# terms

id: GO:1990404
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: amino acyl-[protein] + NAD+ = H+ + (ADP-D-ribosyl)-amino acyl-[protein] + nicotinamide.","definition_xrefs":["PMID:1899243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0140096","GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"NAD+-protein ADP-ribosyltransferase activity","secondary_identifiers":["Wikipedia:ADP-ribosylation"],"synonyms":[{"name":"NAD+ ADP-ribosyltransferase activity","type":"broad"},{"name":"protein ADP-ribosylase activity","type":"exact"},{"name":"protein ADP-ribosyltransferase activity","type":"broad"},{"name":"ribosylase activity","type":"broad"}],"termid":"GO:1990404"}


id: PBO:0091895
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterologously expressed Wtf4 poison is toxic to S. cerevisiae vegetative cells, and rescued by Wtf4 antidote","termid":"PBO:0091895"}


id: GO:0044217
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any constituent part of a secondary organism with which the first organism is interacting.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"other organism part","termid":"GO:0044217"}


id: PBO:0045091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLX2 divergent transcript","termid":"PBO:0045091"}


id: PBO:0048120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucosyltransferase 1 (H blood group)","termid":"PBO:0048120"}


id: PBO:0086696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; localized to the membranes; gene expression regulated by copper levels","termid":"PBO:0086696"}


id: GO:0038160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the C-X-C chemokine CXCL12 to a C-X-C chemokine type 4 receptor (CXCR4) on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine (C-X-C motif) ligand 12 signaling pathway","termid":"GO:0038146"},{"relation_name":"is_a","term_name":"C-X-C chemokine receptor CXCR4 signaling pathway","termid":"GO:0038159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"CXCL12-activated CXCR4 signaling pathway","synonyms":[{"name":"CXCL12-activated CXCR4 signalling pathway","type":"exact"}],"termid":"GO:0038160"}


id: PBO:0060311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYLK antisense RNA 1","termid":"PBO:0060311"}


id: PBO:0077888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPRG1 antisense RNA 2","termid":"PBO:0077888"}


id: PBO:0058716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6844","termid":"PBO:0058716"}


id: PBO:0060798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit S5 pseudogene 4","termid":"PBO:0060798"}


id: PBO:0082724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the RAM signaling network; is involved in regulation of Ace2p activity and cellular morphogenesis; interacts with Sog2p; allosterically activates Kic1p; localizes to sites of polarized growth during budding and during the mating response","termid":"PBO:0082724"}


id: GO:0008940
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nitrite + acceptor = nitrate + reduced acceptor.","definition_xrefs":["RHEA:21068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors","termid":"GO:0016661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"nitrate reductase activity","synonyms":[{"name":"nitrate reductase (acceptor)","type":"related"},{"name":"nitrite:(acceptor) oxidoreductase","type":"related"},{"name":"nitrite:acceptor oxidoreductase","type":"related"},{"name":"respiratory nitrate reductase activity","type":"narrow"}],"termid":"GO:0008940"}


id: PBO:0085461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Predicted membrane protein required for lumenal ER protein retention; recycles inorganic phosphate byproduct of glycosylation from ER and Golgi; involved in recycling of early Golgi glycosyltransferases from late to early Golgi compartments; mutants secrete the endogenous ER protein, BiP (Kar2p)","termid":"PBO:0085461"}


id: GO:0035037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An endocytosis process that results in penetration of the egg shell through the micropyle (a specialized anterior opening in the vitelline envelope) and entry of the entire sperm, including the surrounding plasma membrane and the sperm tail, into the egg cytoplasm. This step in fertilization is seen in Drosophila, where a plasma membrane fusion event between the sperm and the egg does not occur.","definition_xrefs":["GOC:bf","PMID:9630751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytosis","termid":"GO:0006897"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192","GO:0051179"],"is_obsolete":false,"name":"sperm entry","termid":"GO:0035037"}


id: PR:O14022
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cta5 gene.","definition_xrefs":["UniProtKB:O14022","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation-transporting ATPase 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.19c","synonyms":[{"name":"Spom972h-cta5","type":"exact"}],"termid":"PR:O14022"}


id: PBO:0003218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V0 subunit e (predicted)","termid":"PBO:0003218"}


id: PATO:0002046
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being away from or on the opposite side of the central axis.","definition_xrefs":["medical-dictionary:http://medical-dictionary.thefreedictionary.com/abaxial"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abaxial to","termid":"PATO:0002046"}


id: PBO:0044905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desumoylating isopeptidase 2","termid":"PBO:0044905"}


id: GO:0072309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism retains a population of mesenchymal stem cells that contributes to the shaping of a nephron in the metanephros. A mesenchymal stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized mesenchymal cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal stem cell maintenance involved in nephron morphogenesis","termid":"GO:0072038"},{"relation_name":"part_of","term_name":"metanephric nephron morphogenesis","termid":"GO:0072273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal stem cell maintenance involved in metanephric nephron morphogenesis","termid":"GO:0072309"}


id: PBO:0086477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086477"}


id: PBO:0113305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in establishment of cell polarity and bud emergence; regulates filamentous-growth mitogen-activated protein kinase (MAPK) pathway; interacts with the Rho1p small GTP-binding protein, the pleckstrin homology (PH) domain of Cdc24p, and with the Rho-type GTPase Cdc42p; stabilizes Cdc42p levels, resulting in elevated fMAPK pathway signaling; involved in maintenance of proper telomere length","termid":"PBO:0113305"}


id: PBO:0072498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 27","termid":"PBO:0072498"}


id: PBO:0060439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NACA pseudogene 8","termid":"PBO:0060439"}


id: GO:0009593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a chemical stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of stimulus","termid":"GO:0051606"},{"relation_name":"part_of","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of chemical stimulus","synonyms":[{"name":"chemoperception","type":"exact"},{"name":"chemoreception","type":"related"},{"name":"detection of chemical substance","type":"exact"},{"name":"perception of chemical stimulus","type":"related"},{"name":"perception of chemical substance","type":"related"}],"termid":"GO:0009593"}


id: PBO:0066370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol dehydrogenase 13","termid":"PBO:0066370"}


id: PBO:0078491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 10-1","termid":"PBO:0078491"}


id: SO:0001683
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence motif is a nucleotide or amino-acid sequence pattern that may have biological significance.","direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_motif","secondary_identifiers":["http://en.wikipedia.org/wiki/Sequence_motif"],"synonyms":[{"name":"sequence motif","type":"related"}],"termid":"SO:0001683"}


id: GO:0034446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process that results in flattening of a cell as a consequence of its adhesion to a substrate.","definition_xrefs":["GOC:mah","GOC:pf","PMID:17050732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate adhesion","termid":"GO:0031589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"substrate adhesion-dependent cell spreading","synonyms":[{"name":"cell spreading during cell substrate adhesion","type":"exact"},{"name":"substrate adhesion dependent cell spreading","type":"exact"}],"termid":"GO:0034446"}


id: PBO:0001614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase (predicted)","termid":"PBO:0001614"}


id: GO:2000976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of transcription from RNA polymerase II promoter that is involved in detection of glucose.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in detection of glucose (obsolete GO:2000976)","synonyms":[{"name":"global transcription regulation from Pol II promoter involved in detection of glucose","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in glucose detection","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in glucose perception","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in glucose sensing","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in detection of glucose","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in glucose detection","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in glucose perception","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in glucose sensing","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in detection of glucose","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in glucose detection","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in glucose perception","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in glucose sensing","type":"related"},{"name":"regulation of transcription from Pol II promoter involved in detection of glucose","type":"exact"},{"name":"regulation of transcription from Pol II promoter involved in glucose detection","type":"exact"},{"name":"regulation of transcription from Pol II promoter involved in glucose perception","type":"related"},{"name":"regulation of transcription from Pol II promoter involved in glucose sensing","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter involved in glucose detection","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter involved in glucose perception","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter involved in glucose sensing","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in detection of glucose","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in glucose detection","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in glucose perception","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in glucose sensing","type":"related"}],"termid":"GO:2000976"}


id: GO:0032345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving aldosterone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"regulation of aldosterone metabolic process","termid":"GO:0032344"},{"relation_name":"is_a","term_name":"negative regulation of hormone metabolic process","termid":"GO:0032351"},{"relation_name":"is_a","term_name":"negative regulation of steroid metabolic process","termid":"GO:0045939"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"aldosterone metabolic process","termid":"GO:0032341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of aldosterone metabolic process","synonyms":[{"name":"down regulation of aldosterone metabolic process","type":"exact"},{"name":"down-regulation of aldosterone metabolic process","type":"exact"},{"name":"downregulation of aldosterone metabolic process","type":"exact"},{"name":"inhibition of aldosterone metabolic process","type":"narrow"},{"name":"negative regulation of aldosterone metabolism","type":"exact"}],"termid":"GO:0032345"}


id: PR:O43052
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rga1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho-type GTPase-activating protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3F6.05","synonyms":[{"name":"Spom972h-rga1","type":"exact"}],"termid":"PR:O43052"}


id: PBO:0047208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 220 member B, pseudogene","termid":"PBO:0047208"}


id: PBO:0089670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial RNA 5'-end processing Pet127","termid":"PBO:0089670"}


id: PBO:0086507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein kinase, potentially phosphorylated by Cdc28p; interacts with ribosome biogenesis factors, Cka2, Gus1 and Arc1; protein abundance increases in response to DNA replication stress","termid":"PBO:0086507"}


id: PBO:0067947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 249","termid":"PBO:0067947"}


id: MOD:00692
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein crosslink modification that is not chemically categorized.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncategorized crosslinked residues","termid":"MOD:00692"}


id: FYPO:0001665
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of cyclic AMP measured in a cell is lower than normal during a cellular response to glucose stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular cAMP level","termid":"FYPO:0001660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular cAMP level during cellular response to glucose stimulus","synonyms":[{"name":"decreased cAMP accumulation during cellular response to glucose stimulus","type":"related"},{"name":"decreased cellular cAMP level in response to glucose stimulus","type":"exact"},{"name":"decreased cellular cyclic AMP level during cellular response to glucose stimulus","type":"exact"},{"name":"reduced cellular cAMP level during cellular response to glucose stimulus","type":"exact"}],"termid":"FYPO:0001665"}


id: GO:0044409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Entry of a symbiont into the body, tissues, or cells of a host organism as part of the symbiont life cycle. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interaction with host","termid":"GO:0051701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont entry into host","secondary_identifiers":["GO:0044411","GO:0075052","GO:0085027","GO:0030260","GO:0051830","GO:0051828","GO:0085028","GO:0051806"],"synonyms":[{"name":"entry into cell of other organism during symbiotic interaction","type":"narrow"},{"name":"entry into cell of other organism involved in symbiotic interaction","type":"related"},{"name":"entry into host","type":"exact"},{"name":"entry into host cell via penetration peg","type":"narrow"},{"name":"entry into host through host barriers","type":"related"},{"name":"entry into host via a specialized structure during symbiotic interaction","type":"narrow"},{"name":"entry into host via enzymatic degradation of host anatomical structure","type":"narrow"},{"name":"entry into host via enzymatic degradation of host cuticle","type":"narrow"},{"name":"entry into other organism during symbiotic interaction","type":"related"},{"name":"entry into other organism involved in symbiotic interaction","type":"related"},{"name":"host invasion","type":"exact"},{"name":"host penetration","type":"exact"},{"name":"invasion into host","type":"exact"},{"name":"invasion into other organism","type":"related"},{"name":"invasion of host","type":"exact"},{"name":"invasion of other organism","type":"related"},{"name":"invasive growth","type":"related"},{"name":"other organism invasion","type":"related"},{"name":"penetration into host","type":"exact"},{"name":"penetration into host via a specialized structure","type":"narrow"},{"name":"penetration into host via a specialized structure during symbiotic interaction","type":"narrow"}],"termid":"GO:0044409"}


id: PBO:0068357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 138 pseudogene 2","termid":"PBO:0068357"}


id: PBO:0029075
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_level_of_sumoylated_protein_in_cell","termid":"PBO:0029075"}


id: PBO:0056283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase beta like","termid":"PBO:0056283"}


id: GO:0070699
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type II activin receptor.","definition_xrefs":["GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activin receptor binding","termid":"GO:0070697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type II activin receptor binding","termid":"GO:0070699"}


id: PBO:0065482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome activator subunit 2 pseudogene 1","termid":"PBO:0065482"}


id: PBO:0091707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial membrane CH-OH group oxidoreductase, human RTN4IP1 ortholog, implicated in mitochondrial organization or tethering","termid":"PBO:0091707"}


id: PR:Q9UUG8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tup12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUG8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional repressor tup12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC630.14c","synonyms":[{"name":"Spom972h-tup12","type":"exact"}],"termid":"PR:Q9UUG8"}


id: PBO:0005312
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human COQ10A","termid":"PBO:0005312"}


id: GO:0001733
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + a galactosylceramide = adenosine 3',5'-bisphosphate + a galactosylceramidesulfate.","definition_xrefs":["EC:2.8.2.11","PMID:10727929","RHEA:20613"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose 3-O-sulfotransferase activity","termid":"GO:0050694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016782","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"galactosylceramide sulfotransferase activity","secondary_identifiers":["MetaCyc:GALACTOSYLCERAMIDE-SULFOTRANSFERASE-RXN","Reactome:R-HSA-9844587"],"synonyms":[{"name":"3'-phosphoadenosine-5'-phosphosulfate-cerebroside sulfotransferase activity","type":"related"},{"name":"3'-phosphoadenylyl-sulfate:galactosylceramide 3'-sulfotransferase activity","type":"related"},{"name":"GSase","type":"related"},{"name":"cerebroside sulfotransferase activity","type":"exact"},{"name":"galactocerebroside sulfotransferase activity","type":"related"},{"name":"galactolipid sulfotransferase activity","type":"related"},{"name":"galactosylceramide sulphotransferase activity","type":"exact"},{"name":"glycolipid sulfotransferase activity","type":"related"},{"name":"glycosphingolipid sulfotransferase activity","type":"related"}],"termid":"GO:0001733"}


id: PBO:0045587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 1","termid":"PBO:0045587"}


id: PBO:0082559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ceramide synthase component; involved in synthesis of ceramide from C26(acyl)-coenzyme A and dihydrosphingosine or phytosphingosine, functionally equivalent to Lac1p; forms ER foci upon DNA replication stress; homolog of human CERS2, a tumor metastasis suppressor gene whose silencing enhances invasion/metastasis of prostate cancer cells; LAG1 has a paralog, LAC1, that arose from the whole genome duplication","termid":"PBO:0082559"}


id: PBO:0067317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 403, pseudogene","termid":"PBO:0067317"}


id: PBO:0005697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex associated protein","termid":"PBO:0005697"}


id: PBO:0078292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 25-1","termid":"PBO:0078292"}


id: PBO:0090231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med9","termid":"PBO:0090231"}


id: PBO:0003715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein Pop3","termid":"PBO:0003715"}


id: PBO:0056726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MER proto-oncogene, tyrosine kinase","termid":"PBO:0056726"}


id: PBO:0085143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein that mediates homolog segregation during meiosis I; forms a complex with Lrs4p and then Mam1p at kinetochores; required for condensin recruitment to the replication fork barrier site and rDNA repeat segregation","termid":"PBO:0085143"}


id: GO:0033379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protease is maintained in a secretory granule in a T cell and prevented from moving elsewhere.","definition_xrefs":["GOC:tb","GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein location in T cell secretory granule","termid":"GO:0033377"},{"relation_name":"part_of","term_name":"protease localization to T cell secretory granule","termid":"GO:0033375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of protease location in T cell secretory granule","synonyms":[{"name":"maintenance of protease localization in T cell secretory granule","type":"related"},{"name":"maintenance of protease localization in T lymphocyte secretory granule","type":"exact"},{"name":"maintenance of protease localization in T-cell secretory granule","type":"exact"},{"name":"maintenance of protease localization in T-lymphocyte secretory granule","type":"exact"}],"termid":"GO:0033379"}


id: PBO:0057155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 302a","termid":"PBO:0057155"}


id: PBO:0057304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 515-1","termid":"PBO:0057304"}


id: FYPO:0005619
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of sumoylated protein measured in the cell is higher than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"increased level of sumoylated protein in cell","synonyms":[{"name":"increased accumulation of sumoylated protein in cell","type":"related"},{"name":"increased level of sumoylated protein in cell during mitotic cell cycle","type":"related"},{"name":"increased level of sumoylated protein in cell during vegetative growth","type":"exact"},{"name":"increased sumoylated protein level during vegetative growth","type":"exact"}],"termid":"FYPO:0005619"}


id: GO:1901744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 2-deoxystreptamine.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"2-deoxystreptamine metabolic process","termid":"GO:1901742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"2-deoxystreptamine biosynthetic process","synonyms":[{"name":"2-deoxystreptamine anabolism","type":"exact"},{"name":"2-deoxystreptamine biosynthesis","type":"exact"},{"name":"2-deoxystreptamine formation","type":"exact"},{"name":"2-deoxystreptamine synthesis","type":"exact"}],"termid":"GO:1901744"}


id: PBO:0002260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S15 (predicted)","termid":"PBO:0002260"}


id: PBO:0084346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Largest subunit of the origin recognition complex; involved in directing DNA replication by binding to replication origins; also involved in transcriptional silencing; exhibits ATPase activity; ORC1 has a paralog, SIR3, that arose from the whole genome duplication","termid":"PBO:0084346"}


id: PBO:0054857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2271","termid":"PBO:0054857"}


id: SO:0001599
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that changes the resulting polypeptide structure.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational_product_function_variant","termid":"SO:0001539"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3D_polypeptide_structure_variant","synonyms":[{"name":"3D polypeptide structure variant","type":"exact"}],"termid":"SO:0001599"}


id: PBO:0048370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein and VPS9 domains 1","termid":"PBO:0048370"}


id: GO:0030837
data:
  {"annotated_genes":["SJAG_01894","SJAG_01993","SJAG_04982","SJAG_00279","SJAG_02700"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88371,84326,94955,110384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[93786,110387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042989"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of actin polymerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament polymerization","termid":"GO:0030833"},{"relation_name":"is_a","term_name":"negative regulation of protein polymerization","termid":"GO:0032272"},{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"is_a","term_name":"negative regulation of supramolecular fiber organization","termid":"GO:1902904"},{"relation_name":"negatively_regulates","term_name":"actin filament polymerization","termid":"GO:0030041"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02700":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0065003","GO:0030036","GO:0044085"],"is_obsolete":false,"name":"negative regulation of actin filament polymerization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of actin filament polymerization","type":"exact"},{"name":"down-regulation of actin filament polymerization","type":"exact"},{"name":"downregulation of actin filament polymerization","type":"exact"},{"name":"inhibition of actin filament polymerization","type":"narrow"},{"name":"negative regulation of actin polymerization","type":"exact"},{"name":"negative regulation of actin polymerization and/or depolymerization","type":"broad"}],"termid":"GO:0030837","terms_by_termid":{"GO:0042989":null,"GO:0051016":null}}


id: PATO:0001626
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of whether the bearer has enough functionality.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functionality","termid":"PATO:0001509"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sufficiency","synonyms":[{"name":"adequacy","type":"related"}],"termid":"PATO:0001626"}


id: GO:0060633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of a process involved in starting transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dph","GOC:txnOH","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transcription by RNA polymerase II","termid":"GO:0000122"},{"relation_name":"is_a","term_name":"regulation of transcription initiation by RNA polymerase II","termid":"GO:0060260"},{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription initiation","termid":"GO:2000143"},{"relation_name":"negatively_regulates","term_name":"transcription initiation at RNA polymerase II promoter","termid":"GO:0006367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0006355","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of transcription initiation by RNA polymerase II","synonyms":[{"name":"negative regulation of transcription initiation from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0060633"}


id: PBO:0039075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate O-acyltransferase 3","termid":"PBO:0039075"}


id: GO:0046845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Allocation of a set number of cells to each primary branch in an open tracheal system, prior to the onset of cell migration. This establishes different domains of cells within the tracheal placode.","definition_xrefs":["GOC:mtg_sensu","PMID:10684581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"open tracheal system development","termid":"GO:0007424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branched duct epithelial cell fate determination, open tracheal system","synonyms":[{"name":"branch cell fate determination","type":"broad"}],"termid":"GO:0046845"}


