploid"],"termid":"SO:0000055"}


id: PBO:0080981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 16","termid":"PBO:0080981"}


id: PBO:0027462
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_error-prone_translesion_synthesis","termid":"PBO:0027462"}


id: GO:1990147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a talin, a family of related cytoskeletal proteins that play a role in assembly of actin filaments and migration of various cell types.","definition_xrefs":["GOC:hjd","PMID:23372168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0008092","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"talin binding","termid":"GO:1990147"}


id: FYPO:0002547
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to nicotinamide. Cells stop growing (and may die) at a concentration of nicotinamide that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002683","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to nicotinamide","synonyms":[{"name":"hypersensitive to nicotinamide","type":"exact"},{"name":"sensitive to nicotinamide during mitotic cell cycle","type":"related"},{"name":"sensitive to nicotinamide during vegetative growth","type":"exact"}],"termid":"FYPO:0002547"}


id: GO:0003272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of an endocardial cushion. The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves.","definition_xrefs":["PMID:15797462","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"endocardial cushion morphogenesis","termid":"GO:0003203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cushion formation","termid":"GO:0003272"}


id: PBO:0028068
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_crossover_junction_endodeoxyribonuclease_activity","termid":"PBO:0028068"}


id: PBO:0065134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein activator of interferon induced protein kinase EIF2AK2 pseudogene 1","termid":"PBO:0065134"}


id: PBO:0063246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha 11","termid":"PBO:0063246"}


id: PBO:0078474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyrotropin releasing hormone degrading enzyme","termid":"PBO:0078474"}


id: PBO:0090492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane anchored protein, claudin family, predicted membrane sensor Mac1","termid":"PBO:0090492"}


id: GO:1902602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of aluminium ions across a membrane.","definition_xrefs":["GO_REF:0000069","GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic ion transmembrane transport","termid":"GO:0098660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"aluminum ion transmembrane transport","synonyms":[{"name":"aluminium ion transmembrane transport","type":"exact"},{"name":"aluminium transmembrane transport","type":"broad"},{"name":"aluminum transmembrane transport","type":"broad"}],"termid":"GO:1902602"}


id: GO:0009535
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The pigmented membrane of a chloroplast thylakoid. An example of this component is found in Arabidopsis thaliana.","definition_xrefs":["GOC:lr","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle outer membrane","termid":"GO:0031968"},{"relation_name":"is_a","term_name":"plastid thylakoid membrane","termid":"GO:0055035"},{"relation_name":"part_of","term_name":"chloroplast thylakoid","termid":"GO:0009534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chloroplast thylakoid membrane","termid":"GO:0009535"}


id: PBO:0078605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 18","termid":"PBO:0078605"}


id: GO:0102956
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + sinapoyl aldehyde = H+ + sinapaldehyde glucoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-glucose:sinapaldehyde 4-beta-D-glucosyltransferase activity (obsolete GO:0102956)","termid":"GO:0102956"}


id: PATO:0000143
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000143 addictive substance (obsolete PATO:0000143)","termid":"PATO:0000143"}


id: GO:0140850
data:
  {"annotated_genes":["SJAG_02319","SJAG_03006"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112285,114906],"is_not":false,"summary":null,"term":"GO:0140850"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a ubiquitin molecule to a histone 2B at the conserved C-terminal lysine (K) residue. The last K residue is at position 119 in fission yeast, 123 in budding yeast, and 120 in mammals.","definition_xrefs":["PMID:17363370","PMID:28624371"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2B ubiquitin ligase activity","termid":"GO:0141054"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02319":null,"SJAG_03006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004842"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0016746","GO:0004842","GO:0019787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"histone H2B C-terminal K residue ubiquitin ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone H2B conserved C-terminal lysine ubiquitin ligase activity","type":"exact"},{"name":"histone H2B-K120 ubiquitin ligase activity","type":"exact"},{"name":"histone H2BK120 ubiquitin ligase activity","type":"exact"},{"name":"histone ubiquitin ligase activity (H2B-K120 specific)","type":"exact"}],"termid":"GO:0140850","terms_by_termid":{"GO:0140850":null}}


id: GO:0002580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antigen processing and presentation of antigen (peptide or polysaccharide) via MHC class II.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation","termid":"GO:0002577"},{"relation_name":"regulates","term_name":"antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","synonyms":[{"name":"regulation of peptide or polysaccharide antigen processing and presentation via MHC class II","type":"exact"}],"termid":"GO:0002580"}


id: PBO:0028888
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_antisense_RNA_transcription","termid":"PBO:0028888"}


id: PBO:0084048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein; negatively regulates RAS by converting it from GTP- to the GDP-bound inactive form, required for reducing cAMP levels under nutrient limiting conditions, mediates membrane association of adenylate cyclase; mutations cause catalase T deficiency, defective glycogen synthesis and defective trehalose accumulation; IRA1 has a paralog, IRA2, that arose from the whole genome duplication; defects in human homolog NF1 are associated with neurofibromatosis","termid":"PBO:0084048"}


id: GO:0034678
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alpha8 subunit and one beta1 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"integrin alpha8-beta1 complex","synonyms":[{"name":"ITGA8-ITGB1 complex","type":"narrow"},{"name":"alpha8-beta1 integrin complex","type":"exact"}],"termid":"GO:0034678"}


