# terms

id: PBO:0004911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting receptor for vacuolar proteins, Vps10","termid":"PBO:0004911"}


id: PBO:0029400
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_nucleoplasm","termid":"PBO:0029400"}


id: SO:0000611
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pyrimidine rich sequence near the 3' end of an intron to which the 5'end becomes covalently bound during nuclear splicing. The resulting structure resembles a lariat.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal_intron_region","termid":"SO:0000841"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branch_site","synonyms":[{"name":"branch point","type":"exact"},{"name":"branch site","type":"exact"},{"name":"branch_point","type":"exact"}],"termid":"SO:0000611"}


id: GO:1900089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of inositol biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:22307851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inositol biosynthetic process","termid":"GO:1900088"},{"relation_name":"is_a","term_name":"negative regulation of alcohol biosynthetic process","termid":"GO:1902931"},{"relation_name":"negatively_regulates","term_name":"inositol biosynthetic process","termid":"GO:0006021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of inositol biosynthetic process","synonyms":[{"name":"down regulation of inositol anabolism","type":"exact"},{"name":"down regulation of inositol biosynthesis","type":"exact"},{"name":"down regulation of inositol biosynthetic process","type":"exact"},{"name":"down regulation of inositol formation","type":"exact"},{"name":"down regulation of inositol synthesis","type":"exact"},{"name":"down regulation of myo-inositol biosynthesis","type":"narrow"},{"name":"down regulation of myo-inositol biosynthetic process","type":"narrow"},{"name":"down regulation of vitamin Bh biosynthesis","type":"exact"},{"name":"down regulation of vitamin Bh biosynthetic process","type":"exact"},{"name":"down-regulation of inositol anabolism","type":"exact"},{"name":"down-regulation of inositol biosynthesis","type":"exact"},{"name":"down-regulation of inositol biosynthetic process","type":"exact"},{"name":"down-regulation of inositol formation","type":"exact"},{"name":"down-regulation of inositol synthesis","type":"exact"},{"name":"down-regulation of myo-inositol biosynthesis","type":"narrow"},{"name":"down-regulation of myo-inositol biosynthetic process","type":"narrow"},{"name":"down-regulation of vitamin Bh biosynthesis","type":"exact"},{"name":"down-regulation of vitamin Bh biosynthetic process","type":"exact"},{"name":"downregulation of inositol anabolism","type":"exact"},{"name":"downregulation of inositol biosynthesis","type":"exact"},{"name":"downregulation of inositol biosynthetic process","type":"exact"},{"name":"downregulation of inositol formation","type":"exact"},{"name":"downregulation of inositol synthesis","type":"exact"},{"name":"downregulation of myo-inositol biosynthesis","type":"narrow"},{"name":"downregulation of myo-inositol biosynthetic process","type":"narrow"},{"name":"downregulation of vitamin Bh biosynthesis","type":"exact"},{"name":"downregulation of vitamin Bh biosynthetic process","type":"exact"},{"name":"inhibition of inositol anabolism","type":"exact"},{"name":"inhibition of inositol biosynthesis","type":"exact"},{"name":"inhibition of inositol biosynthetic process","type":"narrow"},{"name":"inhibition of inositol formation","type":"exact"},{"name":"inhibition of inositol synthesis","type":"exact"},{"name":"inhibition of myo-inositol biosynthesis","type":"narrow"},{"name":"inhibition of myo-inositol biosynthetic process","type":"narrow"},{"name":"inhibition of vitamin Bh biosynthesis","type":"exact"},{"name":"inhibition of vitamin Bh biosynthetic process","type":"exact"},{"name":"negative regulation of inositol anabolism","type":"exact"},{"name":"negative regulation of inositol biosynthesis","type":"exact"},{"name":"negative regulation of inositol formation","type":"exact"},{"name":"negative regulation of inositol synthesis","type":"exact"},{"name":"negative regulation of myo-inositol biosynthesis","type":"narrow"},{"name":"negative regulation of myo-inositol biosynthetic process","type":"narrow"},{"name":"negative regulation of vitamin Bh biosynthesis","type":"exact"},{"name":"negative regulation of vitamin Bh biosynthetic process","type":"exact"}],"termid":"GO:1900089"}


id: PBO:0074410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 12 pseudogene 1","termid":"PBO:0074410"}


id: PBO:0071935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 12","termid":"PBO:0071935"}


id: GO:0018832
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the elimination of HCl from a chloropropanol, yielding an epoxypropane.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete halohydrin hydrogen-halide-lyase B activity (obsolete GO:0018832)","termid":"GO:0018832"}


id: PBO:0041157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 pseudogene 12","termid":"PBO:0041157"}


id: GO:0046168
data:
  {"annotated_genes":["SJAG_01012","SJAG_00409"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90038,102545],"is_not":false,"summary":null,"term":"GO:0046168"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycerol-3-phosphate, a phosphoric monoester of glycerol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol-3-phosphate metabolic process","termid":"GO:0006072"},{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_01012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycerol-3-phosphate catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glycerol-3-phosphate breakdown","type":"exact"},{"name":"glycerol-3-phosphate catabolism","type":"exact"},{"name":"glycerol-3-phosphate degradation","type":"exact"}],"termid":"GO:0046168","terms_by_termid":{"GO:0046168":null}}


id: PBO:0027031
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nuclear_envelope","termid":"PBO:0027031"}


id: PR:Q10113
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mal3 gene.","definition_xrefs":["UniProtKB:Q10113","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule integrity protein mal3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.15","synonyms":[{"name":"Spom972h-mal3","type":"exact"}],"termid":"PR:Q10113"}


id: GO:0022031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of an astrocyte cell through the telencephalon.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telencephalon glial cell migration","termid":"GO:0022030"},{"relation_name":"is_a","term_name":"astrocyte cell migration","termid":"GO:0043615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"telencephalon astrocyte cell migration","termid":"GO:0022031"}


id: PBO:0078557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 45","termid":"PBO:0078557"}


id: PBO:0073944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 19 member 2","termid":"PBO:0073944"}


id: GO:1901672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of systemic acquired resistance.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to biotic stimulus","termid":"GO:0002833"},{"relation_name":"is_a","term_name":"regulation of systemic acquired resistance","termid":"GO:0010112"},{"relation_name":"is_a","term_name":"positive regulation of defense response","termid":"GO:0031349"},{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"positively_regulates","term_name":"systemic acquired resistance","termid":"GO:0009627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of systemic acquired resistance","synonyms":[{"name":"activation of salicylic acid-dependent systemic resistance","type":"exact"},{"name":"activation of systemic acquired resistance","type":"narrow"},{"name":"positive regulation of salicylic acid-dependent systemic resistance","type":"exact"},{"name":"up regulation of salicylic acid-dependent systemic resistance","type":"exact"},{"name":"up regulation of systemic acquired resistance","type":"exact"},{"name":"up-regulation of salicylic acid-dependent systemic resistance","type":"exact"},{"name":"up-regulation of systemic acquired resistance","type":"exact"},{"name":"upregulation of salicylic acid-dependent systemic resistance","type":"exact"},{"name":"upregulation of systemic acquired resistance","type":"exact"}],"termid":"GO:1901672"}


id: GO:0098548
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the Golgi membrane that faces the cytoplasm.","definition_xrefs":["GOC:ab","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of membrane","termid":"GO:0098562"},{"relation_name":"part_of","term_name":"Golgi membrane","termid":"GO:0000139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005794"],"is_obsolete":false,"name":"cytoplasmic side of Golgi membrane","termid":"GO:0098548"}


id: FYPO:0001203
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype that reflects increased occurrence of coflocculation. In coflocculation, yeast cells coaggregate with cells of another species, usually bacteria.","definition_xrefs":["PMID:11472912","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased flocculation","termid":"FYPO:0000155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"coflocculating cells","synonyms":[{"name":"co-flocculating cells","type":"exact"},{"name":"increased coflocculation","type":"exact"}],"termid":"FYPO:0001203"}


id: GO:0061758
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2-hydroxyglutarate + acceptor -> 2-oxoglutarate + reduced acceptor.","definition_xrefs":["RHEA:21253","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-hydroxyglutarate dehydrogenase activity","termid":"GO:0047545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2-hydroxyglutarate dehydrogenase activity, forward reaction","synonyms":[{"name":"alpha-ketoglutarate reductase activity, reverse reaction","type":"exact"}],"termid":"GO:0061758"}


id: GO:0140763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A programmed DNA elimination mechanism in which specific sequences, namely, internal eliminated sequences (IES) and breakage eliminated sequences (BES) are removed from the genome. This process is known to occur in ciliates.","definition_xrefs":["PMID:18708581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed DNA elimination","termid":"GO:0031049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"programmed DNA elimination by elimination of internal DNA segments","termid":"GO:0140763"}


id: PBO:0060137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melatonin receptor 1A","termid":"PBO:0060137"}


id: SO:0002381
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A long non-coding RNA which is produced using the promoter of a protein-coding gene but with transcription occurring in the opposite direction.","definition_xrefs":["PMID:30175284","PMID:34956340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lncRNA","termid":"SO:0001877"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bidirectional_promoter_lncRNA","synonyms":[{"name":"bidirectional lncRNA","type":"exact"},{"name":"bidirectional promoter lncRNA","type":"exact"},{"name":"bidirectional promoter long non-coding RNA","type":"exact"},{"name":"bidirectional_lncRNA","type":"exact"},{"name":"bidirectional_promoter_long_non-coding_RNA","type":"exact"}],"termid":"SO:0002381"}


id: PBO:0027136
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-circularized_chromosome_during_mitotic_G2_phase","termid":"PBO:0027136"}


id: GO:0048460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the flower. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"flower morphogenesis","termid":"GO:0048439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flower formation","secondary_identifiers":["GO:0048410"],"termid":"GO:0048460"}


id: SO:0001615
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant with in the CDS that causes out of frame elongation of the resulting polypeptide sequence at the N terminus.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated_polypeptide_N_terminal","termid":"SO:0001611"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongated_out_of_frame_polypeptide_N_terminal","synonyms":[{"name":"elongated out of frame N terminal","type":"exact"}],"termid":"SO:0001615"}


id: PBO:0011521
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactic acidosis, hyperglycinemia","termid":"PBO:0011521"}


id: GO:0003374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of creating dynamin protein family polymers, compounds composed of a large number of dynamin family monomers around a lipid tube of a dividing mitochondrion. Dynamin polymers form around lipid tubes and contribute to membrane fission.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete dynamin family protein polymerization involved in mitochondrial fission (obsolete GO:0003374)","termid":"GO:0003374"}


id: PBO:0050776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine (serotonin) oxygenase regulator","termid":"PBO:0050776"}


id: GO:0048555
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The nucleus of the generative cell, a cell contained within the pollen grain that will divide to produce two haploid sperm cells.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"generative cell nucleus","synonyms":[{"name":"male germ cell nucleus","type":"broad"},{"name":"sperm cell nucleus","type":"broad"}],"termid":"GO:0048555"}


id: GO:2000031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of salicylic acid mediated signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"salicylic acid mediated signaling pathway","termid":"GO:0009863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of salicylic acid mediated signaling pathway","synonyms":[{"name":"regulation of salicylic acid mediated signalling pathway","type":"exact"}],"termid":"GO:2000031"}


id: PBO:0049205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor kainate type subunit 5","termid":"PBO:0049205"}


id: PR:Q9P7X5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk32 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7X5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase domain-containing protein ppk32 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.10","synonyms":[{"name":"Spom972h-ppk32","type":"exact"}],"termid":"PR:Q9P7X5"}


id: GO:0160028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of a pyroptotic inflammatory response.","definition_xrefs":["PMID:34637033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of inflammatory response","termid":"GO:0050728"},{"relation_name":"negatively_regulates","term_name":"pyroptotic inflammatory response","termid":"GO:0070269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pyroptotic inflammatory response","synonyms":[{"name":"negative regulation of pyroptosis","type":"broad"}],"termid":"GO:0160028"}


id: GO:0004727
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: prenylated-protein tyrosine phosphate + H2O = prenylated-protein tyrosine + phosphate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete prenylated protein tyrosine phosphatase activity (obsolete GO:0004727)","termid":"GO:0004727"}


id: PBO:0067161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 214, pseudogene","termid":"PBO:0067161"}


id: GO:0006419
data:
  {"annotated_genes":["SJAG_01797"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990762"},{"annotations":[89776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070143"}]},"cv_name":"biological_process","definition":"The process of coupling alanine to alanyl-tRNA, catalyzed by alanyl-tRNA synthetase. The alanyl-tRNA synthetase is a class-II synthetases. The activated amino acid is transferred to the 3'-OH group of an alanine accetping tRNA.","definition_xrefs":["GOC:mcc","ISBN:0716730510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01797":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0006520","GO:0010467"],"is_obsolete":false,"name":"alanyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006419","terms_by_termid":{"GO:0070143":null,"GO:1990762":null}}


id: PR:O74898
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A diphthine methyl ester synthase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04943","PANTHER:PTHR10882:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthine methyl ester synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.14","secondary_identifiers":["UniProtKB:O74898"],"synonyms":[{"name":"Spom972h-DPH5","type":"exact"},{"name":"diphthamide biosynthesis methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74898"}


id: PBO:0059633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule crosslinking factor 1","termid":"PBO:0059633"}


id: GO:0005650
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete importin, alpha-subunit transport factor (obsolete GO:0005650)","synonyms":[{"name":"CAS","type":"related"},{"name":"importin, alpha-subunit transport factor","type":"exact"}],"termid":"GO:0005650"}


id: GO:0140841
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + RNA polymerase II large subunit CTD heptapeptide repeat (YSPTSPS) = UDP + RNA polymerase II large subunit CTD heptapeptide repeat 3-O-(N-acetyl-D-glucosaminyl)-L-serine.","definition_xrefs":["PMID:22605332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein O-acetylglucosaminyltransferase activity","termid":"GO:0097363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"RNA polymerase II C-terminal domain O-GlcNAc transferase activity","termid":"GO:0140841"}


id: GO:0140955
data:
  {"annotated_genes":["SJAG_02873"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91545],"is_not":false,"summary":null,"term":"GO:0140955"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl36-[histone H3] + 3 S-adenosyl-L-methionine = 3 H+ + N6,N6,N6-trimethyl-L-lysyl36-[histone H3] + 3 S-adenosyl-L-homocysteine. This reaction is the successive addition of three methyl groups to the lysine residue at position 36 of histone H3, producing histone H3K36me3.","definition_xrefs":["RHEA:60324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K36 methyltransferase activity","termid":"GO:0046975"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02873":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016741","GO:0016740","GO:0140096","GO:0008276"],"is_obsolete":false,"name":"histone H3K36 trimethyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.1.1.359"],"synonyms":[{"name":"histone H3-K36 trimethylation","type":"broad"},{"name":"histone H3K36 mono/di/trimethylase activity","type":"exact"},{"name":"histone H3K36 trimethylase activity","type":"exact"},{"name":"histone H3K36 trimethylation","type":"broad"},{"name":"histone lysine N-trimethyltransferase activity (H3-K36 specific)","type":"exact"}],"termid":"GO:0140955","terms_by_termid":{"GO:0140955":null}}


id: GO:0044879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A signaling process that contributes to a mitotic cell cycle checkpoint which delays mitotic onset in response to perturbations that affect cell shape via the actin cytoskeleton, septin organization, small cell size, and/or the extent of membrane growth.","definition_xrefs":["GOC:jl","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle checkpoint signaling","termid":"GO:0007093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"mitotic morphogenesis checkpoint signaling","secondary_identifiers":["GO:1903822"],"synonyms":[{"name":"morphogenesis checkpoint","type":"exact"},{"name":"septin checkpoint","type":"exact"},{"name":"signal transduction involved in morphogenesis checkpoint","type":"exact"},{"name":"signal transduction involved in septin checkpoint","type":"exact"},{"name":"signaling cascade involved in morphogenesis checkpoint","type":"exact"},{"name":"signaling cascade involved in septin checkpoint","type":"exact"},{"name":"signaling pathway involved in morphogenesis checkpoint","type":"exact"},{"name":"signaling pathway involved in septin checkpoint","type":"exact"},{"name":"signalling cascade involved in morphogenesis checkpoint","type":"exact"},{"name":"signalling cascade involved in septin checkpoint","type":"exact"},{"name":"signalling pathway involved in morphogenesis checkpoint","type":"exact"},{"name":"signalling pathway involved in septin checkpoint","type":"exact"}],"termid":"GO:0044879"}


id: GO:0014724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of twitch skeletal muscle contraction.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle contraction","termid":"GO:0014819"},{"relation_name":"regulates","term_name":"twitch skeletal muscle contraction","termid":"GO:0014721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of twitch skeletal muscle contraction","termid":"GO:0014724"}


id: PBO:0034518
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_nuclear_envelope_during_vegetative_growth","termid":"PBO:0034518"}


id: FYPO:0001763
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which tRNA methylation, the posttranscriptional addition of methyl groups to specific residues in a tRNA molecule, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0030488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal tRNA modification","termid":"FYPO:0001762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal tRNA methylation","synonyms":[{"name":"normal tRNA methylation during mitotic cell cycle","type":"related"},{"name":"normal tRNA methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0001763"}


id: PBO:0002818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Sck2","termid":"PBO:0002818"}


id: PBO:0084811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; mCherry fusion protein localizes to the vacuole","termid":"PBO:0084811"}


id: GO:0006562
data:
  {"annotated_genes":["SJAG_01903","SJAG_02235"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114070,103171],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010133"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proline metabolic process","termid":"GO:0006560"},{"relation_name":"is_a","term_name":"glutamine family amino acid catabolic process","termid":"GO:0009065"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01903":null,"SJAG_02235":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520","GO:0044248"],"is_obsolete":false,"name":"proline catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"proline breakdown","type":"exact"},{"name":"proline catabolism","type":"exact"},{"name":"proline degradation","type":"exact"}],"termid":"GO:0006562","terms_by_termid":{"GO:0010133":null}}


id: PBO:0091489
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"accumulation and persistence of Sfr1 foci in rad54delta cells","termid":"PBO:0091489"}


id: GO:0006434
data:
  {"annotated_genes":["SJAG_04762","SJAG_02977"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91493],"is_not":false,"summary":null,"term":"GO:0006434"},{"annotations":[90723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070158"}]},"cv_name":"biological_process","definition":"The process of coupling serine to seryl-tRNA, catalyzed by seryl-tRNA synthetase. The seryl-tRNA synthetase is a class-II synthetase. The activated amino acid is transferred to the 3'-OH group of a serine-accetping tRNA.","definition_xrefs":["ISBN:0716730510","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02977":null,"SJAG_04762":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006399","GO:0006520"],"is_obsolete":false,"name":"seryl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006434","terms_by_termid":{"GO:0006434":null,"GO:0070158":null}}


id: PBO:0088861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1/TPR repeat protein, protein kinase inhibitor Nif1","termid":"PBO:0088861"}


id: PBO:0091357
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catabolism of ARginine, after S. cerevisiae","termid":"PBO:0091357"}


id: PBO:0048151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYVE and coiled-coil domain autophagy adaptor 1","termid":"PBO:0048151"}


id: MOD:01730
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Proteome Sciences TMT6plex-127 reporter+balance group.","definition_xrefs":["Unimod:737#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent N-acylated residue","termid":"MOD:01717"},{"relation_name":"is_a","term_name":"TMT6plex-127 reporter+balance reagent acylated residue","termid":"MOD:01728"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-127 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01730"}


id: GO:0018230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a palmitoyl group to a sulfur (S) atom within a cysteine residue to form peptidyl-S-palmitoyl-L-cysteine.","definition_xrefs":["RESID:AA0106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine","termid":"GO:0018231"},{"relation_name":"is_a","term_name":"protein palmitoylation","termid":"GO:0018345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042158"}],"interesting_parent_ids":["GO:0008150","GO:0042158"],"is_obsolete":false,"name":"peptidyl-L-cysteine S-palmitoylation","synonyms":[{"name":"peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-cysteine S-palmitoylation","type":"exact"}],"termid":"GO:0018230"}


id: PBO:0109229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF4 pseudogene 1","termid":"PBO:0109229"}


id: PBO:0053723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 937","termid":"PBO:0053723"}


id: PBO:0001929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinate phosphoribosyltransferase (predicted)","termid":"PBO:0001929"}


id: GO:0030859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a polarized epithelial cell. The polarized epithelial cell can be any of the cells within an epithelium where the epithelial sheet is oriented with respect to the planar axis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"},{"relation_name":"part_of","term_name":"morphogenesis of a polarized epithelium","termid":"GO:0001738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polarized epithelial cell differentiation","termid":"GO:0030859"}


id: GO:0050047
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-leucine = (3R)-beta-leucine.","definition_xrefs":["RHEA:10284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular aminotransferase activity","termid":"GO:0016869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-leucine 2,3-aminomutase activity","secondary_identifiers":["EC:5.4.3.7","KEGG_REACTION:R01091","MetaCyc:LEUCINE-23-AMINOMUTASE-RXN"],"synonyms":[{"name":"(2S)-alpha-leucine 2,3-aminomutase activity","type":"related"},{"name":"leucine 2,3-aminomutase activity","type":"related"}],"termid":"GO:0050047"}


id: PBO:0047475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl diphosphate synthase pseudogene 2","termid":"PBO:0047475"}


id: SO:0000721
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a dicistronic primary transcript.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_with_dicistronic_transcript","termid":"SO:0000692"},{"relation_name":"transcribed_to","term_name":"dicistronic_primary_transcript","termid":"SO:1001197"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_dicistronic_primary_transcript","synonyms":[{"name":"gene with dicistronic primary transcript","type":"exact"}],"termid":"SO:0000721"}


id: GO:0060434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the bronchus is generated and organized. The bronchus is the portion of the airway that connects to the lungs.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"is_a","term_name":"tube morphogenesis","termid":"GO:0035239"},{"relation_name":"part_of","term_name":"bronchus development","termid":"GO:0060433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bronchus morphogenesis","termid":"GO:0060434"}


id: GO:0021717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the inferior olivary nucleus to attain its fully functional state. The inferior olivary nucleus is a capsule-shaped structure in the ventral medulla located just lateral and dorsal to the medullary pyramids. Neurons in the inferior olivary nucleus are the source of climbing fiber input to the cerebellar cortex; these neurons have been implicated in various functions, such as learning and timing of movements.","definition_xrefs":["ISBN:0838580343","GOC:dph","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"medulla oblongata maturation","termid":"GO:0021582"},{"relation_name":"part_of","term_name":"inferior olivary nucleus development","termid":"GO:0021713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inferior olivary nucleus maturation","synonyms":[{"name":"inferior olive maturation","type":"related"}],"termid":"GO:0021717"}


id: PBO:0113526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar aspartyl protease (proteinase A); required for post-translational precursor maturation of vacuolar proteinases; important for protein turnover after oxidative damage; plays a protective role in acetic acid induced apoptosis; synthesized as a zymogen, self-activates; targeted to vacuole via Vps10p-dependent endosomal vacuolar protein sorting pathway","termid":"PBO:0113526"}


id: PBO:0060546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAV2 intronic transcript 1","termid":"PBO:0060546"}


id: GO:1901552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endothelial cell development.","definition_xrefs":["PMID:19470579","GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of endothelial cell development","termid":"GO:1901550"},{"relation_name":"positively_regulates","term_name":"endothelial cell development","termid":"GO:0001885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endothelial cell development","synonyms":[{"name":"activation of endothelial cell development","type":"narrow"},{"name":"up regulation of endothelial cell development","type":"exact"},{"name":"up-regulation of endothelial cell development","type":"exact"},{"name":"upregulation of endothelial cell development","type":"exact"}],"termid":"GO:1901552"}


id: PBO:0029203
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_clotrimazole","termid":"PBO:0029203"}


id: PBO:0072418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 23","termid":"PBO:0072418"}


id: GO:0034744
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the tumor suppressor protein adenomatous polyposis coli (APC), the small GTPase Cdc42, and the Rac1 and Cdc42 effector IQGAP1; may play a role in cytoskeleton organization and cell migration.","definition_xrefs":["PMID:15572129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"GTPase complex","termid":"GO:1905360"},{"relation_name":"part_of","term_name":"cell leading edge","termid":"GO:0031252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"APC-IQGAP1-Cdc42 complex","termid":"GO:0034744"}


id: FYPO:0001328
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[115398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[115212],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[115386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[115216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000198"},{"annotations":[115470,115422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[115240],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003315"},{"annotations":[115419],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0002026"},{"annotations":[115387,115159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[115213],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cytoskeleton organization is abnormal in the vegetative growth phase of the cell cycle.","definition_xrefs":["GO:0007010","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytoskeleton organization","termid":"FYPO:0000802"},{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_03596":null,"SJAG_04280":null,"SJAG_04522":null,"SJAG_04703":null},"genotype_count":10,"genotypes_by_uniquename":{"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc15-A(L264P,P442T aa)","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]}]},"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta":{"display_name":"cdc15-A(L264P,P442T aa) mid1delta","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]},"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_04280","SJAG_03596","SJAG_04522","SJAG_02392"],"name":"abnormal cytoskeleton organization during vegetative growth","references_by_uniquename":{"PMID:25866389":null,"PMID:27059155":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_03596","SJAG_04703","SJAG_02392","SJAG_02592","SJAG_01143","SJAG_04280","SJAG_04522"],"single_locus_genotype_uniquenames":["rga4delta","sty1delta","cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","for3delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","pom1delta","mid1delta"],"synonyms":[{"name":"abnormal cytoskeleton organisation during vegetative growth","type":"exact"},{"name":"abnormal cytoskeleton organization during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001328","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000198":null,"FYPO:0000231":null,"FYPO:0000729":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0002998":null,"FYPO:0003315":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0005165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rik1-associated factor Raf2","termid":"PBO:0005165"}