id: GO:2000712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of maintenance of meiotic sister chromatid cohesion along the chromosome arms.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of maintenance of meiotic sister chromatid cohesion, arms (obsolete GO:2000712)","synonyms":[{"name":"regulation of maintenance of meiotic sister chromatin cohesion along arms","type":"exact"},{"name":"regulation of maintenance of sister chromatin cohesion along arms at meiosis I","type":"exact"}],"termid":"GO:2000712"}


id: PBO:0080581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 5B","termid":"PBO:0080581"}


id: PBO:0030864
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization","termid":"PBO:0030864"}


id: PBO:0057896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3199-1","termid":"PBO:0057896"}


id: PBO:0034597
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_onset_of_metaphase/anaphase_transition_of_meiosis_I","termid":"PBO:0034597"}


id: PBO:0086623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; similar to the petunia WD repeat protein an11; overexpression causes a cell cycle delay or arrest","termid":"PBO:0086623"}


id: GO:0055072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of iron ions within an organism or cell.","definition_xrefs":["GOC:mah","GOC:jid","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete iron ion homeostasis (obsolete GO:0055072)","synonyms":[{"name":"iron homeostasis","type":"broad"}],"termid":"GO:0055072"}


id: PR:Q10098
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC15F9.01c gene.","definition_xrefs":["UniProtKB:Q10098","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C15F9.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15F9.01c","synonyms":[{"name":"Spom972h-SPAC15F9.01c","type":"exact"}],"termid":"PR:Q10098"}


id: GO:0030707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that occurs during oogenesis involving the ovarian follicle cells, somatic cells which surround the germ cells of an ovary. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","PMID:10822261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell development","termid":"GO:0002064"},{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"follicle cell of egg chamber development","termid":"GO:0030707"}


id: GO:0070057
data:
  {"annotated_genes":["SJAG_00405","SJAG_03536","SJAG_04080"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[98981,101332,114593],"is_not":false,"summary":null,"term":"GO:0070057"}]},"cv_name":"cellular_component","definition":"The region of the prospore membrane to which the spindle pole body (SPB) is anchored; the prospore membrane extends from the SPB attachment site to surround the spore nucleus.","definition_xrefs":["PMID:14702385","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"prospore membrane","termid":"GO:0005628"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00405":null,"SJAG_03536":null,"SJAG_04080":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005628"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005628","GO:0005575"],"is_obsolete":false,"name":"prospore membrane spindle pole body attachment site","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"forespore membrane SPB attachment site","type":"exact"},{"name":"forespore membrane spindle pole body attachment site","type":"exact"},{"name":"prospore membrane SPB attachment site","type":"exact"}],"termid":"GO:0070057","terms_by_termid":{"GO:0070057":null}}


id: GO:0071962
data:
  {"annotated_genes":["SJAG_01601"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95188],"is_not":false,"summary":null,"term":"GO:0071962"}]},"cv_name":"biological_process","definition":"The cell cycle process in which centromeres of sister chromatids are joined during mitosis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic sister chromatid cohesion","termid":"GO:0007064"},{"relation_name":"is_a","term_name":"centromeric sister chromatid cohesion","termid":"GO:0070601"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01601":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"mitotic sister chromatid cohesion, centromeric","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"centromeric mitotic sister chromatin cohesion","type":"exact"},{"name":"mitotic sister chromatid cohesion at centromere","type":"exact"},{"name":"sister chromatid cohesion at centromere at mitosis","type":"exact"}],"termid":"GO:0071962","terms_by_termid":{"GO:0071962":null}}


id: PBO:0089281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall 1,3-beta-glucanosyltransferase Gas2","termid":"PBO:0089281"}


id: PBO:0029207
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_mitotic_spindle_elongation","termid":"PBO:0029207"}


id: FYPO:0003751
data:
  {"alleles_by_uniquename":{"SJAG_02763:allele-3":{"allele_type":"amino_acid_mutation","description":"S235A; S651","gene_uniquename":"SJAG_02763","name":"ned1S235A/S651","synonyms":[{"name":"refractory to phosphorylation","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-3"},"SJAG_03250:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03250","name":"sst4delta","uniquename":"SJAG_03250:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115342],"is_not":false,"summary":null,"term":"FYPO:0003751"},{"annotations":[115532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003780"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of all or part of the nuclear envelope is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02763":null,"SJAG_03250":null},"genotype_count":2,"genotypes_by_uniquename":{"ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235A/S651(S235A; S651 aa)","display_uniquename":"ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-3","expression":"Not assayed or wild type"}]}]},"sst4delta":{"display_name":"sst4delta","display_uniquename":"sst4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03250:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal nuclear envelope morphology","references_by_uniquename":{"PMID:26774782":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_02763","SJAG_03250"],"single_locus_genotype_uniquenames":["ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type","sst4delta"],"synonyms":[{"name":"normal nuclear envelope morphology during mitotic cell cycle","type":"exact"},{"name":"normal nuclear envelope morphology during vegetative growth","type":"exact"},{"name":"normal nuclear membrane morphology","type":"narrow"}],"termid":"FYPO:0003751","terms_by_termid":{"FYPO:0003751":null,"FYPO:0003780":null}}


id: PBO:0036282
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"identified from map position","termid":"PBO:0036282"}


id: PBO:0075081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 131","termid":"PBO:0075081"}


id: GO:0016816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in substances other than amides, amidines and nitriles.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in other compounds (obsolete GO:0016816)","synonyms":[{"name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in other compounds","type":"exact"}],"termid":"GO:0016816"}


id: PBO:0055920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A8, pseudogene","termid":"PBO:0055920"}


id: PBO:0057917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3620","termid":"PBO:0057917"}


id: GO:0097308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a farnesol stimulus.","definition_xrefs":["PMID:11425711","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"response to farnesol","termid":"GO:0097307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to farnesol","termid":"GO:0097308"}


id: FYPO:0002360
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at centromeric regions is normal (i.e. indistinguishable from wild type). Chromatin silencing is the observed effect of processes that repress transcription in a region of the genome that is normally assembled into heterochromatin or CENP-A-containing chromatin (the latter is found at the centromere central core).","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin silencing","termid":"FYPO:0002335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal chromatin silencing at centromere","synonyms":[{"name":"normal chromatin silencing at centromere during mitotic cell cycle","type":"related"},{"name":"normal chromatin silencing at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0002360"}


id: PBO:0087661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Iml1p/SEACIT complex; SEACIT (Iml1p-Npr2p-Npr3p) is a subcomplex of the SEA complex, a coatomer-related complex that associates dynamically with the vacuole; Npr2p may have a structural or regulatory role, supporting Iml1p function as a GAP for the Rag family GTPase Gtr1p, and resulting in inhibition of TORC1 signaling in response to amino acid deprivation; SEACIT is required for non-nitrogen-starvation-induced autophagy; homolog of human tumor suppressor NPRL2","termid":"PBO:0087661"}


id: PBO:0011958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial_amino_acid_deletion","termid":"PBO:0011958"}


id: GO:0110146
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a magnetosome.","definition_xrefs":["GOC:aa","PMID:27620945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane","termid":"GO:0031090"},{"relation_name":"part_of","term_name":"magnetosome","termid":"GO:0110143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"magnetosome membrane","termid":"GO:0110146"}


id: PBO:0077675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 25","termid":"PBO:0077675"}


id: PR:O13781
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17G6.03 gene.","definition_xrefs":["UniProtKB:O13781","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17G6.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.03","synonyms":[{"name":"Spom972h-SPAC17G6.03","type":"exact"}],"termid":"PR:O13781"}


id: GO:1903218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of malate dehydrogenase (decarboxylating) (NADP+) activity.","definition_xrefs":["GOC:sart","GO_REF:0000059","GOC:TermGenie","PMID:12398416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidoreductase activity","termid":"GO:0051341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of malate dehydrogenase (decarboxylating) (NADP+) activity","synonyms":[{"name":"regulation of 'malic' enzyme","type":"related"},{"name":"regulation of (S)-malate:NADP+ oxidoreductase (oxaloacetate-decarboxylating)","type":"exact"},{"name":"regulation of L-malate:NADP oxidoreductase activity","type":"exact"},{"name":"regulation of NADP-linked decarboxylating malic enzyme","type":"related"},{"name":"regulation of NADP-malic enzyme activity","type":"exact"},{"name":"regulation of NADP-specific malate dehydrogenase activity","type":"exact"},{"name":"regulation of NADP-specific malic enzyme","type":"related"},{"name":"regulation of malate dehydrogenase (NADP, decarboxylating)","type":"exact"},{"name":"regulation of malate dehydrogenase (decarboxylating, NADP)","type":"exact"}],"termid":"GO:1903218"}


id: PBO:0056855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIA-RAB4B readthrough (NMD candidate)","termid":"PBO:0056855"}


id: GO:0072732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of calcium ions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to calcium ion starvation","synonyms":[{"name":"cellular response to calcium starvation","type":"exact"}],"termid":"GO:0072732"}


id: GO:2000891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a cellobiose.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide metabolic process","termid":"GO:0005984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"cellobiose metabolic process","synonyms":[{"name":"cellobiose metabolism","type":"exact"}],"termid":"GO:2000891"}


id: GO:0061048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the process in which a highly ordered sequence of patterning events generates the branched structures of the lung, consisting of reiterated combinations of bud outgrowth, elongation, and dichotomous subdivision of terminal units.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of branching involved in lung morphogenesis","termid":"GO:0061046"},{"relation_name":"is_a","term_name":"negative regulation of morphogenesis of an epithelium","termid":"GO:1905331"},{"relation_name":"negatively_regulates","term_name":"epithelial tube branching involved in lung morphogenesis","termid":"GO:0060441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of branching involved in lung morphogenesis","termid":"GO:0061048"}


id: FYPO:0006205
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of dGTP measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular dNTP level","termid":"FYPO:0005753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular dGTP level","synonyms":[{"name":"normal cellular dGTP level during mitotic cell cycle","type":"related"},{"name":"normal cellular dGTP level during vegetative growth","type":"exact"},{"name":"normal dGTP accumulation","type":"related"}],"termid":"FYPO:0006205"}


id: PBO:0086854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative RNA-binding protein; associates with mRNAs encoding cell wall proteins in high-throughput studies; deletion mutants display increased sensitivity to some cell wall disrupting agents; expression negatively regulated by cAMP","termid":"PBO:0086854"}


id: PBO:0087260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase involved in vacuolar protein sorting; functions as a membrane-associated complex with Vps34p; active form recruits Vps34p to the Golgi membrane; interacts with the GDP-bound form of Gpa1p; myristoylated; a fraction is localized, with Vps34p, to nuclear pores at nucleus-vacuole junctions and may facilitate transcription elongation for genes positioned at the nuclear periphery","termid":"PBO:0087260"}


id: PBO:0073572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shisa family member 5","termid":"PBO:0073572"}


id: PBO:0031160
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_threonine_import","termid":"PBO:0031160"}


id: GO:0035247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a methyl group onto a terminal nitrogen (omega nitrogen) atom of an arginine residue in a protein.","definition_xrefs":["RESID:AA0067","RESID:AA0069","RESID:AA0068","PMID:14705965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-arginine N-methylation","termid":"GO:0035246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-arginine omega-N-methylation","termid":"GO:0035247"}


id: PBO:0044664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"doublecortin","termid":"PBO:0044664"}


id: PBO:0083517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF MND1/YGL183C","termid":"PBO:0083517"}


id: PBO:0030613
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_beta-glucan_level","termid":"PBO:0030613"}


id: GO:0062154
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + H2O + N6-methyl-AMP = IMP + methylamine. Can also use N6-methyl-dAMP as a substrate.","definition_xrefs":["RHEA:16001","PMID:29884623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"N6-methyl-AMP deaminase activity","secondary_identifiers":["Reactome:R-HSA-9731661","Reactome:R-HSA-2161187","Reactome:R-HSA-2161195"],"synonyms":[{"name":"MAPDA","type":"exact"},{"name":"N6-mAMP deaminase activity","type":"exact"},{"name":"N6-methyl-AMP/dAMP aminohydrolase","type":"exact"}],"termid":"GO:0062154"}


id: GO:0002545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A chronic inflammatory response to a non-antigenic stimulus such as heat or physical trauma.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic inflammatory response","termid":"GO:0002544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chronic inflammatory response to non-antigenic stimulus","termid":"GO:0002545"}


id: GO:0004578
data:
  {"annotated_genes":["SJAG_02102"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89957],"is_not":false,"summary":null,"term":"GO:0004578"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-mannose + chitobiosyldiphosphodolichol = GDP + beta-D-mannosylchitobiosyldiphosphodolichol.","definition_xrefs":["EC:2.4.1.142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-1,4-mannosyltransferase activity","termid":"GO:0019187"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02102":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"chitobiosyldiphosphodolichol beta-mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:2.4.1.142-RXN","Reactome:R-HSA-446218","RHEA:13865","Reactome:R-HSA-4549382"],"synonyms":[{"name":"GDP-mannose-dolichol diphosphochitobiose mannosyltransferase activity","type":"related"},{"name":"GDP-mannose:chitobiosyldiphosphodolichol beta-D-mannosyltransferase activity","type":"related"},{"name":"guanosine diphosphomannose-dolichol diphosphochitobiose mannosyltransferase activity","type":"related"}],"termid":"GO:0004578","terms_by_termid":{"GO:0004578":null}}


id: GO:0071243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an arsenic stimulus from compounds containing arsenic, including arsenates, arsenites, and arsenides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to arsenic-containing substance","termid":"GO:0046685"},{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to arsenic-containing substance","synonyms":[{"name":"cellular response to arsenic","type":"exact"}],"termid":"GO:0071243"}


id: GO:1900968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sarcinapterin metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"is_a","term_name":"regulation of pteridine metabolic process","termid":"GO:0042068"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"sarcinapterin metabolic process","termid":"GO:1900867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of sarcinapterin metabolic process","synonyms":[{"name":"regulation of sarcinapterin metabolism","type":"exact"}],"termid":"GO:1900968"}


id: PBO:0088791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex DNA helicase (human ERCC2) subunit Rad15","termid":"PBO:0088791"}


id: GO:0045476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a nurse cell. During late oogenesis, following the transfer of substances from the nurse cells to the oocyte, nurse cell remnants are cleared from the egg chamber by apoptotic process.","definition_xrefs":["PMID:11973306","CL:0000026","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"programmed cell death involved in cell development","termid":"GO:0010623"},{"relation_name":"is_a","term_name":"apoptotic process involved in development","termid":"GO:1902742"},{"relation_name":"part_of","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nurse cell apoptotic process","synonyms":[{"name":"apoptosis of nurse cells","type":"exact"},{"name":"invertebrate nurse cell apoptosis","type":"narrow"},{"name":"nurse cell apoptosis","type":"narrow"},{"name":"nurse cell programmed cell death by apoptosis","type":"exact"},{"name":"programmed cell death of nurse cells by apoptosis","type":"exact"}],"termid":"GO:0045476"}


id: GO:0002728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of natural killer cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of natural killer cell mediated immunity","termid":"GO:0002716"},{"relation_name":"is_a","term_name":"negative regulation of cytokine production involved in immune response","termid":"GO:0002719"},{"relation_name":"is_a","term_name":"regulation of natural killer cell cytokine production","termid":"GO:0002727"},{"relation_name":"negatively_regulates","term_name":"natural killer cell cytokine production","termid":"GO:0002370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of natural killer cell cytokine production","synonyms":[{"name":"down regulation of natural killer cell cytokine production","type":"exact"},{"name":"down-regulation of natural killer cell cytokine production","type":"exact"},{"name":"downregulation of natural killer cell cytokine production","type":"exact"},{"name":"inhibition of natural killer cell cytokine production","type":"narrow"},{"name":"negative regulation of NK cell cytokine production","type":"exact"}],"termid":"GO:0002728"}


id: PBO:0047490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferrochelatase","termid":"PBO:0047490"}


id: GO:0010242
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H2O = O2 + 4 H+ + 4 e-. The evolution of oxygen from oxidizing water is carried out by the oxygen evolving complex in photosystem II of plants. P680+, the photochemically oxidized reaction-center chlorophyll of PSII, is a strong biological oxidant. The reduction potential of P680+ is more positive than that of water, and thus it can oxidize water to give O2 and H+ ions. The oxygen escapes as a gas while the H+ ions remain in solution inside the thylakoid vesicle.","definition_xrefs":["GOC:kd","GOC:syr","PMID:17091926","PMID:7948862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxygen evolving activity","secondary_identifiers":["RHEA:36359","MetaCyc:RXN0-5265","EC:1.10.3.9","MetaCyc:PSII-RXN"],"synonyms":[{"name":"photosynthetic water oxidation","type":"exact"}],"termid":"GO:0010242"}


id: PBO:0051140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-16 (non-functional)","termid":"PBO:0051140"}


id: GO:0045646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of erythrocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid cell differentiation","termid":"GO:0045637"},{"relation_name":"regulates","term_name":"erythrocyte differentiation","termid":"GO:0030218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of erythrocyte differentiation","synonyms":[{"name":"regulation of RBC differentiation","type":"exact"},{"name":"regulation of red blood cell differentiation","type":"exact"}],"termid":"GO:0045646"}


id: GO:0031726
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CCR1 chemokine receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CCR chemokine receptor binding","termid":"GO:0048020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"CCR1 chemokine receptor binding","synonyms":[{"name":"CCR1 chemokine receptor ligand","type":"narrow"},{"name":"macrophage inflammatory protein-1 alpha receptor binding","type":"exact"}],"termid":"GO:0031726"}


id: GO:0043589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the skin are generated and organized. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner, sensitive and vascular dermis (cutis, corium or true skin) composed mostly of connective tissue.","definition_xrefs":["GOC:jl","UBERON:0002097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"skin development","termid":"GO:0043588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skin morphogenesis","termid":"GO:0043589"}


id: GO:0046948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of hydroxylysine (5-hydroxy-2,6-diaminohexanoic acid), a chiral alpha-amino acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate family amino acid catabolic process","termid":"GO:0009068"},{"relation_name":"is_a","term_name":"cellular modified amino acid catabolic process","termid":"GO:0042219"},{"relation_name":"is_a","term_name":"hydroxylysine metabolic process","termid":"GO:0046946"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"hydroxylysine catabolic process","synonyms":[{"name":"hydroxylysine breakdown","type":"exact"},{"name":"hydroxylysine catabolism","type":"exact"},{"name":"hydroxylysine degradation","type":"exact"}],"termid":"GO:0046948"}


id: PBO:0027370
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_cellular_amino_acid_level_during_vegetative_growth","termid":"PBO:0027370"}


id: PBO:0064588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member H","termid":"PBO:0064588"}


id: PR:Q9HE13
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1399.02 gene.","definition_xrefs":["UniProtKB:Q9HE13","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized MFS-type transporter C1399.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1399.02","synonyms":[{"name":"Spom972h-SPAC1399.02","type":"exact"}],"termid":"PR:Q9HE13"}


id: PBO:0001476
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.4.99.7","termid":"PBO:0001476"}


id: GO:0008869
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galactonate = 2-dehydro-3-deoxy-D-galactonate + H2O.","definition_xrefs":["RHEA:18649","EC:4.2.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"galactonate dehydratase activity","secondary_identifiers":["MetaCyc:GALACTONDEHYDRAT-RXN","KEGG_REACTION:R03033"],"synonyms":[{"name":"D-galactonate dehydrase activity","type":"related"},{"name":"D-galactonate dehydratase activity","type":"related"},{"name":"D-galactonate hydro-lyase (2-dehydro-3-deoxy-D-galactonate-forming)","type":"related"},{"name":"D-galactonate hydro-lyase activity","type":"related"}],"termid":"GO:0008869"}


id: PBO:0087728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Set3 complex; complex is a meiotic-specific repressor of sporulation specific genes that contains deacetylase activity; potential Cdc28p substrate","termid":"PBO:0087728"}


id: PATO:0001206
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of having sharp straight-edged teeth pointing to the apex.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serration","termid":"PATO:0001976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serrated","synonyms":[{"name":"serrate","type":"exact"}],"termid":"PATO:0001206"}