id: PBO:0057284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 504","termid":"PBO:0057284"}


id: PBO:0069273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 529, pseudogene","termid":"PBO:0069273"}


id: GO:0034313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a diol, any alcohol containing two hydroxyl groups attached to saturated carbon atoms.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diol metabolic process","termid":"GO:0034311"},{"relation_name":"is_a","term_name":"polyol catabolic process","termid":"GO:0046174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"diol catabolic process","synonyms":[{"name":"dihydric alcohol catabolic process","type":"exact"},{"name":"diol breakdown","type":"exact"},{"name":"diol catabolism","type":"exact"},{"name":"diol degradation","type":"exact"}],"termid":"GO:0034313"}


id: PBO:0109020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEP192 pseudogene 1","termid":"PBO:0109020"}


id: PBO:0045988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EI24 pseudogene 2","termid":"PBO:0045988"}


id: PR:O59826
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A voltage-gated potassium channel subunit beta-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage-gated potassium channel subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC965.06","secondary_identifiers":["UniProtKB:O59826"],"synonyms":[{"name":"K(+) channel subunit beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-KCNAB1","type":"exact"}],"termid":"PR:O59826"}


id: MOD:01118
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-N-6-phosphogluconoylation (His Tagged proteins)","termid":"MOD:01118"}


id: FYPO:0003258
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of proline into the cell occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased amino acid import during vegetative growth","termid":"FYPO:0003169"},{"relation_name":"is_a","term_name":"abnormal proline import","termid":"FYPO:0003256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"increased proline import","synonyms":[{"name":"increased L-proline import","type":"narrow"},{"name":"increased L-proline import across plasma membrane","type":"exact"},{"name":"increased proline import during mitotic cell cycle","type":"related"},{"name":"increased proline import during vegetative growth","type":"exact"},{"name":"increased proline import into cell","type":"exact"},{"name":"increased proline uptake","type":"exact"}],"termid":"FYPO:0003258"}


id: PBO:0029554
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_ethyl_methanesulfonate","termid":"PBO:0029554"}


id: GO:0031067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the removal of acetyl groups to histones in centromeric DNA.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone deacetylation at centromere (obsolete GO:0031067)","synonyms":[{"name":"down regulation of histone deacetylation at centromere","type":"exact"},{"name":"down-regulation of histone deacetylation at centromere","type":"exact"},{"name":"downregulation of histone deacetylation at centromere","type":"exact"},{"name":"inhibition of histone deacetylation at centromere","type":"narrow"}],"termid":"GO:0031067"}


id: GO:1905063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vascular smooth muscle cell differentiation.","definition_xrefs":["GOC:BHF_miRNA","GOC:TermGenie","GOC:BHF","GO_REF:0000058","GOC:rph","PMID:19088079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle cell differentiation","termid":"GO:0051150"},{"relation_name":"regulates","term_name":"vascular associated smooth muscle cell differentiation","termid":"GO:0035886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular associated smooth muscle cell differentiation","synonyms":[{"name":"regulation of VSMC differentiation","type":"exact"},{"name":"regulation of vascular smooth muscle cell differentiation","type":"exact"}],"termid":"GO:1905063"}


id: PBO:0077143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tight junction protein 3","termid":"PBO:0077143"}


id: GO:1903649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cytoplasmic transport.","definition_xrefs":["PMID:25049409","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cytoplasmic transport (obsolete GO:1903649)","synonyms":[{"name":"regulation of cytoplasmic streaming","type":"narrow"}],"termid":"GO:1903649"}


id: PBO:0051019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor binding protein acid labile subunit","termid":"PBO:0051019"}


id: PBO:0045482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DS cell adhesion molecule","termid":"PBO:0045482"}


id: PBO:0054030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1361","termid":"PBO:0054030"}


id: GO:0102357
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: mithramycin + NADP = mithramycin DK + NADPH + H+.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"mithramycin dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-13385"],"termid":"GO:0102357"}


id: PBO:0111839
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin Kar3 subfamily","termid":"PBO:0111839"}


id: GO:0010099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of photomorphogenesis.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"is_a","term_name":"regulation of response to red or far red light","termid":"GO:2000030"},{"relation_name":"regulates","term_name":"photomorphogenesis","termid":"GO:0009640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of photomorphogenesis","termid":"GO:0010099"}


id: FYPO:0000651
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of septum assembly is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum assembly","termid":"FYPO:0000117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0000002","FYPO:0000032"],"is_obsolete":false,"name":"increased duration of septum assembly","secondary_identifiers":["FYPO:0000649"],"synonyms":[{"name":"increased division septum formation involved in mitotic cytokinesis","type":"related"},{"name":"increased duration of division septum assembly","type":"exact"},{"name":"increased duration of division septum formation involved in mitotic cytokinesis","type":"exact"},{"name":"increased duration of septation","type":"broad"},{"name":"increased duration of septum assembly during mitotic cell cycle","type":"related"},{"name":"increased duration of septum assembly during vegetative growth","type":"exact"},{"name":"increased duration of septum formation","type":"broad"},{"name":"increased septation","type":"related"},{"name":"increased septum formation","type":"related"},{"name":"prolonged septum assembly","type":"exact"}],"termid":"FYPO:0000651"}