id: FYPO:0000352
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"abnormal cytoskeleton morphology","termid":"FYPO:0003063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal cytoskeleton morphology during vegetative growth","synonyms":[{"name":"abnormal cytoskeleton morphology during mitotic cell cycle","type":"related"},{"name":"cytoskeleton morphology: abnormal","type":"related"}],"termid":"FYPO:0000352"}


id: GO:0010792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The 5' to 3' exonucleolytic resection of the DNA at the site of the break to form a 3' single-strand DNA overhang that results in the repair of a double strand break via single-strand annealing.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA double-strand break processing","termid":"GO:0000729"},{"relation_name":"part_of","term_name":"double-strand break repair via single-strand annealing","termid":"GO:0045002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"DNA double-strand break processing involved in repair via single-strand annealing","termid":"GO:0010792"}


id: PBO:0002537
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of proteasome","termid":"PBO:0002537"}


id: FYPO:0001094
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding at a replication origin by a gene product is normal (i.e. indistinguishable from wild type). The relevant gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal double-stranded DNA binding","termid":"FYPO:0007542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000653"],"is_obsolete":false,"name":"normal DNA replication origin binding","synonyms":[{"name":"normal origin binding","type":"exact"}],"termid":"FYPO:0001094"}


id: PATO:0000005
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000005 absolute activity (obsolete PATO:0000005)","termid":"PATO:0000005"}


id: PBO:0074222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 45 member 1","termid":"PBO:0074222"}


id: GO:1905599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of low-density lipoprotein receptor activity.","definition_xrefs":["GOC:BHF","GOC:nc","GOC:TermGenie","GO_REF:0000059","PMID:22848640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of molecular function","termid":"GO:0044093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of low-density lipoprotein receptor activity","synonyms":[{"name":"activation of LDL receptor","type":"narrow"},{"name":"activation of LDLR activity","type":"narrow"},{"name":"activation of low-density lipoprotein receptor activity","type":"narrow"},{"name":"positive regulation of LDL receptor","type":"exact"},{"name":"positive regulation of LDLR activity","type":"exact"},{"name":"up regulation of LDL receptor","type":"exact"},{"name":"up regulation of LDLR activity","type":"exact"},{"name":"up regulation of low-density lipoprotein receptor activity","type":"exact"},{"name":"up-regulation of LDL receptor","type":"exact"},{"name":"up-regulation of LDLR activity","type":"exact"},{"name":"up-regulation of low-density lipoprotein receptor activity","type":"exact"},{"name":"upregulation of LDL receptor","type":"exact"},{"name":"upregulation of LDLR activity","type":"exact"},{"name":"upregulation of low-density lipoprotein receptor activity","type":"exact"}],"termid":"GO:1905599"}


id: PBO:0090205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body half bridge protein Sfi1","termid":"PBO:0090205"}


id: GO:0038196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by type III interferon binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. Interferon lambda is the only member of the type III interferon found so far.","definition_xrefs":["PMID:32464097","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interferon-mediated signaling pathway","termid":"GO:0140888"},{"relation_name":"part_of","term_name":"cellular response to type III interferon","termid":"GO:0071358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"type III interferon-mediated signaling pathway","synonyms":[{"name":"interferon lambda signaling pathway","type":"narrow"},{"name":"type III interferon signaling pathway","type":"exact"},{"name":"type III interferon-activated signaling pathway","type":"exact"}],"termid":"GO:0038196"}


id: PBO:0072125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 2","termid":"PBO:0072125"}


id: GO:1902794
data:
  {"annotated_genes":["SJAG_02382","SJAG_04186","SJAG_00769","SJAG_01867","SJAG_03624","SJAG_03844","SJAG_04574","SJAG_03664","SJAG_01599","SJAG_02622","SJAG_04768"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83574,86853,100255,106542,108170,112614,114181],"is_not":false,"summary":null,"term":"GO:1902794"},{"annotations":[113822,96364,114178,87911,93256],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902801"}]},"cv_name":"biological_process","definition":"The formation of facultative heterochromatin into a heterochromatin domain, enriched in histone H3 methylated on lysine 9 (H3K9me), by a process independent of small interfering RNAs.","definition_xrefs":["PMID:24210919","PMID:22144463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facultative heterochromatin formation","termid":"GO:0140718"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00769":null,"SJAG_01599":null,"SJAG_01867":null,"SJAG_02382":null,"SJAG_02622":null,"SJAG_03624":null,"SJAG_03664":null,"SJAG_03844":null,"SJAG_04186":null,"SJAG_04574":null,"SJAG_04768":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0006325","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"siRNA-independent facultative heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"heterochromatin island assembly","type":"exact"},{"name":"heterochromatin island formation","type":"exact"},{"name":"siRNA-independent facultative heterochromatin assembly","type":"exact"}],"termid":"GO:1902794","terms_by_termid":{"GO:1902794":null,"GO:1902801":null}}


id: PBO:0050835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"islet amyloid polypeptide","termid":"PBO:0050835"}


id: SO:0001557
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which causes gain of polypeptide function with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_function_variant","termid":"SO:0001554"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide_gain_of_function_variant","synonyms":[{"name":"polypeptide gain of function variant","type":"exact"}],"termid":"SO:0001557"}


id: GO:0033590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cobalamin (vitamin B12) stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cobalamin","synonyms":[{"name":"response to vitamin B12","type":"exact"}],"termid":"GO:0033590"}


id: PR:O59759
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1020.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1020.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1020.05","synonyms":[{"name":"Spom972h-SPCC1020.05","type":"exact"}],"termid":"PR:O59759"}


id: GO:0047511
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-methylmalonyl-CoA + H2O = CoA + H+ + methylmalonate.","definition_xrefs":["RHEA:17345","EC:3.1.2.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA hydrolase activity","termid":"GO:0016289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"(S)-methylmalonyl-CoA hydrolase activity","secondary_identifiers":["KEGG_REACTION:R02764","MetaCyc:S-METHYLMALONYL-COA-HYDROLASE-RXN"],"synonyms":[{"name":"D-methylmalonyl-coenzyme A hydrolase activity","type":"related"}],"termid":"GO:0047511"}


id: PBO:0087338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Specificity factor required for Rsp5p-dependent ubiquitination; also required for sorting of specific cargo proteins at the multivesicular body; mRNA is targeted to the bud via the mRNA transport system involving She2p","termid":"PBO:0087338"}


id: GO:0050749
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively with an apolipoprotein E receptor.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete apolipoprotein E receptor binding (obsolete GO:0050749)","synonyms":[{"name":"apolipoprotein E receptor binding","type":"exact"}],"termid":"GO:0050749"}


id: PBO:0035747
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cytoplasmic_microtubules_nucleated_from_eMTOC_present_in_decreased_numbers","termid":"PBO:0035747"}


id: GO:1990912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a microwave radiation stimulus.","definition_xrefs":["PMID:21241601"],"gene_count":0,"genotype_count":0,"name":"obsolete response to microwave radiation (obsolete GO:1990912)","termid":"GO:1990912"}


id: PBO:0048622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GINS complex subunit 3","termid":"PBO:0048622"}


id: GO:0140460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a Gram-negative bacterium.","definition_xrefs":["PMID:23664307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to bacterium","termid":"GO:0009617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to Gram-negative bacterium","termid":"GO:0140460"}


id: PBO:0042415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 26 pseudogene 1","termid":"PBO:0042415"}


id: PBO:0075556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spen family transcriptional repressor","termid":"PBO:0075556"}


id: PBO:0029089
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_spheroid_cell","termid":"PBO:0029089"}


id: FYPO:0003738
data:
  {"alleles_by_uniquename":{"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115625],"is_not":false,"summary":null,"term":"FYPO:0003738"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested when cells have condensed chromosomes, but show no other signs of having entered mitosis or M phase, under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormally arrested mitotic cell cycle progression","termid":"FYPO:0000502"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04464":null},"genotype_count":1,"genotypes_by_uniquename":{"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic cell cycle arrest with condensed chromosomes","references_by_uniquename":{"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_04464"],"single_locus_genotype_uniquenames":["pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal cell cycle arrest with condensed chromosomes during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic cell cycle arrest with condensed chromosomes during vegetative growth","type":"exact"}],"termid":"FYPO:0003738","terms_by_termid":{"FYECO:0000004":null,"FYPO:0003738":null}}


id: PBO:0083089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA binding protein with possible chromatin-reorganizing activity; involved in transcriptional activation, gene silencing, and DNA replication and repair","termid":"PBO:0083089"}


id: PBO:0078323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA aspartic acid methyltransferase 1","termid":"PBO:0078323"}


id: PBO:0086073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that may interact with ribosomes; periodically expressed during the yeast metabolic cycle; phosphorylated in vitro by the mitotic exit network (MEN) kinase complex, Dbf2p/Mob1p","termid":"PBO:0086073"}


id: PBO:0070165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 79 pseudogene","termid":"PBO:0070165"}


id: GO:0009658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the chloroplast.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid organization","termid":"GO:0009657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chloroplast organization","synonyms":[{"name":"chloroplast organisation","type":"exact"},{"name":"chloroplast organization and biogenesis","type":"related"}],"termid":"GO:0009658"}


id: GO:1902597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA replication origin binding.","definition_xrefs":["GO_REF:0000059","PMID:11850415","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA binding","termid":"GO:0043388"},{"relation_name":"is_a","term_name":"regulation of DNA replication origin binding","termid":"GO:1902595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of DNA replication origin binding","synonyms":[{"name":"activation of ARS binding","type":"narrow"},{"name":"activation of DNA replication origin binding","type":"narrow"},{"name":"positive regulation of ARS binding","type":"narrow"},{"name":"up regulation of ARS binding","type":"narrow"},{"name":"up regulation of DNA replication origin binding","type":"exact"},{"name":"up-regulation of ARS binding","type":"narrow"},{"name":"up-regulation of DNA replication origin binding","type":"exact"},{"name":"upregulation of ARS binding","type":"narrow"},{"name":"upregulation of DNA replication origin binding","type":"exact"}],"termid":"GO:1902597"}


id: FYPO:0004807
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which the cell is narrower than normal at the point where cell fusion occurred during mating. Normally, the cell expands at the fusion site after fusion takes place.","definition_xrefs":["PomBase:mah","PMID:25825517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell shape","termid":"FYPO:0001126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"narrow cell fusion site following mating","synonyms":[{"name":"narrow cell fusion site following conjugation","type":"exact"},{"name":"narrow cell fusion site following conjugation with cellular fusion","type":"exact"},{"name":"narrow cell-cell fusion site following conjugation with cellular fusion","type":"exact"}],"termid":"FYPO:0004807"}


id: PBO:0002480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase pseudogene","termid":"PBO:0002480"}


id: PR:Q9USW0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC21B10.02 gene.","definition_xrefs":["UniProtKB:Q9USW0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C21B10.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21B10.02","synonyms":[{"name":"Spom972h-SPBC21B10.02","type":"exact"}],"termid":"PR:Q9USW0"}


id: GO:0060202
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of the clathrin-sculpted acetylcholine transport vesicle.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"clathrin-sculpted acetylcholine transport vesicle","termid":"GO:0060200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"clathrin-sculpted acetylcholine transport vesicle lumen","synonyms":[{"name":"clathrin sculpted acetylcholine constitutive secretory pathway transport vesicle lumen","type":"exact"},{"name":"clathrin sculpted acetylcholine transport vesicle lumen","type":"exact"}],"termid":"GO:0060202"}


id: GO:0140693
data:
  {"annotated_genes":["SJAG_03905","SJAG_03023","SJAG_02045","SJAG_04640"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87445,88600,98974,101627],"is_not":false,"summary":null,"term":"GO:0140693"}]},"cv_name":"molecular_function","definition":"Binding and bringing together two or more macromolecules in contact, permitting those molecules to organize as a molecular condensate.","definition_xrefs":["PMID:28225081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-macromolecule adaptor activity","termid":"GO:0030674"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02045":null,"SJAG_03023":null,"SJAG_03905":null,"SJAG_04640":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0030674"],"is_obsolete":false,"name":"molecular condensate scaffold activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"phase separation nucleation activity","type":"exact"},{"name":"phase separation nucleator activity","type":"exact"}],"termid":"GO:0140693","terms_by_termid":{"GO:0140693":null}}


id: PBO:0076992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP7 antisense RNA 1","termid":"PBO:0076992"}


id: PATO:0001124
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001124 pressure value (obsolete PATO:0001124)","termid":"PATO:0001124"}


id: GO:0102248
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 a 1,2-diacyl-sn-glycerol = a triacyl-sn-glycerol + a 2-monoglyceride.","definition_xrefs":["EC:2.3.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"diacylglycerol transacylase activity","secondary_identifiers":["MetaCyc:RXN-12383"],"termid":"GO:0102248"}


id: GO:0022873
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + maltose(out) = protein histidine + maltose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maltose transmembrane transporter activity","termid":"GO:0005363"},{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0016740","GO:0005215","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-maltose phosphotransferase system transporter activity","synonyms":[{"name":"maltose PTS transporter activity","type":"exact"}],"termid":"GO:0022873"}


id: GO:0051723
data:
  {"annotated_genes":["SJAG_01628"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051722"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: protein amino acid methyl ester + H2O = protein amino acid + methanol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01628":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"protein methylesterase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5367022"],"synonyms":[{"name":"PME activity","type":"related"},{"name":"protein carboxyl methylesterase activity","type":"related"},{"name":"protein carboxylic ester hydrolase activity","type":"exact"},{"name":"protein methyl-esterase activity","type":"related"}],"termid":"GO:0051723","terms_by_termid":{"GO:0051722":null}}


id: GO:0008478
data:
  {"annotated_genes":["SJAG_01383","SJAG_00252"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95751,111766],"is_not":false,"summary":null,"term":"GO:0008478"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + pyridoxal = ADP + pyridoxal 5'-phosphate.","definition_xrefs":["EC:2.7.1.35"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00252":null,"SJAG_01383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"pyridoxal kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PYRIDOXKIN-RXN","Reactome:R-HSA-964970","RHEA:10224","Reactome:R-HSA-964958","Reactome:R-HSA-964962"],"synonyms":[{"name":"ATP:pyridoxal 5'-phosphotransferase activity","type":"related"},{"name":"pyridoxal 5-phosphate-kinase activity","type":"related"},{"name":"pyridoxal kinase (phosphorylating)","type":"related"},{"name":"pyridoxal phosphokinase activity","type":"related"},{"name":"pyridoxamine kinase activity","type":"related"},{"name":"pyridoxine kinase activity","type":"related"},{"name":"vitamin B(6) kinase activity","type":"related"},{"name":"vitamin B6 kinase activity","type":"related"}],"termid":"GO:0008478","terms_by_termid":{"GO:0008478":null}}


id: PR:O14443
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GPN-loop GTPase 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR21231:SF4","OMA:SCHPO02232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPN-loop GTPase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.12c","secondary_identifiers":["UniProtKB:O14443"],"synonyms":[{"name":"Spom972h-GPN3","type":"exact"},{"name":"factor of eukaryotic transcription 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14443"}


id: PBO:0077983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon TGC) 5-1","termid":"PBO:0077983"}


id: GO:0090164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The asymmetric formation of a continuous ribbon of interconnected Golgi stacks of flat cisternae that contributes to the establishment of epithelial cell polarity.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi ribbon formation","termid":"GO:0090161"},{"relation_name":"part_of","term_name":"establishment of epithelial cell polarity","termid":"GO:0090162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"asymmetric Golgi ribbon formation","termid":"GO:0090164"}


id: GO:0009821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of alkaloids, nitrogen-containing natural products which are not otherwise classified as nonprotein amino acids, amines, peptides, amines, cyanogenic glycosides, glucosinolates, cofactors, phytohormones, or primary metabolite (such as purine or pyrimidine bases).","definition_xrefs":["ISBN:0122146743","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid metabolic process","termid":"GO:0009820"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"alkaloid biosynthetic process","synonyms":[{"name":"alkaloid anabolism","type":"exact"},{"name":"alkaloid biosynthesis","type":"exact"},{"name":"alkaloid formation","type":"exact"},{"name":"alkaloid synthesis","type":"exact"}],"termid":"GO:0009821"}


id: GO:0002413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of tolerance induction which leads to immunological tolerance of a tumor.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response to tumor cell","termid":"GO:0002418"},{"relation_name":"is_a","term_name":"peripheral tolerance induction","termid":"GO:0002465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tolerance induction to tumor cell","termid":"GO:0002413"}


id: PBO:0028190
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_branched,_elongated,_multiseptate_vegetative_cell","termid":"PBO:0028190"}


id: GO:0050121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acyl-D-glucosamine = N-acyl-D-mannosamine.","definition_xrefs":["MetaCyc:N-ACYLGLUCOSAMINE-2-EPIMERASE-RXN","EC:5.1.3.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"N-acylglucosamine 2-epimerase activity","secondary_identifiers":["Reactome:R-HSA-6803761","RHEA:19033"],"synonyms":[{"name":"GlcNAc 2-epimerase activity","type":"related"},{"name":"N-acetyl-D-glucosamine 2-epimerase activity","type":"related"},{"name":"N-acetylglucosamine 2-epimerase activity","type":"related"},{"name":"N-acyl-D-glucosamine 2-epimerase activity","type":"related"},{"name":"acylglucosamine 2-epimerase activity","type":"related"}],"termid":"GO:0050121"}


id: FYPO:0006695
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of S-adenosyl-L-methionine (SAM) measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular S-adenosyl-L-methionine level during vegetative growth","synonyms":[{"name":"decreased S-adenosyl-L-methionine accumulation during vegetative growth","type":"related"},{"name":"decreased cellular S-adenosyl-L-methionine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular S-adenosylmethionine level during vegetative growth","type":"exact"},{"name":"decreased cellular SAM level during vegetative growth","type":"exact"},{"name":"reduced cellular S-adenosyl-L-methionine level during vegetative growth","type":"exact"}],"termid":"FYPO:0006695"}


id: GO:0051322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase, following metaphase, during which the chromosomes separate and migrate towards the poles of the spindle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase","termid":"GO:0022403"},{"relation_name":"part_of","term_name":"M phase","termid":"GO:0000279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anaphase","secondary_identifiers":["Wikipedia:Anaphase"],"termid":"GO:0051322"}


id: PBO:0083365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene TRM5/YHR070W","termid":"PBO:0083365"}


id: GO:0033716
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: adenosine + 2 O2 = 9-riburonosyladenine + 2 hydrogen peroxide.","definition_xrefs":["EC:1.1.3.39","RHEA:15489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"nucleoside oxidase (hydrogen peroxide-forming) activity","secondary_identifiers":["MetaCyc:1.1.3.39-RXN"],"synonyms":[{"name":"nucleoside:oxygen 5'-oxidoreductase (hydrogen peroxide-forming) activity","type":"related"}],"termid":"GO:0033716"}


id: GO:0047277
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-D-galactosaminyl-(1,3)-D-galactosyl-(1,4)-D-galactosyl-(1,4)-D-glucosylceramide + UDP-N-acetylgalactosamine = N-acetyl-D-galactosaminyl-N-acetyl-D-galactosaminyl-(1,3)-D-galactosyl-(1,4)-D-galactosyl-(1,4)-D-glucosylceramide + UDP.","definition_xrefs":["MetaCyc:2.4.1.88-RXN","EC:2.4.1.88"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylgalactosaminyltransferase activity","termid":"GO:0008376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"globoside alpha-N-acetylgalactosaminyltransferase activity","secondary_identifiers":["RHEA:22164"],"synonyms":[{"name":"Forssman synthase activity","type":"related"},{"name":"UDP-N-acetyl-D-galactosamine:N-acetyl-D-galactosaminyl-1,3-D-galactosyl-1,4-D-galactosyl-1,4-D-glucosylceramide alpha-N-acetyl-D-galactosaminyltransferase activity","type":"related"},{"name":"globoside acetylgalactosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylgalactosamine-globoside alpha-acetylgalactosaminyltransferase activity","type":"related"}],"termid":"GO:0047277"}


id: PBO:0000098
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"with","termid":"PBO:0000098"}


id: GO:0019069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a virus capsid from its protein subunits.","definition_xrefs":["ISBN:0781702534","PMID:22615368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"virion assembly","termid":"GO:0019068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral capsid assembly","secondary_identifiers":["VZ:1950"],"termid":"GO:0019069"}


id: GO:0008763
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-alanine + ATP + UDP-N-acetylmuramate = ADP + 2 H+ + phosphate + UDP-N-acetylmuramoyl-L-alanine.","definition_xrefs":["EC:6.3.2.8","RHEA:23372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"UDP-N-acetylmuramate-L-alanine ligase activity","secondary_identifiers":["MetaCyc:UDP-NACMUR-ALA-LIG-RXN","KEGG_REACTION:R03193"],"synonyms":[{"name":"L-Ala ligase activity","type":"related"},{"name":"L-alanine-adding enzyme activity","type":"related"},{"name":"MurC synthetase activity","type":"narrow"},{"name":"UDP-MurNAc:L-alanine ligase activity","type":"related"},{"name":"UDP-N-acetylmuramate:L-alanine ligase (ADP-forming)","type":"related"},{"name":"UDP-N-acetylmuramoyl-L-alanine synthetase activity","type":"related"},{"name":"UDP-N-acetylmuramoylalanine synthetase activity","type":"related"},{"name":"UDP-N-acetylmuramyl:L-alanine ligase activity","type":"related"},{"name":"UDP-acetylmuramyl-L-alanine synthetase activity","type":"related"},{"name":"UDPMurNAc-L-alanine synthetase activity","type":"related"},{"name":"alanine-adding enzyme activity","type":"related"},{"name":"uridine 5'-diphosphate-N-acetylmuramyl-L-alanine synthetase activity","type":"related"},{"name":"uridine diphosphate N-acetylmuramate:L-alanine ligase activity","type":"related"},{"name":"uridine diphospho-N-acetylmuramoylalanine synthetase activity","type":"related"},{"name":"uridine-diphosphate-N-acetylmuramate:L-alanine ligase activity","type":"related"}],"termid":"GO:0008763"}


id: PBO:0070910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 18","termid":"PBO:0070910"}


id: GO:0042472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the inner ear are generated and organized. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively.","definition_xrefs":["ISBN:0192801023","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"ear morphogenesis","termid":"GO:0042471"},{"relation_name":"part_of","term_name":"inner ear development","termid":"GO:0048839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner ear morphogenesis","termid":"GO:0042472"}


id: PBO:0041365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 4 open reading frame 33","termid":"PBO:0041365"}


id: PBO:0071661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37a pseudogene 2","termid":"PBO:0071661"}


id: PBO:0039778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 7 pseudogene 3","termid":"PBO:0039778"}


id: SO:1000025
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transversion from adenine to thymine.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine_to_pyrimidine_transversion","termid":"SO:1000023"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A_to_T_transversion","synonyms":[{"name":"A to T transversion","type":"exact"}],"termid":"SO:1000025"}


id: PBO:0000852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-S isoprenylcysteine O-methyltransferase Mam4","termid":"PBO:0000852"}


id: FYPO:0000407
data:
  {"alleles_by_uniquename":{"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"}],"single_locus_phenotype":[{"annotations":[115631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"},{"annotations":[115625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003738"},{"annotations":[115390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell cycle progression is arrested under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle arrest phenotype","termid":"FYPO:0001024"},{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00871":null,"SJAG_04284":null,"SJAG_04332":null,"SJAG_04464":null},"genotype_count":4,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]},"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut3-T19E(aa) pim1-R152C(aa)","display_uniquename":"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00871:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_00871","SJAG_04464"],"name":"abnormally arrested cell cycle progression","references_by_uniquename":{"PMID:25866389":null,"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_04332","SJAG_04284","SJAG_04464"],"single_locus_genotype_uniquenames":["pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","nup61delta","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal cell cycle arrest","type":"exact"},{"name":"abnormally arrested cell cycle progression during mitotic cell cycle","type":"related"},{"name":"abnormally arrested cell cycle progression during vegetative growth","type":"exact"},{"name":"cell cycle progression: arrested","type":"related"}],"termid":"FYPO:0000407","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000619":null,"FYPO:0003738":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: PR:O14146
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 51 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR15954:SF4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 51 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G6.10c","secondary_identifiers":["UniProtKB:O14146"],"synonyms":[{"name":"GARP complex subunit vps51 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC3G6.10c","type":"related"},{"name":"Spom972h-VPS51","type":"exact"}],"termid":"PR:O14146"}