id: GO:0038074
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: a phosphorylated MAP kinase + H2O = a MAP kinase + phosphate, where the MAP kinase (MAPK) is part of a MAPK signaling cascade that contributes to conjugation with cellular fusion.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase phosphatase activity involved in regulation of conjugation with cellular fusion (obsolete GO:0038074)","synonyms":[{"name":"MAPK phosphatase activity involved in regulation of conjugation with cellular fusion","type":"exact"}],"termid":"GO:0038074"}


id: FYPO:0004783
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a histone methyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization","termid":"FYPO:0000642"},{"relation_name":"is_a","term_name":"abnormal protein methyltransferase activity","termid":"FYPO:0005723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000002","FYPO:0005447","FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"abnormal histone methyltransferase activity","termid":"FYPO:0004783"}


id: PBO:0000750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated lipase Atg15","termid":"PBO:0000750"}


id: PBO:0068087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 393","termid":"PBO:0068087"}


id: GO:0060781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of mesenchymal cells, resulting in the expansion of a cell population that contributes to the progression of the prostate gland over time.","definition_xrefs":["PMID:12221011","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell proliferation","termid":"GO:0010463"},{"relation_name":"part_of","term_name":"prostate gland development","termid":"GO:0030850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell proliferation involved in prostate gland development","termid":"GO:0060781"}


id: PBO:0086138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for mismatch repair in mitosis and meiosis; forms a complex with Msh2p to repair both single-base & insertion-deletion mispairs; also involved in interstrand cross-link repair; potentially phosphorylated by Cdc28p; contains PIP motif that binds PCNA (Pol30p) and Rev1p","termid":"PBO:0086138"}


id: GO:0102758
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a very-long-chain 2,3-saturated fatty acyl-CoA + NADP+ = a very-long-chain (2E)-enoyl-CoA + H+ + NADPH. This reaction is the fourth (reduction) step of the four-step fatty acid elongation cycle in the endoplasmic reticulum that extends fatty acids of C-16 or longer with an additional 2-C unit.","definition_xrefs":["RHEA:14473","PMID:19763486","PMID:16564093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"very-long-chain enoyl-CoA reductase activity","secondary_identifiers":["EC:1.3.1.93","MetaCyc:RXN-7711"],"termid":"GO:0102758"}


id: PR:000085730
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.2, initiator methionine removed form (Schizosaccharomyces pombe) that has been methylated on Lys-9 but not phosphorylated on Ser-10. Example: UniProtKB:P09988, 2-136, Lys-10, MOD:00663|Ser-11, PR:000026291.","definition_xrefs":["PRO:DAN","PomBase:VW","PMID:19362535"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.2, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht2/Me:(K9),UnPhos(S10)","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"PRO_0000221366, Lys-10, MOD:00663|Ser-11, PR:000026291","type":"related"},{"name":"PomBase_original_PRO_term_name: histone H3.2, initiator methionine removed K9-methylated and unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht2/InitMet-/K9MeUnPhos:1","type":"exact"},{"name":"UniProtKB:P09988, 2-136, Lys-10, MOD:00663|Ser-11, PR:000026291","type":"related"},{"name":"hht2/Me:(K9),UnPhos(S10)","type":"exact"}],"termid":"PR:000085730"}


id: PBO:0073788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 5 member 8","termid":"PBO:0073788"}


id: PBO:0040571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,4-galactosyltransferase 5","termid":"PBO:0040571"}


id: GO:0047106
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (4-hydroxyphenyl)acetaldehyde + H2O + NAD+ = 4-hydroxyphenylacetate + 2 H+ + NADH.","definition_xrefs":["RHEA:17273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4-hydroxyphenylacetaldehyde dehydrogenase (NAD+) activity","secondary_identifiers":["MetaCyc:1.2.1.53-RXN","EC:1.2.1.53"],"synonyms":[{"name":"4-HPAL dehydrogenase activity","type":"related"},{"name":"4-hydroxyphenylacetaldehyde:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0047106"}


id: PBO:0038764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR3 pseudogene 1","termid":"PBO:0038764"}


id: PBO:0077623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymosin beta 15B","termid":"PBO:0077623"}


id: GO:0075306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of conidium formation, a process of producing non-motile spores, called conidia, via mitotic asexual reproduction in higher fungi. Conidia are haploid cells genetically identical to their haploid parent. They are produced by conversion of hyphal elements, or are borne on sporogenous cells on or within specialized structures termed conidiophores, and participate in dispersal of the fungus.","definition_xrefs":["GOC:pamgo_curators","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asexual sporulation","termid":"GO:0034305"},{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"regulates","term_name":"conidium formation","termid":"GO:0048315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of conidium formation","termid":"GO:0075306"}


id: GO:0000031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-alpha-D-mannose + n {[alpha-D-Man-(1->2)-alpha-D-Man-(1->2)]-alpha-D-Man-(1->6)}60-(Man9GlcNAc2-[protein] = phosphorylated {[alpha-D-Man-(1->2)-alpha-D-Man-(1->2)]-alpha-D-Man-(1->6)}60-(Man9GlcNAc2-[protein] + n GMP + n H+ or GDP-alpha-D-mannose + alpha-D-Man-(1->3)-alpha-D-Man-(1->3)-alpha-D-Man-(1->2)-alpha-D-Man-(1->2)-alpha-D-Man-3-O-(Ser/Thr)-[protein] = alpha-D-Man-(1->3)-alpha-D-Man-(1->3)-[alpha-D-Man-6P-]-alpha-D-Man-(1->2)-alpha-D-Man-(1->2)-alpha-D-Man-3-O-(Ser/Thr)-[protein] + GMP + H+.","definition_xrefs":["MetaCyc:RXN-22694","MetaCyc:RXN-22693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"mannosylphosphate transferase activity","termid":"GO:0000031"}


id: FYPO:0001448
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"},{"relation_name":"is_a","term_name":"altered cellular trehalose level","termid":"FYPO:0001446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"trehalose absent from cell during heat shock","synonyms":[{"name":"absent trehalose","type":"exact"},{"name":"trehalose absent from cell during heat shock during mitotic cell cycle","type":"related"},{"name":"trehalose absent from cell during vegetative growth and during heat shock","type":"exact"}],"termid":"FYPO:0001448"}


id: SO:0000872
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An mRNA that is trans-spliced.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"adjacent_to","term_name":"spliced_leader_RNA","termid":"SO:0000636"},{"relation_name":"has_quality","term_name":"trans_spliced","termid":"SO:0000870"},{"relation_name":"is_a","term_name":"mRNA","termid":"SO:0000234"},{"relation_name":"is_a","term_name":"trans_spliced_transcript","termid":"SO:0000479"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans_spliced_mRNA","synonyms":[{"name":"trans-spliced mRNA","type":"exact"}],"termid":"SO:0000872"}


id: GO:0090584
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + galactitol(out) = protein cysteine + galactitol-6-phosphate(in).","definition_xrefs":["PMID:8955298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-phosphocysteine-sugar phosphotransferase activity","termid":"GO:0090563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0005215","GO:0003674","GO:0016740","GO:0022857"],"is_obsolete":false,"name":"protein-phosphocysteine-galactitol-phosphotransferase system transporter activity","termid":"GO:0090584"}


id: GO:0102302
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + mycinamicin VI = S-adenosyl-L-homocysteine + mycinamicin III(1+) + H+.","definition_xrefs":["EC:2.1.1.238","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"mycinamicin VI 2''-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-12801","RHEA:31643"],"termid":"GO:0102302"}


id: PATO:0002454
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A  quality inhering in a bearer by virtue of the bearer's similarity to the appearance of a carpel.","definition_xrefs":["PATO:JL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carpel-like","termid":"PATO:0002454"}


id: GO:0099065
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the spine apparatus membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of spine apparatus membrane (obsolete GO:0099065)","termid":"GO:0099065"}


id: GO:0017051
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + retinol = adenosine 3',5'-bisphosphate + anhydroretinol.","definition_xrefs":["PMID:9857081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"retinol dehydratase activity","termid":"GO:0017051"}


id: PBO:0110235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER and nuclear envelope ubiquitin-protein ligase E3 Doa10","termid":"PBO:0110235"}


id: GO:0009288
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A motor complex composed of an extracellular helical protein filament coupled to a rotary motor embedded in the cell envelope.","definition_xrefs":["GOC:mtg_sensu","GOC:krc","GOC:jh2","PMID:7787060","Wikipedia:Flagellum#Bacterial","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection","termid":"GO:0042995"},{"relation_name":"is_a","term_name":"non-membrane-bounded organelle","termid":"GO:0043228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial-type flagellum","synonyms":[{"name":"flagellin-based flagellum","type":"exact"}],"termid":"GO:0009288"}


id: PBO:0088180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc-cluster protein; GFP-fusion protein localizes to the nucleus; mutant shows moderate growth defect on caffeine; has a prion-domain like fragment that increases frequency of [URE3]; associates with rDNA chromatin in vivo; YLR278C is not an essential gene","termid":"PBO:0088180"}


id: GO:0018265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a C-terminal peptidyl-asparagine ethanolamide-linked glycosylphosphatidylinositol (GPI) anchor following hydrolysis of a asparaginyl-peptide bond in the carboxy-terminal region of a membrane-associated protein.","definition_xrefs":["RESID:AA0158"],"gene_count":0,"genotype_count":0,"name":"obsolete GPI anchor biosynthetic process via N-asparaginyl-glycosylphosphatidylinositolethanolamine (obsolete GO:0018265)","termid":"GO:0018265"}


id: PBO:0030666
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_25S_rRNA_level","termid":"PBO:0030666"}


id: GO:0033295
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to hydroxyectoine.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"},{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"},{"relation_name":"is_a","term_name":"quaternary ammonium group binding","termid":"GO:0050997"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"hydroxyectoine binding","termid":"GO:0033295"}


id: PBO:0005805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminopeptidase (predicted)","termid":"PBO:0005805"}


id: GO:0002347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a tumor cell.","definition_xrefs":["PMID:16730260","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to biotic stimulus","termid":"GO:0009607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to tumor cell","termid":"GO:0002347"}


id: FYPO:0002471
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"abolished protein phosphorylation during cellular response to ionizing radiation","synonyms":[{"name":"abolished protein phosphorylation during cellular response to IR","type":"exact"},{"name":"abolished protein phosphorylation during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"protein phosphorylation abolished during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0002471"}


id: PBO:0032756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein Aim19","termid":"PBO:0032756"}


id: PBO:0065422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit beta 8","termid":"PBO:0065422"}


id: FYPO:0002071
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell has a nucleus in an abnormal location. The normal location of a single nucleus is at the midpoint of the long axis of the cell (during mitotic telophase, daughter nuclei normally move away from the cell division site).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"},{"relation_name":"is_a","term_name":"mislocalized nucleus","termid":"FYPO:0002069"},{"relation_name":"output_of","term_name":"abnormal nucleus positioning during vegetative growth","termid":"FYPO:0001338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"mislocalized nucleus during vegetative growth","synonyms":[{"name":"abnormal nucleus location during vegetative growth","type":"exact"},{"name":"abnormal nucleus position during vegetative growth","type":"exact"},{"name":"displaced nucleus during vegetative growth","type":"exact"},{"name":"mislocalised nucleus during vegetative growth","type":"exact"},{"name":"mislocalized nucleus during mitotic cell cycle","type":"related"},{"name":"misplaced nuclei during vegetative growth","type":"exact"},{"name":"misplaced nucleus during vegetative growth","type":"exact"},{"name":"nuclear displacement during vegetative growth","type":"exact"}],"termid":"FYPO:0002071"}


id: GO:0046571
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-keto-4-methylthiobutyrate + aspartate = methionine + oxaloacetate.","definition_xrefs":["MetaCyc:R15-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete aspartate-2-keto-4-methylthiobutyrate transaminase activity (obsolete GO:0046571)","termid":"GO:0046571"}


id: FYPO:0000791
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of actin cortical patches is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton morphology during vegetative growth","termid":"FYPO:0000350"},{"relation_name":"is_a","term_name":"abnormal actin cortical patch","termid":"FYPO:0003987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0004803","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal actin cortical patch morphology","synonyms":[{"name":"abnormal F-actin patch morphology","type":"exact"},{"name":"abnormal actin cortical patch morphology during mitotic cell cycle","type":"related"},{"name":"abnormal actin cortical patch morphology during vegetative growth","type":"exact"},{"name":"abnormal actin patch morphology","type":"exact"}],"termid":"FYPO:0000791"}


id: PBO:0027692
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromosome_morphology,_indistinct_DNA","termid":"PBO:0027692"}


id: PBO:0073179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein K pseudogene 1","termid":"PBO:0073179"}


id: PBO:0052049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KAT8 regulatory NSL complex subunit 1","termid":"PBO:0052049"}


id: GO:0030186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving melatonin (N-acetyl-5-methoxytryptamine).","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole-containing compound metabolic process","termid":"GO:0042430"},{"relation_name":"is_a","term_name":"hormone metabolic process","termid":"GO:0042445"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"melatonin metabolic process","synonyms":[{"name":"melatonin metabolism","type":"exact"}],"termid":"GO:0030186"}


id: PBO:0091414
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human XPO1","termid":"PBO:0091414"}


id: PBO:0048485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"germinal center associated signaling and motility","termid":"PBO:0048485"}


id: GO:1990201
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of alkanesulfonate monooxygenase activity. Involved in the utilization of alkanesulfonates as sulfur sources under conditions of sulfate or cysteine starvation, catalyzing the conversion of alkanesulfonates into aldehydes and sulfite. In E.coli the complex consists of a SsuD tetramer.","definition_xrefs":["PMID:10480865","PMID:16997955","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005829","GO:0005575"],"is_obsolete":false,"name":"alkanesulfonate monooxygenase complex","synonyms":[{"name":"SsuD complex","type":"narrow"}],"termid":"GO:1990201"}


id: FYPO:0001715
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of succinate into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal succinate import","synonyms":[{"name":"abnormal succinate import across plasma membrane","type":"exact"},{"name":"abnormal succinate import during mitotic cell cycle","type":"related"},{"name":"abnormal succinate import during vegetative growth","type":"exact"},{"name":"abnormal succinate import into cell","type":"exact"},{"name":"abnormal succinate uptake","type":"exact"},{"name":"abnormal succinic acid import","type":"related"}],"termid":"FYPO:0001715"}


id: PBO:0003637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR95","termid":"PBO:0003637"}


id: GO:0097600
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A xylanase activity that acts on one of the ends of a xylan polymer which does not contain side chains.","definition_xrefs":["GOC:jh2","ISBN:81-7736-269-0","PMID:16535010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylanase activity","termid":"GO:0097599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"exoxylanase activity","termid":"GO:0097600"}


id: PBO:0049301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase mu 3 pseudogene 1","termid":"PBO:0049301"}


id: GO:0050483
data:
  {"annotated_genes":["SJAG_03096"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104559],"is_not":false,"summary":null,"term":"GO:0050483"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5'-IMP + H2O = inosine + phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5'-nucleotidase activity","termid":"GO:0008253"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"IMP 5'-nucleotidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:27718","MetaCyc:RXN-7607"],"synonyms":[{"name":"IMP 5' nucleotidase activity","type":"exact"},{"name":"IMP-GMP specific 5'-nucleotidase activity","type":"related"}],"termid":"GO:0050483","terms_by_termid":{"GO:0050483":null}}


id: PBO:0113259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal matrix-localized lipase; target of SCFCdc4 ubiquitin ligase complex; peroxisomal, nuclear and cytosolic localization is dependent on the presence of oleate; transcription is regulated by Azf1p; LPX2 has a paralog, EIS1, that arose from the whole genome duplication","termid":"PBO:0113259"}


id: PBO:0084781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial peroxiredoxin with thioredoxin peroxidase activity; has a role in reduction of hydroperoxides; reactivation requires Trr2p and glutathione; induced during respiratory growth and oxidative stress; phosphorylated; protein abundance increases in response to DNA replication stress","termid":"PBO:0084781"}


id: PBO:0059745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 19","termid":"PBO:0059745"}


id: GO:1903771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of beta-galactosidase activity.","definition_xrefs":["PMID:11927518","GO_REF:0000059","GOC:BHF","GOC:nc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hydrolase activity","termid":"GO:0051345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of beta-galactosidase activity","synonyms":[{"name":"up regulation of beta-lactosidase activity","type":"exact"},{"name":"activation of S 2107","type":"related"},{"name":"activation of beta-D-galactanase activity","type":"narrow"},{"name":"activation of beta-D-galactoside galactohydrolase activity","type":"narrow"},{"name":"activation of beta-D-lactosidase activity","type":"narrow"},{"name":"activation of beta-galactosidase activity","type":"narrow"},{"name":"activation of beta-lactosidase activity","type":"narrow"},{"name":"activation of exo-(1->4)-beta-D-galactanase activity","type":"narrow"},{"name":"activation of hydrolact","type":"related"},{"name":"activation of lactose hydrolysis","type":"related"},{"name":"activation of lactozym","type":"related"},{"name":"activation of maxilact","type":"related"},{"name":"activation of oryzatym","type":"related"},{"name":"activation of sumiklat","type":"related"},{"name":"activation of trilactase activity","type":"narrow"},{"name":"positive regulation of S 2107","type":"related"},{"name":"positive regulation of beta-D-galactanase activity","type":"exact"},{"name":"positive regulation of beta-D-galactoside galactohydrolase activity","type":"exact"},{"name":"positive regulation of beta-D-lactosidase activity","type":"exact"},{"name":"positive regulation of beta-lactosidase activity","type":"exact"},{"name":"positive regulation of exo-(1->4)-beta-D-galactanase activity","type":"exact"},{"name":"positive regulation of hydrolact","type":"related"},{"name":"positive regulation of lactose hydrolysis","type":"related"},{"name":"positive regulation of lactozym","type":"related"},{"name":"positive regulation of maxilact","type":"related"},{"name":"positive regulation of oryzatym","type":"related"},{"name":"positive regulation of sumiklat","type":"related"},{"name":"positive regulation of trilactase activity","type":"exact"},{"name":"up regulation of S 2107","type":"related"},{"name":"up regulation of beta-D-galactanase activity","type":"exact"},{"name":"up regulation of beta-D-galactoside galactohydrolase activity","type":"exact"},{"name":"up regulation of beta-D-lactosidase activity","type":"exact"},{"name":"up regulation of beta-galactosidase activity","type":"exact"},{"name":"up regulation of exo-(1->4)-beta-D-galactanase activity","type":"exact"},{"name":"up regulation of hydrolact","type":"related"},{"name":"up regulation of lactose hydrolysis","type":"related"},{"name":"up regulation of lactozym","type":"related"},{"name":"up regulation of maxilact","type":"related"},{"name":"up regulation of oryzatym","type":"related"},{"name":"up regulation of sumiklat","type":"related"},{"name":"up regulation of trilactase activity","type":"exact"},{"name":"up-regulation of S 2107","type":"related"},{"name":"up-regulation of beta-D-galactanase activity","type":"exact"},{"name":"up-regulation of beta-D-galactoside galactohydrolase activity","type":"exact"},{"name":"up-regulation of beta-D-lactosidase activity","type":"exact"},{"name":"up-regulation of beta-galactosidase activity","type":"exact"},{"name":"up-regulation of beta-lactosidase activity","type":"exact"},{"name":"up-regulation of exo-(1->4)-beta-D-galactanase activity","type":"exact"},{"name":"up-regulation of hydrolact","type":"related"},{"name":"up-regulation of lactose hydrolysis","type":"related"},{"name":"up-regulation of lactozym","type":"related"},{"name":"up-regulation of maxilact","type":"related"},{"name":"up-regulation of oryzatym","type":"related"},{"name":"up-regulation of sumiklat","type":"related"},{"name":"up-regulation of trilactase activity","type":"exact"},{"name":"upregulation of S 2107","type":"related"},{"name":"upregulation of beta-D-galactanase activity","type":"exact"},{"name":"upregulation of beta-D-galactoside galactohydrolase activity","type":"exact"},{"name":"upregulation of beta-D-lactosidase activity","type":"exact"},{"name":"upregulation of beta-galactosidase activity","type":"exact"},{"name":"upregulation of beta-lactosidase activity","type":"exact"},{"name":"upregulation of exo-(1->4)-beta-D-galactanase activity","type":"exact"},{"name":"upregulation of hydrolact","type":"related"},{"name":"upregulation of lactose hydrolysis","type":"related"},{"name":"upregulation of lactozym","type":"related"},{"name":"upregulation of maxilact","type":"related"},{"name":"upregulation of oryzatym","type":"related"},{"name":"upregulation of sumiklat","type":"related"},{"name":"upregulation of trilactase activity","type":"exact"}],"termid":"GO:1903771"}