id: GO:0006370
data:
  {"annotated_genes":["SJAG_01713","SJAG_04034","SJAG_04488","SJAG_01724"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95040,103748,104273,112826],"is_not":false,"summary":null,"term":"GO:0006370"}]},"cv_name":"biological_process","definition":"The sequence of enzymatic reactions by which the mRNA 5' cap structure, an inverted 7-methylguanosine linked via a 5'-5' triphosphate bridge (m7G(5')ppp(5')X) to the first transcribed residue, is added to a nascent transcript. Additional methylation can occur on the ribose sugars of the first and second nucleotides adjacent to the m7G nRNA cap. These methylations are often referred to as N6,2'-O-dimethyladenosine (m6,2A) and N6,2'-O-dimethylguanosine (m6,2G), respectively.","definition_xrefs":["PMID:9266685","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA processing","termid":"GO:0006397"},{"relation_name":"is_a","term_name":"7-methylguanosine RNA capping","termid":"GO:0009452"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01713":null,"SJAG_01724":null,"SJAG_04034":null,"SJAG_04488":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"7-methylguanosine mRNA capping","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"5' end capping","type":"broad"},{"name":"5' mRNA capping","type":"exact"},{"name":"5'-end mRNA processing","type":"exact"},{"name":"5'-end processing","type":"broad"},{"name":"mRNA capping","type":"exact"}],"termid":"GO:0006370","terms_by_termid":{"GO:0006370":null}}


id: PR:O74366
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A general transcription factor IIH subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02813","PANTHER:PTHR12831:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transcription factor B subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30B4.07c","secondary_identifiers":["UniProtKB:O74366"],"synonyms":[{"name":"RNA polymerase II transcription factor B 34 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II transcription factor B p34 subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GTF2H3","type":"exact"}],"termid":"PR:O74366"}


id: PBO:0072002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 4","termid":"PBO:0072002"}


id: GO:0060129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized structural and/or functional features of a thyroid-stimulating hormone-secreting cell. A thyroid-stimulating hormone-secreting cell is a basophil cell of the anterior pituitary that produces thyroid-stimulating hormone, thyrotrophin.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glandular epithelial cell differentiation","termid":"GO:0002067"},{"relation_name":"is_a","term_name":"neuroendocrine cell differentiation","termid":"GO:0061101"},{"relation_name":"part_of","term_name":"adenohypophysis development","termid":"GO:0021984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thyroid-stimulating hormone-secreting cell differentiation","synonyms":[{"name":"TSH-secreting cell differentiation","type":"exact"},{"name":"beta-basophil differentiation","type":"exact"},{"name":"thyroid stimulating hormone secreting cell differentiation","type":"exact"},{"name":"thyrotrope differentiation","type":"exact"},{"name":"thyrotroph differentiation","type":"exact"}],"termid":"GO:0060129"}


id: PBO:0029027
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_mitotic_spindle","termid":"PBO:0029027"}


id: GO:1905131
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of carcinine from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie","PMID:26653853","GO_REF:0000070","GOC:dph","PMID:26713872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"},{"relation_name":"is_a","term_name":"azole transmembrane transporter activity","termid":"GO:1901474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"carcinine transmembrane transporter activity","termid":"GO:1905131"}


id: PBO:0014605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sm snRNP core protein Smg1","termid":"PBO:0014605"}


id: PBO:0082793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the U2 snRNP; required for the first catalytic step of splicing and for spliceosomal assembly; interacts with Rds3p and is required for Mer1p-activated splicing; diploid mutants have a specific defect in MATa1 pre-mRNA splicing which leads to haploid gene expression in diploids","termid":"PBO:0082793"}


id: GO:1990808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an F-BAR domain of a protein, a domain of about 60 residues that occurs in a wide range of cytoskeletal proteins.","definition_xrefs":["PMID:20603077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"F-bar domain binding","termid":"GO:1990808"}


id: PBO:0088777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron responsive transcriptional regulator, peptidase family","termid":"PBO:0088777"}


id: PBO:0081320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 106","termid":"PBO:0081320"}