id: GO:0002297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a CD4-positive, alpha-beta T cell becomes committed to becoming a T-helper 2 cell, a CD4-positive, alpha-beta T cell specialized to promote immunological processes often associated with resistance to extracellular organisms such as helminths, enhanced production of particular antibody isotypes, and pathological conditions such as allergy.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-helper cell lineage commitment","termid":"GO:0002295"},{"relation_name":"part_of","term_name":"T-helper 2 cell differentiation","termid":"GO:0045064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 2 cell lineage commitment","synonyms":[{"name":"T-helper 2 cell fate commitment","type":"exact"},{"name":"Th2 fate commitment","type":"exact"}],"termid":"GO:0002297"}


id: PBO:0090481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-A chaperone, CHD family Hrp1","termid":"PBO:0090481"}


id: PBO:0038405
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causally_upstream_of_or_within,_positive_effect","termid":"PBO:0038405"}


id: PBO:0067319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 405, pseudogene","termid":"PBO:0067319"}


id: PBO:0003571
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADhesioN defective","termid":"PBO:0003571"}


id: PATO:0002291
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Absence of a tissue or organ due to failure to develop.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"absent","termid":"PATO:0000462"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agenesis","termid":"PATO:0002291"}


id: PBO:0056068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 6 family member D","termid":"PBO:0056068"}


id: PR:O94437
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein ABHD11 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain-containing protein C22H12.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H12.03","secondary_identifiers":["UniProtKB:O94437"],"synonyms":[{"name":"Spom972h-ABHD11","type":"exact"}],"termid":"PR:O94437"}


id: PR:O13756
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01486","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A2.06c","secondary_identifiers":["UniProtKB:O13756"],"synonyms":[{"name":"Spom972h-VPS8","type":"exact"},{"name":"vacuolar protein-targeting protein 8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13756"}


id: PBO:0057871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3179-4","termid":"PBO:0057871"}


id: PBO:0080398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS28 subunit of ESCRT-I","termid":"PBO:0080398"}


id: GO:0008389
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: coumarin + O2 + NADPH + H+ = hydroxycoumarin + H2O + NADP+.","definition_xrefs":["PMID:2733794","PMID:10490589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"coumarin 7-hydroxylase activity","secondary_identifiers":["Reactome:R-HSA-76453","Reactome:R-HSA-211881"],"synonyms":[{"name":"cytochrome P450 CYP2A5","type":"narrow"}],"termid":"GO:0008389"}


id: PBO:0076195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 4","termid":"PBO:0076195"}


id: GO:0140714
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that assists early maturation of nascent 60S ribosomal subunits. The complex interacts with the large ribosomal subunit rRNA via one of the components (Urb2 in S. cerevisiae) and requires a RNA helicase (Dbp6 in S. cerevisiae).","definition_xrefs":["PMID:9528757","PMID:17145778","GOC:lnp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein folding chaperone complex","termid":"GO:0101031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"large ribosomal subunit pre-assembly complex","termid":"GO:0140714"}


id: SO:0001023
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An allele is one of a set of coexisting sequence variants of a gene.","definition_xrefs":["SO:immuno_workshop"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variant_collection","termid":"SO:0001507"},{"relation_name":"variant_of","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allele","secondary_identifiers":["http://en.wikipedia.org/wiki/Allele"],"synonyms":[{"name":"allelomorph","type":"exact"}],"termid":"SO:0001023"}


id: PBO:0017610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat protein, human PPP1R16A ortholog","termid":"PBO:0017610"}


id: PBO:0058693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6821","termid":"PBO:0058693"}


id: PBO:0082102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA-ATPase involved in multivesicular body (MVB) protein sorting; ATP-bound Vps4p localizes to endosomes and catalyzes ESCRT-III disassembly and membrane release; ATPase activity is activated by Vta1p; regulates cellular sterol metabolism","termid":"PBO:0082102"}


id: MOD:00084
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6,N6-dimethyl-L-lysine.","definition_xrefs":["PubMed:3100523","PubMed:8453381","OMSSA:36","PubMed:12964758","RESID:AA0075","PubMed:14570711","Unimod:36#K","PubMed:10550045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dimethylated residue","termid":"MOD:00429"},{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"},{"relation_name":"is_a","term_name":"methylated lysine","termid":"MOD:00663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N6,N6-dimethyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(dimethylamino)hexanoic acid","type":"exact"},{"name":"Dimethyl","type":"related"},{"name":"MOD_RES N6,N6-dimethyllysine","type":"exact"},{"name":"N(zeta)-dimethyllysine","type":"exact"},{"name":"N6,N6-dimethyl-L-lysine","type":"exact"},{"name":"N6,N6-dimethylated L-lysine","type":"exact"},{"name":"N6Me2Lys","type":"exact"},{"name":"di-Methylation","type":"related"},{"name":"dimethylk","type":"exact"},{"name":"epsilon-dimethyllysine","type":"exact"},{"name":"lysine derivative Lys(y)","type":"exact"}],"termid":"MOD:00084"}


id: PBO:0083255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; largely overlaps ORF YPL113C; diploid deletion in BY4743 strain background exhibits high budding index","termid":"PBO:0083255"}


id: GO:0160022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of a substance by a cell or a tissue by discharging a portion of the secreting cell when intracellular components are freed into a lumen through the shedding of whole pieces of the cytoplasm.","definition_xrefs":["PMID:25960390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion","termid":"GO:0046903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"apocrine secretion","synonyms":[{"name":"secretion by cell decapitation","type":"related"},{"name":"secretion by membrane budding","type":"related"}],"termid":"GO:0160022"}


id: PBO:0052480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch domain containing 7B","termid":"PBO:0052480"}


id: PBO:0027807
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_KT5823","termid":"PBO:0027807"}


id: PBO:0039221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 7 member A2","termid":"PBO:0039221"}


id: PBO:0091393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal multispanning membrane protein","termid":"PBO:0091393"}


id: PBO:0063132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARP1 binding protein","termid":"PBO:0063132"}


id: PBO:0017769
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements E. coli rusA and ruvC","termid":"PBO:0017769"}


id: PBO:0028815
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_primary_amine_oxidase_activity","termid":"PBO:0028815"}


id: PBO:0060720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A8 pseudogene 1","termid":"PBO:0060720"}


id: PBO:0001115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO-targeted ubiquitin-protein ligase subunit Rfp2","termid":"PBO:0001115"}


id: FYECO:0000200
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which peptone was added to the medium or assay buffer in excess. Peptone is a mixture of nutrients generated by proteolytic digestion of animal protein with pepsin and serves as a nitrogen and amino acid source in some culture media. Peptone is not normally added to S. pombe growth media.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ peptone","termid":"FYECO:0000200"}


id: GO:0032644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of fractalkine production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"fractalkine production","termid":"GO:0032603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of fractalkine production","secondary_identifiers":["GO:0050752"],"synonyms":[{"name":"regulation of CX3CL1 biosynthesis","type":"narrow"},{"name":"regulation of CX3CL1 production","type":"narrow"},{"name":"regulation of fractalkine biosynthetic process","type":"narrow"}],"termid":"GO:0032644"}


id: GO:0046156
data:
  {"annotated_genes":["SJAG_01786","SJAG_01192"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111501,93858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019354"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving siroheme, a tetrahydroporphyrin with adjacent, reduced pyrrole rings.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme metabolic process","termid":"GO:0042168"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01192":null,"SJAG_01786":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"siroheme metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"sirohaem metabolic process","type":"exact"},{"name":"sirohaem metabolism","type":"exact"},{"name":"siroheme metabolism","type":"exact"}],"termid":"GO:0046156","terms_by_termid":{"GO:0019354":null}}


id: FYPO:0000181
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A DNA recombination phenotype observed in the vegetative growth phase of the life cycle in which reciprocal DNA recombination does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination during vegetative growth","termid":"FYPO:0001345"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000293","FYPO:0005447"],"is_obsolete":false,"name":"abolished crossover","synonyms":[{"name":"DNA recombination defects, crossover, abolished","type":"exact"},{"name":"abolished crossover during mitotic cell cycle","type":"related"},{"name":"crossover abolished","type":"exact"},{"name":"crossover abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0000181"}


id: PBO:0030749
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_arsenic","termid":"PBO:0030749"}


id: GO:0016254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stepwise addition of the components of the GPI anchor on to phosphatidylinositol lipids in the endoplasmic reticulum membrane.","definition_xrefs":["ISBN:0879695595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid metabolic process","termid":"GO:0006650"},{"relation_name":"part_of","term_name":"GPI anchor biosynthetic process","termid":"GO:0006506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006629"},{"rel_name":"part_of","termid":"GO:0042158"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0042158"],"is_obsolete":false,"name":"preassembly of GPI anchor in ER membrane","synonyms":[{"name":"preassembly of GPI anchor in endoplasmic reticulum membrane","type":"exact"}],"termid":"GO:0016254"}


id: PBO:0042624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 1","termid":"PBO:0042624"}


id: GO:0102142
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphonato-5'-adenylyl sulfate + [dermatan]-alpha-L-iduronate = adenosine 3',5'-bismonophosphate + [dermatan-sulfate]-2-O-sulfo-alpha-L-iduronate.","definition_xrefs":["EC:2.8.2.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016782"],"is_obsolete":false,"name":"[dermatan sulfate]-L-iduronyl 2-Osulfotransferase activity","secondary_identifiers":["MetaCyc:RXN-11561"],"termid":"GO:0102142"}


id: GO:0003086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which angiotensinogen metabolites in the kidney modulate the force with which blood passes through the renal circulatory system. The process begins when renin cleaves angiotensinogen.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by renin-angiotensin","termid":"GO:0003081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by local renal renin-angiotensin","termid":"GO:0003086"}


id: GO:0009945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of an axis that initiates at a point and radiates outward from the point.","definition_xrefs":["GOC:isa_complete","GOC:go_curators","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axis specification","termid":"GO:0009798"},{"relation_name":"part_of","term_name":"radial pattern formation","termid":"GO:0009956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"radial axis specification","termid":"GO:0009945"}


id: FYPO:0000864
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in centromeric regions is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 trimethylation during vegetative growth","termid":"FYPO:0000787"},{"relation_name":"is_a","term_name":"abnormal histone methylation at centromere during vegetative growth","termid":"FYPO:0007374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"abnormal histone H3-K9 trimethylation at centromere during vegetative growth","synonyms":[{"name":"abnormal centromeric histone H3-K9 trimethylation during vegetative growth","type":"exact"},{"name":"abnormal histone H3 K9 trimethylation at centromere during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 trimethylation at centromere during mitotic cell cycle","type":"related"},{"name":"abnormal histone H3K9 trimethylation at centromere during vegetative growth","type":"exact"},{"name":"abnormal histone H3K9me3 at centromere during vegetative growth","type":"exact"},{"name":"abnormal histone lysine H3 K9 trimethylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0000864"}


id: GO:1903181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dopamine biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:TermGenie","GOC:PARL","PMID:19703902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of dopamine metabolic process","termid":"GO:0045964"},{"relation_name":"is_a","term_name":"regulation of dopamine biosynthetic process","termid":"GO:1903179"},{"relation_name":"positively_regulates","term_name":"dopamine biosynthetic process","termid":"GO:0042416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dopamine biosynthetic process","synonyms":[{"name":"activation of dopamine anabolism","type":"narrow"},{"name":"activation of dopamine biosynthesis","type":"narrow"},{"name":"activation of dopamine biosynthetic process","type":"narrow"},{"name":"activation of dopamine formation","type":"narrow"},{"name":"activation of dopamine synthesis","type":"narrow"},{"name":"positive regulation of dopamine anabolism","type":"exact"},{"name":"positive regulation of dopamine biosynthesis","type":"exact"},{"name":"positive regulation of dopamine formation","type":"exact"},{"name":"positive regulation of dopamine synthesis","type":"exact"},{"name":"up regulation of dopamine anabolism","type":"exact"},{"name":"up regulation of dopamine biosynthesis","type":"exact"},{"name":"up regulation of dopamine biosynthetic process","type":"exact"},{"name":"up regulation of dopamine formation","type":"exact"},{"name":"up regulation of dopamine synthesis","type":"exact"},{"name":"up-regulation of dopamine anabolism","type":"exact"},{"name":"up-regulation of dopamine biosynthesis","type":"exact"},{"name":"up-regulation of dopamine biosynthetic process","type":"exact"},{"name":"up-regulation of dopamine formation","type":"exact"},{"name":"up-regulation of dopamine synthesis","type":"exact"},{"name":"upregulation of dopamine anabolism","type":"exact"},{"name":"upregulation of dopamine biosynthesis","type":"exact"},{"name":"upregulation of dopamine biosynthetic process","type":"exact"},{"name":"upregulation of dopamine formation","type":"exact"},{"name":"upregulation of dopamine synthesis","type":"exact"}],"termid":"GO:1903181"}


id: PBO:0052077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin regulatory subunit B1 like 1 pseudogene 2","termid":"PBO:0052077"}


id: PBO:0087634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the EGO/GSE complex; the vacuolar/endosomal membrane associated EGO/GSE complex regulates exit from rapamycin-induced growth arrest, stimulating microautophagy and sorting of Gap1p from the endosome to the plasma membrane; loss results in a defect in vacuolar acidification","termid":"PBO:0087634"}


id: GO:0035742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of an activated CD8-positive, alpha-beta T cell population by cell division.","definition_xrefs":["CL:0000906","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD8-positive, alpha-beta T cell proliferation","termid":"GO:0035740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activated CD8-positive, alpha-beta T cell proliferation","termid":"GO:0035742"}


id: GO:0046966
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a nuclear thyroid hormone receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor binding","termid":"GO:0016922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"nuclear thyroid hormone receptor binding","synonyms":[{"name":"ligand-dependent thyroid hormone receptor interactor activity","type":"narrow"},{"name":"thyroid hormone receptor binding","type":"broad"}],"termid":"GO:0046966"}


id: PBO:0078485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 5-5","termid":"PBO:0078485"}


id: GO:0061042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels and contribute to the series of events that restore integrity to damaged vasculature.","definition_xrefs":["GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angiogenesis involved in wound healing","termid":"GO:0060055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular wound healing","termid":"GO:0061042"}


id: GO:0002461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction dependent upon an immune response, typically a response by a mature T or B cell in the periphery resulting tolerance towards an antigen via induction of anergy, cellular deletion, or regulatory T cell activation.","definition_xrefs":["ISBN:0781735149","GO_REF:0000022","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"},{"relation_name":"is_a","term_name":"tolerance induction","termid":"GO:0002507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tolerance induction dependent upon immune response","synonyms":[{"name":"immune response-dependent tolerance induction","type":"exact"}],"termid":"GO:0002461"}


id: GO:0046491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-methylmalonyl-CoA, the L-enantiomer of 2-carboxypropanoyl-CoA. S-methylmalonyl-CoA is an intermediate in the beta oxidation of odd-numbered fatty acids in animals.","definition_xrefs":["ISBN:0198506732","GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA metabolic process","termid":"GO:0006637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"L-methylmalonyl-CoA metabolic process","synonyms":[{"name":"L-methylmalonyl-CoA metabolism","type":"exact"}],"termid":"GO:0046491"}


id: GO:0010280
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-D-glucose + NADPH + H+ = UDP-L-rhamnose + NADP+ + H2O.","definition_xrefs":["MetaCyc:RXN-5482","PMID:14701918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity","termid":"GO:0016740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"UDP-L-rhamnose synthase activity","synonyms":[{"name":"UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase-4-reductase activity","type":"narrow"}],"termid":"GO:0010280"}


id: PBO:0031357
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_caffeine","termid":"PBO:0031357"}


id: PBO:0030501
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_checkpoint","termid":"PBO:0030501"}


id: PBO:0057895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3198-2","termid":"PBO:0057895"}


id: PBO:0078038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 28","termid":"PBO:0078038"}


id: PBO:0113175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JmjC domain family histone demethylase; promotes global demethylation of H3K4 and represses noncoding intergenic transcription during sporulation; removes methyl groups added by Set1p; phosphorylation by Tpk2p during glycolysis inhibits activity, nuclear localization, chromatin binding and promotes Not4p Ub-mediated degradation; negatively regulated by H3K14 acetylation; regulates sporulation timing by extending period of active transcription; regulates rDNA silencing; human homolog is JARID1C","termid":"PBO:0113175"}


id: GO:0030910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a thickening of the neural ectoderm in the head region of the vertebrate embryo which develops into the olfactory region of the nasal cavity.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal placode formation","termid":"GO:0060788"},{"relation_name":"part_of","term_name":"nose development","termid":"GO:0043584"},{"relation_name":"part_of","term_name":"olfactory placode morphogenesis","termid":"GO:0071699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory placode formation","termid":"GO:0030910"}


id: GO:0071372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a follicle-stimulating hormone stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to follicle-stimulating hormone","termid":"GO:0032354"},{"relation_name":"is_a","term_name":"cellular response to gonadotropin stimulus","termid":"GO:0071371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to follicle-stimulating hormone stimulus","synonyms":[{"name":"cellular response to FSH stimulus","type":"exact"},{"name":"cellular response to follicle stimulating hormone stimulus","type":"exact"}],"termid":"GO:0071372"}


id: PBO:0054262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1647","termid":"PBO:0054262"}


id: FYPO:0007446
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which autophagic degradation of the endoplasmic reticulum occurs to a lower extent than normal during a cellular response to endoplasmic reticulum stress.","definition_xrefs":["PMID:32735772","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased reticulophagy during vegetative growth","termid":"FYPO:0008197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased reticulophagy during cellular response to endoplasmic reticulum stress","synonyms":[{"name":"decreased ER autophagy during cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"decreased ER degradation","type":"related"},{"name":"decreased ER-phagy during cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"decreased endoplasmic reticulum autophagy during cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"decreased reticulophagy during cellular response to ER stress","type":"exact"},{"name":"decreased reticulophagy during cellular response to endoplasmic reticulum stress during mitotic cell cycle","type":"related"},{"name":"decreased reticulophagy during cellular response to endoplasmic reticulum stress during vegetative growth","type":"exact"},{"name":"reduced reticulophagy during cellular response to endoplasmic reticulum stress","type":"exact"}],"termid":"FYPO:0007446"}


id: PBO:0058569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6511a-1","termid":"PBO:0058569"}


id: GO:0008332
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a low voltage-gated channel. A low voltage-gated channel is a channel whose open state is dependent on low voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","PMID:16382099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity","termid":"GO:0005245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"low voltage-gated calcium channel activity","synonyms":[{"name":"T-type calcium channel","type":"related"},{"name":"low voltage gated calcium channel activity","type":"exact"},{"name":"low voltage-dependent calcium channel activity","type":"exact"}],"termid":"GO:0008332"}


id: GO:0047035
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: testosterone + NAD+ = androst-4-ene-3,17-dione + NADH.","definition_xrefs":["RHEA:14929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testosterone dehydrogenase [NAD(P)+] activity","termid":"GO:0030283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"testosterone dehydrogenase (NAD+) activity","secondary_identifiers":["GO:0050327","EC:1.1.1.239","KEGG_REACTION:R01836","MetaCyc:TESTOSTERONE-17-BETA-DEHYDROGENASE-RXN","Wikipedia:3alpha(17beta)-hydroxysteroid_dehydrogenase_(NAD+)"],"synonyms":[{"name":"17-beta-HSD activity","type":"broad"},{"name":"17-ketoreductase activity","type":"broad"},{"name":"17beta-HSD","type":"related"},{"name":"17beta-hydroxysteroid:NAD+ 17-oxidoreductase activity","type":"related"},{"name":"3-alpha(17-beta)-hydroxysteroid dehydrogenase (NAD+) activity","type":"broad"},{"name":"3alpha(17beta)-HSD","type":"related"},{"name":"3alpha(17beta)-hydroxysteroid dehydrogenase (NAD+)","type":"broad"},{"name":"3alpha(or 17beta)-hydroxysteroid:NAD+ oxidoreductase activity","type":"broad"},{"name":"3alpha,17beta-hydroxy steroid dehydrogenase activity","type":"broad"},{"name":"testosterone 17-beta-dehydrogenase (NAD+) activity","type":"exact"},{"name":"testosterone 17b-dehydrogenase activity","type":"exact"},{"name":"testosterone 17beta-dehydrogenase activity","type":"related"}],"termid":"GO:0047035"}


id: PBO:0067818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 120","termid":"PBO:0067818"}


id: PR:Q9UTR5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rgf2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTR5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho1 guanine nucleotide exchange factor 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.06","synonyms":[{"name":"Spom972h-rgf2","type":"exact"}],"termid":"PR:Q9UTR5"}


id: GO:0110013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of aggregation involved in sorocarp development. Aggregation involved in sorocarp development is the process whose specific outcome is the progression of the aggregate over time, from its formation to the point when a slug is formed. Aggregate development begins in response to starvation and continues by the chemoattractant-mediated movement of cells toward each other. The aggregate is a multicellular structure that gives rise to the slug.","definition_xrefs":["GOC:rjd","PMID:28257811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to nutrient levels","termid":"GO:0032109"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of aggregation involved in sorocarp development","termid":"GO:0060176"},{"relation_name":"positively_regulates","term_name":"aggregation involved in sorocarp development","termid":"GO:0031152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of aggregation involved in sorocarp development","termid":"GO:0110013"}


id: PBO:0075378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 15","termid":"PBO:0075378"}


id: PBO:0026793
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-septated_spheroid_vegetative_cell","termid":"PBO:0026793"}


id: GO:0102734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: castasterone + O2 + reduced [NADPH--hemoprotein reductase] = brassinolide + H+ + H2O + oxidized [NADPH--hemoprotein reductase]. Broad specificity for several brassinosteroids, including castasterone, teasterone, and typhasterol.","definition_xrefs":["EC:1.14.14.180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"brassinolide synthase activity","secondary_identifiers":["MetaCyc:RXN-720"],"termid":"GO:0102734"}


id: PBO:0111895
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Atf-CREB subfamily","termid":"PBO:0111895"}


id: GO:0106425
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-dopa + O2 + H2O + H+ = 3,4-dihydroxyphenylacetaldehyde + CO2 + NH(4)+ + H2O2.","definition_xrefs":["RHEA:55524","PMID:21283636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3,4-dihydroxyphenylacetaldehyde synthase activity","secondary_identifiers":["EC:4.1.1.107"],"synonyms":[{"name":"DHPAA synthase","type":"exact"}],"termid":"GO:0106425"}


id: PBO:0078160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 38-1","termid":"PBO:0078160"}


id: PBO:0079098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 11-1","termid":"PBO:0079098"}


id: GO:0140773
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N6-tetradecanoyl-L-lysyl-[protein] + NAD+ + H2O = tetradecanoyl-ADP-D-ribose + L-lysyl-[protein] + nicotinamide.","definition_xrefs":["PMID:23552949","RHEA:70567"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"NAD-dependent protein demyristoylase activity","termid":"GO:0140773"}


id: PBO:0031765
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_glycerol/ethanol_carbon_source","termid":"PBO:0031765"}


id: PBO:0039531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 34B","termid":"PBO:0039531"}


id: GO:0045805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of eclosion.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of eclosion","termid":"GO:0007563"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"eclosion","termid":"GO:0007562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of eclosion","synonyms":[{"name":"activation of eclosion","type":"narrow"},{"name":"stimulation of eclosion","type":"narrow"},{"name":"up regulation of eclosion","type":"exact"},{"name":"up-regulation of eclosion","type":"exact"},{"name":"upregulation of eclosion","type":"exact"}],"termid":"GO:0045805"}


id: MOD:01950
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamine residue to L-isoglutamyl histamine.","definition_xrefs":["PubMed:23022564","RESID:AA0596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamine residue","termid":"MOD:00907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-isoglutamyl histamine","synonyms":[{"name":"(2S)-2-amino-5-([2-(1H-imidazol-5-yl)ethyl]amino)-5-oxopentanoic acid","type":"exact"},{"name":"(gamma-glutamyl)histamine","type":"exact"},{"name":"L-isoglutamyl histamine","type":"exact"}],"termid":"MOD:01950"}


id: PBO:0075226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 3","termid":"PBO:0075226"}


id: PR:Q9UT02
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec71 gene.","definition_xrefs":["UniProtKB:Q9UT02","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sec71 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.01c","synonyms":[{"name":"Spom972h-sec71","type":"exact"}],"termid":"PR:Q9UT02"}


id: PBO:0079365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha 8","termid":"PBO:0079365"}


id: PBO:0051837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunity related GTPase M","termid":"PBO:0051837"}


id: GO:0097125
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin B1 and cyclin-dependent kinase 1 (CDK1). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["GOC:so","PMID:15935619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cyclin B1-CDK1 complex","termid":"GO:0097125"}


id: PBO:0072347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 33","termid":"PBO:0072347"}


id: PBO:0003249
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.2.1.12","termid":"PBO:0003249"}


id: GO:0050229
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: medicarpin + NADP+ = vestitone + NADPH.","definition_xrefs":["EC:1.1.1.246","MetaCyc:PTEROCARPIN-SYNTHASE-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete pterocarpin synthase activity (obsolete GO:0050229)","synonyms":[{"name":"medicarpin:NADP+ 2'-oxidoreductase activity","type":"related"},{"name":"pterocarpan synthase activity","type":"related"}],"termid":"GO:0050229"}