id: PBO:0089362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase","termid":"PBO:0089362"}


id: GO:0035625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an epidermal growth factor-activated receptor is activated via signaling events from a consequence of a G protein-coupled . This is an example of cross-talk between the EGF and GPCR signaling pathways.","definition_xrefs":["GOC:bf","GOC:BHF","PMID:17655843","PMID:10622253"],"gene_count":0,"genotype_count":0,"name":"obsolete epidermal growth factor-activated receptor transactivation by G-protein coupled receptor signaling pathway (obsolete GO:0035625)","synonyms":[{"name":"EGFR transactivation by GPCR","type":"exact"},{"name":"EGFR transactivation upon GPCR stimulation","type":"exact"},{"name":"epidermal growth factor receptor transactivation by G-protein coupled receptor signaling pathway","type":"exact"},{"name":"epidermal growth factor-activated receptor transactivation by G-protein coupled receptor signalling pathway","type":"exact"}],"termid":"GO:0035625"}


id: PBO:0066267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 1 member A3, pseudogene","termid":"PBO:0066267"}


id: PBO:0058001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3925","termid":"PBO:0058001"}


id: PR:P30597
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- chs1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P30597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.12c","synonyms":[{"name":"Spom972h-chs1","type":"exact"},{"name":"chitin-UDP acetyl-glucosaminyl transferase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P30597"}


id: PBO:0091005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1708 family conserved fungal protein, cell division site","termid":"PBO:0091005"}


id: GO:0016241
data:
  {"annotated_genes":["SJAG_01716","SJAG_04435","SJAG_02433","SJAG_05289","SJAG_02723","SJAG_03851","SJAG_04496"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016242"},{"annotations":[104616,104707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000786"},{"annotations":[93682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901098"},{"annotations":[94069,102304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016239"},{"annotations":[85587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140501"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of macroautophagy.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of autophagy","termid":"GO:0010506"},{"relation_name":"regulates","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01716":null,"SJAG_02433":null,"SJAG_02723":null,"SJAG_03851":null,"SJAG_04435":null,"SJAG_04496":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006914"],"is_obsolete":false,"name":"regulation of macroautophagy","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of starvation-induced autophagy","type":"exact"}],"termid":"GO:0016241","terms_by_termid":{"GO:0016239":null,"GO:0016242":null,"GO:0140501":null,"GO:1901098":null,"GO:2000786":null}}


id: PBO:0064021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 55","termid":"PBO:0064021"}


id: GO:0000376
data:
  {"annotated_genes":["SJAG_04738","SJAG_01517"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94765],"is_not":false,"summary":null,"term":"GO:0000376"},{"annotations":[94147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000372"}]},"cv_name":"biological_process","definition":"Splicing of RNA via a series of two transesterification reactions with exogenous guanosine as the initiating nucleophile.","definition_xrefs":["PMID:11377794","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA splicing, via transesterification reactions","termid":"GO:0000375"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01517":null,"SJAG_04738":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"RNA splicing, via transesterification reactions with guanosine as nucleophile","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000376","terms_by_termid":{"GO:0000372":null,"GO:0000376":null}}


id: PBO:0070800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 30","termid":"PBO:0070800"}


id: GO:0032119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of binding or confining zinc ions such that they are separated from other components of a biological system.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequestering of metal ion","termid":"GO:0051238"},{"relation_name":"is_a","term_name":"maintenance of location in cell","termid":"GO:0051651"},{"relation_name":"part_of","term_name":"intracellular zinc ion homeostasis","termid":"GO:0006882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0098771","GO:0008150"],"is_obsolete":false,"name":"sequestering of zinc ion","termid":"GO:0032119"}


id: PBO:0056190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member A3","termid":"PBO:0056190"}


id: PBO:0054336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1729","termid":"PBO:0054336"}


id: PBO:0041114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone marrow stromal cell antigen 1","termid":"PBO:0041114"}


id: GO:0004900
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with erythropoietin and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"erythropoietin receptor activity","termid":"GO:0004900"}


id: PR:000044738
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe) that has been post-translationally modified to include phosphoserine at position 2 of one or more C-terminal heptad repeats (YSPTSPS).","definition_xrefs":["PMID:28367989","PRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe)","termid":"PR:000044736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rpb1/Phos(CTD-S2)","pombase_gene_id":"SPBC28F2.12","synonyms":[{"name":"PomBase_original_PRO_term_name: DNA-directed RNA polymerase II subunit rpb1 phosphorylated 5 (Schizosaccharomyces pombe)","type":"exact"},{"name":"S2P-Pol II (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rpb1/Phos:5","type":"exact"},{"name":"rpb1/Phos(CTD-S2)","type":"exact"}],"termid":"PR:000044738"}


id: PBO:0087265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ser/Thr kinase involved in late nuclear division; one of the mitotic exit network (MEN) proteins; necessary for the execution of cytokinesis; also plays a role in regulating the stability of SWI5 and CLB2 mRNAs; DBF20 has a paralog, DBF2, that arose from the whole genome duplication","termid":"PBO:0087265"}


id: PBO:0077625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymosin beta 15C","termid":"PBO:0077625"}


id: GO:0001792
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a J-chain-containing polymeric immunoglobulin of the IgA or IgM isotypes via the Fc region, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin receptor activity","termid":"GO:0019763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"polymeric immunoglobulin receptor activity","termid":"GO:0001792"}


id: PATO:0000651
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being no longer merged with another entity.","definition_xrefs":["PATOC:nw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unfused from","synonyms":[{"name":"unfused","type":"exact"}],"termid":"PATO:0000651"}


id: PBO:0069207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 462, pseudogene","termid":"PBO:0069207"}


id: PBO:0047823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box O3B","termid":"PBO:0047823"}


id: PBO:0028078
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiple_mitotic_spindles_with_abolished_sister_chromatid_separation","termid":"PBO:0028078"}


id: PATO:0001510
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A functionality quality held by the bearer when the latter is able to perform a regular function(s).","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functionality","termid":"PATO:0001509"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functional","termid":"PATO:0001510"}


id: PBO:0046209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 2","termid":"PBO:0046209"}


id: GO:0033652
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chlorophyll-containing plastid as found within host cells with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell plastid","termid":"GO:0033651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell chloroplast","termid":"GO:0033652"}


id: GO:0072237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric proximal tubule over time, from its formation to the mature structure. The metanephric proximal tubule is a metanephric nephron tubule that connects Bowman's capsule to the descending thin limb of the loop of Henle in the metanephros. It has a brush border epithelial morphology.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal tubule development","termid":"GO:0072014"},{"relation_name":"is_a","term_name":"metanephric nephron tubule development","termid":"GO:0072234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric proximal tubule development","termid":"GO:0072237"}


id: GO:0006085
data:
  {"annotated_genes":["SJAG_00982","SJAG_02741","SJAG_03290","SJAG_03731","SJAG_02006","SJAG_02158","SJAG_01139","SJAG_03064","SJAG_00866","SJAG_01402"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89306,94442],"is_not":false,"summary":null,"term":"GO:0006085"},{"annotations":[112167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019427"},{"annotations":[113124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[91062,114520,83502,104645,110302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006086"},{"annotations":[95091],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010510"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of acetyl-CoA, a derivative of coenzyme A in which the sulfhydryl group is acetylated.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyl-CoA metabolic process","termid":"GO:0006084"},{"relation_name":"is_a","term_name":"acyl-CoA biosynthetic process","termid":"GO:0071616"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00866":null,"SJAG_00982":null,"SJAG_01139":null,"SJAG_01402":null,"SJAG_02006":null,"SJAG_02158":null,"SJAG_02741":null,"SJAG_03064":null,"SJAG_03290":null,"SJAG_03731":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"acetyl-CoA biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:Acetyl-CoA-Biosynthesis"],"synonyms":[{"name":"acetyl-CoA anabolism","type":"exact"},{"name":"acetyl-CoA biosynthesis","type":"exact"},{"name":"acetyl-CoA formation","type":"exact"},{"name":"acetyl-CoA synthesis","type":"exact"}],"termid":"GO:0006085","terms_by_termid":{"GO:0006085":null,"GO:0006086":null,"GO:0010510":null,"GO:0019427":null,"GO:1990181":null}}


id: GO:0102143
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: carboxynorspermidine + NADP + H2O = L-aspartic acid 4-semialdehyde betaine + trimethylenediaminium + NADPH + H+.","definition_xrefs":["EC:1.5.1.43","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"carboxynorspermidine dehydrogenase I activity","secondary_identifiers":["MetaCyc:RXN-11565","RHEA:34115"],"termid":"GO:0102143"}


id: PBO:0035738
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_methylation_during_vegetative_growth","termid":"PBO:0035738"}


id: PBO:0018109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transmembrane transporter Ght6","termid":"PBO:0018109"}


id: PBO:0071950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S5","termid":"PBO:0071950"}


id: GO:0072086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the loop of Henle of the kidney nephron acquires its identity.","definition_xrefs":["GOC:bf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of nephron tubule identity","termid":"GO:0072081"},{"relation_name":"part_of","term_name":"loop of Henle development","termid":"GO:0072070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of loop of Henle identity","secondary_identifiers":["GO:0072083"],"synonyms":[{"name":"specification of intermediate tubule identity","type":"exact"}],"termid":"GO:0072086"}


id: GO:0030501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of bone mineralization.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of bone mineralization","termid":"GO:0030500"},{"relation_name":"is_a","term_name":"positive regulation of ossification","termid":"GO:0045778"},{"relation_name":"is_a","term_name":"positive regulation of biomineral tissue development","termid":"GO:0070169"},{"relation_name":"positively_regulates","term_name":"bone mineralization","termid":"GO:0030282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of bone mineralization","synonyms":[{"name":"activation of bone mineralization","type":"narrow"},{"name":"stimulation of bone mineralization","type":"narrow"},{"name":"up regulation of bone mineralization","type":"exact"},{"name":"up-regulation of bone mineralization","type":"exact"},{"name":"upregulation of bone mineralization","type":"exact"}],"termid":"GO:0030501"}


id: FYPO:0003543
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the number of sites of double-strand breaks in DNA is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased DNA damage","termid":"FYPO:0003546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"increased number of double-strand break sites","synonyms":[{"name":"accumulation of DNA damage foci","type":"related"},{"name":"accumulation of double-strand break sites","type":"exact"},{"name":"increased number of DNA damage foci","type":"related"}],"termid":"FYPO:0003543"}


id: GO:0005907
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete HA1 clathrin adaptor (obsolete GO:0005907)","synonyms":[{"name":"AP1","type":"related"},{"name":"HA1 clathrin adaptor","type":"exact"}],"termid":"GO:0005907"}


id: PBO:0065161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prion like protein doppel","termid":"PBO:0065161"}


id: PBO:0052183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNK15 and WISP2 antisense RNA 1","termid":"PBO:0052183"}


id: PBO:0047477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl diphosphate synthase pseudogene 4","termid":"PBO:0047477"}


id: PBO:0064926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 6 catalytic subunit pseudogene","termid":"PBO:0064926"}


id: PBO:0031703
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_nuclear_export","termid":"PBO:0031703"}


id: FYPO:0005221
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein oligomerization is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0051259","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal protein oligomerization","synonyms":[{"name":"normal protein oligomerisation","type":"exact"},{"name":"normal protein oligomerization during mitotic cell cycle","type":"related"},{"name":"normal protein oligomerization during vegetative growth","type":"exact"}],"termid":"FYPO:0005221"}


id: PBO:0078032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 22","termid":"PBO:0078032"}


id: PBO:0088689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, thiamine pyrophosphate","termid":"PBO:0088689"}


id: PBO:0040305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP2C2 antisense RNA 1","termid":"PBO:0040305"}


id: GO:0050102
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,4-beta-D-glucosyl(n) + phosphate = 1,4-beta-D-glucosyl(n-1) + alpha-D-glucose 1-phosphate.","definition_xrefs":["EC:2.4.1.49","MetaCyc:CELLODEXTRIN-PHOSPHORYLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cellodextrin phosphorylase activity","secondary_identifiers":["RHEA:23024"],"synonyms":[{"name":"1,4-beta-D-oligo-D-glucan:phosphate alpha-D-glucosyltransferase activity","type":"related"},{"name":"beta-1,4-oligoglucan:orthophosphate glucosyltransferase activity","type":"related"}],"termid":"GO:0050102"}


id: PBO:0003576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial GIDA family tRNA uridine 5-carboxymethylaminomethyl modification enzyme (predicted)","termid":"PBO:0003576"}


id: GO:0102624
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + scutellarein 7-methyl ether = H+ + ladanein + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:73239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"scutellarein 7-methyl ether 4'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-15529"],"termid":"GO:0102624"}


id: FYPO:0004911
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of glutathione into the vacuole does not occur.","definition_xrefs":["GO:0071996","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar transport during vegetative growth","termid":"FYPO:0000597"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished glutathione import into vacuole","synonyms":[{"name":"abolished glutathione import into vacuole during mitotic cell cycle","type":"related"},{"name":"abolished glutathione import into vacuole during vegetative growth","type":"exact"},{"name":"abolished glutathione transmembrane import into vacuole","type":"exact"},{"name":"glutathione import into vacuole abolished","type":"exact"}],"termid":"FYPO:0004911"}


id: GO:0005310
data:
  {"annotated_genes":["SJAG_00522","SJAG_01406","SJAG_00671","SJAG_02140"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015139"},{"annotations":[84485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034658"},{"annotations":[92626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015183"},{"annotations":[97716,114517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015140"},{"annotations":[97717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015366"},{"annotations":[97718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901239"},{"annotations":[84486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015131"},{"annotations":[97719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015141"},{"annotations":[97720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097434"}]},"cv_name":"molecular_function","definition":"Enables the transfer of dicarboxylic acids from one side of a membrane to the other. A dicarboxylic acid is an organic acid with two COOH groups.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_00671":null,"SJAG_01406":null,"SJAG_02140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"dicarboxylic acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-372843","GO:0005312","GO:0015365","Reactome:R-HSA-1614546"],"synonyms":[{"name":"dicarboxylate (succinate/fumarate/malate) antiporter activity","type":"related"},{"name":"dicarboxylate carrier","type":"narrow"},{"name":"dicarboxylic acid permease activity","type":"related"},{"name":"sodium:dicarboxylate/tricarboxylate symporter activity","type":"narrow"}],"termid":"GO:0005310","terms_by_termid":{"GO:0015131":null,"GO:0015139":null,"GO:0015140":null,"GO:0015141":null,"GO:0015183":null,"GO:0015366":null,"GO:0034658":null,"GO:0097434":null,"GO:1901239":null}}


id: PR:Q09684
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tht1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear fusion protein tht1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13C5.03","synonyms":[{"name":"Spom972h-tht1","type":"exact"},{"name":"Twin horsetail protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09684"}


id: FYPO:0004571
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to hydrogen peroxide is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during cellular response to oxidative stress","termid":"FYPO:0001279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased RNA level during cellular response to hydrogen peroxide","synonyms":[{"name":"increased RNA accumulation during cellular response to hydrogen peroxide","type":"related"},{"name":"increased RNA level during cellular response to H2O2","type":"exact"},{"name":"increased RNA level during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"increased mRNA level during cellular response to hydrogen peroxide","type":"narrow"},{"name":"increased transcript level during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0004571"}


id: PBO:0002829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element","termid":"PBO:0002829"}


id: PBO:0073278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 12","termid":"PBO:0073278"}


id: PBO:0045675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DYNC1LI2 divergent transcript","termid":"PBO:0045675"}


id: GO:0060222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the process in which a cell becomes committed to a retinal cone cell fate. Retinal cone cell fate commitment is the process in which the developmental fate of a cell becomes restricted such that it will develop into a retinal cone cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate commitment","termid":"GO:0010453"},{"relation_name":"regulates","term_name":"retinal cone cell fate commitment","termid":"GO:0046551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of retinal cone cell fate commitment","termid":"GO:0060222"}


id: GO:0061317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes. In this pathway, the activated receptor signals via downstream effectors that result in the inhibition of beta-catenin phosphorylation, thereby preventing degradation of beta-catenin and contributing to cardiac muscle cell fate commitment. Stabilized beta-catenin can then accumulate and travel to the nucleus to trigger changes in transcription of target genes.","definition_xrefs":["PMID:17576928","GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment (obsolete GO:0061317)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"}],"termid":"GO:0061317"}


id: GO:0021950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation and reception of signals that repel a precerebellar neuron as a component of the process of tangential migration.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:cls","GOC:dph","PMID:15157725","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative chemotaxis","termid":"GO:0050919"},{"relation_name":"part_of","term_name":"brainstem precerebellar neuron precursor migration","termid":"GO:0021949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemorepulsion involved in precerebellar neuron migration","synonyms":[{"name":"negative chemotaxis involved in precerebellar neuron migration","type":"exact"}],"termid":"GO:0021950"}


id: PBO:0079033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon AAC) 2-1","termid":"PBO:0079033"}


id: GO:0034650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cortisol, the steroid hormone 11-beta-17,21-trihydroxypregn-4-ene-3,20-dione. Cortisol is synthesized from cholesterol in the adrenal gland and controls carbohydrate, fat and protein metabolism and has anti-inflammatory properties.","definition_xrefs":["GOC:BHF","GOC:mah","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucocorticoid metabolic process","termid":"GO:0008211"},{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"},{"relation_name":"is_a","term_name":"tertiary alcohol metabolic process","termid":"GO:1902644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"cortisol metabolic process","synonyms":[{"name":"cortisol metabolism","type":"exact"}],"termid":"GO:0034650"}


id: PBO:0086337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pseudogenic fragment with similarity to flocculins; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; SWAT-GFP, seamless-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; YHR212W-A has a paralog, YAR061W, that arose from a segmental duplication","termid":"PBO:0086337"}


id: PBO:0000480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phosphorylceramide synthase Aur1 (predicted)","termid":"PBO:0000480"}


id: PBO:0108893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 6","termid":"PBO:0108893"}


id: FYPO:0001724
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of GTP binding by a gene product (usually a protein) in a mutant is increased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal GTP binding","termid":"FYPO:0001528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"increased GTP binding","termid":"FYPO:0001724"}


id: PBO:0082664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the conserved oligomeric Golgi complex; a cytosolic tethering complex (Cog1p through Cog8p) that functions in protein trafficking to mediate fusion of transport vesicles to Golgi compartments","termid":"PBO:0082664"}


id: PBO:0089981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoserine kinase Thr1","termid":"PBO:0089981"}


id: GO:1900558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving austinol.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"austinol metabolic process","synonyms":[{"name":"austinol metabolism","type":"exact"}],"termid":"GO:1900558"}


id: GO:0033813
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + deacetylcephalosporin C = cephalosporin C + CoA.","definition_xrefs":["EC:2.3.1.175","RHEA:23860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-acyltransferase activity","termid":"GO:0016408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"deacetylcephalosporin-C acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03064","MetaCyc:2.3.1.175-RXN"],"synonyms":[{"name":"CPC acetylhydrolase activity","type":"related"},{"name":"DAC acetyltransferase activity","type":"related"},{"name":"DAC-AT","type":"related"},{"name":"acetyl coenzyme A:DAC acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:DAC O-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:DAC acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:deacetylcephalosporin-C O-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:deacetylcephalosporin-C acetyltransferase activity","type":"related"},{"name":"cefG","type":"related"},{"name":"deacetylcephalosporin C acetyltransferase activity","type":"related"}],"termid":"GO:0033813"}


id: GO:2000402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lymphocyte migration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mononuclear cell migration","termid":"GO:0071676"},{"relation_name":"is_a","term_name":"regulation of lymphocyte migration","termid":"GO:2000401"},{"relation_name":"negatively_regulates","term_name":"lymphocyte migration","termid":"GO:0072676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lymphocyte migration","termid":"GO:2000402"}