id: GO:0015980
data:
  {"annotated_genes":["SJAG_01524","SJAG_01209","SJAG_00976","SJAG_00755","SJAG_MIT20","SJAG_01490","SJAG_01671","SJAG_02504","SJAG_02646","SJAG_03290","SJAG_02006","SJAG_01539","SJAG_02105","SJAG_03920","SJAG_02178","SJAG_02158","SJAG_00915","SJAG_01753","SJAG_03851","SJAG_01080","SJAG_03822","SJAG_01561","SJAG_01355","SJAG_02398","SJAG_00836","SJAG_03813","SJAG_01630","SJAG_01089","SJAG_02433","SJAG_01922","SJAG_04152","SJAG_03743","SJAG_00115","SJAG_00080","SJAG_01376","SJAG_02076","SJAG_00963","SJAG_01190","SJAG_MIT15","SJAG_01414","SJAG_03163","SJAG_01895","SJAG_04843","SJAG_01402","SJAG_02564","SJAG_01783","SJAG_05629","SJAG_00542","SJAG_02592","SJAG_06309","SJAG_00601","SJAG_00133","SJAG_03588","SJAG_00240","SJAG_03370","SJAG_07006","SJAG_01970","SJAG_MIT03","SJAG_02598","SJAG_00985","SJAG_03114","SJAG_07003","SJAG_04495","SJAG_03064","SJAG_00866","SJAG_MIT37","SJAG_MIT09","SJAG_03964","SJAG_03442","SJAG_02744","SJAG_01319","SJAG_03925","SJAG_04963","SJAG_07007","SJAG_00438","SJAG_01077","SJAG_MIT04","SJAG_00260","SJAG_05204","SJAG_01062","SJAG_00698","SJAG_06382","SJAG_00570","SJAG_MIT13","SJAG_01763","SJAG_05006","SJAG_00522","SJAG_00132","SJAG_04122","SJAG_02464","SJAG_04067","SJAG_03490"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83503,114521,91063,110303,95090,104646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009060"},{"annotations":[91852,107848,102956,110576,102720,102955,111918,85168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006112"},{"annotations":[104952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005978"},{"annotations":[99365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005980"},{"annotations":[110502,114550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005977"},{"annotations":[94059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019660"},{"annotations":[84574,94784,110677,110678,94785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019655"},{"annotations":[93667,94667,96345,104702,86146,105821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061723"},{"annotations":[92622],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043490"},{"annotations":[112178],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042775"},{"annotations":[112896,115091,115139,110291,104337,115112,112179,84269,87998,111525,110720],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0006123"},{"annotations":[108916],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0006120"},{"annotations":[109259,84882,112833,85249],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0006121"},{"annotations":[100141,86040,112180,100545,115117,109465,113752,111163,114223,104013],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0006122"},{"annotations":[86987,77669],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045719"},{"annotations":[92784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006119"},{"annotations":[92639],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:2001172"},{"annotations":[89331,103864,104840,115132,97875,85195,115127,88904,89926,101050,99099,111912,115121,99718,99747,90898,103954],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042776"},{"annotations":[105743,107943,90433,93684],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903715"},{"annotations":[108130,112632,84883,85983,69721,90516,85250,109261,111813,95523,102782,111035,109515,112835,106181],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006099"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways by which a cell derives energy from organic compounds; results in the oxidation of the compounds from which energy is released.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generation of precursor metabolites and energy","termid":"GO:0006091"}],"gene_count":92,"genes_by_uniquename":{"SJAG_00080":null,"SJAG_00115":null,"SJAG_00132":null,"SJAG_00133":null,"SJAG_00240":null,"SJAG_00260":null,"SJAG_00438":null,"SJAG_00522":null,"SJAG_00542":null,"SJAG_00570":null,"SJAG_00601":null,"SJAG_00698":null,"SJAG_00755":null,"SJAG_00836":null,"SJAG_00866":null,"SJAG_00915":null,"SJAG_00963":null,"SJAG_00976":null,"SJAG_00985":null,"SJAG_01062":null,"SJAG_01077":null,"SJAG_01080":null,"SJAG_01089":null,"SJAG_01190":null,"SJAG_01209":null,"SJAG_01319":null,"SJAG_01355":null,"SJAG_01376":null,"SJAG_01402":null,"SJAG_01414":null,"SJAG_01490":null,"SJAG_01524":null,"SJAG_01539":null,"SJAG_01561":null,"SJAG_01630":null,"SJAG_01671":null,"SJAG_01753":null,"SJAG_01763":null,"SJAG_01783":null,"SJAG_01895":null,"SJAG_01922":null,"SJAG_01970":null,"SJAG_02006":null,"SJAG_02076":null,"SJAG_02105":null,"SJAG_02158":null,"SJAG_02178":null,"SJAG_02398":null,"SJAG_02433":null,"SJAG_02464":null,"SJAG_02504":null,"SJAG_02564":null,"SJAG_02592":null,"SJAG_02598":null,"SJAG_02646":null,"SJAG_02744":null,"SJAG_03064":null,"SJAG_03114":null,"SJAG_03163":null,"SJAG_03290":null,"SJAG_03370":null,"SJAG_03442":null,"SJAG_03490":null,"SJAG_03588":null,"SJAG_03743":null,"SJAG_03813":null,"SJAG_03822":null,"SJAG_03851":null,"SJAG_03920":null,"SJAG_03925":null,"SJAG_03964":null,"SJAG_04067":null,"SJAG_04122":null,"SJAG_04152":null,"SJAG_04495":null,"SJAG_04843":null,"SJAG_04963":null,"SJAG_05006":null,"SJAG_05204":null,"SJAG_05629":null,"SJAG_06309":null,"SJAG_06382":null,"SJAG_07003":null,"SJAG_07006":null,"SJAG_07007":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT09":null,"SJAG_MIT13":null,"SJAG_MIT15":null,"SJAG_MIT20":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"energy derivation by oxidation of organic compounds","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"chemoorganotrophy","type":"exact"}],"termid":"GO:0015980","terms_by_termid":{"GO:0005977":null,"GO:0005978":null,"GO:0005980":null,"GO:0006099":null,"GO:0006112":null,"GO:0006119":null,"GO:0006120":null,"GO:0006121":null,"GO:0006122":null,"GO:0006123":null,"GO:0009060":null,"GO:0019655":null,"GO:0019660":null,"GO:0042775":null,"GO:0042776":null,"GO:0043490":null,"GO:0045719":null,"GO:0061723":null,"GO:1903715":null,"GO:2001172":null}}