id: PBO:0075607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPON1 antisense RNA 1","termid":"PBO:0075607"}


id: PBO:0058618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6750","termid":"PBO:0058618"}


id: GO:2000655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to testosterone stimulus.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of cellular response to testosterone stimulus","termid":"GO:2000654"},{"relation_name":"negatively_regulates","term_name":"cellular response to testosterone stimulus","termid":"GO:0071394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to testosterone stimulus","termid":"GO:2000655"}


id: GO:0090619
data:
  {"annotated_genes":["SJAG_01464","SJAG_02241","SJAG_03915","SJAG_01613","SJAG_04745","SJAG_05196","SJAG_02320","SJAG_02368","SJAG_01805","SJAG_01546"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87337,89843,89917,90818,92827,95268,95957,98873,103143,114892],"is_not":false,"summary":null,"term":"GO:0090619"}]},"cv_name":"cellular_component","definition":"Either of the ends of a meiotic spindle, a spindle that forms as part of meiosis, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules.","definition_xrefs":["PMID:18250200","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole","termid":"GO:0000922"},{"relation_name":"part_of","term_name":"meiotic spindle","termid":"GO:0072687"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01464":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01805":null,"SJAG_02241":null,"SJAG_02320":null,"SJAG_02368":null,"SJAG_03915":null,"SJAG_04745":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"meiotic spindle pole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090619","terms_by_termid":{"GO:0090619":null}}


id: PBO:0083955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATA zinc finger protein; negatively regulates nitrogen catabolic gene expression by competing with Gat1p for GATA site binding; function requires a repressive carbon source; dimerizes with Dal80p and binds to Tor1p; GZF3 has a paralog, DAL80, that arose from the whole genome duplication","termid":"PBO:0083955"}


id: PBO:0030526
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_chromatin","termid":"PBO:0030526"}


id: PBO:0005257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation release factor eRF1 family protein (predicted)","termid":"PBO:0005257"}


id: PBO:0085519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S21, no bacterial homolog; RPS21A has a paralog, RPS21B, that arose from the whole genome duplication","termid":"PBO:0085519"}


id: PBO:0040823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bridging integrator 2 pseudogene 1","termid":"PBO:0040823"}


id: PBO:0048249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 12J","termid":"PBO:0048249"}


id: PBO:0030721
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_actinomycin_D","termid":"PBO:0030721"}


id: PBO:0080720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WSC domain containing 2","termid":"PBO:0080720"}


id: PR:P0CS85
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBCPT2R1.03 gene.","definition_xrefs":["UniProtKB:P0CS85","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein CPT2R1.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBCPT2R1.03","synonyms":[{"name":"Spom972h-SPBCPT2R1.03","type":"exact"}],"termid":"PR:P0CS85"}


id: PBO:0027201
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_nuclear_microtubules_protruding_through_nuclear_envelope_during_interphase","termid":"PBO:0027201"}


id: PBO:0067574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 731, pseudogene","termid":"PBO:0067574"}


id: FYPO:0006884
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the mitotic spindle is thicker than normal during mitotic metaphase.","definition_xrefs":["PMID:30463883","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal bipolar mitotic spindle","termid":"FYPO:0001574"},{"relation_name":"is_a","term_name":"abnormal spindle morphology","termid":"FYPO:0003607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000120","FYPO:0000054","FYPO:0005447","FYPO:0002399","FYPO:0001985"],"is_obsolete":false,"name":"thick mitotic spindle during mitotic metaphase","synonyms":[{"name":"increased mitotic spindle thickness during mitotic metaphase","type":"exact"},{"name":"thick mitotic spindle during mitotic metaphase during vegetative growth","type":"exact"},{"name":"thick spindle during mitotic metaphase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0006884"}


id: GO:0046096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving deoxyuridine, 2-deoxyribosyluracil, one of the four major nucleosides of DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside metabolic process","termid":"GO:0046125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"deoxyuridine metabolic process","synonyms":[{"name":"deoxyuridine metabolism","type":"exact"}],"termid":"GO:0046096"}


id: PBO:0085249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Perilipin, involved in formation and stability of lipid droplets; expression pattern suggests a role in respiratory growth; computational analysis of large-scale protein-protein interaction data suggests a role in ATP/ADP exchange","termid":"PBO:0085249"}


id: GO:1904824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an anaphase-promoting complex.","definition_xrefs":["GOC:TermGenie","GO_REF:0000079","PMID:16950791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"anaphase-promoting complex assembly","synonyms":[{"name":"APC assembly","type":"broad"},{"name":"anaphase promoting complex assembly","type":"exact"},{"name":"anaphase promoting complex formation","type":"exact"},{"name":"anaphase-promoting complex formation","type":"exact"},{"name":"cyclosome assembly","type":"exact"},{"name":"cyclosome formation","type":"exact"}],"termid":"GO:1904824"}


id: GO:0034187
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to apolipoprotein E.","definition_xrefs":["GOC:rl","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete apolipoprotein E binding (obsolete GO:0034187)","synonyms":[{"name":"apolipoprotein E binding","type":"exact"}],"termid":"GO:0034187"}


id: GO:0042126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nitrates, inorganic or organic salts and esters of nitric acid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxoacid metabolic process","termid":"GO:0043436"},{"relation_name":"is_a","term_name":"reactive nitrogen species metabolic process","termid":"GO:2001057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"nitrate metabolic process","synonyms":[{"name":"nitrate metabolism","type":"exact"}],"termid":"GO:0042126"}


id: PBO:0067014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 23, pseudogene","termid":"PBO:0067014"}


id: PBO:0055706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lectin, mannose binding 1 like","termid":"PBO:0055706"}


id: PBO:0000843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCC domain protein Ats1 (predicted)","termid":"PBO:0000843"}


id: GO:0010176
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: homogentisate + phytyl diphosphate + H+ = 2-methyl-6-phytyl-1,4-benzoquinone + CO2 + diphosphate. 2-methyl-6-phytyl-1,4-benzoquinone is also known as 2-methyl-6-phytylplastoquinol.","definition_xrefs":["MetaCyc:RXN-2541","PMID:14512521"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homogentisate prenyltransferase activity","termid":"GO:0010354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016765","GO:0003674"],"is_obsolete":false,"name":"homogentisate phytyltransferase activity","secondary_identifiers":["EC:2.5.1.115","RHEA:37975","KEGG_REACTION:R07500"],"termid":"GO:0010176"}


id: PR:O94598
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component sec5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.10c","synonyms":[{"name":"Spom972h-sec5","type":"exact"}],"termid":"PR:O94598"}


id: GO:0033814
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3alpha,7alpha,12alpha-trihydroxy-5beta-cholanoyl-CoA + propanoyl-CoA = CoA + 3alpha,7alpha,12alpha-trihydroxy-24-oxo-5beta-cholestanoyl-CoA.","definition_xrefs":["EC:2.3.1.176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-acyltransferase activity","termid":"GO:0016408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"propanoyl-CoA C-acyltransferase activity","secondary_identifiers":["RHEA:16865","MetaCyc:2.3.1.176-RXN"],"synonyms":[{"name":"3alpha,7alpha,12alpha-trihydroxy-5beta-cholanoyl-CoA:propanoyl-CoA C-acyltransferase activity","type":"related"},{"name":"PTE-2","type":"related"},{"name":"SCP-X","type":"related"},{"name":"SCPchi","type":"related"},{"name":"peroxisomal thiolase 2 activity","type":"narrow"},{"name":"sterol carrier protein-X","type":"related"},{"name":"sterol carrier protein-chi","type":"related"}],"termid":"GO:0033814"}


id: PBO:0069408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 668, pseudogene","termid":"PBO:0069408"}


id: GO:0043997
data:
  {"annotated_genes":["SJAG_00676"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84499],"is_not":false,"summary":null,"term":"GO:0043997"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H4 L-lysine (position 12) = CoA + histone H4 N6-acetyl-L-lysine (position 12).","definition_xrefs":["PMID:19056256","PMID:18552846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4 acetyltransferase activity","termid":"GO:0010485"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0034212","GO:0003824","GO:0140096","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"histone H4K12 acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone H4-K12 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H4-K12 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H4-K12 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H4-K12 specific)","type":"exact"}],"termid":"GO:0043997","terms_by_termid":{"GO:0043997":null}}


id: GO:0070075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of the aqueous layer of the tear film from the lacrimal glands. Tears are the liquid product of a process of lacrimation to clean and lubricate the eyes. Tear fluid contains water, mucin, lipids, lysozyme, lactoferrin, lipocalin, lacritin, immunoglobulins, glucose, urea, sodium, and potassium.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"body fluid secretion","termid":"GO:0007589"},{"relation_name":"is_a","term_name":"secretion by tissue","termid":"GO:0032941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"tear secretion","termid":"GO:0070075"}


id: GO:0007455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures derived from the eye-antennal disc are generated and organized. This includes the transformation of an eye-antennal imaginal disc from a monolayered epithelium in the larvae of holometabolous insects into recognizable adult structures including the eye, antenna, head capsule and maxillary palps.","definition_xrefs":["ISBN:0879694238","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc morphogenesis","termid":"GO:0007560"},{"relation_name":"part_of","term_name":"eye-antennal disc development","termid":"GO:0035214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye-antennal disc morphogenesis","synonyms":[{"name":"eye-antennal disc metamorphosis","type":"exact"}],"termid":"GO:0007455"}


id: PR:P36595
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerases I, II, and III subunit RPABC2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10773:SF8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerases I, II, and III subunit RPABC2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1020.04c","secondary_identifiers":["UniProtKB:P36595"],"synonyms":[{"name":"DNA-directed RNA polymerases I, II, and III 15 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerases I, II, and III subunit ABC2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RPC16 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPCC1020.04c","type":"related"},{"name":"Spom972h-POLR2F","type":"exact"},{"name":"rpo15","type":"related"}],"termid":"PR:P36595"}


id: GO:0006897
data:
  {"annotated_genes":["SJAG_02228","SJAG_03581","SJAG_02075","SJAG_00907","SJAG_03137","SJAG_00803","SJAG_04479","SJAG_03086","SJAG_01964","SJAG_03987","SJAG_03631","SJAG_00800","SJAG_00032","SJAG_03010","SJAG_01206","SJAG_04644","SJAG_03044","SJAG_03596","SJAG_00970","SJAG_01748","SJAG_05011","SJAG_02848","SJAG_03088","SJAG_01722","SJAG_02511","SJAG_02245","SJAG_02384","SJAG_03404","SJAG_04554","SJAG_04466","SJAG_03643","SJAG_01981","SJAG_03504","SJAG_00700","SJAG_03718","SJAG_04509","SJAG_01686","SJAG_04100","SJAG_02104","SJAG_00355","SJAG_00114","SJAG_00152","SJAG_04001","SJAG_04517","SJAG_00521","SJAG_04886","SJAG_03146","SJAG_02572","SJAG_05209","SJAG_04052","SJAG_00402","SJAG_03268","SJAG_01268","SJAG_04724","SJAG_04051","SJAG_05296","SJAG_02857","SJAG_04931","SJAG_01732","SJAG_02177","SJAG_03145","SJAG_02789","SJAG_04343","SJAG_01384","SJAG_03119","SJAG_00845","SJAG_01258","SJAG_00514","SJAG_05198","SJAG_01017","SJAG_03465","SJAG_01379","SJAG_00137","SJAG_02626","SJAG_02166","SJAG_03250","SJAG_02805","SJAG_02707","SJAG_00104","SJAG_04465","SJAG_04457","SJAG_00185","SJAG_02282","SJAG_01373","SJAG_00546","SJAG_01030","SJAG_03072","SJAG_01167","SJAG_00649","SJAG_02684","SJAG_04666","SJAG_02320","SJAG_04050"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83707,83963,84194,84222,85894,86735,86806,87551,89936,90079,90105,90302,90853,92974,93653,93982,94896,94968,95382,95530,95745,95773,95923,96016,97504,97775,98182,98574,98825,99129,99320,99377,100665,101192,101209,101960,102901,102939,103214,103609,104256,104794,105028,105120,106235,106317,107558,107931,108227,108250,110947,112264,112291,113596,114217,114559,114895],"is_not":false,"summary":null,"term":"GO:0006897"},{"annotations":[86360,88632,102067,106747,107718,114934,92335,107656,88254,90950,87591,101761,92354,98802,104389,107737,113595,104112,108372,108971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072583"},{"annotations":[84062],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120207"},{"annotations":[90638],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045806"},{"annotations":[99765],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0045807"},{"annotations":[72088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031623"},{"annotations":[107729,114917,107078],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000369"},{"annotations":[85939,76232,87017,98995,77226,88755,109299,88472,109427],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0030100"},{"annotations":[114927,113598,92355,108373,104113,107084,88255,101762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070086"}]},"cv_name":"biological_process","definition":"A vesicle-mediated transport process in which cells take up external materials or membrane constituents by the invagination of a part of the plasma membrane to form a new membrane-bounded vesicle.","definition_xrefs":["Wikipedia:Endocytosis","GOC:mah","ISBN:0198506732","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"},{"relation_name":"is_a","term_name":"import into 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import into cell","type":"exact"},{"name":"nonselective vesicle endocytosis","type":"related"},{"name":"plasma membrane invagination","type":"narrow"},{"name":"vesicle endocytosis","type":"exact"}],"termid":"GO:0006897","terms_by_termid":{"GO:0006897":null,"GO:0030100":null,"GO:0031623":null,"GO:0045806":null,"GO:0045807":null,"GO:0070086":null,"GO:0072583":null,"GO:0120207":null,"GO:2000369":null}}


id: PBO:0052955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KxDL motif containing 1","termid":"PBO:0052955"}


id: PBO:0083073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dimeric hypoxanthine-guanine phosphoribosyltransferase; catalyzes the transfer of the phosphoribosyl portion of 5-phosphoribosyl-alpha-1-pyrophosphate to a purine base (either guanine or hypoxanthine) to form pyrophosphate and a purine nucleotide (either guanosine monophosphate or inosine monophosphate); mutations in the human homolog HPRT1 can cause Lesch-Nyhan syndrome and Kelley-Seegmiller syndrome","termid":"PBO:0083073"}


id: GO:0008513
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of organic cations from one side of a membrane to the other, up the solute's concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"secondary active organic cation transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-549241","GO:0015354"],"synonyms":[{"name":"organic cation porter activity","type":"related"},{"name":"polyspecific organic cation transmembrane transporter activity","type":"narrow"}],"termid":"GO:0008513"}


id: PBO:0072473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 2","termid":"PBO:0072473"}


id: FYPO:0000782
data:
  {"alleles_by_uniquename":{"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003657"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein is observed in a particular location where it is not normally found.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein","termid":"FYPO:0003452"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"},{"relation_name":"output_of","term_name":"abnormal protein localization to nucleus during vegetative growth","termid":"FYPO:0001129"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null},"genotype_count":1,"genotypes_by_uniquename":{"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"mislocalized protein during vegetative growth","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01745"],"single_locus_genotype_uniquenames":["lem2delta"],"synonyms":[{"name":"mislocalised protein during vegetative growth","type":"exact"},{"name":"mislocalized protein during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000782","terms_by_termid":{"FYECO:0000137":null,"FYPO:0003657":null,"FYPO_EXT:0000001":null}}


id: GO:0070926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the activity of an ATP:ADP antiporter.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transporter activity","termid":"GO:0022898"},{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound transport","termid":"GO:0032239"},{"relation_name":"is_a","term_name":"regulation of monoatomic anion transmembrane transport","termid":"GO:1903959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of ATP:ADP antiporter activity","termid":"GO:0070926"}


id: GO:0007473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the proximal/distal axis of the wing disc, a precursor to the adult wing.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal/distal pattern formation, imaginal disc","termid":"GO:0007449"},{"relation_name":"is_a","term_name":"wing disc pattern formation","termid":"GO:0035222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wing disc proximal/distal pattern formation","termid":"GO:0007473"}


id: PBO:0070896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 4","termid":"PBO:0070896"}


id: GO:0006691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosanoid metabolic process","termid":"GO:0006690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"leukotriene metabolic process","synonyms":[{"name":"leukotriene metabolism","type":"exact"}],"termid":"GO:0006691"}


id: PBO:0047413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and WD repeat domain containing 4 pseudogene 1","termid":"PBO:0047413"}


id: PBO:0055682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase family member K","termid":"PBO:0055682"}


id: GO:0090227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the red or far-red signaling pathway, the series of molecular signals initiated upon sensing by photoreceptor molecules of red light or far red light.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of response to red or far red light","termid":"GO:2000030"},{"relation_name":"regulates","term_name":"red or far-red light signaling pathway","termid":"GO:0010017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of red or far-red light signaling pathway","synonyms":[{"name":"regulation of phytochrome signaling pathway","type":"exact"},{"name":"regulation of red or far-red light signalling pathway","type":"exact"}],"termid":"GO:0090227"}


id: PBO:0078388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 1-3","termid":"PBO:0078388"}


id: GO:1900753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a doxorubicin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:TermGenie","PMID:9651400","PMID:15090538","PMID:19651502","PMID:12057006","PMID:19063901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"glycoside transport","termid":"GO:1901656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"doxorubicin transport","synonyms":[{"name":"(1S,3S)-3,5,12-trihydroxy-3-(hydroxyacetyl)-10-methoxy-6,11-dioxo-1,2,3,4,6,11-hexahydrotetracen-1-yl 3-amino-2,3,6-trideoxy-alpha-L-lyxo-hexopyranoside transport","type":"exact"},{"name":"(1S,3S)-3-glycoloyl-3,5,12-trihydroxy-10-methoxy-6,11-dioxo-1,2,3,4,6,11-hexahydrotetracen-1-yl 3-amino-2,3,6-trideoxy-alpha-L-lyxo-hexopyranoside transport","type":"related"},{"name":"(8S-cis)-10-((3-amino-2,3,6-trideoxy-alpha-L-lyxo-hexopyranosyl)oxy)-7,8,9,10-tetrahydro-6,8,11-trihydroxy-8-(hydroxyacetyl)-1-methoxy-5,12-naphthacenedione transport","type":"related"},{"name":"14-hydroxydaunomycin transport","type":"related"},{"name":"14-hydroxydaunorubicine transport","type":"related"},{"name":"Adriamycin transport","type":"related"},{"name":"doxorubicine transport","type":"related"},{"name":"doxorubicinum transport","type":"related"}],"termid":"GO:1900753"}


id: PBO:0062101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily B member 1","termid":"PBO:0062101"}


id: GO:0050287
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-sorbose + NADP+ = 5-dehydro-D-fructose + H+ + NADPH.","definition_xrefs":["RHEA:15001","EC:1.1.1.123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"sorbose 5-dehydrogenase (NADP+) activity","secondary_identifiers":["KEGG_REACTION:R01694","MetaCyc:SORBOSE-5-DEHYDROGENASE-NADP+-RXN"],"synonyms":[{"name":"5-keto-D-fructose reductase activity","type":"related"},{"name":"5-ketofructose reductase activity","type":"related"},{"name":"L-sorbose:NADP+ 5-oxidoreductase activity","type":"related"},{"name":"reduced nicotinamide adenine dinucleotide phosphate-linked reductase activity","type":"related"},{"name":"sorbose (nicotinamide adenine dinucleotide phosphate) dehydrogenase activity","type":"related"}],"termid":"GO:0050287"}


id: PBO:0058348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4721","termid":"PBO:0058348"}


id: PBO:0088721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose-1-phosphate guanyltransferase","termid":"PBO:0088721"}


id: PBO:0046560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 2","termid":"PBO:0046560"}


id: PBO:0088211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Small toxic protein; overexpression inhibits ergosterol biosynthesis; not required for normal growth, not conserved in related yeast species including S. paradoxus","termid":"PBO:0088211"}


id: GO:0018748
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: iprodione + OH- = 3,5-dichlorophenylcarboximide + N-isopropylcarbamate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete iprodione amidohydrolase activity (obsolete GO:0018748)","termid":"GO:0018748"}


id: GO:0003207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a cardiac chamber from unspecified parts. A cardiac chamber is an enclosed cavity within the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"cardiac chamber morphogenesis","termid":"GO:0003206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac chamber formation","synonyms":[{"name":"heart chamber formation","type":"exact"}],"termid":"GO:0003207"}


id: SO:0000589
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding a signal recognition particle RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nc_primary_transcript","termid":"SO:0000483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP_RNA_primary_transcript","synonyms":[{"name":"SRP RNA primary transcript","type":"exact"}],"termid":"SO:0000589"}


id: PR:Q9UTH1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA guanosine-2'-O-methyltransferase TRM13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12998:SF0","PRO:DNx","OMA:SCHPO01162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA:m(4)X modification enzyme TRM13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.03c","secondary_identifiers":["UniProtKB:Q9UTH1"],"synonyms":[{"name":"Spom972h-TRMT13","type":"exact"},{"name":"tRNA methylase 13 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTH1"}


id: GO:0046945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The carbamylation of the N-terminal alanine of proteins to form the derivative N-carbamoyl-L-alanine.","definition_xrefs":["RESID:AA0343"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-alanine N-carbamoylation (obsolete GO:0046945)","synonyms":[{"name":"N-terminal peptidyl-alanine N-carbamylation","type":"related"}],"termid":"GO:0046945"}


id: PBO:0082765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the SMC5-SMC6 complex; this complex plays a key role in the removal of X-shaped DNA structures that arise between sister chromatids during DNA replication and repair","termid":"PBO:0082765"}


id: PBO:0046545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group FRD member 2","termid":"PBO:0046545"}


id: PBO:0005362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex subunit Elp2 (predicted)","termid":"PBO:0005362"}


id: GO:0033274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin B2 stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to vitamin B2","synonyms":[{"name":"response to riboflavin","type":"exact"}],"termid":"GO:0033274"}


id: GO:0044641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of complement activation via the lectin pathway in the bitten/stung organism.","definition_xrefs":["GOC:jl","PMID:20837040","GOC:fj"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in positive regulation of complement activation, lectin pathway in another organism (obsolete GO:0044641)","synonyms":[{"name":"envenomation resulting in positive regulation of complement activation, lectin pathway in other organism","type":"exact"}],"termid":"GO:0044641"}


id: GO:0016823
data:
  {"annotated_genes":["SJAG_00493"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0018773"},{"annotations":[102828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047621"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any acid carbon-carbon bond in a ketonic substance, a substance containing a keto (C=O) group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds","termid":"GO:0016822"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00493":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.7.1.-"],"termid":"GO:0016823","terms_by_termid":{"GO:0018773":null,"GO:0047621":null}}


id: PBO:0091268
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homomeric(1)","termid":"PBO:0091268"}


id: GO:0048567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the ectodermal digestive tract are generated and organized. The ectodermal digestive tract includes those portions of the digestive tract that are derived from ectoderm.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal digestive tract development","termid":"GO:0007439"},{"relation_name":"part_of","term_name":"digestive tract morphogenesis","termid":"GO:0048546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ectodermal digestive tract morphogenesis","synonyms":[{"name":"ectodermal gut morphogenesis","type":"related"}],"termid":"GO:0048567"}


id: PBO:0031026
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_concentration_of_M-factor_in_growth_medium","termid":"PBO:0031026"}


id: PBO:0069085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 332, pseudogene","termid":"PBO:0069085"}


id: GO:0071595
data:
  {"annotated_genes":["SJAG_01906","SJAG_03940"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[105778,108803],"is_not":false,"summary":null,"term":"GO:0071595"}]},"cv_name":"cellular_component","definition":"A protein serine/threonine phosphatase complex that is involved in nuclear envelope organization, and contains proteins known in budding yeast as Nem1p and Spo7p.","definition_xrefs":["GOC:mah","PMID:9822591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase complex","termid":"GO:0008287"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"nuclear outer membrane-endoplasmic reticulum membrane network","termid":"GO:0042175"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01906":null,"SJAG_03940":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Nem1-Spo7 phosphatase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071595","terms_by_termid":{"GO:0071595":null}}


id: PBO:0070143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 57 pseudogene","termid":"PBO:0070143"}


id: MOD:01073
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a 2-chlorobenzyloxycarbonyl group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-chlorobenzyloxycarbonyl modified residue","synonyms":[{"name":"Clz","type":"exact"}],"termid":"MOD:01073"}


id: PBO:0071960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase A1","termid":"PBO:0071960"}


id: PBO:0058048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4269","termid":"PBO:0058048"}


id: PBO:0001377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xanthine phosphoribosyltransferase (predicted)","termid":"PBO:0001377"}


id: GO:0106400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A mechanism of homologous recombination and DNA repair in which transcript RNA is used as a template for DSB repair.","definition_xrefs":["PMID:25186730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-strand break repair via homologous recombination","termid":"GO:0000724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"double-strand break repair via transcription-associated homologous recombination","termid":"GO:0106400"}