id: PBO:0072694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUNX3 antisense RNA 1","termid":"PBO:0072694"}


id: PBO:0090159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin cortical patch component End3","termid":"PBO:0090159"}


id: GO:0009425
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"One of the three major substructures of the bacterial-type flagellum, the basal body is embedded in the cell envelope (the plasma membrane, peptidoglycan cell wall, and, if one is present, the outer membrane); it houses the secretion apparatus that exports the more distal components and the flagellar motor.","definition_xrefs":["PMID:10572114","PMID:12624192","PMID:24697492","GOC:cilia","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacterial-type flagellum","termid":"GO:0009288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial-type flagellum basal body","synonyms":[{"name":"flagellar basal body","type":"broad"},{"name":"flagellin-based flagellum basal body","type":"exact"}],"termid":"GO:0009425"}


id: PBO:0077479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 200B","termid":"PBO:0077479"}


id: PBO:0051539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 6","termid":"PBO:0051539"}


id: PBO:0049874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatic and glial cell adhesion molecule","termid":"PBO:0049874"}


id: GO:0035728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hepatocyte growth factor stimulus.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to growth factor","termid":"GO:0070848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hepatocyte growth factor","synonyms":[{"name":"response to HGF stimulus","type":"exact"},{"name":"response to hepatocyte growth factor stimulus","type":"exact"}],"termid":"GO:0035728"}


id: PBO:0082780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the SWR1 complex; complex exchanges histone variant H2AZ (Htz1p) for chromatin-bound histone H2A; protein abundance increases in response to DNA replication stress; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0082780"}


id: PATO:0001785
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved outward.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splayed","synonyms":[{"name":"flared","type":"exact"}],"termid":"PATO:0001785"}


id: FYPO:0005589
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylserine measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular phosphorus level","termid":"FYPO:0001543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular phosphatidylserine level","synonyms":[{"name":"normal cellular PS level","type":"exact"},{"name":"normal cellular phosphatidylserine accumulation","type":"related"},{"name":"normal cellular phosphatidylserine level during mitotic cell cycle","type":"related"},{"name":"normal cellular phosphatidylserine level during vegetative growth","type":"exact"}],"termid":"FYPO:0005589"}


id: PBO:0072855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretion associated Ras related GTPase 1B","termid":"PBO:0072855"}


id: PR:O94661
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TBC1 domain family member 20 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02782","PANTHER:PTHR20913:SF7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein gyp10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.03c","secondary_identifiers":["UniProtKB:O94661"],"synonyms":[{"name":"Spom972h-TBC1D20","type":"exact"}],"termid":"PR:O94661"}


id: GO:0010689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the synthesis of RNA from ribosomal protein genes by RNA polymerase II, originating at an RNA polymerase II promoter, as a result of a chemical stimulus.","definition_xrefs":["GOC:dph","GOC:tb","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ribosomal protein gene transcription by RNA polymerase II","termid":"GO:0010688"},{"relation_name":"part_of","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0006355","GO:0010467"],"is_obsolete":false,"name":"negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter in response to chemical stimulus","termid":"GO:0010689"}


id: PBO:0091490
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"accumulation and persistence of Swi5 foci in rad54delta cells","termid":"PBO:0091490"}


id: PBO:0091409
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"during meiotic recombination Rad51 foci partially colocalize with linear elements","termid":"PBO:0091409"}


id: GO:0045127
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-D-glucosamine + ATP = N-acetyl-D-glucosamine 6-phosphate + ADP + H+.","definition_xrefs":["RHEA:17417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"N-acetylglucosamine kinase activity","secondary_identifiers":["MetaCyc:N-ACETYLGLUCOSAMINE-KINASE-RXN","Reactome:R-HSA-6803771","EC:2.7.1.59","KEGG_REACTION:R01201"],"synonyms":[{"name":"2-acetylamino-2-deoxy-D-glucose kinase activity","type":"related"},{"name":"ATP:2-acetylamino-2-deoxy-D-glucose 6-phosphotransferase activity","type":"related"},{"name":"ATP:N-acetyl-D-glucosamine 6-phosphotransferase activity","type":"related"},{"name":"GlcNAc kinase activity","type":"related"},{"name":"acetylaminodeoxyglucokinase activity","type":"related"},{"name":"acetylglucosamine kinase (phosphorylating)","type":"related"}],"termid":"GO:0045127"}


id: PBO:0073543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain and tetratricopeptide repeats 1","termid":"PBO:0073543"}


id: PBO:0065751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PYDC2 antisense RNA 1","termid":"PBO:0065751"}


id: PATO:0001669
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A susceptibility toward an external stimulus which is higher than normal/average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"susceptible toward","termid":"PATO:0001152"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased susceptibility toward","synonyms":[{"name":"high susceptibility toward","type":"exact"},{"name":"increased susceptibility","type":"exact"}],"termid":"PATO:0001669"}


id: PBO:0000795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase Rrp8 (predicted)","termid":"PBO:0000795"}


id: PBO:0080254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 17 pseudogene","termid":"PBO:0080254"}


id: PBO:0017064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug174","termid":"PBO:0017064"}


id: GO:0018361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The methylation of glutamine to form 2-methyl-L-glutamine.","definition_xrefs":["RESID:AA0273","PMID:10660523"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-glutamine 2-methylation (obsolete GO:0018361)","termid":"GO:0018361"}


id: GO:1903415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of flavonoid from endoplasmic reticulum to plant-type vacuole.","definition_xrefs":["GOC:tb","GOC:TermGenie","PMID:25116949","GO_REF:0000078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"flavonoid transport from endoplasmic reticulum to plant-type vacuole","synonyms":[{"name":"flavonoid accumulation in vacuole","type":"related"}],"termid":"GO:1903415"}


id: PBO:0069595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 871, pseudogene","termid":"PBO:0069595"}


id: PBO:0004540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-B homolog","termid":"PBO:0004540"}


id: FYPO:0007199
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mRNA splicing via the spliceosome of introns that have one or more deviations from optimal cis-splicing sequences is decreased. Nonconsensus features may include a longer distance between the branch point and 3' splice site, lacking a polypyrimidine tract, or use of alternative 5' splice sites.","definition_xrefs":["PMID:28446597","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mRNA splicing, via spliceosome, intron-specific","termid":"FYPO:0003244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000294"],"is_obsolete":false,"name":"decreased splicing of mRNA introns with nonconsensus cis-splicing sequences","synonyms":[{"name":"decreased mRNA splicing, via spliceosome, introns with nonconsensus cis-splicing sequences","type":"exact"},{"name":"decreased nuclear mRNA splicing, via spliceosome, introns with nonconsensus cis-splicing sequences","type":"exact"},{"name":"decreased splicing of mRNA introns with nonconsensus cis-splicing sequences","type":"broad"},{"name":"decreased splicing of mRNA introns with nonconsensus cis-splicing sequences during mitotic cell cycle","type":"related"},{"name":"decreased splicing of mRNA introns with nonconsensus cis-splicing sequences during vegetative growth","type":"exact"},{"name":"reduced splicing of mRNA introns with nonconsensus cis-splicing sequences","type":"exact"}],"termid":"FYPO:0007199"}


id: PBO:0050655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 90 alpha family class B member 5, pseudogene","termid":"PBO:0050655"}


id: PBO:0066019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN binding protein 1","termid":"PBO:0066019"}


id: PBO:0002672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome component Ecm29","termid":"PBO:0002672"}


id: GO:1990416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a brain-derived neurotrophic factor stimulus.","definition_xrefs":["PMID:21958434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nerve growth factor stimulus","termid":"GO:1990090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to brain-derived neurotrophic factor stimulus","synonyms":[{"name":"cellular response to BDNF stimulus","type":"exact"}],"termid":"GO:1990416"}


id: PR:O14327
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A polyadenylate-binding protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyadenylate-binding protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.12c","secondary_identifiers":["UniProtKB:O14327"],"synonyms":[{"name":"PABII (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PABP-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC16E9.12c","type":"related"},{"name":"Spom972h-PABPN1","type":"exact"},{"name":"poly(A)-binding protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"poly(A)-binding protein II (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14327"}


id: PBO:0041147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTF3 pseudogene 2","termid":"PBO:0041147"}


id: GO:1902276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pancreatic amylase secretion.","definition_xrefs":["GOC:jc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein secretion","termid":"GO:0050708"},{"relation_name":"regulates","term_name":"pancreatic amylase secretion","termid":"GO:0036395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of pancreatic amylase secretion","termid":"GO:1902276"}


id: FYPO:0004261
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during G2 phase of the mitotic cell cycle and during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during cellular response to ionizing radiation","termid":"FYPO:0002470"},{"relation_name":"is_a","term_name":"decreased protein phosphorylation during mitotic G2 phase","termid":"FYPO:0004111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0001320","FYPO:0002274","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein phosphorylation during mitotic G2 phase during cellular response to ionizing radiation","synonyms":[{"name":"decreased protein phosphorylation during cellular response to ionizing radiation during G2 phase of mitotic cell cycle","type":"exact"},{"name":"decreased protein phosphorylation during cellular response to ionizing radiation during mitotic G2 phase","type":"exact"},{"name":"decreased protein phosphorylation during mitotic G2 phase during cellular response to IR","type":"exact"},{"name":"decreased protein phosphorylation during mitotic G2 phase during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"reduced protein phosphorylation during mitotic G2 phase during cellular response to IR","type":"exact"},{"name":"reduced protein phosphorylation during mitotic G2 phase during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0004261"}


id: PBO:0050253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 31","termid":"PBO:0050253"}


id: PBO:0082827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved protein involved in autophagy; interacts with Atg12p-Atg5p conjugates to form Atg12p-Atg5p-Atg16p multimers, which binds to membranes and localizes to the pre-autophagosomal structure and are required for autophagy; relocalizes from nucleus to cytoplasmic foci upon DNA replication stress","termid":"PBO:0082827"}


id: PBO:0034474
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_spatial_extent_of_protein_localization_to_double-strand_break_site","termid":"PBO:0034474"}


id: PBO:0064670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 5","termid":"PBO:0064670"}


id: GO:0140481
data:
  {"annotated_genes":["SJAG_02457"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85340],"is_not":false,"summary":null,"term":"GO:0140481"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + iron-sulfur cluster(in) = ADP + phosphate + iron-sulfur cluster(out).","definition_xrefs":["PMID:31040179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ABC-type iron-sulfur cluster transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["TC:3.A.1.210.1"],"synonyms":[{"name":"ATPase-coupled Fe-S cluster transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled iron-sulfur cluster transmembrane transporter activity","type":"related"}],"termid":"GO:0140481","terms_by_termid":{"GO:0140481":null}}


id: FYPO:0007757
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the new mitotic spindle pole body is normal (i.e. indistinguishable from wild type) during anaphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to new mitotic spindle pole body","termid":"FYPO:0003330"},{"relation_name":"is_a","term_name":"normal protein localization to mitotic spindle pole body during anaphase","termid":"FYPO:0007568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to new mitotic spindle pole body during anaphase","synonyms":[{"name":"normal asymmetric protein localization to new mitotic spindle pole body during anaphase","type":"exact"},{"name":"normal protein localisation to new mitotic spindle pole body during anaphase","type":"exact"},{"name":"normal protein localization to new mitotic SPB during anaphase","type":"exact"},{"name":"normal protein localization to new mitotic spindle pole body during anaphase of mitotic cell cycle","type":"exact"},{"name":"normal protein localization to new spindle pole body during anaphase during vegetative growth","type":"exact"},{"name":"normal protein localization to new spindle pole body during mitotic anaphase","type":"exact"}],"termid":"FYPO:0007757"}


id: PBO:0047270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 247 member B","termid":"PBO:0047270"}


id: GO:0075196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a haustorium mother cell of the symbiont to its host via adhesion molecules. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont infection structure to host","termid":"GO:0075001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion of symbiont haustorium mother cell to host","synonyms":[{"name":"adhesion of symbiont haustorium mother cell to host during symbiotic interaction","type":"exact"}],"termid":"GO:0075196"}


id: PBO:0038799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 5 (pseudogene)","termid":"PBO:0038799"}


id: FYPO:0004789
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which telomeres have fused, forming circular chromosomes, during G2 phase of the mitotic cell cycle.","definition_xrefs":["PMID:25533340","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circularized chromosome","termid":"FYPO:0002702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0001320","FYPO:0000641","FYPO:0000661","FYPO:0005447","FYPO:0000654"],"is_obsolete":false,"name":"circularized chromosome during mitotic G2 phase","synonyms":[{"name":"circular chromosomes during mitotic G2 phase","type":"exact"},{"name":"circularised chromosome during mitotic G2 phase","type":"exact"},{"name":"circularized chromosome during G2 during vegetative growth","type":"exact"},{"name":"fused telomeres during mitotic G2 phase","type":"related"},{"name":"telomere end fusion during mitotic G2 phase","type":"related"},{"name":"telomere fusion during mitotic G2 phase","type":"related"},{"name":"telomeres fused during mitotic G2 phase","type":"related"}],"termid":"FYPO:0004789"}


id: FYPO:0006813
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 9 of histone H3 in centromere inner repeat regions does not occur.","definition_xrefs":["PMID:30652128","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K9 methylation during vegetative growth","termid":"FYPO:0002566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abolished histone H3-K9 trimethylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"abolished histone H3 K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 trimethylation at centromere CENP-A containing region during vegetative growth","type":"related"},{"name":"abolished histone H3-K9 trimethylation at centromere imr during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 trimethylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"abolished histone H3-K9 trimethylation at centromere inner repeat region during vegetative growth","type":"exact"},{"name":"abolished histone H3K9me3 at centromere inner repeat during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"histone H3-K9 trimethylation abolished at centromere inner repeat during vegetative growth","type":"exact"},{"name":"histone H3-K9 trimethylation absent at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0006813"}


id: GO:0040028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of development of the vulva. Vulval development is the process whose specific outcome is the progression of the egg-laying organ of female and hermaphrodite nematodes over time, from its formation to the mature structure. In nematodes, the vulva is formed from ventral epidermal cells during larval stages to give rise to a fully formed vulva in the adult.","definition_xrefs":["GOC:kmv","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"vulval development","termid":"GO:0040025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vulval development","termid":"GO:0040028"}


id: PR:Q9Y7K2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase mTOR that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02637","PANTHER:PTHR11139:SF9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 3-kinase tor2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC216.07c","secondary_identifiers":["UniProtKB:Q9Y7K2"],"synonyms":[{"name":"PI3-kinase tor2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PI3K tor2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PtdIns-3-kinase tor2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MTOR","type":"exact"}],"termid":"PR:Q9Y7K2"}


id: PBO:0086136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for membrane insertion of C-terminus of Cox2p; mitochondrial integral inner membrane protein; interacts genetically and physically with Mss2p and Pnt1p; similar to S. cerevisiae Oxa1, N. crassa Oxa2p, and E. coli YidC; respiratory defect of the null mutant is functionally complemented by human COX18 carrying the N-terminal 54 amino acids of S. cerevisiae Cox18p","termid":"PBO:0086136"}


id: GO:1904738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a vascular associated smooth muscle cell from one site to another.","definition_xrefs":["GO_REF:0000091","PMID:20693317","GOC:BHF","GOC:TermGenie","GOC:rph","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle cell migration","termid":"GO:0014909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle cell migration","synonyms":[{"name":"vascular smooth muscle cell migration","type":"exact"}],"termid":"GO:1904738"}


id: PBO:0054438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1834","termid":"PBO:0054438"}


id: PBO:0089949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biotin-protein ligase Bpl1","termid":"PBO:0089949"}


id: PBO:0091774
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"II:g.2219928_2219929insT","termid":"PBO:0091774"}


id: GO:2000254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of male germ cell proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of germ cell proliferation","termid":"GO:1905936"},{"relation_name":"regulates","term_name":"male germ cell proliferation","termid":"GO:0002176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of male germ cell proliferation","termid":"GO:2000254"}


id: PBO:0086576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; deletion causes sensitivity to unfolded protein response-inducing agents","termid":"PBO:0086576"}


id: PBO:0091439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prospore membrane copper transmembrane transporter Mfc1","termid":"PBO:0091439"}


id: PBO:0043551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type IV alpha 2 chain","termid":"PBO:0043551"}


id: PBO:0079152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 12","termid":"PBO:0079152"}


id: FYPO:0000979
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing miconazole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002057","FYPO:0000003","FYPO:0002058","FYPO:0002060","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on miconazole","synonyms":[{"name":"normal cell population growth on miconazole","type":"exact"},{"name":"normal vegetative cell population growth on miconazole","type":"exact"}],"termid":"FYPO:0000979"}


id: GO:0101019
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonuclease complex that has 3-prime to 5-prime distributive hydrolytic exoribonuclease activity and in some taxa (e.g. yeast) endoribonuclease activity, producing 5-prime-phosphomonoesters. Participates in a multitude of cellular RNA processing and degradation events preventing nuclear export and/or translation of aberrant RNAs. Restricted to processing linear and circular single-stranded RNAs (ssRNA) only. RNAs with complex secondary structures may have to be unwound or pre-processed by co-factors prior to entering the complex, esp if the 3-prime end is structured.","definition_xrefs":["PMID:17174896","PMID:26726035","PMID:20531386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear exosome (RNase complex)","termid":"GO:0000176"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005730"}],"interesting_parent_ids":["GO:0005730","GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"nucleolar exosome (RNase complex)","termid":"GO:0101019"}


id: PBO:0005201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein Mis16","termid":"PBO:0005201"}


id: GO:0045544
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the oxidation of C-20 gibberellins to form the corresponding C-19 lactones.","definition_xrefs":["PMID:7604047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"gibberellin 20-oxidase activity","termid":"GO:0045544"}


id: PBO:0055998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM1 homolog, mRNA degradation associated pseudogene 1","termid":"PBO:0055998"}


id: PBO:0091510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide exchange factor for the ER lumenal Hsp70 chaperone, Sil1","termid":"PBO:0091510"}


id: PBO:0030370
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_mitotic_DNA_replication_initiation","termid":"PBO:0030370"}


id: PBO:0044938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"7-dehydrocholesterol reductase","termid":"PBO:0044938"}


id: PBO:0066674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBPJ interacting and tubulin associated 1","termid":"PBO:0066674"}


id: PBO:0046529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum protein 29","termid":"PBO:0046529"}


id: PBO:0070917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 25","termid":"PBO:0070917"}


id: PBO:0078637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid hormone receptor interactor 11","termid":"PBO:0078637"}


id: GO:0042018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-22 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-22 receptor activity","synonyms":[{"name":"IL-22 receptor activity","type":"exact"},{"name":"IL-22R","type":"exact"}],"termid":"GO:0042018"}


id: PBO:0004838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med7","termid":"PBO:0004838"}


id: GO:0017153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"},{"relation_name":"is_a","term_name":"organic acid:sodium symporter activity","termid":"GO:0005343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"sodium:dicarboxylate symporter activity","synonyms":[{"name":"sodium:dicarboxylate cotransporter activity","type":"broad"}],"termid":"GO:0017153"}


id: PBO:0075809
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id: PBO:0045035
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id: PBO:0069453
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id: GO:0071013
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id: RO:0001019
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id: PBO:0059696
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id: PBO:0005102
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id: PBO:0071490
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id: FYPO:0008176
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id: GO:0031966
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membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0031966","terms_by_termid":{"GO:0001401":null,"GO:0001405":null,"GO:0005741":null,"GO:0005742":null,"GO:0005743":null,"GO:0005744":null,"GO:0005745":null,"GO:0031314":null,"GO:0031315":null,"GO:0031942":null,"GO:0031966":null,"GO:0032473":null,"GO:0032478":null,"GO:0032865":null,"GO:0036266":null,"GO:0042720":null,"GO:0042721":null,"GO:0044284":null,"GO:0061617":null,"GO:0099616":null,"GO:0099617":null,"GO:0140275":null,"GO:0140595":null,"GO:1990524":null}}


id: GO:0033463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GGA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"GGA codon-amino acid adaptor activity","synonyms":[{"name":"glycine tRNA","type":"related"}],"termid":"GO:0033463"}