id: GO:0019372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which an unsaturated fatty acid (such as arachidonic acid or linolenic acid) is converted to other compounds, and in which the first step is hydroperoxide formation catalyzed by lipoxygenase.","definition_xrefs":["PMID:17163881","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid metabolic process","termid":"GO:0006631"},{"relation_name":"is_a","term_name":"icosanoid metabolic process","termid":"GO:0006690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"lipoxygenase pathway","termid":"GO:0019372"}


id: FYPO:0000171
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which late endosome to vacuole transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vesicle-mediated transport during vegetative growth","termid":"FYPO:0000213"},{"relation_name":"is_a","term_name":"abnormal vacuolar transport during vegetative growth","termid":"FYPO:0000597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal late endosome to vacuole transport","synonyms":[{"name":"abnormal late endosome to vacuole protein transport","type":"narrow"},{"name":"abnormal late endosome to vacuole transport during mitotic cell cycle","type":"related"},{"name":"abnormal late endosome to vacuole transport during vegetative growth","type":"exact"}],"termid":"FYPO:0000171"}


id: PBO:0082856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core component of transport protein particle (TRAPP) complexes I-III; TRAPP complexes are related multimeric guanine nucleotide-exchange factor for the GTPase Ypt1p, regulating ER-Golgi traffic (TRAPPI), intra-Golgi traffic (TRAPPII), endosome-Golgi traffic (TRAPPII and III) and autophagy (TRAPPIII); human homolog is TRAPPC4","termid":"PBO:0082856"}


id: PBO:0078787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 11-1","termid":"PBO:0078787"}


id: GO:0022849
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a channel that opens when glutamate has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate-gated receptor activity","termid":"GO:0004970"},{"relation_name":"is_a","term_name":"ligand-gated calcium channel activity","termid":"GO:0099604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"glutamate-gated calcium ion channel activity","termid":"GO:0022849"}


id: PBO:0054802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2215","termid":"PBO:0054802"}


id: PBO:0078288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 21-1","termid":"PBO:0078288"}


id: PBO:0079615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 K","termid":"PBO:0079615"}


id: GO:0098870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The propagation of an action potential along the plane of an excitable membrane. Action potentials typically propagate once triggered because the depolarization of adjacent membrane regions due to an action potential crosses the firing threshold.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"action potential","termid":"GO:0001508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"action potential propagation","termid":"GO:0098870"}


id: GO:0051894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of focal adhesion assembly, the establishment and maturation of focal adhesions.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-matrix adhesion","termid":"GO:0001954"},{"relation_name":"is_a","term_name":"regulation of focal adhesion assembly","termid":"GO:0051893"},{"relation_name":"is_a","term_name":"positive regulation of cell-substrate junction organization","termid":"GO:0150117"},{"relation_name":"is_a","term_name":"positive regulation of cell junction assembly","termid":"GO:1901890"},{"relation_name":"positively_regulates","term_name":"focal adhesion assembly","termid":"GO:0048041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of focal adhesion assembly","synonyms":[{"name":"activation of focal adhesion formation","type":"narrow"},{"name":"stimulation of focal adhesion formation","type":"narrow"},{"name":"up regulation of focal adhesion formation","type":"exact"},{"name":"up-regulation of focal adhesion formation","type":"exact"},{"name":"upregulation of focal adhesion formation","type":"exact"}],"termid":"GO:0051894"}


id: GO:0002391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis or release of platelet activating factor following a stimulus as part of an inflammatory response, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator involved in inflammatory response","termid":"GO:0002532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"platelet activating factor production involved in inflammatory response","secondary_identifiers":["GO:0002392","GO:0002390","GO:0002535"],"synonyms":[{"name":"platelet activating factor production","type":"related"},{"name":"platelet activating factor production involved in acute inflammatory response","type":"narrow"},{"name":"platelet activating factor secretion","type":"narrow"},{"name":"platelet activating factor secretion involved in acute inflammatory response","type":"narrow"},{"name":"platelet activating factor secretion involved in inflammatory response","type":"narrow"}],"termid":"GO:0002391"}


id: PBO:0049256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin and cysteine rich domain containing 2","termid":"PBO:0049256"}


id: PBO:0049427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 4","termid":"PBO:0049427"}


id: SO:0001317
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Queuosine is a modified 7-deazoguanosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"seven_deazaguanosine","termid":"SO:0001316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"queuosine","secondary_identifiers":["RNAMOD:043","http://en.wikipedia.org/wiki/Queuosine"],"synonyms":[{"name":" Q","type":"exact"}],"termid":"SO:0001317"}


id: PBO:0004334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L10a","termid":"PBO:0004334"}


id: FYPO:0006754
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which promoter-enhancer looping occurs to a lower extent than normal when the cell is subject to glucose starvation. Promoter-enhancer looping is mediated by interactions between proteins bound to DNA at promoters and at enhancers, or by a single protein binding at both sites.","definition_xrefs":["PMID:28934464","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased promoter-enhancer looping during glucose starvation","synonyms":[{"name":"decreased promoter-enhancer looping during glucose depletion","type":"exact"},{"name":"decreased promoter-enhancer looping during glucose deprivation","type":"exact"}],"termid":"FYPO:0006754"}