id: GO:0032752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-3 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-3 production","termid":"GO:0032672"},{"relation_name":"positively_regulates","term_name":"interleukin-3 production","termid":"GO:0032632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-3 production","secondary_identifiers":["GO:0045401"],"synonyms":[{"name":"activation of interleukin-3 production","type":"narrow"},{"name":"positive regulation of IL-3 production","type":"exact"},{"name":"positive regulation of interleukin-3 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-3 production","type":"narrow"},{"name":"up regulation of interleukin-3 production","type":"exact"},{"name":"up-regulation of interleukin-3 production","type":"exact"},{"name":"upregulation of interleukin-3 production","type":"exact"}],"termid":"GO:0032752"}


id: PBO:0041137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"betacellulin","termid":"PBO:0041137"}


id: PBO:0049858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECW1 intronic transcript 1","termid":"PBO:0049858"}


id: PBO:0042570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDKN2A interacting protein","termid":"PBO:0042570"}


id: FYPO:0000261
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. Multiple different phenotypes due to a single mutation.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete pleiotropic effects (obsolete FYPO:0000261)","synonyms":[{"name":"pleiotropic effects during vegetative growth","type":"exact"}],"termid":"FYPO:0000261"}


id: PBO:0005900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Valine, mitochondrial","termid":"PBO:0005900"}


id: GO:0035000
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An oligosaccharyltransferase (OST) complex that contains the seven polypeptides found in OST complex I, plus heterotrimeric Sec61alpha-beta-gamma and the tetrameric TRAP complex. Of the three forms of mammalian OST complexes identified, the OSTIII complex has the strongest affinity for ribosomes.","definition_xrefs":["PMID:15835887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharyltransferase complex","termid":"GO:0008250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005789","GO:0032991","GO:0005783"],"is_obsolete":false,"name":"oligosaccharyltransferase III complex","synonyms":[{"name":"OSTCIII","type":"exact"}],"termid":"GO:0035000"}


id: PBO:0044300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 type A pseudogene 3","termid":"PBO:0044300"}


id: GO:0033858
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + N-acetyl-D-galactosamine = ADP + N-acetyl-alpha-D-galactosamine 1-phosphate.","definition_xrefs":["EC:2.7.1.157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"N-acetylgalactosamine kinase activity","secondary_identifiers":["RHEA:12617","MetaCyc:2.7.1.157-RXN"],"synonyms":[{"name":"ATP:N-acetyl-D-galactosamine 1-phosphotransferase activity","type":"related"},{"name":"GALK2","type":"related"},{"name":"GK2","type":"related"},{"name":"GalNAc kinase activity","type":"related"},{"name":"N-acetylgalactosamine (GalNAc)-1-phosphate kinase activity","type":"related"}],"termid":"GO:0033858"}


id: PBO:0061966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AF member 1 pseudogene","termid":"PBO:0061966"}


id: PBO:0059361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S17 pseudogene 7","termid":"PBO:0059361"}


id: GO:1904042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cystathionine beta-synthase activity.","definition_xrefs":["GOC:hal","GOC:TermGenie","PMID:24416422","GOC:BHF","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lyase activity","termid":"GO:0051350"},{"relation_name":"is_a","term_name":"regulation of cystathionine beta-synthase activity","termid":"GO:1904041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cystathionine beta-synthase activity","synonyms":[{"name":"down regulation of L-serine hydro-lyase (adding homocysteine)","type":"exact"},{"name":"down regulation of L-serine hydro-lyase (adding homocysteine; L-cystathionine-forming)","type":"exact"},{"name":"down regulation of beta-thionase activity","type":"exact"},{"name":"down regulation of cystathionine beta-synthase activity","type":"exact"},{"name":"down regulation of methylcysteine synthase activity","type":"exact"},{"name":"down regulation of serine sulfhydrase activity","type":"exact"},{"name":"down regulation of serine sulfhydrylase activity","type":"exact"},{"name":"down-regulation of L-serine hydro-lyase (adding homocysteine)","type":"exact"},{"name":"down-regulation of L-serine hydro-lyase (adding homocysteine; L-cystathionine-forming)","type":"exact"},{"name":"down-regulation of beta-thionase activity","type":"exact"},{"name":"down-regulation of cystathionine beta-synthase activity","type":"exact"},{"name":"down-regulation of methylcysteine synthase activity","type":"exact"},{"name":"down-regulation of serine sulfhydrase activity","type":"exact"},{"name":"down-regulation of serine sulfhydrylase activity","type":"exact"},{"name":"downregulation of L-serine hydro-lyase (adding homocysteine)","type":"exact"},{"name":"downregulation of L-serine hydro-lyase (adding homocysteine; L-cystathionine-forming)","type":"exact"},{"name":"downregulation of beta-thionase activity","type":"exact"},{"name":"downregulation of cystathionine beta-synthase activity","type":"exact"},{"name":"downregulation of methylcysteine synthase activity","type":"exact"},{"name":"downregulation of serine sulfhydrase activity","type":"exact"},{"name":"downregulation of serine sulfhydrylase activity","type":"exact"},{"name":"inhibition of L-serine hydro-lyase (adding homocysteine)","type":"narrow"},{"name":"inhibition of L-serine hydro-lyase (adding homocysteine; L-cystathionine-forming)","type":"narrow"},{"name":"inhibition of beta-thionase activity","type":"narrow"},{"name":"inhibition of cystathionine beta-synthase activity","type":"narrow"},{"name":"inhibition of methylcysteine synthase activity","type":"narrow"},{"name":"inhibition of serine sulfhydrase activity","type":"narrow"},{"name":"inhibition of serine sulfhydrylase activity","type":"narrow"},{"name":"negative regulation of L-serine hydro-lyase (adding homocysteine)","type":"exact"},{"name":"negative regulation of L-serine hydro-lyase (adding homocysteine; L-cystathionine-forming)","type":"exact"},{"name":"negative regulation of beta-thionase activity","type":"exact"},{"name":"negative regulation of methylcysteine synthase activity","type":"exact"},{"name":"negative regulation of serine sulfhydrase activity","type":"exact"},{"name":"negative regulation of serine sulfhydrylase activity","type":"exact"}],"termid":"GO:1904042"}


id: GO:0014025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a thickened region of the neurectoderm that is roughly triangular in cross section. The neural keel develops from the neural plate and develops into the neural rod. Neural keel formation occurs during primary neurulation in teleosts.","definition_xrefs":["GOC:ef","GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"neural rod formation","termid":"GO:0014023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural keel formation","termid":"GO:0014025"}


id: PBO:0077377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 119","termid":"PBO:0077377"}


id: GO:1905453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of myeloid progenitor cell differentiation.","definition_xrefs":["GOC:TermGenie","PMID:27010503","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hematopoietic progenitor cell differentiation","termid":"GO:1901532"},{"relation_name":"regulates","term_name":"myeloid progenitor cell differentiation","termid":"GO:0002318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myeloid progenitor cell differentiation","termid":"GO:1905453"}


id: SO:1000152
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An insertional duplication where a copy of the segment between the first two breaks listed is inserted at the third break; the insertion is in cytologically the same orientation as its flanking segments.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insertional_duplication","termid":"SO:1000154"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uninverted_insertional_duplication","synonyms":[{"name":"(Drosophila)eDp","type":"related"},{"name":"uninverted insertional duplication","type":"exact"}],"termid":"SO:1000152"}


id: GO:0045165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular developmental process by which a cell establishes the intrinsic character of a cell or tissue region irreversibly committing it to a particular fate.","definition_xrefs":["ISBN:0716731185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"},{"relation_name":"part_of","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell fate commitment","termid":"GO:0045165"}


id: PBO:0090494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rix1 complex WD repeat subunit Crb3","termid":"PBO:0090494"}


id: PBO:0054171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1544","termid":"PBO:0054171"}


id: FYPO:0007906
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a cell population in the vegetative growth phase of the life cycle grows at a faster rate than normal during amino acid starvation.","definition_xrefs":["PomBase:val","PMID:34805795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell population growth rate","termid":"FYPO:0000636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0002058","FYPO:0002057","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"increased cell population growth rate during amino acid starvation","synonyms":[{"name":"increased cell proliferation during amino acid starvation","type":"exact"}],"termid":"FYPO:0007906"}


id: GO:0004676
data:
  {"annotated_genes":["SJAG_02468"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113535],"is_not":false,"summary":null,"term":"GO:0004676"}]},"cv_name":"molecular_function","definition":"Phosphatidylinositol-3-phosphate-dependent catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02468":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0004672","GO:0003674","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"3-phosphoinositide-dependent protein kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-437195"],"synonyms":[{"name":"PDK activity","type":"related"},{"name":"phosphatidylinositol-3-phosphate protein kinase activity","type":"exact"}],"termid":"GO:0004676","terms_by_termid":{"GO:0004676":null}}


id: GO:0071439
data:
  {"annotated_genes":["SJAG_02282"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90947],"is_not":false,"summary":null,"term":"GO:0071439"}]},"cv_name":"cellular_component","definition":"A protein complex that consists of three clathrin heavy chains and three clathrin light chains, organized into a symmetrical three-legged structure called a triskelion. In clathrin-coated vesicles clathrin is the main component of the coat and forms a polymeric mechanical scaffold on the vesicle surface.","definition_xrefs":["PMID:16493411","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"clathrin coat","termid":"GO:0030118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02282":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"clathrin complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"clathrin triskelion","type":"exact"}],"termid":"GO:0071439","terms_by_termid":{"GO:0071439":null}}


id: PBO:0042024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 82","termid":"PBO:0042024"}


id: PBO:0091630
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteomics data indicates an N-terminally extended version of this gene which would contain an upstream stop codon and a frameshift","termid":"PBO:0091630"}


id: GO:0015383
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sulfate(out) + bicarbonate(in) = sulfate(in) + bicarbonate(out).","definition_xrefs":["TC:2.A.53.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:inorganic anion antiporter activity","termid":"GO:0005452"},{"relation_name":"is_a","term_name":"secondary active sulfate transmembrane transporter activity","termid":"GO:0008271"},{"relation_name":"is_a","term_name":"bicarbonate transmembrane transporter activity","termid":"GO:0015106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"sulfate:bicarbonate antiporter activity","synonyms":[{"name":"sulfate:hydrogencarbonate antiporter activity","type":"exact"},{"name":"sulphate:bicarbonate antiporter activity","type":"exact"}],"termid":"GO:0015383"}


id: PBO:0077272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 14A","termid":"PBO:0077272"}


id: PBO:0040348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit f pseudogene 5","termid":"PBO:0040348"}


id: GO:0051165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2,5-dihydroxypyridine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic process","termid":"GO:0072524"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2,5-dihydroxypyridine metabolic process","synonyms":[{"name":"2,5-dihydroxypyridine metabolism","type":"exact"},{"name":"pyridine-2,5-diol metabolic process","type":"exact"}],"termid":"GO:0051165"}


id: GO:0098897
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding the spine apparatus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"spine apparatus","termid":"GO:0097444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"spine apparatus membrane","termid":"GO:0098897"}


id: GO:1904775
data:
  {"annotated_genes":["SJAG_01672"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85255],"is_not":false,"summary":null,"term":"GO:1904775"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ubiquinone biosynthetic process.","definition_xrefs":["PMID:8125303","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ubiquinone biosynthetic process","termid":"GO:0010795"},{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"ubiquinone biosynthetic process","termid":"GO:0006744"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01672":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006744"},{"rel_name":"positively_regulates","termid":"GO:0006744"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006744"],"is_obsolete":false,"name":"positive regulation of ubiquinone biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of coenzyme Q biosynthesis","type":"narrow"},{"name":"activation of coenzyme Q biosynthetic process","type":"narrow"},{"name":"activation of coenzyme Q10 biosynthesis","type":"narrow"},{"name":"activation of coenzyme Q10 biosynthetic process","type":"narrow"},{"name":"activation of coenzyme Q6 biosynthesis","type":"narrow"},{"name":"activation of coenzyme Q6 biosynthetic process","type":"narrow"},{"name":"activation of coenzyme Q8 biosynthesis","type":"narrow"},{"name":"activation of coenzyme Q8 biosynthetic process","type":"narrow"},{"name":"activation of coenzyme Q9 biosynthesis","type":"narrow"},{"name":"activation of coenzyme Q9 biosynthetic process","type":"narrow"},{"name":"activation of ubiquinone anabolism","type":"narrow"},{"name":"activation of ubiquinone biosynthesis","type":"narrow"},{"name":"activation of ubiquinone biosynthetic process","type":"narrow"},{"name":"activation of ubiquinone formation","type":"narrow"},{"name":"activation of ubiquinone synthesis","type":"narrow"},{"name":"positive regulation of coenzyme Q biosynthesis","type":"exact"},{"name":"positive regulation of coenzyme Q biosynthetic process","type":"exact"},{"name":"positive regulation of coenzyme Q10 biosynthesis","type":"narrow"},{"name":"positive regulation of coenzyme Q10 biosynthetic process","type":"narrow"},{"name":"positive regulation of coenzyme Q6 biosynthesis","type":"narrow"},{"name":"positive regulation of coenzyme Q6 biosynthetic process","type":"narrow"},{"name":"positive regulation of coenzyme Q8 biosynthesis","type":"narrow"},{"name":"positive regulation of coenzyme Q8 biosynthetic process","type":"narrow"},{"name":"positive regulation of coenzyme Q9 biosynthesis","type":"narrow"},{"name":"positive regulation of coenzyme Q9 biosynthetic process","type":"narrow"},{"name":"positive regulation of ubiquinone anabolism","type":"exact"},{"name":"positive regulation of ubiquinone biosynthesis","type":"exact"},{"name":"positive regulation of ubiquinone formation","type":"exact"},{"name":"positive regulation of ubiquinone synthesis","type":"exact"},{"name":"up regulation of coenzyme Q biosynthesis","type":"exact"},{"name":"up regulation of coenzyme Q biosynthetic process","type":"exact"},{"name":"up regulation of coenzyme Q10 biosynthesis","type":"narrow"},{"name":"up regulation of coenzyme Q10 biosynthetic process","type":"narrow"},{"name":"up regulation of coenzyme Q6 biosynthesis","type":"narrow"},{"name":"up regulation of coenzyme Q6 biosynthetic process","type":"narrow"},{"name":"up regulation of coenzyme Q8 biosynthesis","type":"narrow"},{"name":"up regulation of coenzyme Q8 biosynthetic process","type":"narrow"},{"name":"up regulation of coenzyme Q9 biosynthesis","type":"narrow"},{"name":"up regulation of coenzyme Q9 biosynthetic process","type":"narrow"},{"name":"up regulation of ubiquinone anabolism","type":"exact"},{"name":"up regulation of ubiquinone biosynthesis","type":"exact"},{"name":"up regulation of ubiquinone biosynthetic process","type":"exact"},{"name":"up regulation of ubiquinone formation","type":"exact"},{"name":"up regulation of ubiquinone synthesis","type":"exact"},{"name":"up-regulation of coenzyme Q biosynthesis","type":"exact"},{"name":"up-regulation of coenzyme Q biosynthetic process","type":"exact"},{"name":"up-regulation of coenzyme Q10 biosynthesis","type":"narrow"},{"name":"up-regulation of coenzyme Q10 biosynthetic process","type":"narrow"},{"name":"up-regulation of coenzyme Q6 biosynthesis","type":"narrow"},{"name":"up-regulation of coenzyme Q6 biosynthetic process","type":"narrow"},{"name":"up-regulation of coenzyme Q8 biosynthesis","type":"narrow"},{"name":"up-regulation of coenzyme Q8 biosynthetic process","type":"narrow"},{"name":"up-regulation of coenzyme Q9 biosynthesis","type":"narrow"},{"name":"up-regulation of coenzyme Q9 biosynthetic process","type":"narrow"},{"name":"up-regulation of ubiquinone anabolism","type":"exact"},{"name":"up-regulation of ubiquinone biosynthesis","type":"exact"},{"name":"up-regulation of ubiquinone biosynthetic process","type":"exact"},{"name":"up-regulation of ubiquinone formation","type":"exact"},{"name":"up-regulation of ubiquinone synthesis","type":"exact"},{"name":"upregulation of coenzyme Q biosynthesis","type":"exact"},{"name":"upregulation of coenzyme Q biosynthetic process","type":"exact"},{"name":"upregulation of coenzyme Q10 biosynthesis","type":"narrow"},{"name":"upregulation of coenzyme Q10 biosynthetic process","type":"narrow"},{"name":"upregulation of coenzyme Q6 biosynthesis","type":"narrow"},{"name":"upregulation of coenzyme Q6 biosynthetic process","type":"narrow"},{"name":"upregulation of coenzyme Q8 biosynthesis","type":"narrow"},{"name":"upregulation of coenzyme Q8 biosynthetic process","type":"narrow"},{"name":"upregulation of coenzyme Q9 biosynthesis","type":"narrow"},{"name":"upregulation of coenzyme Q9 biosynthetic process","type":"narrow"},{"name":"upregulation of ubiquinone anabolism","type":"exact"},{"name":"upregulation of ubiquinone biosynthesis","type":"exact"},{"name":"upregulation of ubiquinone biosynthetic process","type":"exact"},{"name":"upregulation of ubiquinone formation","type":"exact"},{"name":"upregulation of ubiquinone synthesis","type":"exact"}],"termid":"GO:1904775","terms_by_termid":{"GO:1904775":null}}


id: GO:0018940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving orcinol (5-methyl-1,3-benzenediol), an aromatic compound derived from the fermentation of lichen, and synthesized, probably as a fungicide, by some higher plants.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"toluene-containing compound metabolic process","termid":"GO:0072490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"orcinol metabolic process","secondary_identifiers":["MetaCyc:P342-PWY","UM-BBD_pathwayID:orc"],"synonyms":[{"name":"orcin metabolic process","type":"exact"},{"name":"orcin metabolism","type":"exact"},{"name":"orcinol metabolism","type":"exact"}],"termid":"GO:0018940"}


id: FYPO:0004003
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which replication fork processing begins later than normal. Replication fork processing is process in which a DNA replication fork that has stalled (due to DNA damage, DNA secondary structure, bound proteins, dNTP shortage, or other causes) is repaired and replication is restarted.","definition_xrefs":["PomBase:mah","GO:0031297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork processing","termid":"FYPO:0003586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000293","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"delayed onset of replication fork processing","synonyms":[{"name":"delayed onset of collapsed replication fork processing","type":"exact"},{"name":"delayed onset of recovery from replication fork arrest","type":"exact"},{"name":"delayed onset of recovery from replication fork stalling","type":"exact"},{"name":"delayed onset of replication fork processing during mitotic cell cycle","type":"related"},{"name":"delayed onset of replication fork processing during vegetative growth","type":"exact"},{"name":"delayed onset of replication fork restart","type":"related"},{"name":"delayed onset of replication restart","type":"related"},{"name":"delayed replication fork processing","type":"exact"}],"termid":"FYPO:0004003"}


id: FYPO:0003351
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one or more proteins is localized to the kinetochore of a chromosome for a longer time than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to kinetochore during vegetative growth","termid":"FYPO:0001268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of protein localization to kinetochore during vegetative growth","synonyms":[{"name":"increased duration of protein localisation to kinetochore during vegetative growth","type":"exact"},{"name":"increased duration of protein localization to kinetochore during mitotic cell cycle","type":"related"},{"name":"prolonged protein localization to kinetochore during vegetative growth","type":"exact"}],"termid":"FYPO:0003351"}


id: PBO:0082343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase, also known as reptin; member of the AAA+ and RuvB protein families, similar to Rvb1p; conserved component of multiple complexes including the INO80 complex, the Swr1 complex, and the R2TP complex (Rvb1-Rvb2-Tah1-Pih1); involved in multiple processes such as chromatin remodeling, box C/D snoRNP assembly, and RNA polymerase II assembly","termid":"PBO:0082343"}


id: PBO:0084579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YBR100W was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YBR098W","termid":"PBO:0084579"}


id: GO:1902491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sperm capacitation.","definition_xrefs":["GOC:hjd","PMID:22539676","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of sperm capacitation","termid":"GO:1902490"},{"relation_name":"is_a","term_name":"negative regulation of cell maturation","termid":"GO:1903430"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"sperm capacitation","termid":"GO:0048240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sperm capacitation","synonyms":[{"name":"down regulation of sperm activation","type":"related"},{"name":"down regulation of sperm capacitation","type":"exact"},{"name":"down-regulation of sperm activation","type":"related"},{"name":"down-regulation of sperm capacitation","type":"exact"},{"name":"downregulation of sperm activation","type":"related"},{"name":"downregulation of sperm capacitation","type":"exact"},{"name":"inhibition of sperm activation","type":"related"},{"name":"inhibition of sperm capacitation","type":"narrow"},{"name":"negative regulation of sperm activation","type":"related"}],"termid":"GO:1902491"}


id: GO:0062087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of vein smooth muscle contraction.","definition_xrefs":["PMID:8428203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vein smooth muscle contraction","termid":"GO:0062086"},{"relation_name":"is_a","term_name":"positive regulation of vascular associated smooth muscle contraction","termid":"GO:1904695"},{"relation_name":"positively_regulates","term_name":"vein smooth muscle contraction","termid":"GO:0014826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vein smooth muscle contraction","termid":"GO:0062087"}


id: PBO:0050138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 48","termid":"PBO:0050138"}


id: PBO:0084096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide exchange factor (GEF) for Rho1p and Rho2p; mutations are synthetically lethal with mutations in rom1, which also encodes a GEF; Rom2p localization to the bud surface is dependent on Ack1p; ROM2 has a paralog, ROM1, that arose from the whole genome duplication","termid":"PBO:0084096"}


id: PBO:0108524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KPRP N-terminal and LCE C-terminal like protein","termid":"PBO:0108524"}


id: PBO:0089505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA adenine glycosylase Myh1","termid":"PBO:0089505"}


id: GO:0140355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The activity of a gene product that interacts with a cargo receptor and initiates endocytosis.","definition_xrefs":["PMID:15797858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"cargo receptor ligand activity","secondary_identifiers":["Reactome:R-HSA-3000074","Reactome:R-HSA-3132759","Reactome:R-HSA-3000120"],"synonyms":[{"name":"cargo","type":"related"}],"termid":"GO:0140355"}


id: PR:Q9USL5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein pelota that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04428","PANTHER:PTHR10853:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein dom34 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18B5.06","secondary_identifiers":["UniProtKB:Q9USL5"],"synonyms":[{"name":"Spom972h-PELO","type":"exact"}],"termid":"PR:Q9USL5"}


id: PR:O43036
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpa43 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I subunit rpa43 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.07c","synonyms":[{"name":"DNA-dependent RNA polymerase 19 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase I subunit A43 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpa43","type":"exact"}],"termid":"PR:O43036"}


id: PBO:0046666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelial splicing regulatory protein 1","termid":"PBO:0046666"}


id: PBO:0049868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helicase with zinc finger","termid":"PBO:0049868"}


id: PBO:0031791
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_cell_cycle","termid":"PBO:0031791"}


id: PBO:0005546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine kinase/uracil phosphoribosyltransferase (predicted)","termid":"PBO:0005546"}


id: PR:000027578
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.1, initiator methionine removed methylated form that is recognized by the HP1-like protein Swi6 in Schizosaccharomyces pombe. Example: UniProtKB:P09988-1, 2-136, Lys-10, MOD:00663.","definition_xrefs":["PMID:11242054","PRO:DAN","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.1, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht1/Me(K9)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"PomBase_original_PRO_term_name: histone H3.1, initiator methionine removed K9-methylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht1/InitMet-/K9me","type":"exact"},{"name":"hht1/InitMet-/Me:(K10)","type":"exact"},{"name":"hht1/Me(K9)","type":"exact"}],"termid":"PR:000027578"}


id: PBO:0025426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase PP2A regulatory subunit B-55 Pab1","termid":"PBO:0025426"}


id: GO:1902913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neuroepithelial cell differentiation.","definition_xrefs":["GOC:mr","PMID:16916506","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"positively_regulates","term_name":"neuroepithelial cell differentiation","termid":"GO:0060563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuroepithelial cell differentiation","synonyms":[{"name":"activation of neuroepithelial cell differentiation","type":"narrow"},{"name":"up regulation of neuroepithelial cell differentiation","type":"exact"},{"name":"up-regulation of neuroepithelial cell differentiation","type":"exact"},{"name":"upregulation of neuroepithelial cell differentiation","type":"exact"}],"termid":"GO:1902913"}


id: PATO:0001357
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A convex 3-D shape quality inhering in a bearer by virtue of the bearer's being shaped like a cushion or has a marked convex cushion-like form.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convex 3-D shape","termid":"PATO:0002007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulvinate","termid":"PATO:0001357"}


id: PBO:0061399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natriuretic peptide C","termid":"PBO:0061399"}


id: PATO:0001858
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A functionality quality inhering in a bearer by virtue of being not completely paralysed.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement behavioral quality","termid":"PATO:0002076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partially paralysed","termid":"PATO:0001858"}


id: PBO:0089295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha mannosidase Mnl1","termid":"PBO:0089295"}


id: PBO:0085933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mRNA identified as translated by ribosome profiling data; partially overlaps the uncharacterized ORF YGR017W","termid":"PBO:0085933"}


id: PBO:0066258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMX like 1","termid":"PBO:0066258"}