id: PBO:0089744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic pyrophosphatase Ipp1","termid":"PBO:0089744"}


id: GO:0042188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 1,1,1-trichloro-2,2-bis-(4-chlorophenyl)ethane (DDT), a chlorinated broad spectrum contact insecticide.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1,1,1-trichloro-2,2-bis-(4-chlorophenyl)ethane metabolic process","termid":"GO:0018977"},{"relation_name":"is_a","term_name":"chlorinated hydrocarbon catabolic process","termid":"GO:0042205"},{"relation_name":"is_a","term_name":"insecticide catabolic process","termid":"GO:0046701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0019748","GO:0098754"],"is_obsolete":false,"name":"1,1,1-trichloro-2,2-bis-(4-chlorophenyl)ethane catabolic process","synonyms":[{"name":"1,1,1-trichloro-2,2-bis-(4-chlorophenyl)ethane breakdown","type":"exact"},{"name":"1,1,1-trichloro-2,2-bis-(4-chlorophenyl)ethane catabolism","type":"exact"},{"name":"1,1,1-trichloro-2,2-bis-(4-chlorophenyl)ethane degradation","type":"exact"},{"name":"DDT catabolic process","type":"exact"},{"name":"DDT catabolism","type":"exact"}],"termid":"GO:0042188"}


id: MOD:00683
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes neutral hydrogen atoms (proton and electron) from a residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidized residue","termid":"MOD:00675"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenated residue","synonyms":[{"name":"dHRes","type":"exact"}],"termid":"MOD:00683"}


id: GO:0048166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stage in oogenesis when the antrum is swollen with follicular fluid. The ovum is ready to erupt from the ovary and is arrested at metaphase of the second meiotic division.","definition_xrefs":["GOC:jid","GOC:mtg_sensu","ISBN:0198542771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammalian oogenesis stage","termid":"GO:0022605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mature follicle stage","synonyms":[{"name":"mammalian oogenesis stage 9","type":"exact"}],"termid":"GO:0048166"}


id: GO:0004154
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 7,8-dihydropteridine + O2 = a pterin + hydrogen peroxide.","definition_xrefs":["PMID:6815189","PMID:38786926","PMID:1745247","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","termid":"GO:0016647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dihydropterin oxidase activity","secondary_identifiers":["MetaCyc:RXN-15269"],"termid":"GO:0004154"}


id: PBO:0061984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily B member 3","termid":"PBO:0061984"}


id: GO:0070219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A homeostatic process involved in the maintenance of a steady state level of sulfide ions within a cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intracellular sulfide ion homeostasis (obsolete GO:0070219)","synonyms":[{"name":"cellular sulfide homeostasis","type":"exact"},{"name":"cellular sulfide ion homeostasis","type":"exact"},{"name":"cellular sulphide homeostasis","type":"exact"},{"name":"cellular sulphide ion homeostasis","type":"exact"}],"termid":"GO:0070219"}


id: PBO:0074530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA D","termid":"PBO:0074530"}


id: GO:0018621
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-sulfobenzoate + H+ + NADH + O2 = 3,4-dihydroxybenzoate + NAD+ + sulfite.","definition_xrefs":["RHEA:13937","EC:1.14.12.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-sulfobenzoate 3,4-dioxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0293","KEGG_REACTION:R01636","MetaCyc:4-SULFOBENZOATE-34-DIOXYGENASE-RXN"],"synonyms":[{"name":"4-sulfobenzoate 3,4-dioxygenase system","type":"related"},{"name":"4-sulfobenzoate dioxygenase activity","type":"related"},{"name":"4-sulfobenzoate,NADH:oxygen oxidoreductase (3,4-hydroxylating, sulfite-forming)","type":"related"},{"name":"4-sulphobenzoate 3,4-dioxygenase activity","type":"exact"}],"termid":"GO:0018621"}


id: PBO:0110331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit f pseudogene 7","termid":"PBO:0110331"}


id: PBO:0089872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate beta-D-mannosyltransferase catalytic subunit Dpm1","termid":"PBO:0089872"}


id: GO:0015640
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of peptidoglycan peptides from one side of a membrane to the other. Peptidoglycan peptides are the oligopeptides found in peptidoglycan networks which cross-link the polysaccharide chains.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidoglycan transmembrane transporter activity","termid":"GO:0015647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"peptidoglycan peptide transmembrane transporter activity","synonyms":[{"name":"murein peptide transporter activity","type":"exact"},{"name":"muropeptide transporter activity","type":"exact"}],"termid":"GO:0015640"}


id: PBO:0013020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA recombination protein Rad52 (previously Rad22)","termid":"PBO:0013020"}


id: PBO:0045586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine triphosphatase pseudogene 8","termid":"PBO:0045586"}


id: GO:0043527
data:
  {"annotated_genes":["SJAG_04890","SJAG_02386","SJAG_04848","SJAG_02637","SJAG_04680","SJAG_04181"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97026,108209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031515"},{"annotations":[100199,92278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043528"},{"annotations":[111780,115050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106143"}]},"cv_name":"cellular_component","definition":"A multimeric protein complex involved in the methylation of specific nucleotides in tRNA.","definition_xrefs":["PMID:24904644","PMID:9851972","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase complex","termid":"GO:0034708"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02386":null,"SJAG_02637":null,"SJAG_04181":null,"SJAG_04680":null,"SJAG_04848":null,"SJAG_04890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"tRNA methyltransferase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043527","terms_by_termid":{"GO:0031515":null,"GO:0043528":null,"GO:0106143":null}}


id: PBO:0052379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 21B","termid":"PBO:0052379"}


id: GO:0102821
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: bixin + S-adenosyl-L-methionine = bixin dimethyl ester + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"bixin methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8239"],"termid":"GO:0102821"}


id: GO:0002227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process of the innate immune response that takes place in the mucosal tissues.","definition_xrefs":["PMID:10719665","PMID:15971105","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucosal immune response","termid":"GO:0002385"},{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"innate immune response in mucosa","termid":"GO:0002227"}


id: PBO:0039274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase like 2","termid":"PBO:0039274"}


id: PBO:0057044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 133b","termid":"PBO:0057044"}


id: GO:0018655
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-oxo-delta3-4,5,5-trimethylcyclopentenylacetyl-CoA + NADH + H+ + O2 = NAD+ + H2O + delta2,5-3,4,4-trimethylpimelyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0430"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-oxo-delta3-4,5,5-trimethylcyclopentenylacetyl-CoA 1,2-monooxygenase activity (obsolete GO:0018655)","termid":"GO:0018655"}


id: PBO:0053301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lin-7 homolog C, crumbs cell polarity complex component","termid":"PBO:0053301"}


id: RO:0009501
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"r 'realized in response to' s iff, r is a realizable (e.g. a plant trait such as responsivity to drought), s is an environmental stimulus (a process), and s directly causes the realization of r.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"RO:0002410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"realized_in_response_to","termid":"RO:0009501"}


id: GO:0033907
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal non-reducing beta-D-fucose residues in beta-D-fucosides.","definition_xrefs":["EC:3.2.1.38"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"beta-D-fucosidase activity","secondary_identifiers":["MetaCyc:3.2.1.38-RXN"],"synonyms":[{"name":"beta-D-fucoside fucohydrolase activity","type":"related"},{"name":"beta-fucosidase activity","type":"related"}],"termid":"GO:0033907"}


id: PBO:0065181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein S","termid":"PBO:0065181"}


id: PBO:0059694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 2","termid":"PBO:0059694"}


id: GO:0099184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a postsynaptic intermediate filament cytoskeleton.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of cytoskeleton","termid":"GO:0005200"},{"relation_name":"is_a","term_name":"structural constituent of postsynapse","termid":"GO:0099186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of postsynaptic intermediate filament cytoskeleton","termid":"GO:0099184"}


id: PBO:0081617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 546","termid":"PBO:0081617"}


id: PBO:0003523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide pyrophosphatase (predicted)","termid":"PBO:0003523"}


id: PBO:0030367
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multinucleate_multiseptate_vegetative_cell","termid":"PBO:0030367"}


id: PATO:0001563
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A mass which is higher than normal or average.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"mass","termid":"PATO:0000125"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased mass","secondary_identifiers":["PATO:0000578"],"synonyms":[{"name":"high mass","type":"exact"},{"name":"large mass","type":"exact"}],"termid":"PATO:0001563"}


id: PBO:0086662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified based on comparisons of the genome sequences of six Saccharomyces species; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum","termid":"PBO:0086662"}


id: GO:0019533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cellobiose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Cellobiose, or 4-O-beta-D-glucopyranosyl-D-glucose, is a disaccharide that represents the basic repeating unit of cellulose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide transport","termid":"GO:0015766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"cellobiose transport","termid":"GO:0019533"}


id: GO:0009107
data:
  {"annotated_genes":["SJAG_03198","SJAG_03553"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93233,108747],"is_not":false,"summary":null,"term":"GO:0009107"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lipoate, 1,2-dithiolane-3-pentanoate, the anion derived from lipoic acid.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid biosynthetic process","termid":"GO:0006633"},{"relation_name":"is_a","term_name":"lipoate metabolic process","termid":"GO:0009106"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03198":null,"SJAG_03553":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"lipoate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0009105"],"synonyms":[{"name":"lipoate anabolism","type":"exact"},{"name":"lipoate biosynthesis","type":"exact"},{"name":"lipoate formation","type":"exact"},{"name":"lipoate synthesis","type":"exact"},{"name":"lipoic acid anabolism","type":"exact"},{"name":"lipoic acid biosynthesis","type":"exact"},{"name":"lipoic acid biosynthetic process","type":"exact"},{"name":"lipoic acid formation","type":"exact"},{"name":"lipoic acid synthesis","type":"exact"}],"termid":"GO:0009107","terms_by_termid":{"GO:0009107":null}}


id: PBO:0091459
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I:g.3197528_3197529insG","termid":"PBO:0091459"}


id: PBO:0077409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 144","termid":"PBO:0077409"}


id: PBO:0084453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannosylinositol phosphorylceramide (MIPC) synthase catalytic subunit; forms a complex with regulatory subunit Csg2p; function in sphingolipid biosynthesis is overlapping with that of Csh1p; SUR1 has a paralog, CSH1, that arose from the whole genome duplication","termid":"PBO:0084453"}


id: PBO:0040889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein 15","termid":"PBO:0040889"}


id: GO:0089715
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + tRNA containing N6-threonylcarbamoyladenosine at position 37 = S-adenosyl-L-homocysteine + tRNA containing N6-methylthreonylcarbamoyladenosine at position 37.","definition_xrefs":["PMID:25063302","RHEA:70027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (adenine) methyltransferase activity","termid":"GO:0016426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0140098","GO:0003824","GO:0140101","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"tRNA (L-threonylcarbamoyladenosine(37)-C2) methyltransferase activity","secondary_identifiers":["MetaCyc:RXN0-7114"],"synonyms":[{"name":"tRNA (L-threonylcarbamoyladenosine(37)-C(2)) methyltransferase activity","type":"exact"},{"name":"tRNA (L-threonylcarbamoyladenosine37-C2-) methyltransferase activity","type":"exact"},{"name":"tRNA m6t6A37 methyltransferase activity","type":"exact"}],"termid":"GO:0089715"}


id: PBO:0080541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain binding protein 1 like","termid":"PBO:0080541"}


id: PBO:0042973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain helicase DNA binding protein 1","termid":"PBO:0042973"}


id: GO:0033811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-coumaroyl-CoA + a flavonol 3-O-[beta-D-glucosyl-(1->2)-beta-D-glucosyl-(1->2)-beta-D-glucoside] = CoA + a flavonol 3-O-[6-(4-coumaroyl)-beta-D-glucosyl-(1->2)-beta-D-glucosyl-(1->2)-beta-D-glucoside].","definition_xrefs":["EC:2.3.1.173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"flavonol-3-O-triglucoside O-coumaroyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.173-RXN","RHEA:22160"],"synonyms":[{"name":"4-coumaroyl-CoA:flavonol-3-O-[beta-D-glucosyl-(1->2)-beta-D-glucosyl-(1->2)-beta-D-glucoside] 6'''-O-4-coumaroyltransferase activity","type":"related"}],"termid":"GO:0033811"}


id: PBO:0061746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor 2 like export factor 1","termid":"PBO:0061746"}


id: PBO:0018024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIIH associated cyclin-dependent protein kinase Mcs6","termid":"PBO:0018024"}


id: PBO:0070378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"roundabout guidance receptor 4","termid":"PBO:0070378"}


id: PBO:0028848
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_stability_during_cellular_response_to_UV","termid":"PBO:0028848"}


id: GO:0018666
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4-dichlorophenol + NADPH + H+ + O2 = 3,5-dichlorocatechol + NADP+ + H2O.","definition_xrefs":["EC:1.14.13.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2,4-dichlorophenol 6-monooxygenase activity","secondary_identifiers":["MetaCyc:24-DICHLOROPHENOL-6-MONOOXYGENASE-RXN","RHEA:20920","UM-BBD_enzymeID:r0275"],"synonyms":[{"name":"2,4-dichlorophenol hydroxylase activity","type":"exact"},{"name":"2,4-dichlorophenol monooxygenase activity","type":"related"},{"name":"2,4-dichlorophenol,NADPH:oxygen oxidoreductase (6-hydroxylating)","type":"related"}],"termid":"GO:0018666"}


id: PBO:0052908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 12-5, pseudogene","termid":"PBO:0052908"}


id: GO:0002210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A behavioral response resulting from wounding.","definition_xrefs":["GO_REF:0000022","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"},{"relation_name":"is_a","term_name":"response to wounding","termid":"GO:0009611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"behavioral response to wounding","synonyms":[{"name":"behavioural response to wounding","type":"exact"}],"termid":"GO:0002210"}


id: PBO:0089110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human NEDD4 family-interacting protein ortholog","termid":"PBO:0089110"}


id: GO:0102040
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: fumarate + a menaquinol = succinate + a menaquinone.","definition_xrefs":["PMID:11850430","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete fumarate reductase (menaquinone) (obsolete GO:0102040)","termid":"GO:0102040"}


id: GO:0020039
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The structure enclosing certain parasite cells such as certain apicomplexa and Euglenozoa; consists of the cell membrane with its associated infrastructure of microtubules, microfilaments and other organelles.","definition_xrefs":["GOC:mah","GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"pellicle","termid":"GO:0020039"}


id: GO:0010263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tricyclic triterpenoid compounds, terpenoids with 6 isoprene units and 3 carbon rings.","definition_xrefs":["GOC:ct"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricyclic triterpenoid metabolic process","termid":"GO:0010683"},{"relation_name":"is_a","term_name":"triterpenoid biosynthetic process","termid":"GO:0016104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"tricyclic triterpenoid biosynthetic process","synonyms":[{"name":"tricyclic triterpenoid anabolism","type":"exact"},{"name":"tricyclic triterpenoid biosynthesis","type":"exact"},{"name":"tricyclic triterpenoid formation","type":"exact"},{"name":"tricyclic triterpenoid synthesis","type":"exact"}],"termid":"GO:0010263"}


id: GO:0008863
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: formate + NAD+ = CO2 + NADH.","definition_xrefs":["RHEA:15985","EC:1.17.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"formate dehydrogenase (NAD+) activity","secondary_identifiers":["KEGG_REACTION:R00519","GO:0018476","UM-BBD_reactionID:r0103","MetaCyc:1.2.1.2-RXN"],"synonyms":[{"name":"NAD-dependent formate dehydrogenase","type":"related"},{"name":"NAD-formate dehydrogenase","type":"related"},{"name":"formate dehydrogenase (NAD)","type":"related"},{"name":"formate hydrogenlyase","type":"related"},{"name":"formate-NAD oxidoreductase","type":"related"},{"name":"formic acid dehydrogenase","type":"related"},{"name":"formic hydrogen-lyase","type":"related"}],"termid":"GO:0008863"}


id: PBO:0068329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF32 divergent transcript","termid":"PBO:0068329"}


id: FYPO:0006244
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic chromosome condensation does not occur over short (less than 90 kb) ranges within a chromosome arm.","definition_xrefs":["PMID:28825727","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abolished short range intra-arm mitotic chromosome condensation during interphase (obsolete FYPO:0006244)","termid":"FYPO:0006244"}


id: GO:2000289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of photoreceptor cell axon guidance.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of axon guidance","termid":"GO:1902667"},{"relation_name":"regulates","term_name":"photoreceptor cell axon guidance","termid":"GO:0072499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of photoreceptor cell axon guidance","synonyms":[{"name":"regulation of photoreceptor cell axon pathfinding","type":"exact"}],"termid":"GO:2000289"}


id: PBO:0110427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP10 pseudogene 2","termid":"PBO:0110427"}


id: PBO:0041485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 98","termid":"PBO:0041485"}


id: PR:O13908
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22A12.17c gene.","definition_xrefs":["UniProtKB:O13908","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C22A12.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.17c","synonyms":[{"name":"Spom972h-SPAC22A12.17c","type":"exact"}],"termid":"PR:O13908"}


id: GO:0102640
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: paspalicine + O2 + NADPH + H+ = paspalinine + NADP + H2O.","definition_xrefs":["EC:1.14.13.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"paspalinine synthase activity","secondary_identifiers":["MetaCyc:RXN-15738"],"termid":"GO:0102640"}


id: FYPO:0005507
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature ribosomal RNA (rRNA) measured in a cell is higher than normal. Total rRNA or a specific rRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered mature rRNA level during vegetative growth","termid":"FYPO:0006468"},{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased mature rRNA level","synonyms":[{"name":"increased mature rRNA accumulation","type":"related"},{"name":"increased mature rRNA level during mitotic cell cycle","type":"related"},{"name":"increased mature rRNA level during vegetative growth","type":"exact"},{"name":"increased mature rRNA transcript level","type":"broad"},{"name":"increased mature ribosomal RNA level","type":"exact"},{"name":"increased rRNA level","type":"broad"}],"termid":"FYPO:0005507"}


id: PBO:0090274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystathionine beta-lyase Cbl1","termid":"PBO:0090274"}


id: MOD:01568
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Applied Biosystems iTRAQ8plex-118 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-118 reporter+balance reagent acylated residue","termid":"MOD:01563"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-118 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01568"}


id: GO:0060569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of peptide hormone processing. Peptide hormone processing is the generation of a mature peptide hormone by posttranslational processing of a prohormone.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein processing","termid":"GO:0010954"},{"relation_name":"is_a","term_name":"positive regulation of hormone metabolic process","termid":"GO:0032352"},{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"regulation of peptide hormone processing","termid":"GO:0060568"},{"relation_name":"positively_regulates","term_name":"peptide hormone processing","termid":"GO:0016486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of peptide hormone processing","termid":"GO:0060569"}


id: SO:0000665
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript that is monocistronic.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"monocistronic","termid":"SO:0000878"},{"relation_name":"is_a","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monocistronic_transcript","synonyms":[{"name":"monocistronic transcript","type":"exact"}],"termid":"SO:0000665"}


id: PBO:0043811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPNE2 divergent transcript","termid":"PBO:0043811"}


id: GO:1904670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any actin filament polymerization that is involved in mitotic actomyosin contractile ring assembly.","definition_xrefs":["PMID:24127216","GOC:TermGenie","GO_REF:0000060"],"gene_count":0,"genotype_count":0,"name":"obsolete actin filament polymerization involved in mitotic actomyosin contractile ring assembly (obsolete GO:1904670)","termid":"GO:1904670"}


id: PBO:0031092
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_cell_at_high_temperature","termid":"PBO:0031092"}


id: PBO:0114279
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologus to S. cerevisiae YOR350C","termid":"PBO:0114279"}


id: GO:0043249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for an erythrocyte to attain its fully functional state.","definition_xrefs":["GOC:jl","GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell maturation","termid":"GO:0048469"},{"relation_name":"part_of","term_name":"erythrocyte development","termid":"GO:0048821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"erythrocyte maturation","synonyms":[{"name":"RBC maturation","type":"exact"},{"name":"red blood cell maturation","type":"exact"}],"termid":"GO:0043249"}


id: PBO:0065611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTP4A1 pseudogene 5","termid":"PBO:0065611"}


id: PBO:0030528
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_medial_cortex_during_vegetative_growth","termid":"PBO:0030528"}