id: PBO:0086174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for the maintenance of bud site selection; localizes; localization to the bud neck and previous sites of cell division (bud scars; cytokinesis remnants (CRMs)) is interdependent with Rax2p; required with Rax1p to anchor both Nba1p and Nis1p to CRMs where a Cdc42p inhibitory zone is established preventing repolarization of cells at previous division sites; RAX2 mRNA stability is regulated by Mpt5p; predicted type I membrane-spanning protein; N-glycosylated","termid":"PBO:0086174"}


id: GO:0006044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving N-acetylglucosamine. The D isomer is a common structural unit of glycoproteins in plants, bacteria and animals; it is often the terminal sugar of an oligosaccharide group of a glycoprotein.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosamine-containing compound metabolic process","termid":"GO:1901071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-acetylglucosamine metabolic process","synonyms":[{"name":"N-acetylglucosamine metabolism","type":"exact"}],"termid":"GO:0006044"}


id: GO:0052653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3',5'-cyclic diguanylic acid, a cyclic purine dinucleotide in which the base groups are guanine.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"cyclic nucleotide biosynthetic process","termid":"GO:0009190"},{"relation_name":"is_a","term_name":"cyclic purine nucleotide metabolic process","termid":"GO:0052652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"3',5'-cyclic diguanylic acid metabolic process","synonyms":[{"name":"3',5'-cyclic diguanylic acid metabolism","type":"exact"},{"name":"cdiGMP metabolic process","type":"exact"},{"name":"cdiGMP metabolism","type":"exact"},{"name":"cyclic diguanylate metabolic process","type":"exact"},{"name":"cyclic diguanylate metabolism","type":"exact"}],"termid":"GO:0052653"}


id: FYPO:0003042
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to nuclear exosome foci does not occur. Nuclear exosome foci, also called Mmi1 nuclear foci, are small structures that form within the nucleus, and contain proteins involved in degrading meiosis-specific RNAs during the mitotic cell cycle, such as Mmi1, Iss10, and Red1.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus during vegetative growth","termid":"FYPO:0001424"},{"relation_name":"is_a","term_name":"abnormal protein localization to nuclear exosome focus","termid":"FYPO:0002963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to nuclear exosome focus","synonyms":[{"name":"abolished protein localisation to nuclear exosome focus","type":"exact"},{"name":"abolished protein localization to Mmi1 focus","type":"exact"},{"name":"abolished protein localization to Mmi1 nuclear focus","type":"exact"},{"name":"abolished protein localization to nuclear exosome focus during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to nuclear exosome focus during vegetative growth","type":"exact"},{"name":"protein localization to nuclear exosome focus abolished","type":"exact"}],"termid":"FYPO:0003042"}


id: FYPO:0002582
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature mitochondrial transfer RNA (tRNA) measured in a cell is normal (i.e. indistinguishable from wild type). Total tRNA or a specific tRNA may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mature tRNA level","termid":"FYPO:0002580"},{"relation_name":"is_a","term_name":"normal mitochondrial RNA level","termid":"FYPO:0004960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal mature mitochondrial tRNA level","synonyms":[{"name":"normal mature mitochondrial tRNA accumulation","type":"related"},{"name":"normal mature mitochondrial tRNA level during mitotic cell cycle","type":"related"},{"name":"normal mature mitochondrial tRNA level during vegetative growth","type":"exact"},{"name":"normal mature mitochondrial tRNA transcript level","type":"exact"},{"name":"normal mature mitochondrial transfer RNA level","type":"exact"},{"name":"normal mitochondrial tRNA level","type":"broad"}],"termid":"FYPO:0002582"}


id: FYPO:0004123
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a glutathione disulfide oxidoreductase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"normal glutathione disulfide oxidoreductase activity","termid":"FYPO:0004123"}


id: GO:0060508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features of a mature basal cell found in the lung. Differentiation includes the processes involved in commitment of a cell to a specific fate. A basal cell is an epithelial stem cell.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung cell differentiation","termid":"GO:0060479"},{"relation_name":"part_of","term_name":"lung epithelium development","termid":"GO:0060428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung basal cell differentiation","synonyms":[{"name":"pulmonary basal cell differentiation","type":"broad"}],"termid":"GO:0060508"}


id: PR:O74549
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A NEDD8-conjugating enzyme Ubc12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR24067:SF17","OMA:SCHPO04749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8-conjugating enzyme ubc12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.10c","secondary_identifiers":["UniProtKB:O74549"],"synonyms":[{"name":"RUB1-conjugating enzyme (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RUB1-protein ligase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-UBE2M","type":"exact"},{"name":"ubiquitin carrier protein 12 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74549"}


id: GO:0071692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported from one specific location in the extracellular region to another, or maintained in a specific extracellular location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to extracellular region","synonyms":[{"name":"protein localisation in extracellular region","type":"exact"},{"name":"protein localization in extracellular region","type":"exact"}],"termid":"GO:0071692"}