id: PBO:0045085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta like canonical Notch ligand 3","termid":"PBO:0045085"}


id: PBO:0090677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arf GAP, GTPase activating protein","termid":"PBO:0090677"}


id: GO:0008406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the gonad over time, from its formation to the mature structure. The gonad is an animal organ that produces gametes; in some species it also produces hormones.","definition_xrefs":["GOC:ems","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"},{"relation_name":"part_of","term_name":"development of primary sexual characteristics","termid":"GO:0045137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gonad development","synonyms":[{"name":"gonadogenesis","type":"exact"}],"termid":"GO:0008406"}


id: PBO:0110234
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BouQueT formation protein","termid":"PBO:0110234"}


id: FYPO:0000024
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which the cell diameter is larger than normal and the cell length is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"increased cell diameter","termid":"FYPO:0006615"},{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"},{"relation_name":"is_a","term_name":"increased cell diameter","termid":"FYPO:0006615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000005","FYPO:0001320"],"is_obsolete":false,"name":"stubby vegetative cell","synonyms":[{"name":"cell morphology, stubby cells","type":"exact"},{"name":"stubby cell during mitotic cell cycle","type":"related"},{"name":"stubby cell during vegetative growth","type":"exact"},{"name":"watermelon-shaped vegetative cell","type":"exact"}],"termid":"FYPO:0000024"}


id: PBO:0056764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 15 pseudogene 3","termid":"PBO:0056764"}


id: PBO:0055888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRRC8D divergent transcript","termid":"PBO:0055888"}


id: FYPO:0002988
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ammonium. Cells stop growing (and may die) at a concentration of ammonium that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0002683","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to ammonium","synonyms":[{"name":"sensitive to NH4+","type":"related"},{"name":"hypersensitive to ammonium","type":"exact"},{"name":"sensitive to ammonium during mitotic cell cycle","type":"related"},{"name":"sensitive to ammonium during vegetative growth","type":"exact"}],"termid":"FYPO:0002988"}


id: PBO:0029467
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mannose_binding","termid":"PBO:0029467"}


id: PBO:0053316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 32","termid":"PBO:0053316"}


id: FYPO:0008277
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 1,5-bisdiphospho-1D-myo-inositol 2,3,4,6-tetrakisphosphate (1,5-IP8) measured in a cell is higher than normal.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular myo-inositol level","termid":"FYPO:0006950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular 1,5-IP8 level","termid":"FYPO:0008277"}


id: GO:0015035
data:
  {"annotated_genes":["SJAG_00489","SJAG_01647","SJAG_04539","SJAG_01199","SJAG_01417","SJAG_04399","SJAG_04046","SJAG_04632","SJAG_00288","SJAG_03653","SJAG_03992","SJAG_00614","SJAG_02827","SJAG_04953","SJAG_03414","SJAG_00196","SJAG_02489"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84685,85473,86949,88361,94555,96065,97670,98929,106887,107203,110846,113448],"is_not":false,"summary":null,"term":"GO:0015035"},{"annotations":[93203,99250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016971"},{"annotations":[102844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047134"},{"annotations":[78095,106146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004791"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds.","definition_xrefs":["PMID:7559385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disulfide oxidoreductase activity","termid":"GO:0015036"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00196":null,"SJAG_00288":null,"SJAG_00489":null,"SJAG_00614":null,"SJAG_01199":null,"SJAG_01417":null,"SJAG_01647":null,"SJAG_02489":null,"SJAG_02827":null,"SJAG_03414":null,"SJAG_03653":null,"SJAG_03992":null,"SJAG_04046":null,"SJAG_04399":null,"SJAG_04539":null,"SJAG_04632":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0015036"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0015036","GO:0003824","GO:0140096","GO:0016491"],"is_obsolete":false,"name":"protein-disulfide reductase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0015037","Reactome:R-HSA-264997","GO:0008895","Reactome:R-HSA-9817575","MetaCyc:DISULFOXRED-RXN","Reactome:R-HSA-3299753","Reactome:R-HSA-1307802"],"synonyms":[{"name":"haem lyase disulphide oxidoreductase activity","type":"narrow"},{"name":"heme lyase disulfide oxidoreductase activity","type":"narrow"},{"name":"peptide disulfide oxidoreductase activity","type":"exact"},{"name":"peptide disulphide oxidoreductase activity","type":"exact"},{"name":"protein disulfide oxidoreductase activity","type":"exact"},{"name":"protein disulfide-oxidoreductase activity","type":"exact"},{"name":"protein disulphide oxidoreductase activity","type":"exact"}],"termid":"GO:0015035","terms_by_termid":{"GO:0004791":null,"GO:0015035":null,"GO:0016971":null,"GO:0047134":null}}


id: PBO:0039979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARL5A pseudogene 2","termid":"PBO:0039979"}


id: GO:1902135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (+)-secoisolariciresinol.","definition_xrefs":["PMID:15949826","PMID:9872995","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan biosynthetic process","termid":"GO:0009807"},{"relation_name":"is_a","term_name":"diol biosynthetic process","termid":"GO:0034312"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"(+)-secoisolariciresinol metabolic process","termid":"GO:1902133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"(+)-secoisolariciresinol biosynthetic process","synonyms":[{"name":"(+)-secoisolariciresinol anabolism","type":"exact"},{"name":"(+)-secoisolariciresinol biosynthesis","type":"exact"},{"name":"(+)-secoisolariciresinol formation","type":"exact"},{"name":"(+)-secoisolariciresinol synthesis","type":"exact"}],"termid":"GO:1902135"}


id: PBO:0046972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 85 member A","termid":"PBO:0046972"}


id: PBO:0066384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REC8 meiotic recombination protein","termid":"PBO:0066384"}


id: PBO:0004811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate beta-glucosyltransferase Alg5 (predicted)","termid":"PBO:0004811"}


id: PBO:0059489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSRB3 antisense RNA 1","termid":"PBO:0059489"}


id: PATO:0000173
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000173 function (obsolete PATO:0000173)","termid":"PATO:0000173"}


id: FYPO:0007627
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype which the occurrence of an RNA catabolic process is decreased when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA catabolic process","termid":"FYPO:0003552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000294"],"is_obsolete":false,"name":"decreased RNA catabolic process during glucose starvation","synonyms":[{"name":"decreased RNA breakdown process during glucose starvation","type":"exact"},{"name":"decreased RNA catabolic process during glucose depletion","type":"exact"},{"name":"decreased RNA catabolic process during glucose deprivation","type":"exact"},{"name":"decreased RNA catabolic process during glucose limitation","type":"exact"},{"name":"decreased RNA catabolism during glucose starvation","type":"exact"},{"name":"decreased RNA degradation during glucose starvation","type":"exact"},{"name":"reduced RNA catabolic process during glucose starvation","type":"exact"}],"termid":"FYPO:0007627"}


id: GO:1904489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A negative regulation of transcription from RNA polymerase II promoter that results in regulation of reactive oxygen species metabolic process.","definition_xrefs":["GOC:kmv","PMID:25961505","GO_REF:0000063","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of reactive oxygen species metabolic process by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1904489)","synonyms":[{"name":"regulation of ROS metabolic process by down regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ROS metabolic process by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of ROS metabolic process by down-regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ROS metabolic process by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of ROS metabolic process by downregulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ROS metabolic process by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of ROS metabolic process by inhibition of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ROS metabolic process by inhibition of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of ROS metabolic process by negative regulation of gene-specific transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ROS metabolic process by negative regulation of global transcription from Pol II promoter","type":"related"},{"name":"regulation of ROS metabolic process by negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of ROS metabolic process by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of ROS metabolic process by negative regulation of transcription from RNA polymerase II promoter, global","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by down regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolic process by down-regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolic process by downregulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolic process by inhibition of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by inhibition of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolic process by negative regulation of gene-specific transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by negative regulation of global transcription from Pol II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolic process by negative regulation of transcription from RNA polymerase II promoter, global","type":"related"},{"name":"regulation of reactive oxygen species metabolism by down regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolism by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolism by down-regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolism by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolism by downregulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolism by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolism by inhibition of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolism by inhibition of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolism by negative regulation of gene-specific transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolism by negative regulation of global transcription from Pol II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolism by negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolism by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolism by negative regulation of transcription from RNA polymerase II promoter, global","type":"related"}],"termid":"GO:1904489"}


id: GO:0017064
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a fatty acid amide to yield a fatty acid.","definition_xrefs":["PMID:15952893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"fatty acid amide hydrolase activity","secondary_identifiers":["Reactome:R-HSA-5693751","MetaCyc:RXN6666-2","Reactome:R-HSA-5693742","GO:0017073","MetaCyc:RXN-10756","GO:0103073","GO:0102077","EC:3.5.1.99"],"synonyms":[{"name":"anandamide amidohydrolase activity","type":"narrow"},{"name":"oleamide hydrolase activity","type":"narrow"}],"termid":"GO:0017064"}


id: PBO:0000562
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Ace2","termid":"PBO:0000562"}


id: PBO:0034079
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-member_of","termid":"PBO:0034079"}


id: FYPO:0000521
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which peroxisome localization is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal organelle localization","termid":"FYPO:0006329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abnormal peroxisome localization","synonyms":[{"name":"abnormal peroxisomal distribution","type":"exact"},{"name":"abnormal peroxisome localisation","type":"exact"},{"name":"abnormal peroxisome localization during mitotic cell cycle","type":"related"},{"name":"abnormal peroxisome localization during vegetative growth","type":"exact"},{"name":"peroxisomal distribution: abnormal","type":"related"}],"termid":"FYPO:0000521"}


id: GO:0006285
data:
  {"annotated_genes":["SJAG_02261","SJAG_05257","SJAG_02528","SJAG_03724","SJAG_01971","SJAG_01119"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73254,90918,92203,97631,103117],"is_not":false,"summary":null,"term":"GO:0006285"},{"annotations":[109967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097510"},{"annotations":[90919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045007"}]},"cv_name":"biological_process","definition":"The formation of an AP site, a deoxyribose sugar with a missing base, by DNA glycosylase which recognizes an altered base in DNA and catalyzes its hydrolytic removal. This sugar phosphate is the substrate recognized by the AP endonuclease, which cuts the DNA phosphodiester backbone at the 5' side of the altered site to leave a gap which is subsequently repaired.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"base-excision repair","termid":"GO:0006284"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01119":null,"SJAG_01971":null,"SJAG_02261":null,"SJAG_02528":null,"SJAG_03724":null,"SJAG_05257":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"base-excision repair, AP site formation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0006285","terms_by_termid":{"GO:0006285":null,"GO:0045007":null,"GO:0097510":null}}


id: FYPO:0008123
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable after entering stationary phase, when cells the population are subject to phosphate starvation.","definition_xrefs":["PMID:36794724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"loss of viability in stationary phase","termid":"FYPO:0000245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"loss  of viability in stationary phase upon phopshate starvation","synonyms":[{"name":"decreased chronological lifespan of phosphate-starved cells","type":"exact"}],"termid":"FYPO:0008123"}


id: FYPO:0001556
data:
  {"alleles_by_uniquename":{"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115331,115332,115335,115339,115344,115347],"is_not":false,"summary":null,"term":"FYPO:0001556"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more nuclear envelope than normal. Excess nuclear envelopes may take the form of intranuclear membrane stacks or invaginations, or small cytoplasmic spheres that are attached to the nucleus, have double lipid bilayer membranes, and may contain structures resembling nuclear pores.","definition_xrefs":["PMID:22156749","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope morphology during vegetative growth","termid":"FYPO:0000769"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01906":null,"SJAG_02763":null,"SJAG_03940":null},"genotype_count":6,"genotypes_by_uniquename":{"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1cat(D422E,D424E aa)","display_uniquename":"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-2","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0002403","FYPO:0005447"],"is_obsolete":false,"name":"excess nuclear envelope present","references_by_uniquename":{"PMID:26774782":null},"single_locus_annotated_genes":["SJAG_02763","SJAG_01906","SJAG_03940"],"single_locus_genotype_uniquenames":["ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","nem2delta","nem1delta","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1delta"],"synonyms":[{"name":"excess nuclear envelope present during mitotic cell cycle","type":"related"},{"name":"excess nuclear envelope present during vegetative growth","type":"exact"},{"name":"increased nuclear envelope proliferation","type":"related"},{"name":"nuclear envelope present in greater amount","type":"exact"}],"termid":"FYPO:0001556","terms_by_termid":{"FYPO:0001556":null,"FYPO_EXT:0000001":null}}


id: PATO:0002205
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's ability to hold an electrical charge.","definition_xrefs":["Wikipedia:Wikipedia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capacitance","termid":"PATO:0002205"}


id: PBO:0067954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 256","termid":"PBO:0067954"}


id: PBO:0077666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 12A","termid":"PBO:0077666"}


id: PBO:0083607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a functional protein; overlaps 5' end of essential HSF1 gene encoding heat shock transcription factor","termid":"PBO:0083607"}


id: PBO:0080915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YWHAQ pseudogene 4","termid":"PBO:0080915"}


id: PBO:0001477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein Ssa1 (predicted)","termid":"PBO:0001477"}


id: GO:0001918
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a farnesylated protein.","definition_xrefs":["PMID:14555765","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"farnesylated protein binding","termid":"GO:0001918"}


id: PBO:0077072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymocyte nuclear protein 1","termid":"PBO:0077072"}


id: FYPO:0000778
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which double-strand break repair begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal double-strand break repair during vegetative growth","termid":"FYPO:0000777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000298","FYPO:0001320"],"is_obsolete":false,"name":"delayed onset of double-strand break repair","synonyms":[{"name":"delayed double-strand break repair","type":"exact"},{"name":"delayed onset of double-strand break repair during mitotic cell cycle","type":"related"},{"name":"delayed onset of double-strand break repair during vegetative growth","type":"exact"}],"termid":"FYPO:0000778"}


id: PBO:0045280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 31","termid":"PBO:0045280"}


id: PBO:0083052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Diacylglycerol kinase; localized to the endoplasmic reticulum (ER); overproduction induces enlargement of ER-like membrane structures and suppresses a temperature-sensitive sly1 mutation; contains a CTP transferase domain","termid":"PBO:0083052"}


id: GO:0086079
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A wide pore channel activity that enables a direct cytoplasmic connection from a Purkinje myocyte to a ventricular cardiac muscle cell. The gap junction passes electrical signals between the cells contributing to cardiac conduction.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gap junction channel activity involved in cardiac conduction electrical coupling","termid":"GO:0086075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"gap junction channel activity involved in Purkinje myocyte-ventricular cardiac muscle cell electrical coupling","termid":"GO:0086079"}


id: FYPO:0000440
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to antimycin A. Cells stop growing (and may die) at a concentration of antimycin A that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to antimycin A","synonyms":[{"name":"hypersensitive to antimycin A","type":"exact"},{"name":"sensitive to antimycin A during mitotic cell cycle","type":"related"},{"name":"sensitive to antimycin A during vegetative growth","type":"exact"}],"termid":"FYPO:0000440"}


id: GO:0042122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of alginic acid, a hydrophilic polysaccharide occurring in, for example, the cell walls of brown algae (brown seaweeds).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide catabolic process","termid":"GO:0000272"},{"relation_name":"is_a","term_name":"alginic acid metabolic process","termid":"GO:0042120"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"alginic acid catabolic process","synonyms":[{"name":"alginate catabolic process","type":"exact"},{"name":"alginate catabolism","type":"exact"},{"name":"alginic acid breakdown","type":"exact"},{"name":"alginic acid catabolism","type":"exact"},{"name":"alginic acid degradation","type":"exact"}],"termid":"GO:0042122"}


id: GO:0007573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete age dependent increased protein content (obsolete GO:0007573)","synonyms":[{"name":"age dependent increased protein content","type":"exact"}],"termid":"GO:0007573"}


id: PBO:0054575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1977","termid":"PBO:0054575"}


id: PBO:0080513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASP family member 1","termid":"PBO:0080513"}


id: GO:0045226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of polysaccharides used in extracellular structures.","definition_xrefs":["GOC:go_curators","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"is_a","term_name":"extracellular polysaccharide metabolic process","termid":"GO:0046379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"extracellular polysaccharide biosynthetic process","synonyms":[{"name":"extracellular polysaccharide anabolism","type":"exact"},{"name":"extracellular polysaccharide biosynthesis","type":"exact"},{"name":"extracellular polysaccharide formation","type":"exact"},{"name":"extracellular polysaccharide synthesis","type":"exact"}],"termid":"GO:0045226"}


id: GO:0070554
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains synaptobrevin 2 (VAMP2), SNAP-25, syntaxin 3, and a complexin (or orthologs thereof).","definition_xrefs":["PMID:8824312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"synaptobrevin 2-SNAP-25-syntaxin-3-complexin complex","synonyms":[{"name":"SNARE complex (Stx3, Snap25, Vamp2, Cplx1)","type":"narrow"},{"name":"Stx3-Snap25-Vamp2-Cplx1 complex","type":"narrow"}],"termid":"GO:0070554"}


id: GO:0015254
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of glycerol through a transmembrane aqueous pore or channel.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol transmembrane transporter activity","termid":"GO:0015168"},{"relation_name":"is_a","term_name":"channel activity","termid":"GO:0015267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"glycerol channel activity","secondary_identifiers":["Reactome:R-HSA-507871","MetaCyc:TRANS-RXN-131","RHEA:29675","Reactome:R-HSA-432074","Reactome:R-HSA-432049","Reactome:R-HSA-507869"],"termid":"GO:0015254"}


id: GO:0042332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to gravity.","definition_xrefs":["GOC:jid","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to gravity","termid":"GO:0009629"},{"relation_name":"is_a","term_name":"taxis","termid":"GO:0042330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gravitaxis","secondary_identifiers":["GO:0048062"],"synonyms":[{"name":"geotactic behavior","type":"exact"},{"name":"geotactic behaviour","type":"exact"},{"name":"geotaxis","type":"exact"},{"name":"gravitactic behavior","type":"exact"},{"name":"gravitactic behaviour","type":"exact"},{"name":"taxis in response to gravitational stimulus","type":"exact"},{"name":"taxis in response to gravity","type":"exact"}],"termid":"GO:0042332"}


id: PBO:0048401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAS6 antisense RNA 1","termid":"PBO:0048401"}


id: PBO:0013025
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by vertebrate vCaM","termid":"PBO:0013025"}


id: GO:1902147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to cytokinesis checkpoint signaling.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to cell cycle checkpoint signaling","termid":"GO:1902145"},{"relation_name":"regulates","term_name":"response to cytokinesis checkpoint signaling","termid":"GO:0072399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to cytokinesis checkpoint signaling","secondary_identifiers":["GO:1902149"],"synonyms":[{"name":"regulation of cytokinesis checkpoint effector process","type":"exact"},{"name":"regulation of response to signal involved in cytokinesis checkpoint","type":"exact"}],"termid":"GO:1902147"}


id: PBO:0073924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC16A12 antisense RNA 1","termid":"PBO:0073924"}


id: GO:0051759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of sister chromosomes from the center of the spindle towards the spindle poles, mediated by the shortening of microtubules attached to the chromosomes, during meiosis II.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome movement towards spindle pole","termid":"GO:0016344"},{"relation_name":"part_of","term_name":"meiotic sister chromatid segregation","termid":"GO:0045144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0140013","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"sister chromosome movement towards spindle pole involved in meiotic sister chromatid segregation","synonyms":[{"name":"meiosis II, sister chromosome movement towards spindle pole","type":"exact"},{"name":"sister chromosome movement towards spindle pole during meiosis II","type":"related"}],"termid":"GO:0051759"}


id: PBO:0029567
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_septum_site_selection","termid":"PBO:0029567"}


id: PBO:0041254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 185","termid":"PBO:0041254"}


id: SO:0001244
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The 60-70 nucleotide region remain after Drosha processing of the primary transcript, that folds back upon itself to form a hairpin structure.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miRNA_primary_transcript_region","termid":"SO:0001243"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre_miRNA","synonyms":[{"name":"pre-miRNA","type":"exact"}],"termid":"SO:0001244"}


id: GO:0003122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A vasodilation process resulting from secretion of norepinephrine into the bloodstream or released by nerve endings.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasodilation","termid":"GO:0042311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"norepinephrine-mediated vasodilation","secondary_identifiers":["GO:0003125","GO:0003126"],"synonyms":[{"name":"regulation of vasodilation by circulating noradrenaline","type":"related"},{"name":"regulation of vasodilation by circulating norepinephrine","type":"related"},{"name":"regulation of vasodilation by neuronal noradrenaline","type":"related"},{"name":"regulation of vasodilation by neuronal norepinephrine","type":"related"},{"name":"regulation of vasodilation by noradrenaline","type":"related"},{"name":"regulation of vasodilation by norepinephrine","type":"related"}],"termid":"GO:0003122"}


id: PR:P40383
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 5'-3' exoribonuclease 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12341:SF7","OMA:SCHPO00728","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-3' exoribonuclease 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.14","secondary_identifiers":["UniProtKB:P40383"],"synonyms":[{"name":"Exo II (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-XRN1","type":"exact"},{"name":"exonuclease 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"exonuclease II (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"p140 (Schizosaccharomyces pombe 972h-)","type":"broad"}],"termid":"PR:P40383"}


id: FYPO:0007648
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to pericentric heterochromatin is abnormal.","definition_xrefs":["GO:1902682","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to heterochromatin","termid":"FYPO:0004718"},{"relation_name":"is_a","term_name":"abnormal protein localization to centromere","termid":"FYPO:0005597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization to pericentric heterochromatin","synonyms":[{"name":"abnormal protein localization to centromeric heterochromatin","type":"exact"},{"name":"abnormal protein localization to nuclear centromeric heterochromatin","type":"exact"}],"termid":"FYPO:0007648"}


id: PBO:0049251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-rich RNA sequence binding factor 1","termid":"PBO:0049251"}


id: GO:0042357
data:
  {"annotated_genes":["SJAG_02421","SJAG_03362","SJAG_04282","SJAG_00381","SJAG_02420","SJAG_04866"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90351,109653,95582,109659,110075,112089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009229"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving thiamine diphosphate, a derivative of thiamine (vitamin B1) which acts as a coenzyme in a range of processes including the Krebs cycle.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"thiamine-containing compound metabolic process","termid":"GO:0042723"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00381":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_03362":null,"SJAG_04282":null,"SJAG_04866":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"thiamine diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"TPP metabolic process","type":"exact"},{"name":"TPP metabolism","type":"exact"},{"name":"thiamin diphosphate metabolic process","type":"exact"},{"name":"thiamin diphosphate metabolism","type":"exact"},{"name":"thiamin pyrophosphate metabolic process","type":"exact"},{"name":"thiamin pyrophosphate metabolism","type":"exact"},{"name":"thiamine diphosphate metabolism","type":"exact"},{"name":"thiamine pyrophosphate metabolic process","type":"exact"},{"name":"thiamine pyrophosphate metabolism","type":"exact"}],"termid":"GO:0042357","terms_by_termid":{"GO:0009229":null}}


id: PBO:0005213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation specific protein Spo13","termid":"PBO:0005213"}


id: PBO:0030546
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_cellular_cAMP_level","termid":"PBO:0030546"}


id: GO:0018025
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + calmodulin L-lysine = S-adenosyl-L-homocysteine + calmodulin N6-methyl-L-lysine.","definition_xrefs":["EC:2.1.1.60"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lysine N-methyltransferase activity","termid":"GO:0016279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0016740","GO:0003674","GO:0016741","GO:0008276"],"is_obsolete":false,"name":"calmodulin-lysine N-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.60-RXN","Reactome:R-HSA-6786205","RHEA:21556"],"synonyms":[{"name":"S-adenosyl-L-methionine:calmodulin-L-lysine 6-N-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:calmodulin-L-lysine N6-methyltransferase activity","type":"related"},{"name":"S-adenosylmethionine:calmodulin (lysine) N-methyltransferase activity","type":"related"}],"termid":"GO:0018025"}


id: GO:0100032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates phospholipid biosynthetic process.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phospholipid biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100032)","termid":"GO:0100032"}


id: PBO:0081664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 586","termid":"PBO:0081664"}


id: GO:0032201
data:
  {"annotated_genes":["SJAG_03624"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93254],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0032215"}]},"cv_name":"biological_process","definition":"The process in which telomeric DNA is synthesized semi-conservatively by the conventional replication machinery and telomeric accessory factors as part of cell cycle DNA replication.","definition_xrefs":["GOC:vw","GOC:BHF_telomere","GOC:rl","PMID:16598261","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance","termid":"GO:0000723"},{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"nuclear DNA replication","termid":"GO:0033260"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0032200"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0006260","GO:0006259","GO:0008150","GO:0032200"],"is_obsolete":false,"name":"telomere maintenance via semi-conservative replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"equal telomere replication","type":"related"},{"name":"telomeric fork progression","type":"narrow"},{"name":"telomeric replication fork progression","type":"narrow"}],"termid":"GO:0032201","terms_by_termid":{"GO:0032215":null}}