id: PBO:0015656
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kcat/Km 2.1x10^4 min-1 M-1","termid":"PBO:0015656"}


id: PBO:0066069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RARB antisense RNA 1","termid":"PBO:0066069"}


id: PBO:0049261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"goosecoid homeobox 2","termid":"PBO:0049261"}


id: GO:0006678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glucosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of glucose by a ceramide group. They are neutral glycolipids containing equimolar amounts of fatty acid, glucose, and sphingosine or a sphingosine derivative.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylceramide metabolic process","termid":"GO:0006677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"glucosylceramide metabolic process","synonyms":[{"name":"glucosylceramide metabolism","type":"exact"}],"termid":"GO:0006678"}


id: PR:000050399
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A spindle pole body-associated protein cut12 (Schizosaccharomyces pombe) that has been phosphorylated at positions equivalent to Thr-75 and Thr-78 of the amino acid sequence represented by UniProtKB:O59755. Example: UniProtKB:O59755, Thr-75/Thr-78, MOD:00047.","definition_xrefs":["PMID:23333317","PRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body-associated protein cut12 (Schizosaccharomyces pombe)","termid":"PR:000050397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cut12/Phos(T75,T78)","pombase_gene_id":"SPBC649.05","synonyms":[{"name":"PomBase_original_PRO_term_name: spindle pole body-associated protein cut12 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cut12/Phos:1","type":"exact"},{"name":"UniProtKB:O59755, Thr-75/Thr-78, MOD:00047","type":"narrow"},{"name":"cut12/Phos(T75,T78)","type":"exact"}],"termid":"PR:000050399"}


id: GO:0032384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of cholesterol within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cholesterol transport","termid":"GO:0032375"},{"relation_name":"is_a","term_name":"negative regulation of intracellular sterol transport","termid":"GO:0032381"},{"relation_name":"is_a","term_name":"regulation of intracellular cholesterol transport","termid":"GO:0032383"},{"relation_name":"negatively_regulates","term_name":"intracellular cholesterol transport","termid":"GO:0032367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of intracellular cholesterol transport","synonyms":[{"name":"down regulation of intracellular cholesterol transport","type":"exact"},{"name":"down-regulation of intracellular cholesterol transport","type":"exact"},{"name":"downregulation of intracellular cholesterol transport","type":"exact"},{"name":"inhibition of intracellular cholesterol transport","type":"narrow"}],"termid":"GO:0032384"}


id: PBO:0053591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 618","termid":"PBO:0053591"}


id: PBO:0002203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatA N-acetyltransferase complex catalytic subunit Naa10 (predicted)","termid":"PBO:0002203"}


id: GO:0046177
data:
  {"annotated_genes":["SJAG_00633","SJAG_03852"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94249,107637],"is_not":false,"summary":null,"term":"GO:0046177"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-gluconate, the anion of D-gluconic acid, the aldonic acid derived from glucose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate catabolic process","termid":"GO:0016052"},{"relation_name":"is_a","term_name":"D-gluconate metabolic process","termid":"GO:0019521"},{"relation_name":"is_a","term_name":"aldonic acid catabolic process","termid":"GO:0046176"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00633":null,"SJAG_03852":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248","GO:0005975"],"is_obsolete":false,"name":"D-gluconate catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GLUCONSUPER-PWY"],"synonyms":[{"name":"D-gluconate breakdown","type":"exact"},{"name":"D-gluconate catabolism","type":"exact"},{"name":"D-gluconate degradation","type":"exact"}],"termid":"GO:0046177","terms_by_termid":{"GO:0046177":null}}


id: PBO:0113219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA-binding protein; binds to the 3'UTR of cell wall-related mRNAs and destabilizes these mRNAs during stress, acting antagonistically to Nab6p; links cell wall homeostasis to mitochondrial structure and function; binds specific categories of mRNAs, including those that contain upstream open reading frames (uORFs) and internal ribosome entry sites (IRES); interacts genetically with chromatin remodelers and splicing factors, linking chromatin state, splicing and as a result mRNA maturation","termid":"PBO:0113219"}


id: FYECO:0000407
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which benzamidine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ benzamidine","synonyms":[{"name":"benzamidine added","type":"exact"}],"termid":"FYECO:0000407"}


id: GO:0099534
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The directed change of presynaptic cytosolic free calcium ion concentration in the cytosol via the reversible binding of calcium ions to calcium-binding proteins in the cytosol thereby modulating the spatial and temporal dynamics of changes in presynaptic cytosolic calcium concentrations.","definition_xrefs":["PMID:26190970","PMID:24442513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion binding involved in regulation of cytosolic calcium ion concentration","termid":"GO:0099510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0046872"],"is_obsolete":false,"name":"calcium ion binding involved in regulation of presynaptic cytosolic calcium ion concentration","synonyms":[{"name":"calcium ion binding involved in regulation of presynaptic cytosolic calcium levels","type":"exact"},{"name":"presynaptic calcium ion buffering","type":"exact"},{"name":"regulation of presynaptic cytosolic calcium ion concentration by calcium ion buffering","type":"exact"}],"termid":"GO:0099534"}


id: GO:0007453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures derived from the clypeo-labral disc are generated and organized. This includes the transformation of a clypeo-labal imaginal disc from a monolayered epithelium in the larvae of holometabolous insects into recognizable adult structures including the labrum, anterior and posterior cibarial plates, fish trap bristles, epistomal sclerite and clypeus.","definition_xrefs":["GOC:bf","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc morphogenesis","termid":"GO:0007560"},{"relation_name":"part_of","term_name":"clypeo-labral disc development","termid":"GO:0035213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"clypeo-labral disc morphogenesis","synonyms":[{"name":"clypeo-labral disc metamorphosis","type":"exact"},{"name":"morphogenesis of structures derived from the clypeo-labral disc","type":"exact"}],"termid":"GO:0007453"}


id: FYPO:0008104
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cortical endoplasmic reticulum is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:36799444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to endoplasmic reticulum during vegetative growth","termid":"FYPO:0006378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to cortical endoplasmic reticulum","termid":"FYPO:0008104"}


id: PBO:0087024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L11B; expressed at half the level of Rpl11Ap; involved in ribosomal assembly; depletion causes degradation of 60S proteins and RNA; homologous to mammalian ribosomal protein L11 and bacterial L5; RPL11B has a paralog, RPL11A, that arose from the whole genome duplication","termid":"PBO:0087024"}


id: MOD:00594
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Natural or modified resiues with a mass of 113.047678 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at a resolution below 0.000001 Da","termid":"MOD:00569"},{"relation_name":"is_a","term_name":"residues isobaric at 113.0-113.1 Da","termid":"MOD:00624"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at 113.047678 Da","termid":"MOD:00594"}


id: PBO:0088751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC1 kinase family ubiquinone biosynthesis ATPase Coq8","termid":"PBO:0088751"}


id: PBO:0035979
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_dimethylation_at_centromere_inner_repeat_during_vegetative_growth","termid":"PBO:0035979"}


id: PBO:0064127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKHD1 like 1","termid":"PBO:0064127"}


id: FYPO:0004402
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to JM216 (also called satraplatin). Cells stop growing (and may die) at a concentration of JM216 that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0002683","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to JM216","synonyms":[{"name":"hypersensitive to JM216","type":"exact"},{"name":"sensitive to JM216 during mitotic cell cycle","type":"related"},{"name":"sensitive to JM216 during vegetative growth","type":"exact"},{"name":"sensitive to satraplatin","type":"exact"}],"termid":"FYPO:0004402"}


id: PBO:0067656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 833, pseudogene","termid":"PBO:0067656"}


id: GO:0080042
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP-glucose + H2O = AMP + glucose-1-phosphate.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ADP-sugar diphosphatase activity","termid":"GO:0019144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ADP-glucose pyrophosphohydrolase activity","termid":"GO:0080042"}


id: GO:0036506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Maintaining a protein in an unfolded, soluble state.","definition_xrefs":["PMID:21636303","GOC:BHF","GOC:nc","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein stability","termid":"GO:0031647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of unfolded protein","termid":"GO:0036506"}


id: GO:0045184
data:
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id: GO:0007101
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id: GO:0052614
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id: PBO:0063547
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id: GO:0033513
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id: GO:0015054
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id: GO:0032691
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id: GO:0000237
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id: FYPO:0000544
data:
  {"alleles_by_uniquename":{"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002033"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein modification does not occur. All modifications may be affected, or only modifications of a certain type, or on specific proteins, or even specific sites within specific proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"},{"relation_name":"is_a","term_name":"abolished protein modification","termid":"FYPO:0002497"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04551":null},"genotype_count":1,"genotypes_by_uniquename":{"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0002494","FYPO:0005447","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"abolished protein modification during vegetative growth","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_04551"],"single_locus_genotype_uniquenames":["Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abolished protein modification during mitotic cell cycle","type":"related"},{"name":"abolished protein/peptide modification during vegetative growth","type":"exact"},{"name":"absent protein/peptide modification during vegetative growth","type":"exact"},{"name":"protein modification abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0000544","terms_by_termid":{"FYPO:0002033":null}}


id: SO:0001369
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_carboxymethylaminomethyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_carboxymethylaminomethyluridine","secondary_identifiers":["RNAMOD:077"],"synonyms":[{"name":"5-carboxymethylaminomethyluridine","type":"exact"},{"name":"cmnm5U","type":"exact"},{"name":"five carboxymethylaminomethyluridine","type":"exact"}],"termid":"SO:0001369"}


id: PBO:0077974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon CGC) 2-1","termid":"PBO:0077974"}


id: PBO:0054198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1574","termid":"PBO:0054198"}


id: MOD:01078
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to S-(2-aminoethyl)-3-methylcysteine.","definition_xrefs":["Unimod:472#T","PubMed:12923550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(2-aminoethyl)-3-methylcysteine (Thr)","synonyms":[{"name":"2-amino-3-(2-aminoethyl)sulfanyl-3-methylbutanoic acid","type":"exact"},{"name":"AEC-MAEC","type":"related"},{"name":"S-aminoethyl-3-methylcysteine","type":"exact"},{"name":"beta-methylaminoethylcysteine","type":"related"}],"termid":"MOD:01078"}


id: PBO:0046351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 9","termid":"PBO:0046351"}


id: PBO:0087688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the NuA4 histone acetyltransferase complex; NuA4 acetylates the N-terminal tails of histones H4 and H2A","termid":"PBO:0087688"}


id: PBO:0082743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the RSC chromatin remodeling complex; found in close proximity to nucleosomal DNA; displaced from the surface of nucleosomal DNA after chromatin remodeling; acetylated (K25) by Gcn5p, altering replication stress tolerance; contains tandem bromodomains that recognize histone H3 acetylated on K14 (H3K14ac) by Gcn5p","termid":"PBO:0082743"}


id: FYPO:0009079
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of calcofluor and sodium dodecyl sulfate than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0002682"],"is_obsolete":false,"name":"resistance to calcofluor and sodium dodecyl sulfate","synonyms":[{"name":"resistance to calcofluor and SDS","type":"exact"},{"name":"resistance to calcofluor and SDS during vegetative growth","type":"exact"},{"name":"resistance to calcofluor and SDS in combination","type":"exact"},{"name":"resistance to calcofluor and sodium dodecyl sulfate during mitotic cell cycle","type":"related"},{"name":"resistance to calcofluor and sodium dodecyl sulfate during vegetative growth","type":"exact"},{"name":"resistance to calcofluor and sodium dodecyl sulfate in combination","type":"exact"},{"name":"resistant to calcofluor and SDS","type":"exact"},{"name":"resistant to calcofluor and sodium dodecyl sulfate","type":"exact"}],"termid":"FYPO:0009079"}


id: PBO:0071685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 17","termid":"PBO:0071685"}


id: PBO:0043614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COMM domain containing 4 pseudogene 2","termid":"PBO:0043614"}


id: PBO:0064689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 25","termid":"PBO:0064689"}


id: PBO:0074253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLCO1B3-SLCO1B7 readthrough","termid":"PBO:0074253"}


id: PBO:0054688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2097","termid":"PBO:0054688"}


id: GO:0002188
data:
  {"annotated_genes":["SJAG_02628","SJAG_01487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100121,101367],"is_not":false,"summary":null,"term":"GO:0002188"}]},"cv_name":"biological_process","definition":"A gene-specific translational control mechanism where the small ribosomal subunit remains attached to the mRNA following termination of translation, then resumes scanning on the same mRNA molecule and initiates again at a downstream start site. Reinitiation depends on de novo recruitment of the ternary complex that is required to recognize the next AUG codon.","definition_xrefs":["PMID:18765792","PMID:18056426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic translational initiation","termid":"GO:0002183"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01487":null,"SJAG_02628":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0002181"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0002181","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"translation reinitiation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0002188","terms_by_termid":{"GO:0002188":null}}


id: GO:0072583
data:
  {"annotated_genes":["SJAG_00104","SJAG_05198","SJAG_00032","SJAG_03643","SJAG_05296","SJAG_02282","SJAG_03404","SJAG_03146","SJAG_04052","SJAG_00803","SJAG_04517","SJAG_01748","SJAG_05011","SJAG_04479","SJAG_00800","SJAG_04050","SJAG_04465","SJAG_02805","SJAG_00649","SJAG_01167","SJAG_02789","SJAG_01686","SJAG_03596"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86360,87591,88254,88632,90950,92335,92354,98802,101761,102067,104112,104389,106747,107656,107718,107737,108372,108971,113595,114934],"is_not":false,"summary":null,"term":"GO:0072583"},{"annotations":[107078,114917,107729],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000369"}]},"cv_name":"biological_process","definition":"An endocytosis process that begins when material is taken up into clathrin-coated pits, which then pinch off to form clathrin-coated endocytic vesicles.","definition_xrefs":["GOC:mah","PMID:18498251","GOC:BHF","PMID:9234965","PMID:8970738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor-mediated endocytosis","termid":"GO:0006898"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00032":null,"SJAG_00104":null,"SJAG_00649":null,"SJAG_00800":null,"SJAG_00803":null,"SJAG_01167":null,"SJAG_01686":null,"SJAG_01748":null,"SJAG_02282":null,"SJAG_02789":null,"SJAG_02805":null,"SJAG_03146":null,"SJAG_03404":null,"SJAG_03596":null,"SJAG_03643":null,"SJAG_04050":null,"SJAG_04052":null,"SJAG_04465":null,"SJAG_04479":null,"SJAG_04517":null,"SJAG_05011":null,"SJAG_05198":null,"SJAG_05296":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192","GO:0051179"],"is_obsolete":false,"name":"clathrin-dependent endocytosis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CME","type":"exact"},{"name":"clathrin coated pit-dependent endocytosis","type":"exact"},{"name":"clathrin-mediated endocytosis","type":"exact"}],"termid":"GO:0072583","terms_by_termid":{"GO:0072583":null,"GO:2000369":null}}


id: PR:O13632
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dual specificity protein phosphatase 12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02852","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine-protein phosphatase yvh1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17A3.06","secondary_identifiers":["UniProtKB:O13632"],"synonyms":[{"name":"PTPase yvh1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-DUSP12","type":"exact"}],"termid":"PR:O13632"}


id: GO:0031353
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plastid inner membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of plastid inner membrane (obsolete GO:0031353)","synonyms":[{"name":"integral to plastid inner membrane","type":"narrow"}],"termid":"GO:0031353"}


id: MOD:00383
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-glutamic acid residue and a glycine residue to form 2-imino-glutamic acid 5-imidazolinone glycine.","definition_xrefs":["RESID:AA0378","PubMed:11682051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-imidazolinone ring crosslinked residues (Gly)","termid":"MOD:01882"},{"relation_name":"is_a","term_name":"crosslinked L-glutamic acid residue","termid":"MOD:02045"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-imino-glutamic acid 5-imidazolinone glycine","synonyms":[{"name":"2,N-didehydroglutamyl-5-imidazolinone glycine","type":"exact"},{"name":"2-(3-carboxy-1-iminopropyl)-1-carboxymethyl-1-imidazolin-5-one","type":"exact"},{"name":"2-imino-glutamic acid 5-imidazolinone glycine","type":"exact"},{"name":"2-imino-glutamyl-5-imidazolinone glycine","type":"exact"},{"name":"4-[1-(carboxymethyl)-5-oxo-4,5-dihydro-1H-imidazol-2-yl]-4-iminobutanoic acid","type":"exact"},{"name":"CROSSLNK 2-iminomethyl-5-imidazolinone (Glu-Gly)","type":"exact"},{"name":"[2-(3-carboxy-1-iminopropyl)-5-oxo-4,5-dihydro-imidazol-1-yl]-acetic acid","type":"exact"},{"name":"para-hydroxybenzylidene-imidazolidinone chromophore","type":"exact"}],"termid":"MOD:00383"}


id: PBO:0072313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S25 pseudogene 10","termid":"PBO:0072313"}


id: SO:0002134
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A constant (C) gene, a gene that codes the constant region of a T-cell receptor chain.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html","IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T_cell_receptor_gene","termid":"SO:0002133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TR_C_Gene","synonyms":[{"name":"T_cell_receptor_C_gene","type":"exact"}],"termid":"SO:0002134"}


id: PBO:0059530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded termination associated sequence","termid":"PBO:0059530"}


id: GO:0047712
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Cypridina luciferin + O2 = oxidized Cypridina luciferin + CO2 + light.","definition_xrefs":["MetaCyc:CYPRIDINA-LUCIFERIN-2-MONOOXYGENASE-RXN","EC:1.13.12.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"},{"relation_name":"is_a","term_name":"luciferin monooxygenase activity","termid":"GO:0045289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"Cypridina-luciferin 2-monooxygenase activity","secondary_identifiers":["RHEA:22760"],"synonyms":[{"name":"Cypridina luciferase activity","type":"related"},{"name":"Cypridina-luciferin:oxygen 2-oxidoreductase (decarboxylating)","type":"related"},{"name":"Cypridina-type luciferase activity","type":"related"},{"name":"luciferase (Cypridina luciferin)","type":"related"},{"name":"luciferase activity","type":"broad"}],"termid":"GO:0047712"}


id: SO:0001123
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of six or seven consecutive residues that contains two H-bonds.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"schellmann_loop","secondary_identifiers":["BS:00226"],"synonyms":[{"name":"paperclip","type":"related"},{"name":"paperclip loop","type":"related"},{"name":"schellmann loop","type":"exact"}],"termid":"SO:0001123"}


id: GO:0046902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the passage or uptake of molecules by the mitochondrial membrane.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial membrane organization","termid":"GO:0007006"},{"relation_name":"is_a","term_name":"regulation of membrane permeability","termid":"GO:0090559"},{"relation_name":"part_of","term_name":"mitochondrial transport","termid":"GO:0006839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0007005","GO:0006810","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"regulation of mitochondrial membrane permeability","synonyms":[{"name":"regulation of mitochondrial envelope permeability","type":"related"},{"name":"regulation of transport across mitochondrial membrane","type":"exact"}],"termid":"GO:0046902"}


id: PBO:0053692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 887","termid":"PBO:0053692"}


id: PBO:0062872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU deubiquitinase 7A","termid":"PBO:0062872"}


id: PBO:0068395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 214","termid":"PBO:0068395"}


id: PBO:0044737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 18 pseudogene 5","termid":"PBO:0044737"}


id: GO:0030613
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a phosphorus- or arsenic-containing group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["EC:1.20.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on phosphorus or arsenic in donors","synonyms":[{"name":"oxidoreductase activity, acting on phosphorus or arsenic in donors, with other acceptors","type":"narrow"}],"termid":"GO:0030613"}


id: GO:0033377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is maintained in a secretory granule in a T cell and prevented from moving elsewhere.","definition_xrefs":["GOC:dph","GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein location in cell","termid":"GO:0032507"},{"relation_name":"part_of","term_name":"protein localization to T cell secretory granule","termid":"GO:0033374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of protein location in T cell secretory granule","synonyms":[{"name":"maintenance of protein localization in T cell secretory granule","type":"related"},{"name":"maintenance of protein localization in T lymphocyte secretory granule","type":"exact"},{"name":"maintenance of protein localization in T-cell secretory granule","type":"exact"},{"name":"maintenance of protein localization in T-lymphocyte secretory granule","type":"exact"}],"termid":"GO:0033377"}