id: GO:1901950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement a dense core granule within a cell.","definition_xrefs":["PMID:23358451","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic transport","termid":"GO:0016482"},{"relation_name":"is_a","term_name":"dense core granule localization","termid":"GO:0032253"},{"relation_name":"is_a","term_name":"establishment of vesicle localization","termid":"GO:0051650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"dense core granule transport","synonyms":[{"name":"dense core vesicle transport","type":"exact"}],"termid":"GO:1901950"}


id: PBO:0049571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B histone pseudogene 8","termid":"PBO:0049571"}


id: PBO:0080030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 16, pseudogene","termid":"PBO:0080030"}


id: GO:0016572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histones by addition of phosphate groups.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete histone phosphorylation (obsolete GO:0016572)","termid":"GO:0016572"}


id: GO:0039530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of dsRNA from another organism to the cytoplasmic pattern recognition receptor (PRR) MDA-5 (also known as IFIH1). MDA-5 detects RNA synthesized during viral replication or shed by non-viral pathogens, and triggers a signaling pathway to protect the host against infection, for example by inducing the expression of cytokines.","definition_xrefs":["GOC:bf","PMID:19620789","PMID:33087405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0002753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"MDA-5 signaling pathway","synonyms":[{"name":"IFIH1 signaling pathway","type":"exact"},{"name":"MDA-5 signalling pathway","type":"exact"},{"name":"MDA5 signaling pathway","type":"narrow"},{"name":"melanoma differentiation-associated gene 5 signaling pathway","type":"exact"}],"termid":"GO:0039530"}


id: GO:1905558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitotic nuclear envelope disassembly.","definition_xrefs":["PMID:18765790","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of mitotic nuclear envelope disassembly","termid":"GO:1905557"},{"relation_name":"negatively_regulates","term_name":"mitotic nuclear membrane disassembly","termid":"GO:0007077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitotic nuclear envelope disassembly","synonyms":[{"name":"down regulation of mitotic nuclear envelope breakdown","type":"exact"},{"name":"down regulation of mitotic nuclear envelope catabolism","type":"exact"},{"name":"down regulation of mitotic nuclear envelope degradation","type":"exact"},{"name":"down regulation of mitotic nuclear envelope disassembly","type":"exact"},{"name":"down-regulation of mitotic nuclear envelope breakdown","type":"exact"},{"name":"down-regulation of mitotic nuclear envelope catabolism","type":"exact"},{"name":"down-regulation of mitotic nuclear envelope degradation","type":"exact"},{"name":"down-regulation of mitotic nuclear envelope disassembly","type":"exact"},{"name":"downregulation of mitotic nuclear envelope breakdown","type":"exact"},{"name":"downregulation of mitotic nuclear envelope catabolism","type":"exact"},{"name":"downregulation of mitotic nuclear envelope degradation","type":"exact"},{"name":"downregulation of mitotic nuclear envelope disassembly","type":"exact"},{"name":"inhibition of mitotic nuclear envelope breakdown","type":"narrow"},{"name":"inhibition of mitotic nuclear envelope catabolism","type":"narrow"},{"name":"inhibition of mitotic nuclear envelope degradation","type":"narrow"},{"name":"inhibition of mitotic nuclear envelope disassembly","type":"narrow"},{"name":"negative regulation of mitotic nuclear envelope breakdown","type":"exact"},{"name":"negative regulation of mitotic nuclear envelope catabolism","type":"exact"},{"name":"negative regulation of mitotic nuclear envelope degradation","type":"exact"}],"termid":"GO:1905558"}


id: PBO:0057053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 138-2","termid":"PBO:0057053"}


id: PBO:0048133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frataxin pseudogene 1","termid":"PBO:0048133"}


id: GO:1904138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of convergent extension involved in notochord morphogenesis.","definition_xrefs":["GOC:TermGenie","GOC:dph","GO_REF:0000058","PMID:24892953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of convergent extension involved in gastrulation","termid":"GO:1904105"},{"relation_name":"is_a","term_name":"regulation of convergent extension involved in notochord morphogenesis","termid":"GO:1904136"},{"relation_name":"positively_regulates","term_name":"convergent extension involved in notochord morphogenesis","termid":"GO:1904126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of convergent extension involved in notochord morphogenesis","synonyms":[{"name":"activation of convergent extension involved in notochord morphogenesis","type":"narrow"},{"name":"up regulation of convergent extension involved in notochord morphogenesis","type":"exact"},{"name":"up-regulation of convergent extension involved in notochord morphogenesis","type":"exact"},{"name":"upregulation of convergent extension involved in notochord morphogenesis","type":"exact"}],"termid":"GO:1904138"}


id: PR:Q9P6M2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC688.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6M2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C688.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC688.03c","synonyms":[{"name":"Spom972h-SPAC688.03c","type":"exact"}],"termid":"PR:Q9P6M2"}


id: GO:0015433
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptide antigen(in) + ATP = peptide antigen(out) + ADP + phosphate.","definition_xrefs":["TC:3.A.1.209.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type peptide transporter activity","termid":"GO:0015440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ABC-type peptide antigen transporter activity","secondary_identifiers":["Reactome:R-HSA-1236949","EC:7.4.2.14","MetaCyc:3.6.3.43-RXN","Reactome:R-HSA-983144","RHEA:65972"],"synonyms":[{"name":"ATP-dependent peptide antigen transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled peptide antigen transmembrane transporter activity","type":"related"},{"name":"major histocompatibility peptide transporter activity","type":"exact"},{"name":"peptide antigen ABC transporter","type":"narrow"},{"name":"peptide antigen transporter activity","type":"broad"},{"name":"peptide antigen-transporting ATPase activity","type":"exact"}],"termid":"GO:0015433"}