id: GO:0070164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of adiponectin from a cell.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hormone secretion","termid":"GO:0046888"},{"relation_name":"is_a","term_name":"negative regulation of protein secretion","termid":"GO:0050709"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of adiponectin secretion","termid":"GO:0070163"},{"relation_name":"negatively_regulates","term_name":"adiponectin secretion","termid":"GO:0070162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of adiponectin secretion","synonyms":[{"name":"down regulation of adiponectin secretion","type":"exact"},{"name":"down-regulation of adiponectin secretion","type":"exact"},{"name":"downregulation of adiponectin secretion","type":"exact"},{"name":"inhibition of adiponectin secretion","type":"narrow"}],"termid":"GO:0070164"}


id: FYPO:0002749
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-asparagine measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular asparagine level","synonyms":[{"name":"decreased cellular L-asparagine level","type":"exact"},{"name":"decreased cellular asparagine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular asparagine level during vegetative growth","type":"exact"},{"name":"decreased level of asparagine in cell","type":"exact"},{"name":"reduced cellular asparagine level","type":"exact"},{"name":"reduced level of asparagine in cell","type":"exact"}],"termid":"FYPO:0002749"}


id: PBO:0062980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PABPN1 pseudogene 2","termid":"PBO:0062980"}


id: PBO:0079962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 9 Y-linked","termid":"PBO:0079962"}


id: PBO:0031609
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_G1_phase_progression","termid":"PBO:0031609"}


id: PBO:0004589
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIP box","termid":"PBO:0004589"}


id: PBO:0080690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WNK lysine deficient protein kinase 2","termid":"PBO:0080690"}


id: PBO:0064972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 28, pseudogene","termid":"PBO:0064972"}


id: GO:0042549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stabilization of the photosystem II protein complex, resulting from the phosphorylation of its structural protein subunits, in a cell actively involved in photosynthesis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photosynthesis, light reaction","termid":"GO:0042548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"photosystem II stabilization","termid":"GO:0042549"}


id: PBO:0030001
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-P-bodies_present_in_decreased_numbers_during_vegetative_growth","termid":"PBO:0030001"}


id: PBO:0002346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decaprenyl diphosphate synthase subunit 2 Dlp1","termid":"PBO:0002346"}


id: GO:0051141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of natural killer T cell proliferation.","definition_xrefs":["PMID:9133426","ISBN:0781735149","PMID:12154375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of alpha-beta T cell proliferation","termid":"GO:0046642"},{"relation_name":"is_a","term_name":"negative regulation of NK T cell activation","termid":"GO:0051134"},{"relation_name":"is_a","term_name":"regulation of NK T cell proliferation","termid":"GO:0051140"},{"relation_name":"negatively_regulates","term_name":"NK T cell proliferation","termid":"GO:0001866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of NK T cell proliferation","synonyms":[{"name":"down regulation of NK T cell proliferation","type":"exact"},{"name":"down-regulation of NK T cell proliferation","type":"exact"},{"name":"downregulation of NK T cell proliferation","type":"exact"},{"name":"inhibition of NK T cell proliferation","type":"narrow"},{"name":"negative regulation of NK T lymphocyte proliferation","type":"exact"},{"name":"negative regulation of NK T-cell proliferation","type":"exact"},{"name":"negative regulation of NK T-lymphocyte proliferation","type":"exact"},{"name":"negative regulation of NKT cell proliferation","type":"exact"},{"name":"negative regulation of NT cell proliferation","type":"exact"},{"name":"negative regulation of natural T cell proliferation","type":"exact"},{"name":"negative regulation of natural killer T cell proliferation","type":"exact"}],"termid":"GO:0051141"}


id: PBO:0065942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RACK1 pseudogene 2","termid":"PBO:0065942"}


id: PBO:0088300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha/Beta hydrolase fold","termid":"PBO:0088300"}


id: FYPO:0007786
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the cell is longer than normal, and progression through the meiotic cell cycle is arrested at the G2/MI phase transition. A cell can elongate when arrested at the G2/MI transition if it overcomes the growth arrest that usually occurs.","definition_xrefs":["PMID:28476936","PomBase:mah","PomBase:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated cell","termid":"FYPO:0000017"},{"relation_name":"is_a","term_name":"abnormal cell cycle arrest at meiotic G2/MI transition","termid":"FYPO:0007785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000005","FYPO:0000631"],"is_obsolete":false,"name":"elongated cell with cell cycle arrest at meiotic G2/MI transition","synonyms":[{"name":"elongated cell with abnormal cell cycle arrest at G2/M1 transition","type":"exact"},{"name":"elongated cell with abnormal cell cycle arrest at G2/MI transition of meiotic cell cycle","type":"exact"},{"name":"elongated cell with abnormal cell cycle arrest at meiotic G2/MI phase transition","type":"exact"},{"name":"elongated cell with abnormal cell cycle arrest at meiotic G2/MI transition","type":"exact"},{"name":"elongated cell with abnormal cell cycle arrest at meiotic cell cycle G2/MI phase transition","type":"exact"},{"name":"elongated cell with abnormal meiotic cell cycle arrest at G2/MI phase transition","type":"exact"},{"name":"elongated cell with abnormal meiotic cell cycle arrest at G2/MI transition","type":"exact"},{"name":"elongated cells during meiotic G2/M1 arrest","type":"exact"},{"name":"elongated cells during meiotic G2/MI arrest","type":"exact"},{"name":"long cell with cell cycle arrest at meiotic G2/MI transition","type":"exact"}],"termid":"FYPO:0007786"}


id: GO:0106366
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + guanosine = ADP + GMP.","definition_xrefs":["PMID:10879466","PMID:7665468","RHEA:27710"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"guanosine kinase activity","secondary_identifiers":["EC:2.7.1.73"],"termid":"GO:0106366"}


id: PATO:0000310
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000310 color value (obsolete PATO:0000310)","termid":"PATO:0000310"}


id: PR:Q9UTG6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A methionyl-tRNA formyltransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11138:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionyl-tRNA formyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.09c","secondary_identifiers":["UniProtKB:Q9UTG6"],"synonyms":[{"name":"SPAC1805.09c","type":"related"},{"name":"Spom972h-MTFMT","type":"exact"}],"termid":"PR:Q9UTG6"}


id: PBO:0069723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1004, pseudogene","termid":"PBO:0069723"}


id: PBO:0004861
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.15","termid":"PBO:0004861"}


id: PBO:0064556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-)","termid":"PBO:0064556"}


id: MOD:01634
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-aspartic acid.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-aspartic acid removal","termid":"MOD:01634"}


id: PBO:0082618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of a complex containing Cef1p; putatively involved in pre-mRNA splicing; has similarity to E. coli DnaJ and other DnaJ-like proteins and to S. pombe Cwf23p","termid":"PBO:0082618"}


id: PBO:0087396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Strand exchange protein; forms helical filament with DNA that searches for homology; involved in recombinational repair of DNA DSBs during vegetative growth and meiosis; phosphorylation by Cdc28p in G2/M phase promotes DNA binding, strand invasion, and primer extension; L1 and L2 motifs of DNA binding site I have critical roles in ensuring DNA fidelity during meiotic recombination; RAD51 and RAD4 pathways confer resistance to benzo[a]pyrene dihydrodiol; homolog of Dmc1p and bacterial RecA","termid":"PBO:0087396"}


id: GO:0042430
data:
  {"annotated_genes":["SJAG_03167","SJAG_01455","SJAG_02505","SJAG_05007"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100445,99564,110725,87623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000162"},{"annotations":[99565,87624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006568"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving compounds that contain an indole (2,3-benzopyrrole) skeleton.","definition_xrefs":["GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01455":null,"SJAG_02505":null,"SJAG_03167":null,"SJAG_05007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"indole-containing compound metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0042434"],"synonyms":[{"name":"indole and derivative metabolic process","type":"exact"},{"name":"indole and derivative metabolism","type":"exact"},{"name":"indole derivative metabolic process","type":"narrow"},{"name":"indole derivative metabolism","type":"narrow"},{"name":"indole-containing compound metabolism","type":"exact"},{"name":"ketole metabolic process","type":"exact"},{"name":"ketole metabolism","type":"exact"}],"termid":"GO:0042430","terms_by_termid":{"GO:0000162":null,"GO:0006568":null}}


id: PBO:0082882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyanamide hydratase that detoxifies cyanamide; member of the HD domain metalloprotein superfamily; expression is induced over 100-fold by cyanamide and by SN2-type DNA alkylating agents such as MMS and DMA; induction decreased in rad6 and rad18 mutants; gene and protein are identical to DDI3 and Ddi3p","termid":"PBO:0082882"}


id: GO:1901969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of polynucleotide 3'-phosphatase activity.","definition_xrefs":["GOC:TermGenie","PMID:23316050"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of polynucleotide 3'-phosphatase activity (obsolete GO:1901969)","synonyms":[{"name":"activation of 2'(3')-polynucleotidase activity","type":"exact"},{"name":"activation of 5'-polynucleotidekinase 3'-phosphatase activity","type":"exact"},{"name":"activation of DNA 3'-phosphatase activity","type":"exact"},{"name":"activation of deoxyribonucleate 3'-phosphatase activity","type":"exact"},{"name":"activation of polynucleotide 3'-phosphatase activity","type":"narrow"},{"name":"activation of polynucleotide 3'-phosphohydrolase activity","type":"exact"},{"name":"positive regulation of 2'(3')-polynucleotidase activity","type":"exact"},{"name":"positive regulation of 5'-polynucleotidekinase 3'-phosphatase activity","type":"exact"},{"name":"positive regulation of DNA 3'-phosphatase activity","type":"exact"},{"name":"positive regulation of deoxyribonucleate 3'-phosphatase activity","type":"exact"},{"name":"positive regulation of polynucleotide 3'-phosphohydrolase activity","type":"exact"},{"name":"up regulation of 2'(3')-polynucleotidase activity","type":"exact"},{"name":"up regulation of 5'-polynucleotidekinase 3'-phosphatase activity","type":"exact"},{"name":"up regulation of DNA 3'-phosphatase activity","type":"exact"},{"name":"up regulation of deoxyribonucleate 3'-phosphatase activity","type":"exact"},{"name":"up regulation of polynucleotide 3'-phosphatase activity","type":"exact"},{"name":"up regulation of polynucleotide 3'-phosphohydrolase activity","type":"exact"},{"name":"up-regulation of 2'(3')-polynucleotidase activity","type":"exact"},{"name":"up-regulation of 5'-polynucleotidekinase 3'-phosphatase activity","type":"exact"},{"name":"up-regulation of DNA 3'-phosphatase activity","type":"exact"},{"name":"up-regulation of deoxyribonucleate 3'-phosphatase activity","type":"exact"},{"name":"up-regulation of polynucleotide 3'-phosphatase activity","type":"exact"},{"name":"up-regulation of polynucleotide 3'-phosphohydrolase activity","type":"exact"},{"name":"upregulation of 2'(3')-polynucleotidase activity","type":"exact"},{"name":"upregulation of 5'-polynucleotidekinase 3'-phosphatase activity","type":"exact"},{"name":"upregulation of DNA 3'-phosphatase activity","type":"exact"},{"name":"upregulation of deoxyribonucleate 3'-phosphatase activity","type":"exact"},{"name":"upregulation of polynucleotide 3'-phosphatase activity","type":"exact"},{"name":"upregulation of polynucleotide 3'-phosphohydrolase activity","type":"exact"}],"termid":"GO:1901969"}


id: PBO:0109090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 4","termid":"PBO:0109090"}


id: PBO:0004091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex Spc97/GCP2 subunit Alp4","termid":"PBO:0004091"}


id: FYPO:0002389
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin at centromere outer repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:21151114","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to centromeric heterochromatin","termid":"FYPO:0008154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to heterochromatin at centromere outer repeat","secondary_identifiers":["FYPO:0005081"],"synonyms":[{"name":"normal protein localisation to chromatin at centromere outer repeat","type":"exact"},{"name":"normal protein localisation to heterochromatin at centromere outer repeat","type":"exact"},{"name":"normal protein localization at centromere otr","type":"exact"},{"name":"normal protein localization at centromeric outer repeat region","type":"exact"},{"name":"normal protein localization at pericentric region","type":"related"},{"name":"normal protein localization at pericentromeric region","type":"related"},{"name":"normal protein localization to centromere outer repeat heterochromatin","type":"exact"},{"name":"normal protein localization to chromatin at centromere otr","type":"exact"},{"name":"normal protein localization to chromatin at centromere outer repeat","type":"exact"},{"name":"normal protein localization to chromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at centromere outer repeat during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin at centromeric outer repeat","type":"exact"},{"name":"normal protein localization to chromatin at pericentric region","type":"related"},{"name":"normal protein localization to chromatin at pericentromeric region","type":"related"},{"name":"normal protein localization to heterochromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"normal protein localization to heterochromatin at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0002389"}


id: PBO:0003925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleocytoplasmic transport chaperone Srp40 (predicted)","termid":"PBO:0003925"}


id: GO:0043870
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(2)-acetyl-L-aminoadipate-semialdehyde + NADP+ + phosphate = N(2)-acetyl-L-gamma-aminoadipyl phosphate + NADPH.","definition_xrefs":["RHEA:41948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"N-acetyl-gamma-aminoadipyl-phosphate reductase activity","secondary_identifiers":["MetaCyc:RXN-5183"],"synonyms":[{"name":"AGPR","type":"related"},{"name":"ArgC","type":"related"},{"name":"LysY","type":"related"},{"name":"N-acetyl-alpha-glutamyl-phosphate reductase activity","type":"exact"},{"name":"N-acetyl-aminoadipate semialdehyde dehydrogenase activity","type":"exact"},{"name":"NAGSA dehydrogenase activity","type":"broad"}],"termid":"GO:0043870"}


id: FYPO:0003902
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of etoposide than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0002682","FYPO:0000139"],"is_obsolete":false,"name":"resistance to etoposide","synonyms":[{"name":"resistance to etoposide during mitotic cell cycle","type":"related"},{"name":"resistance to etoposide during vegetative growth","type":"exact"},{"name":"resistant to etoposide","type":"exact"}],"termid":"FYPO:0003902"}


id: GO:0047719
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole + O2 = 2-formamidobenzaldehyde.","definition_xrefs":["EC:1.13.11.17","RHEA:11212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"indole 2,3-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R02338","MetaCyc:INDOLE-23-DIOXYGENASE-RXN"],"synonyms":[{"name":"IDO","type":"related"},{"name":"indole oxidase activity","type":"related"},{"name":"indole-oxygen 2,3-oxidoreductase (decyclizing)","type":"related"},{"name":"indole:O2 oxidoreductase activity","type":"related"},{"name":"indole:oxygen 2,3-oxidoreductase (decyclizing)","type":"related"}],"termid":"GO:0047719"}


id: GO:0061951
data:
  {"annotated_genes":["SJAG_03756","SJAG_01114","SJAG_04609","SJAG_01809","SJAG_02177","SJAG_00144","SJAG_01516","SJAG_00916","SJAG_03970","SJAG_03029","SJAG_04565","SJAG_02912","SJAG_03915","SJAG_02282","SJAG_00330","SJAG_00858","SJAG_02231","SJAG_03838","SJAG_00379"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91782],"is_not":false,"summary":null,"term":"GO:0061951"},{"annotations":[114560,103421,108844,90951,87343,114945,97187,109069,88331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099638"},{"annotations":[103093,109071,102457,91209,94774,103200,104848,105631,87219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043001"},{"annotations":[84159],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0042997"}]},"cv_name":"biological_process","definition":"The directed movement of a protein to a specific location in a plasma membrane.","definition_xrefs":["GOC:dph","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to plasma membrane","termid":"GO:0072659"},{"relation_name":"is_a","term_name":"establishment of protein localization to membrane","termid":"GO:0090150"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00144":null,"SJAG_00330":null,"SJAG_00379":null,"SJAG_00858":null,"SJAG_00916":null,"SJAG_01114":null,"SJAG_01516":null,"SJAG_01809":null,"SJAG_02177":null,"SJAG_02231":null,"SJAG_02282":null,"SJAG_02912":null,"SJAG_03029":null,"SJAG_03756":null,"SJAG_03838":null,"SJAG_03915":null,"SJAG_03970":null,"SJAG_04565":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of protein localization to plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061951","terms_by_termid":{"GO:0042997":null,"GO:0043001":null,"GO:0061951":null,"GO:0099638":null}}


id: GO:0106411
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5'XMP + H20 = phosphate + xanthosine.","definition_xrefs":["RHEA:28530","PMID:34824243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5'-nucleotidase activity","termid":"GO:0008253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"XMP 5'-nucleosidase activity","secondary_identifiers":["EC:3.1.3.5","MetaCyc:XMPXAN-RXN"],"termid":"GO:0106411"}


id: PBO:0030064
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_phosphoglycerate_mutase_activity","termid":"PBO:0030064"}


id: GO:0033855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + nicotianamine = 3''-deamino-3''-oxonicotianamine + L-glutamate.","definition_xrefs":["RHEA:22104","EC:2.6.1.80"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0003824","GO:0016769","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"nicotianamine aminotransferase activity","secondary_identifiers":["KEGG_REACTION:R07277","MetaCyc:2.6.1.80-RXN"],"synonyms":[{"name":"NAAT","type":"related"},{"name":"NAAT-I","type":"related"},{"name":"NAAT-II","type":"related"},{"name":"NAAT-III","type":"related"},{"name":"nicotianamine transaminase activity","type":"related"},{"name":"nicotianamine:2-oxoglutarate aminotransferase activity","type":"related"}],"termid":"GO:0033855"}


id: FYPO:0005337
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at positions 9 and 14 of histone H3 occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased histone H3-K9K14 acetylation during vegetative growth (obsolete FYPO:0005337)","synonyms":[{"name":"increased histone H3 K9K14 acetylation during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 and K14 acetylation during vegetative growth","type":"exact"},{"name":"increased histone H3-K9K14 acetylation during mitotic cell cycle","type":"related"},{"name":"increased histone lysine H3 K9K14 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005337"}


id: GO:1904752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vascular associated smooth muscle cell migration.","definition_xrefs":["GOC:BHF_miRNA","GOC:rph","GO_REF:0000058","GOC:TermGenie","PMID:20693317","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle cell migration","termid":"GO:0014910"},{"relation_name":"regulates","term_name":"vascular associated smooth muscle cell migration","termid":"GO:1904738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular associated smooth muscle cell migration","synonyms":[{"name":"regulation of vascular smooth muscle cell migration","type":"exact"}],"termid":"GO:1904752"}


id: PBO:0062406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 31 pseudogene","termid":"PBO:0062406"}


id: PBO:0056090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysozyme g1","termid":"PBO:0056090"}


id: PBO:0004174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER oxidoreductin Ero1a","termid":"PBO:0004174"}


id: GO:0036291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The phosphorylation by a protein of one or more of its own amino acid residues.","definition_xrefs":["GOC:jsg","PMID:9201908"],"gene_count":0,"genotype_count":0,"name":"obsolete protein cis-autophosphorylation (obsolete GO:0036291)","synonyms":[{"name":"cis-autophosphorylation","type":"exact"}],"termid":"GO:0036291"}


id: GO:1901701
data:
  {"annotated_genes":["SJAG_04312","SJAG_04403","SJAG_00574","SJAG_06611","SJAG_05256","SJAG_01734","SJAG_02515","SJAG_04953","SJAG_02960","SJAG_02444","SJAG_01199","SJAG_04026","SJAG_03081","SJAG_01216","SJAG_04788","SJAG_01754","SJAG_03303","SJAG_03653","SJAG_04399","SJAG_01699","SJAG_05181","SJAG_04823","SJAG_02010","SJAG_01457","SJAG_00668","SJAG_01254","SJAG_04632","SJAG_01162","SJAG_00141","SJAG_00472"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112637,101947,102892,97905,105065,90287,102538,111598,105568],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"},{"annotations":[108790],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110095"},{"annotations":[96059,104884,101085,113440,91256,114350],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061692"},{"annotations":[101088],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140041"},{"annotations":[109565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071244"},{"annotations":[101267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036245"},{"annotations":[96060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034614"},{"annotations":[91597,99542],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0046294"},{"annotations":[89182,64549,96218,95333,67556,106189,58048,85047,85470,106145],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an oxygen-containing compound stimulus.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_00472":null,"SJAG_00574":null,"SJAG_00668":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01254":null,"SJAG_01457":null,"SJAG_01699":null,"SJAG_01734":null,"SJAG_01754":null,"SJAG_02010":null,"SJAG_02444":null,"SJAG_02515":null,"SJAG_02960":null,"SJAG_03081":null,"SJAG_03303":null,"SJAG_03653":null,"SJAG_04026":null,"SJAG_04312":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05181":null,"SJAG_05256":null,"SJAG_06611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to oxygen-containing compound","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"cellular response to oxygen molecular entity","type":"exact"}],"termid":"GO:1901701","terms_by_termid":{"GO:0010619":null,"GO:0019430":null,"GO:0034614":null,"GO:0036245":null,"GO:0046294":null,"GO:0061692":null,"GO:0071244":null,"GO:0110095":null,"GO:0140041":null}}


id: GO:0050268
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: coniferyl alcohol + NADP+ = coniferyl aldehyde + NADPH.","definition_xrefs":["RHEA:22444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"coniferyl-alcohol dehydrogenase activity","secondary_identifiers":["EC:1.1.1.194","MetaCyc:RXN-2602"],"synonyms":[{"name":"coniferyl-alcohol:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0050268"}


id: PBO:0074858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 45B","termid":"PBO:0074858"}


id: GO:0031986
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A leucoplast in which protein is stored.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leucoplast","termid":"GO:0009516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"proteinoplast","secondary_identifiers":["Wikipedia:Proteinoplast"],"termid":"GO:0031986"}


id: FYPO:0004687
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to lovastatin. Cells stop growing (and may die) at a concentration of lovastatin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to lovastatin","synonyms":[{"name":"hypersensitive to lovastatin","type":"exact"},{"name":"sensitive to lovastatin during mitotic cell cycle","type":"related"},{"name":"sensitive to lovastatin during vegetative growth","type":"exact"}],"termid":"FYPO:0004687"}


id: PBO:0052989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminin subunit alpha 1","termid":"PBO:0052989"}


id: PBO:0058231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4520-2","termid":"PBO:0058231"}


id: GO:0034166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to toll-like receptor 10.","definition_xrefs":["PMID:17328678","GOC:add","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface toll-like receptor signaling pathway","termid":"GO:0140895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"toll-like receptor 10 signaling pathway","synonyms":[{"name":"TLR10 signaling pathway","type":"exact"},{"name":"toll-like receptor 10 signalling pathway","type":"exact"}],"termid":"GO:0034166"}


id: GO:0051311
data:
  {"annotated_genes":["SJAG_00794","SJAG_01837","SJAG_05220","SJAG_01224","SJAG_05295","SJAG_02731","SJAG_00418","SJAG_05019","SJAG_03327","SJAG_02346","SJAG_01211","SJAG_03217","SJAG_03698","SJAG_03683","SJAG_03437","SJAG_03989","SJAG_05266","SJAG_01805","SJAG_00678","SJAG_04076","SJAG_02814","SJAG_04508","SJAG_07002","SJAG_03926","SJAG_05319","SJAG_00918","SJAG_04259","SJAG_01775","SJAG_01278","SJAG_03220","SJAG_01371"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112743],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051316"},{"annotations":[89886,83941],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051456"},{"annotations":[83886,89850,94682,86348,109846,113133,103874,111604,97388],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031619"},{"annotations":[112758],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904967"},{"annotations":[96580,98501,97392,106410,112993,93968,109294,104937,101526,105198,106369,91623,94690,110161,111993,105944,91372,85816,103558,87036,85209,103878,89867],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051455"}]},"cv_name":"biological_process","definition":"A chromosome localization process whereby chromosomes are positioned in a specific order and orientation at the metaphase plate (spindle equator), during meiotic chromosome segregation. This alignment ensures that each daughter cell will receive the correct number of chromosomes during cell division.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metaphase chromosome alignment","termid":"GO:0051310"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic chromosome segregation","termid":"GO:0045132"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00418":null,"SJAG_00678":null,"SJAG_00794":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01278":null,"SJAG_01371":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02346":null,"SJAG_02731":null,"SJAG_02814":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03327":null,"SJAG_03437":null,"SJAG_03683":null,"SJAG_03698":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04076":null,"SJAG_04259":null,"SJAG_04508":null,"SJAG_05019":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05295":null,"SJAG_05319":null,"SJAG_07002":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0007049","GO:0140013","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"meiotic metaphase chromosome alignment","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"metaphase plate congression during meiosis","type":"exact"}],"termid":"GO:0051311","terms_by_termid":{"GO:0031619":null,"GO:0051316":null,"GO:0051455":null,"GO:0051456":null,"GO:1904967":null}}


id: PR:O42934
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- chp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromo domain-containing protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.10","synonyms":[{"name":"Spom972h-chp2","type":"exact"}],"termid":"PR:O42934"}


id: GO:0090055
data:
  {"annotated_genes":["SJAG_02342","SJAG_00142","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87237,90431,106397],"is_not":false,"summary":null,"term":"GO:0090055"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate, or extent of heterochromatin formation at silent mating-type cassette.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of heterochromatin formation","termid":"GO:0031453"},{"relation_name":"is_a","term_name":"regulation of silent mating-type cassette heterochromatin formation","termid":"GO:0090054"},{"relation_name":"positively_regulates","term_name":"silent mating-type cassette heterochromatin formation","termid":"GO:0030466"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_02342":null,"SJAG_02592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006325"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0010467","GO:0006325","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of silent mating-type cassette heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of chromatin silencing at silent mating-type cassette","type":"exact"},{"name":"positive regulation of silent mating-type cassette heterochromatin assembly","type":"exact"}],"termid":"GO:0090055","terms_by_termid":{"GO:0090055":null}}


id: GO:0018884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving carbazole, a heterocyclic aromatic compound containing a dibenzopyrrole system that is produced during coal gasification and is present in cigarette smoke. Coal tar produced at high temperature contains an average of 1.5% carbazole. It is used widely in synthesis of dyes, pharmaceuticals, and plastics and is a suspected carcinogen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carbazole metabolic process","secondary_identifiers":["UM-BBD_pathwayID:car"],"synonyms":[{"name":"CAR metabolic process","type":"exact"},{"name":"CAR metabolism","type":"exact"},{"name":"carbazole metabolism","type":"exact"}],"termid":"GO:0018884"}


id: GO:0021784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the postganglionic portion of the parasympathetic fiber over time, from its formation to the mature structure. The parasympathetic fiber is one of the two divisions of the vertebrate autonomic nervous system. Parasympathetic nerves emerge cranially as pre ganglionic fibers from oculomotor, facial, glossopharyngeal and vagus and from the sacral region of the spinal cord. Most neurons are cholinergic and responses are mediated by muscarinic receptors. The parasympathetic system innervates, for example: salivary glands, thoracic and abdominal viscera, bladder and genitalia.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:jid","GOC:dgh","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autonomic nervous system development","termid":"GO:0048483"},{"relation_name":"part_of","term_name":"peripheral nervous system development","termid":"GO:0007422"},{"relation_name":"part_of","term_name":"parasympathetic nervous system development","termid":"GO:0048486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"postganglionic parasympathetic fiber development","termid":"GO:0021784"}


id: GO:1902320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA duplex unwinding that is involved in nuclear cell cycle DNA replication.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle DNA replication DNA unwinding","termid":"GO:1902297"},{"relation_name":"part_of","term_name":"nuclear DNA replication","termid":"GO:0033260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"nuclear DNA replication DNA duplex unwinding","synonyms":[{"name":"DNA duplex unwinding involved in DNA replication during S phase","type":"related"},{"name":"DNA duplex unwinding involved in DNA replication involved in S phase","type":"exact"},{"name":"DNA duplex unwinding involved in DNA replication involved in S-phase","type":"exact"},{"name":"DNA duplex unwinding involved in nuclear cell cycle DNA replication","type":"exact"},{"name":"DNA unwinding involved in DNA replication during S phase","type":"related"},{"name":"DNA unwinding involved in DNA replication involved in S phase","type":"exact"},{"name":"DNA unwinding involved in DNA replication involved in S-phase","type":"exact"},{"name":"DNA unwinding involved in nuclear cell cycle DNA replication","type":"exact"},{"name":"duplex DNA melting involved in DNA replication during S phase","type":"related"},{"name":"duplex DNA melting involved in DNA replication involved in S phase","type":"exact"},{"name":"duplex DNA melting involved in DNA replication involved in S-phase","type":"exact"}],"termid":"GO:1902320"}


id: GO:0097631
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the omegasome membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["PMID:24591649","GOC:mf","PMID:18725538"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of omegasome membrane (obsolete GO:0097631)","synonyms":[{"name":"integral to omegasome membrane","type":"narrow"},{"name":"omegasome integral membrane protein","type":"related"}],"termid":"GO:0097631"}


id: GO:0034726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The controlled disassembly of chromatin outside the context of DNA replication.","definition_xrefs":["PMID:17510629","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA replication-independent nucleosome disassembly (obsolete GO:0034726)","synonyms":[{"name":"DNA replication-independent chromatin disassembly","type":"related"}],"termid":"GO:0034726"}


id: PBO:0065062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2","termid":"PBO:0065062"}


id: GO:0050695
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoylformate = benzaldehyde + CO2.","definition_xrefs":["MetaCyc:BENZOYLFORMATE-DECARBOXYLASE-RXN","EC:4.1.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"benzoylformate decarboxylase activity","secondary_identifiers":["RHEA:23368","UM-BBD_reactionID:r1049"],"synonyms":[{"name":"benzoylformate carboxy-lyase (benzaldehyde-forming)","type":"related"},{"name":"benzoylformate carboxy-lyase activity","type":"related"},{"name":"phenylglyoxylate decarboxylase activity","type":"exact"}],"termid":"GO:0050695"}


id: PBO:0067902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 204","termid":"PBO:0067902"}


id: GO:0000038
data:
  {"annotated_genes":["SJAG_01458","SJAG_02885","SJAG_01300","SJAG_02717","SJAG_01356"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85574,101929,107383,99537,87993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042761"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a very long-chain fatty acid. A very long-chain fatty acid has an aliphatic tail containing more than 22 carbons.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid metabolic process","termid":"GO:0006631"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01300":null,"SJAG_01356":null,"SJAG_01458":null,"SJAG_02717":null,"SJAG_02885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"very long-chain fatty acid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"very long chain fatty acid metabolic process","type":"exact"},{"name":"very-long-chain fatty acid metabolic process","type":"exact"},{"name":"very-long-chain fatty acid metabolism","type":"exact"}],"termid":"GO:0000038","terms_by_termid":{"GO:0042761":null}}


id: GO:0015571
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of N-acetylgalactosamine from one side of a membrane to the other. N-acetylgalactosamine, 2-acetamido-2-deoxygalactopyranose, is the n-acetyl derivative of galactosamine.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosamine transmembrane transporter activity","termid":"GO:0019196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"N-acetylgalactosamine transmembrane transporter activity","secondary_identifiers":["GO:0015590"],"synonyms":[{"name":"N-acetylgalactosamine permease activity","type":"exact"}],"termid":"GO:0015571"}


id: GO:0035616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A histone deubiquitination process in which a ubiquitin monomer is removed from a conserved lysine residue in the C-terminus of histone H2B. The conserved lysine residue is K119 in fission yeast, K123 in budding yeast, or K120 in mammals.","definition_xrefs":["PMID:15657442","GOC:vw","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2B conserved C-terminal lysine deubiquitination (obsolete GO:0035616)","synonyms":[{"name":"budding yeast H2B K123 deubiquitination","type":"narrow"},{"name":"fission yeast H2B K119 deubiquitination","type":"narrow"},{"name":"mammalian H2B K120 deubiquitination","type":"narrow"}],"termid":"GO:0035616"}


id: GO:1902553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of catalase activity.","definition_xrefs":["PMID:24285797","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catalase activity","termid":"GO:1902551"},{"relation_name":"is_a","term_name":"positive regulation of peroxidase activity","termid":"GO:2000470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of catalase activity","synonyms":[{"name":"activation of CAT","type":"related"},{"name":"activation of bacterial catalase-peroxidase activity","type":"narrow"},{"name":"activation of caperase activity","type":"narrow"},{"name":"activation of catalase activity","type":"narrow"},{"name":"activation of catalase reaction","type":"narrow"},{"name":"activation of catalase-peroxidase activity","type":"narrow"},{"name":"activation of equilase activity","type":"narrow"},{"name":"activation of haem catalase activity","type":"narrow"},{"name":"activation of heme catalase activity","type":"narrow"},{"name":"activation of hydrogen-peroxide:hydrogen-peroxide oxidoreductase activity","type":"narrow"},{"name":"activation of manganese catalase activity","type":"narrow"},{"name":"activation of optidase activity","type":"narrow"},{"name":"positive regulation of CAT","type":"related"},{"name":"positive regulation of bacterial catalase-peroxidase activity","type":"narrow"},{"name":"positive regulation of caperase activity","type":"exact"},{"name":"positive regulation of catalase reaction","type":"exact"},{"name":"positive regulation of catalase-peroxidase activity","type":"exact"},{"name":"positive regulation of equilase activity","type":"exact"},{"name":"positive regulation of haem catalase activity","type":"narrow"},{"name":"positive regulation of heme catalase activity","type":"narrow"},{"name":"positive regulation of hydrogen-peroxide:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"positive regulation of manganese catalase activity","type":"narrow"},{"name":"positive regulation of optidase activity","type":"exact"},{"name":"up regulation of CAT","type":"related"},{"name":"up regulation of bacterial catalase-peroxidase activity","type":"narrow"},{"name":"up regulation of caperase activity","type":"exact"},{"name":"up regulation of catalase activity","type":"exact"},{"name":"up regulation of catalase reaction","type":"exact"},{"name":"up regulation of catalase-peroxidase activity","type":"exact"},{"name":"up regulation of equilase activity","type":"exact"},{"name":"up regulation of haem catalase activity","type":"narrow"},{"name":"up regulation of heme catalase activity","type":"narrow"},{"name":"up regulation of hydrogen-peroxide:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"up regulation of manganese catalase activity","type":"narrow"},{"name":"up regulation of optidase activity","type":"exact"},{"name":"up-regulation of CAT","type":"related"},{"name":"up-regulation of bacterial catalase-peroxidase activity","type":"narrow"},{"name":"up-regulation of caperase activity","type":"exact"},{"name":"up-regulation of catalase activity","type":"exact"},{"name":"up-regulation of catalase reaction","type":"exact"},{"name":"up-regulation of catalase-peroxidase activity","type":"exact"},{"name":"up-regulation of equilase activity","type":"exact"},{"name":"up-regulation of haem catalase activity","type":"narrow"},{"name":"up-regulation of heme catalase activity","type":"narrow"},{"name":"up-regulation of hydrogen-peroxide:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"up-regulation of manganese catalase activity","type":"narrow"},{"name":"up-regulation of optidase activity","type":"exact"},{"name":"upregulation of CAT","type":"related"},{"name":"upregulation of bacterial catalase-peroxidase activity","type":"narrow"},{"name":"upregulation of caperase activity","type":"exact"},{"name":"upregulation of catalase activity","type":"exact"},{"name":"upregulation of catalase reaction","type":"exact"},{"name":"upregulation of catalase-peroxidase activity","type":"exact"},{"name":"upregulation of equilase activity","type":"exact"},{"name":"upregulation of haem catalase activity","type":"narrow"},{"name":"upregulation of heme catalase activity","type":"narrow"},{"name":"upregulation of hydrogen-peroxide:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"upregulation of manganese catalase activity","type":"narrow"},{"name":"upregulation of optidase activity","type":"exact"}],"termid":"GO:1902553"}


id: PBO:0005335
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.3.1.1","termid":"PBO:0005335"}


id: PBO:0060370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotilin","termid":"PBO:0060370"}


id: PBO:0042036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 89","termid":"PBO:0042036"}


id: GO:0060251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glial cell proliferation.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"glial cell proliferation","termid":"GO:0014009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of glial cell proliferation","termid":"GO:0060251"}


id: PBO:0046905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 25 member E, pseudogene","termid":"PBO:0046905"}


id: PBO:0075328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis and oogenesis specific basic helix-loop-helix 1","termid":"PBO:0075328"}


id: PBO:0075750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF protein kinase 2 pseudogene","termid":"PBO:0075750"}


id: PBO:0067058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 79, pseudogene","termid":"PBO:0067058"}


id: PBO:0086634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; proposed to be involved in resistance to streptozotocin and camptothecin","termid":"PBO:0086634"}


id: PBO:0086872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative sterol transfer protein; localizes to puncta in the cortical ER; probable role in retrograde transport of sterols from the plasma membrane to the ER; one of six StART-like domain-containing proteins in yeast that may be involved in sterol transfer between intracellular membranes; conserved across eukaryotes; contains GRAM, StART-like (VASt) and two PH-like domains","termid":"PBO:0086872"}


id: PBO:0080971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 8 opposite strand","termid":"PBO:0080971"}


id: PBO:0071275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL24 pseudogene 9","termid":"PBO:0071275"}


id: PBO:0062000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily G member 3","termid":"PBO:0062000"}


id: PBO:0034616
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_meiotic_recombination_double-strand_break_repair","termid":"PBO:0034616"}


id: FYPO:0004678
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature, polyadenylated 25S rRNA measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased polyadenylated rRNA level","termid":"FYPO:0008091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"increased polyadenylated 25S rRNA level","synonyms":[{"name":"increased mature polyadenylated 25S rRNA transcript level","type":"exact"},{"name":"increased polyadenylated 25S rRNA accumulation","type":"related"},{"name":"increased polyadenylated 25S rRNA level during mitotic cell cycle","type":"related"},{"name":"increased polyadenylated 25S rRNA level during vegetative growth","type":"exact"},{"name":"increased polyadenylated 25S rRNA transcript level","type":"exact"}],"termid":"FYPO:0004678"}


id: PBO:0030578
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vacuolar_alanine_level","termid":"PBO:0030578"}


id: GO:1990396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The error-free repair of a single-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule.","definition_xrefs":["GOC:bhm","PMID:24339919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single strand break repair","termid":"GO:0000012"},{"relation_name":"is_a","term_name":"recombinational repair","termid":"GO:0000725"},{"relation_name":"is_a","term_name":"error-free postreplication DNA repair","termid":"GO:0042275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"single-strand break repair via homologous recombination","termid":"GO:1990396"}


id: GO:2000549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dendritic cell dendrite assembly.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120034"},{"relation_name":"is_a","term_name":"regulation of dendritic cell dendrite assembly","termid":"GO:2000547"},{"relation_name":"positively_regulates","term_name":"dendritic cell dendrite assembly","termid":"GO:0097026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of dendritic cell dendrite assembly","synonyms":[{"name":"positive regulation of dendritic extension","type":"related"}],"termid":"GO:2000549"}


id: GO:0102051
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-acetate + L-tryptophan + ATP(4-) = H+ + indole-3-acetyl-tryptophan + AMP(2-) + diphosphoric acid.","definition_xrefs":["EC:6.3.-.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"indole-3-acetyl-tryptophan synthetase activity","secondary_identifiers":["MetaCyc:RXN-10433"],"termid":"GO:0102051"}


id: FYPO:0003000
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cytokinesis phenotype observed in the vegetative growth phase of the life cycle in which the assembly of actin filaments from actin monomers does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly","termid":"FYPO:0000336"},{"relation_name":"is_a","term_name":"abolished actin filament organization","termid":"FYPO:0001010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished actin filament polymerization","synonyms":[{"name":"abolished actin filament polymerisation","type":"exact"},{"name":"abolished actin filament polymerization during mitotic cell cycle","type":"related"},{"name":"abolished actin filament polymerization during vegetative growth","type":"exact"},{"name":"actin filament polymerization abolished","type":"exact"}],"termid":"FYPO:0003000"}


id: PBO:0083746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential component of the TIM23 complex; acts as receptor for the translocase of the inner mitochondrial membrane (TIM23) complex guiding incoming precursors from the TOM complex; may control the gating of the Tim23p-Tim17p channel","termid":"PBO:0083746"}


id: GO:0072103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the glomerulus vasculature are generated and organized. The glomerulus vasculature is composed of the tubule structures that carry blood or lymph in the glomerulus.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel morphogenesis","termid":"GO:0048514"},{"relation_name":"is_a","term_name":"kidney vasculature morphogenesis","termid":"GO:0061439"},{"relation_name":"part_of","term_name":"glomerulus vasculature development","termid":"GO:0072012"},{"relation_name":"part_of","term_name":"glomerulus morphogenesis","termid":"GO:0072102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerulus vasculature morphogenesis","termid":"GO:0072103"}


id: GO:0052440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of symbiont ethylene-mediated signal transduction pathways during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of defense-related symbiont ethylene-mediated signal transduction pathway (obsolete GO:0052440)","synonyms":[{"name":"modulation by organism of defense-related symbiont ethylene-mediated signal transduction pathway","type":"exact"}],"termid":"GO:0052440"}


id: GO:0031998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fatty acid bbeta-oxidation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular catabolic process","termid":"GO:0031329"},{"relation_name":"is_a","term_name":"regulation of fatty acid oxidation","termid":"GO:0046320"},{"relation_name":"is_a","term_name":"regulation of lipid catabolic process","termid":"GO:0050994"},{"relation_name":"regulates","term_name":"fatty acid beta-oxidation","termid":"GO:0006635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"regulation of fatty acid beta-oxidation","termid":"GO:0031998"}


id: PBO:0065758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrin and HIN domain family member 1","termid":"PBO:0065758"}


id: GO:0048684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of collateral sprouting of an intact axon as a result of injury to an axon.","definition_xrefs":["GOC:jid","GOC:dph","GOC:dgh","GOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of collateral sprouting","termid":"GO:0048672"},{"relation_name":"is_a","term_name":"positive regulation of axon regeneration","termid":"GO:0048680"},{"relation_name":"is_a","term_name":"regulation of collateral sprouting of intact axon in response to injury","termid":"GO:0048683"},{"relation_name":"positively_regulates","term_name":"collateral sprouting of intact axon in response to injury","termid":"GO:0048673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of collateral sprouting of intact axon in response to injury","synonyms":[{"name":"activation of collateral sprouting of intact axon in response to injury","type":"narrow"},{"name":"stimulation of collateral sprouting of intact axon in response to injury","type":"narrow"},{"name":"up regulation of collateral sprouting of intact axon in response to injury","type":"exact"},{"name":"up-regulation of collateral sprouting of intact axon in response to injury","type":"exact"},{"name":"upregulation of collateral sprouting of intact axon in response to injury","type":"exact"}],"termid":"GO:0048684"}


id: FYPO:0000245
data:
  {"alleles_by_uniquename":{"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115618],"is_not":false,"summary":null,"term":"FYPO:0000245"},{"annotations":[115504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005231"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable after entering stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02527":null,"SJAG_04312":null},"genotype_count":2,"genotypes_by_uniquename":{"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"loss of viability in stationary phase","references_by_uniquename":{"PMID:27678009":null,"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_02527","SJAG_04312"],"single_locus_genotype_uniquenames":["pka1delta","lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown"],"synonyms":[{"name":"decreased chronological lifespan","type":"related"},{"name":"decreased viability in stationary phase","type":"exact"},{"name":"growth defect, required for stationary phase","type":"related"},{"name":"increased chronological cell aging","type":"related"},{"name":"loss of cell population viability in stationary phase","type":"exact"},{"name":"reduced viability in stationary phase","type":"exact"}],"termid":"FYPO:0000245","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000245":null,"FYPO:0005231":null}}


id: PBO:0091488
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ErMes Regulator","termid":"PBO:0091488"}


id: PBO:0040557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1","termid":"PBO:0040557"}


id: GO:0072329
data:
  {"annotated_genes":["SJAG_02763","SJAG_01432","SJAG_00281","SJAG_00706","SJAG_00633","SJAG_00413","SJAG_03804","SJAG_04570","SJAG_03852"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94249,107637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046177"},{"annotations":[107894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001561"},{"annotations":[72184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006635"},{"annotations":[87509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009062"},{"annotations":[97087,101132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009436"},{"annotations":[107829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903457"},{"annotations":[109823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042758"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of monocarboxylic acids, any organic acid containing one carboxyl (-COOH) group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00281":null,"SJAG_00413":null,"SJAG_00633":null,"SJAG_00706":null,"SJAG_01432":null,"SJAG_02763":null,"SJAG_03804":null,"SJAG_03852":null,"SJAG_04570":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"monocarboxylic acid catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0072329","terms_by_termid":{"GO:0001561":null,"GO:0006635":null,"GO:0009062":null,"GO:0009436":null,"GO:0042758":null,"GO:0046177":null,"GO:1903457":null}}


id: PBO:0028323
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_mitochondrion","termid":"PBO:0028323"}


id: GO:0008188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a neuropeptide to initiate a change in cell activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"neuropeptide receptor activity","termid":"GO:0008188"}


id: PBO:0076563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3D","termid":"PBO:0076563"}


id: GO:0090134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of epithelial cells from one site to another that contributes to the migration of mesendodermal tissue.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in gastrulation","termid":"GO:0042074"},{"relation_name":"part_of","term_name":"mesendoderm migration","termid":"GO:0090133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in mesendoderm migration","termid":"GO:0090134"}


id: GO:1990669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around an ERGIC-derived vesicle to the lipid bilayer membrane of the ER. Such vesicles include COPI-coated transport vesicles involved in retrograde transport.","definition_xrefs":["PMID:16038056","PMID:24119662","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion with endoplasmic reticulum","termid":"GO:0048279"},{"relation_name":"part_of","term_name":"retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum","termid":"GO:0006890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810","GO:0061024"],"is_obsolete":false,"name":"endoplasmic reticulum-Golgi intermediate compartment (ERGIC) derived vesicle fusion with endoplasmic reticulum membrane","synonyms":[{"name":"ER-Golgi intermediate compartment derived vesicle fusion with ER membrane","type":"exact"},{"name":"endoplasmic reticulum-Golgi intermediate compartment (ERGIC) derived vesicle fusion with ER membrane","type":"exact"}],"termid":"GO:1990669"}


id: PBO:0012239
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"staurosporine-related protein kinase","termid":"PBO:0012239"}


id: PR:P22774
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A stress-70 protein, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock 70 kDa protein, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.11","secondary_identifiers":["UniProtKB:P22774"],"synonyms":[{"name":"Spom972h-HSPA9","type":"exact"}],"termid":"PR:P22774"}


id: PBO:0072232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 7","termid":"PBO:0072232"}


id: PATO:0002445
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being twisted or turned.","definition_xrefs":["freedictionary:freedictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"torsioned","synonyms":[{"name":"twisted","type":"exact"}],"termid":"PATO:0002445"}


id: PR:Q9UTR7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mcp3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTR7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic coiled-coil protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.04c","synonyms":[{"name":"Spom972h-mcp3","type":"exact"},{"name":"meiotically up-regulated gene 7 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTR7"}


id: PBO:0039158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 4 pseudogene 5","termid":"PBO:0039158"}


id: PBO:0071735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 33","termid":"PBO:0071735"}


id: PR:O14210
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ies2 gene.","definition_xrefs":["UniProtKB:O14210","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80 complex subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.05c","synonyms":[{"name":"Spom972h-ies2","type":"exact"}],"termid":"PR:O14210"}


id: GO:0100060
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any DNA binding that negatively regulates SREBP signaling pathway.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of SREBP signaling pathway by DNA binding (obsolete GO:0100060)","termid":"GO:0100060"}


id: PBO:0110973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4504 family protein, human C1orf74 ortholog, implicated in transcription or signalling, possibly phosphate starvation response","termid":"PBO:0110973"}


id: PBO:0078429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (GCC) 6-1","termid":"PBO:0078429"}


id: PBO:0029661
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_deadenylation-independent_decapping_of_nuclear-transcribed_mRNA","termid":"PBO:0029661"}


id: MOD:01001
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that inserts or replaces a residue with a 2-aminoisobutyric acid.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unnatural residue","termid":"MOD:00850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-aminoisobutyric acid residue (Aib)","synonyms":[{"name":"2-amino-2-methylpropanoic acid","type":"exact"},{"name":"2-amino-2-methylpropionic acid","type":"exact"},{"name":"2-methylalanine","type":"exact"},{"name":"Aib","type":"exact"},{"name":"alpha,alpha-dimethylglycine","type":"exact"},{"name":"alpha-aminoisobutyric acid","type":"exact"},{"name":"alpha-methylalanine","type":"exact"}],"termid":"MOD:01001"}


id: GO:0009381
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid at sites flanking regions of damaged DNA to which the Uvr ABC excinuclease complexes bind.","definition_xrefs":["PMID:15192705","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity","termid":"GO:0004520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003674","GO:0140097","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"excinuclease ABC activity","termid":"GO:0009381"}


id: GO:0102799
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + a glucosinolate = alpha-D-glucose + a thiohydroximate-O-sulfate. Glucosinolates are a subclass of thioglucosides.","definition_xrefs":["EC:3.2.1.147","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"glucosinolate glucohydrolase activity","secondary_identifiers":["MetaCyc:RXN-8134"],"termid":"GO:0102799"}


id: FYPO:0000545
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein modification is decreased. All modifications may be affected, or only modifications of a certain type, or on specific proteins, or even specific sites within specific proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"},{"relation_name":"is_a","term_name":"decreased protein modification","termid":"FYPO:0002498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein modification during vegetative growth","synonyms":[{"name":"decreased protein modification during mitotic cell cycle","type":"related"},{"name":"decreased protein/peptide modification during vegetative growth","type":"exact"},{"name":"reduced protein modification during vegetative growth","type":"exact"}],"termid":"FYPO:0000545"}


id: PBO:0064299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polo like kinase 2","termid":"PBO:0064299"}


id: GO:1900271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of long-term synaptic potentiation.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic plasticity","termid":"GO:0048167"},{"relation_name":"regulates","term_name":"long-term synaptic potentiation","termid":"GO:0060291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of long-term synaptic potentiation","synonyms":[{"name":"regulation of LTP","type":"related"},{"name":"regulation of long-term potentiation","type":"broad"}],"termid":"GO:1900271"}