id: PBO:0053378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 304","termid":"PBO:0053378"}


id: GO:0042695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The beginning of development of the breasts in the female.","definition_xrefs":["GOC:curators","PMID:19117864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"development of secondary female sexual characteristics","termid":"GO:0046543"},{"relation_name":"part_of","term_name":"mammary gland development","termid":"GO:0030879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thelarche","secondary_identifiers":["Wikipedia:Thelarche"],"termid":"GO:0042695"}


id: GO:0016024
data:
  {"annotated_genes":["SJAG_01233","SJAG_03563","SJAG_00168","SJAG_00426"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99067,102252,109083,110740,115565],"is_not":false,"summary":null,"term":"GO:0016024"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of CDP-diacylglycerol, CDP-1,2-diacylglycerol, a substance composed of diacylglycerol in glycosidic linkage with cytidine diphosphate.","definition_xrefs":["PMID:24533860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDP-diacylglycerol metabolic process","termid":"GO:0046341"},{"relation_name":"is_a","term_name":"glycerophospholipid biosynthetic process","termid":"GO:0046474"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00168":null,"SJAG_00426":null,"SJAG_01233":null,"SJAG_03563":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"CDP-diacylglycerol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25318672":null},"synonyms":[{"name":"CDP-diacylglycerol anabolism","type":"exact"},{"name":"CDP-diacylglycerol biosynthesis","type":"exact"},{"name":"CDP-diacylglycerol formation","type":"exact"},{"name":"CDP-diacylglycerol synthesis","type":"exact"}],"termid":"GO:0016024","terms_by_termid":{"GO:0016024":null}}


id: PR:P04909
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2A-alpha that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PMID:15226425","PMID:21516229","PMID:19965387","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A-alpha","termid":"PR:000027558"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"core histone (Schizosaccharomyces pombe)","termid":"PR:000041293"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A-alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.08c","secondary_identifiers":["PR:000027559","UniProtKB:P04909"],"synonyms":[{"name":"SPCC622.08C","type":"related"},{"name":"Spom972h-hta1","type":"exact"}],"termid":"PR:P04909"}


id: MOD:01251
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-[3-(carboxamidomethylthio)propanoyl]lysine.","definition_xrefs":["Unimod:293#K","PubMed:15121203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-(carboxamidomethylthio)propanoylated residue","termid":"MOD:00612"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-[3-(carboxamidomethylthio)propanoyl]lysine","synonyms":[{"name":"3-(carbamidomethylthio)propanoyl","type":"related"},{"name":"CAMthiopropanoyl","type":"related"}],"termid":"MOD:01251"}


id: GO:0004123
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cystathionine + H2O = 2-oxobutanoate + L-cysteine + NH4+.","definition_xrefs":["RHEA:14005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"cystathionine gamma-lyase activity","secondary_identifiers":["KEGG_REACTION:R01001","GO:0016225","EC:4.4.1.1","MetaCyc:RXN-15130","Reactome:R-HSA-1614583"],"synonyms":[{"name":"L-cystathionine cysteine-lyase (deaminating)","type":"broad"},{"name":"L-cystathionine cysteine-lyase (deaminating; 2-oxobutanoate-forming)","type":"related"},{"name":"gamma-cystathionase activity","type":"broad"},{"name":"homoserine deaminase activity","type":"related"},{"name":"homoserine deaminase-cystathionase activity","type":"related"},{"name":"homoserine dehydratase activity","type":"related"}],"termid":"GO:0004123"}


id: PBO:0045007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodothyronine deiodinase 2","termid":"PBO:0045007"}


id: SO:0001372
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"3_methyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_methyluridine","secondary_identifiers":["RNAMOD:085"],"synonyms":[{"name":"3-methyluridine","type":"exact"},{"name":"m3U","type":"exact"},{"name":"three methyluridine","type":"exact"}],"termid":"SO:0001372"}


id: PBO:0067072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 101, pseudogene","termid":"PBO:0067072"}


id: GO:1901482
data:
  {"annotated_genes":["SJAG_03256","SJAG_04725"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98866,99902],"is_not":false,"summary":null,"term":"GO:1901482"}]},"cv_name":"biological_process","definition":"A L-lysine import into the vacuole that is involved in cellular response to nitrogen starvation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysine transmembrane import into vacuole","termid":"GO:0090517"},{"relation_name":"part_of","term_name":"cellular response to nitrogen starvation","termid":"GO:0006995"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03256":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"L-lysine import into vacuole involved in cellular response to nitrogen starvation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1901482","terms_by_termid":{"GO:1901482":null}}


id: GO:0031967
data:
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id: SO:1000018
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id: PBO:0065248
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id: GO:1990383
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id: PBO:0064785
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id: PATO:0000144
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id: GO:0061236
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id: PBO:0026869
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id: GO:0060255
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