id: GO:0099128
data:
  {"annotated_genes":["SJAG_01238","SJAG_00532","SJAG_04397","SJAG_00186","SJAG_01063","SJAG_03862","SJAG_00894"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89006,89234,94324,99167,102925,105731,109938],"is_not":false,"summary":null,"term":"GO:0099128"}]},"cv_name":"cellular_component","definition":"A protein complex capable of forming 2Fe-2S clusters in mitochondria. In humans it consists of ISCU, NFS1, LYRM4, NDUFAB1 and FXN.","definition_xrefs":["PMID:34660592","PMID:31101807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"is_a","term_name":"L-cysteine desulfurase complex","termid":"GO:1990221"},{"relation_name":"is_a","term_name":"iron-sulfur cluster assembly complex","termid":"GO:1990229"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00186":null,"SJAG_00532":null,"SJAG_00894":null,"SJAG_01063":null,"SJAG_01238":null,"SJAG_03862":null,"SJAG_04397":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005739","GO:0005575","GO:0032991","GO:0005829","GO:0005737"],"is_obsolete":false,"name":"mitochondrial [2Fe-2S] assembly complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial ISCU complex","type":"exact"},{"name":"mitochondrial iron-sulfur cluster assembly complex","type":"related"}],"termid":"GO:0099128","terms_by_termid":{"GO:0099128":null}}


id: PBO:0072837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP30 binding protein","termid":"PBO:0072837"}


id: PBO:0070700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 4","termid":"PBO:0070700"}


id: GO:0004198
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type endopeptidase activity","termid":"GO:0004197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0140096","GO:0003674","GO:0008233"],"is_obsolete":false,"name":"calcium-dependent cysteine-type endopeptidase activity","secondary_identifiers":["Reactome:R-HSA-8848658","Reactome:R-HSA-8863012"],"synonyms":[{"name":"calpain activity","type":"narrow"}],"termid":"GO:0004198"}


id: PBO:0001877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex non-SMC subunit 2","termid":"PBO:0001877"}


id: GO:0016703
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and one oxygen atom is incorporated into a donor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen","termid":"GO:0016701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","secondary_identifiers":["EC:1.13.12.-"],"termid":"GO:0016703"}


id: PBO:0057809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3130-2","termid":"PBO:0057809"}


id: GO:0098672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont inhibits or disrupts the CRISPR-cas system of its host. Bacteria and archaea use CRISPR-Cas adaptive immune systems to defend themselves from infection by bacteriophages (phages), and phages have various mechanisms to counter the CRISPR-cas system.","definition_xrefs":["PMID:23446421","PMID:23242138","PMID:26416740","PMID:28749735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host innate immune response","termid":"GO:0052170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host CRISPR-cas system","secondary_identifiers":["VZ:3962"],"synonyms":[{"name":"CRISPR-cas system evasion by virus","type":"exact"},{"name":"anti-CRISPR","type":"broad"},{"name":"evasion by virus of CRISPR-cas system","type":"related"},{"name":"inhibition of host CRISPR-cas system by virus","type":"related"},{"name":"suppression of host CRISPR-cas system","type":"exact"}],"termid":"GO:0098672"}


id: GO:1901454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to toluene.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to toluene","termid":"GO:1901424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to toluene","termid":"GO:1901454"}


id: GO:1900018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any phosphorylation of RNA polymerase II C-terminal domain serine 5 residues that is involved in recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex.","definition_xrefs":["GOC:rb","GOC:TermGenie","PMID:19666497","PMID:10594013"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphorylation of RNA polymerase II C-terminal domain serine 5 residues involved in recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex (obsolete GO:1900018)","termid":"GO:1900018"}


id: PBO:0018131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine deaminase Gud1 (predicted)","termid":"PBO:0018131"}


id: GO:1902188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of viral release from host cell.","definition_xrefs":["PMID:18305167","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of viral release from host cell (obsolete GO:1902188)","synonyms":[{"name":"activation of release of virus from host","type":"exact"},{"name":"activation of viral exit","type":"exact"},{"name":"activation of viral release","type":"exact"},{"name":"activation of viral release from host cell","type":"narrow"},{"name":"activation of viral shedding","type":"exact"},{"name":"positive regulation of release of virus from host","type":"exact"},{"name":"positive regulation of viral exit","type":"exact"},{"name":"positive regulation of viral release","type":"exact"},{"name":"positive regulation of viral shedding","type":"exact"},{"name":"up regulation of release of virus from host","type":"exact"},{"name":"up regulation of viral exit","type":"exact"},{"name":"up regulation of viral release","type":"exact"},{"name":"up regulation of viral release from host cell","type":"exact"},{"name":"up regulation of viral shedding","type":"exact"},{"name":"up-regulation of release of virus from host","type":"exact"},{"name":"up-regulation of viral exit","type":"exact"},{"name":"up-regulation of viral release","type":"exact"},{"name":"up-regulation of viral release from host cell","type":"exact"},{"name":"up-regulation of viral shedding","type":"exact"},{"name":"upregulation of release of virus from host","type":"exact"},{"name":"upregulation of viral exit","type":"exact"},{"name":"upregulation of viral release","type":"exact"},{"name":"upregulation of viral release from host cell","type":"exact"},{"name":"upregulation of viral shedding","type":"exact"}],"termid":"GO:1902188"}


id: GO:0036504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of two lipid bilayers that surround the Golgi apparatus to form a single Golgi membrane.","definition_xrefs":["GOC:PARL","PMID:12473691","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane fusion","termid":"GO:0090174"},{"relation_name":"part_of","term_name":"Golgi reassembly","termid":"GO:0090168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"Golgi membrane fusion","synonyms":[{"name":"Golgi apparatus membrane fusion","type":"exact"},{"name":"membrane fusion involved in Golgi reassembly","type":"exact"},{"name":"post-mitotic fusion of Golgi membranes","type":"exact"}],"termid":"GO:0036504"}


id: PR:Q9P6J6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A periplasmic beta-glucosidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02337","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-glucosidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1683.04","secondary_identifiers":["UniProtKB:Q9P6J6"],"synonyms":[{"name":"Spom972h-bglX","type":"exact"},{"name":"Cellobiase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Gentiobiase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"beta-D-glucoside glucohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6J6"}


id: GO:0018795
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxy-2-methyl-1,3-dicarbonate + H+ = CO2 + L-lactate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxy-2-methyl-1,3-dicarbonate decarboxylase activity (obsolete GO:0018795)","termid":"GO:0018795"}


id: PBO:0028420
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_ubiquinone_binding","termid":"PBO:0028420"}


id: PBO:0050124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 34","termid":"PBO:0050124"}


id: PBO:0029783
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population_with_abnormal_cell_morphology_(obsolete_FYPO:0002454)","termid":"PBO:0029783"}


id: _global:independent_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"Identifies an entity that was shown not to be required for the ontology term to apply to the annotated gene product.","definition_xrefs":["GOA:rph"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"independent_of","secondary_identifiers":["_global:not_dependent_on","GOREL:0000013"],"synonyms":[{"name":"independent_of","type":"exact"},{"name":"not dependent on","type":"exact"}],"termid":"_global:independent_of"}


id: PBO:0112852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coilin, Mug174","termid":"PBO:0112852"}


id: GO:0098943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of neurotransmitter receptor from the postsynaptic endosome in tranpsort vesicles to the lysosome for degradation.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"is_a","term_name":"endosome to lysosome transport","termid":"GO:0008333"},{"relation_name":"is_a","term_name":"protein localization to lysosome","termid":"GO:0061462"},{"relation_name":"is_a","term_name":"establishment of protein localization to vacuole","termid":"GO:0072666"},{"relation_name":"is_a","term_name":"neurotransmitter receptor transport","termid":"GO:0099637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"neurotransmitter receptor transport, postsynaptic endosome to lysosome","synonyms":[{"name":"postsynaptic neurotransmitter receptor endosomal trafficking","type":"broad"}],"termid":"GO:0098943"}


id: FYPO:0006999
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is normally dynamically localized to a specific place in the cell shows a normal (i.e. indistinguishable from wild type) temporal pattern of localization. For example, a protein may move to or from the location more or less frequently than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000138","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal dynamic protein localization pattern","synonyms":[{"name":"normal dynamic pattern of protein localization","type":"exact"},{"name":"normal dynamic protein localisation pattern","type":"exact"},{"name":"normal temporal protein localization pattern","type":"related"}],"termid":"FYPO:0006999"}


id: PBO:0090449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [acyl-carrier protein] S-malonyltransferase Mct1","termid":"PBO:0090449"}


id: PBO:0040293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP2A1 antisense RNA 1","termid":"PBO:0040293"}


id: PBO:0113495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation elongation factor 3; contains two ABC cassettes; binds and hydrolyzes ATP; interacts with mRNA independently of translation; involved in frameshifting at stalled ribosomes; YEF3 has a paralog, HEF3, that arose from the whole genome duplication","termid":"PBO:0113495"}


id: FYPO:0008231
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of lactate dehydrogenase activity is increased.","definition_xrefs":["PMID:37787465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"increased lactate dehydrogenase activity","termid":"FYPO:0008231"}


id: GO:0140893
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(in) + amino acid(out) + Na+(out) = H+(out) + amino acid(in) + Na+(in).","definition_xrefs":["PMID:11698233","PMID:34704597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium:proton antiporter activity","termid":"GO:0015385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"neutral amino acid, sodium:proton antiporter activity","secondary_identifiers":["TC:2.A.18.6.8"],"synonyms":[{"name":"amino acid-coupled Na+/H+ exchanger activity","type":"exact"}],"termid":"GO:0140893"}


id: _global:causally_upstream_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"p is causally upstream of q iff p is causally related to q, the end of p precedes the end of q, and p is not an occurrent part of q.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of_or_within","termid":"_global:causally_upstream_of_or_within"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"precedes","termid":"_global:precedes"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_upstream_of","secondary_identifiers":["RO:0002411"],"termid":"_global:causally_upstream_of"}


id: GO:0034589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of hydroxyproline into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:14502423","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"modified amino acid transport","termid":"GO:0072337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"hydroxyproline transport","synonyms":[{"name":"4-hydroxyproline transport","type":"exact"},{"name":"L-hydroxyproline transport","type":"narrow"}],"termid":"GO:0034589"}


id: PBO:0070886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 18","termid":"PBO:0070886"}


id: FYPO:0008183
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H3-S10 phosphorylation is decreased.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone phosphorylation during vegetative growth","termid":"FYPO:0002591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0001320"],"is_obsolete":false,"name":"decreased histone H3-S10 phosphorylation during vegetative growth","termid":"FYPO:0008183"}


id: PBO:0001777
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by P. carnii Brl1","termid":"PBO:0001777"}


id: GO:0060079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that leads to a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential.","definition_xrefs":["GOC:ef","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of postsynaptic membrane potential","termid":"GO:0060078"},{"relation_name":"part_of","term_name":"chemical synaptic transmission, postsynaptic","termid":"GO:0099565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"excitatory postsynaptic potential","synonyms":[{"name":"regulation of EPSP","type":"related"},{"name":"regulation of excitatory post-synaptic membrane potential","type":"exact"}],"termid":"GO:0060079"}


id: PBO:0030988
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nucleosome_positioning_in_euchromatin","termid":"PBO:0030988"}


id: PBO:0066816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 115","termid":"PBO:0066816"}


id: PR:Q09870
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA 3'-terminal phosphate cyclase-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00128","PANTHER:PTHR11096:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA 3'-terminal phosphate cyclase-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.06c","secondary_identifiers":["UniProtKB:Q09870"],"synonyms":[{"name":"Spom972h-RCL1","type":"exact"}],"termid":"PR:Q09870"}


id: PBO:0054919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2333","termid":"PBO:0054919"}


id: PR:Q1MTN9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pcf1 gene.","definition_xrefs":["UniProtKB:Q1MTN9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin assembly factor 1 subunit rlf2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A10.03c","synonyms":[{"name":"Spom972h-pcf1","type":"exact"}],"termid":"PR:Q1MTN9"}


id: PBO:0048354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 65","termid":"PBO:0048354"}


id: GO:0070998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a gravitational stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of gravity","termid":"GO:0070998"}


id: GO:0021655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of rhombomere 2 is generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:curators","GO_REF:0000021","GOC:dph","GOC:cls","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere morphogenesis","termid":"GO:0021593"},{"relation_name":"part_of","term_name":"rhombomere 2 development","termid":"GO:0021568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 2 morphogenesis","termid":"GO:0021655"}


id: GO:0060125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases or stops the frequency, rate or extent of the regulated release of growth hormone from a cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of growth hormone secretion","termid":"GO:0060123"},{"relation_name":"is_a","term_name":"negative regulation of peptide hormone secretion","termid":"GO:0090278"},{"relation_name":"negatively_regulates","term_name":"growth hormone secretion","termid":"GO:0030252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of growth hormone secretion","termid":"GO:0060125"}


id: PBO:0054830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2243","termid":"PBO:0054830"}


id: SO:0001536
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant whereby the effect is evaluated with respect to a reference.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_variant","termid":"SO:0001060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functional_effect_variant","synonyms":[{"name":"functional effect variant","type":"exact"},{"name":"functional variant","type":"exact"}],"termid":"SO:0001536"}


id: GO:0019948
data:
  {"annotated_genes":["SJAG_02082","SJAG_00604","SJAG_05032"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92270,93821,100533],"is_not":false,"summary":null,"term":"GO:0019948"}]},"cv_name":"molecular_function","definition":"Catalysis of the activation of the proteolytically processed small ubiquitin-related modifier SUMO, through the formation of an ATP-dependent high-energy thiolester bond.","definition_xrefs":["PMID:10187858","GOC:rn","PMID:11265250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like modifier activating enzyme activity","termid":"GO:0008641"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00604":null,"SJAG_02082":null,"SJAG_05032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"SUMO activating enzyme activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2990833","GO:0017115","Reactome:R-HSA-2993781","Reactome:R-HSA-2993784"],"synonyms":[{"name":"SMT3 activating enzyme","type":"exact"},{"name":"SUMO E1 activator enzyme","type":"exact"}],"termid":"GO:0019948","terms_by_termid":{"GO:0019948":null}}


id: PBO:0042737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENPN antisense RNA 1","termid":"PBO:0042737"}


id: FYPO:0002131
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype that affects an interaction between a protein and RNA. One of the relevant gene product may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"protein-RNA interaction phenotype","synonyms":[{"name":"RNA binding phenotype","type":"exact"},{"name":"RNA-protein interaction phenotype","type":"exact"},{"name":"fission yeast RNA binding phenotype","type":"exact"},{"name":"fission yeast protein-RNA interaction phenotype","type":"exact"}],"termid":"FYPO:0002131"}


id: PBO:0075360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOX1 overlapping transcript","termid":"PBO:0075360"}


id: GO:0005150
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Type I interleukin-1 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-1 receptor binding","termid":"GO:0005149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"interleukin-1, type I receptor binding","synonyms":[{"name":"IL-1 type I","type":"narrow"},{"name":"interleukin-1, type I receptor ligand","type":"narrow"}],"termid":"GO:0005150"}


id: GO:0023069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is conveyed via the xylem.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transmission via xylem (obsolete GO:0023069)","synonyms":[{"name":"signal transmission via xylem","type":"exact"}],"termid":"GO:0023069"}


id: FYPO:0005003
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the composition of a protein complex differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein complex composition","synonyms":[{"name":"abnormal protein complex stoichiometry","type":"exact"},{"name":"abnormal protein-containing complex composition","type":"exact"}],"termid":"FYPO:0005003"}


id: GO:0033474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an indole-3-acetic acid conjugate, a form of indoleacetic acid covalently bound to another molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin biosynthetic process","termid":"GO:0009851"},{"relation_name":"is_a","term_name":"indoleacetic acid conjugate metabolic process","termid":"GO:0033473"},{"relation_name":"is_a","term_name":"indole-containing compound biosynthetic process","termid":"GO:0042435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"indoleacetic acid conjugate biosynthetic process","synonyms":[{"name":"IAA conjugate biosynthetic process","type":"exact"},{"name":"indole acetic acid conjugate biosynthesis","type":"exact"},{"name":"indole acetic acid conjugate biosynthetic process","type":"exact"},{"name":"indoleacetic acid conjugate anabolism","type":"exact"},{"name":"indoleacetic acid conjugate biosynthesis","type":"exact"},{"name":"indoleacetic acid conjugate formation","type":"exact"},{"name":"indoleacetic acid conjugate synthesis","type":"exact"}],"termid":"GO:0033474"}


id: PBO:0087215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine synthetase; catalyzes transfer of the adenosyl group of ATP to the sulfur atom of methionine; SAM1 has a paralog, SAM2, that arose from the whole genome duplication","termid":"PBO:0087215"}


id: PBO:0074654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 41B","termid":"PBO:0074654"}


id: PBO:0085708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in silencing at mating-type loci HML and HMR; recruitment to silent chromatin requires interactions with Orc1p and with Sir4p, through a common Sir1p domain; binds to centromeric chromatin","termid":"PBO:0085708"}


id: PBO:0063133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0063133"}


id: PBO:0030099
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_ornithine_level","termid":"PBO:0030099"}


id: GO:0075520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a virus, or part of a virus, within the host cell cytoplasm via the host's actin filaments. Actin-dependent transport is induced by viral proteins that interact with actin and/or host cell motor proteins like myosins or that promotes actin polymerization/depolymerization reactions.","definition_xrefs":["VZ:991","UniProtKB-KW:KW-1178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport of virus","termid":"GO:0075733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"actin-dependent intracellular transport of virus","synonyms":[{"name":"actin-dependent intracellular transport of viral material","type":"exact"}],"termid":"GO:0075520"}


id: PBO:0091596
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycerate PhosphoMutase","termid":"PBO:0091596"}


id: PBO:0050644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hematopoietic SH2 domain containing","termid":"PBO:0050644"}


id: PBO:0079297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"titin","termid":"PBO:0079297"}


id: PBO:0054676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2083","termid":"PBO:0054676"}


id: GO:0019555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glutamate into other compounds, including ornithine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate catabolic process","termid":"GO:0006538"},{"relation_name":"is_a","term_name":"ornithine metabolic process","termid":"GO:0006591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"glutamate catabolic process to ornithine","secondary_identifiers":["MetaCyc:GLUTORN-PWY"],"synonyms":[{"name":"glutamate breakdown to ornithine","type":"exact"},{"name":"glutamate degradation to ornithine","type":"exact"}],"termid":"GO:0019555"}


id: PBO:0087620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Cop9 signalosome; which is required for deneddylation, or removal of the ubiquitin-like protein Rub1p from Cdc53p (cullin); involved in adaptation to pheromone signaling; functional equivalent of canonical Csn6 subunit of the COP9 signalosome","termid":"PBO:0087620"}


id: GO:1902661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glucose mediated signaling pathway.","definition_xrefs":["GO_REF:0000058","GOC:di","PMID:24277933","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of glucose mediated signaling pathway","termid":"GO:1902659"},{"relation_name":"positively_regulates","term_name":"glucose mediated signaling pathway","termid":"GO:0010255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of glucose mediated signaling pathway","synonyms":[{"name":"activation of glucose mediated signaling pathway","type":"narrow"},{"name":"activation of glucose mediated signalling","type":"narrow"},{"name":"positive regulation of glucose mediated signalling","type":"exact"},{"name":"up regulation of glucose mediated signaling pathway","type":"exact"},{"name":"up regulation of glucose mediated signalling","type":"exact"},{"name":"up-regulation of glucose mediated signaling pathway","type":"exact"},{"name":"up-regulation of glucose mediated signalling","type":"exact"},{"name":"upregulation of glucose mediated signaling pathway","type":"exact"},{"name":"upregulation of glucose mediated signalling","type":"exact"}],"termid":"GO:1902661"}


id: PBO:0057460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 579","termid":"PBO:0057460"}


id: PBO:0079810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glycosyltransferase family 3 member A2","termid":"PBO:0079810"}


id: PBO:0044768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 50 pseudogene 2","termid":"PBO:0044768"}


id: PBO:0042598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMT1A duplicated region transcript 13","termid":"PBO:0042598"}


id: GO:0006034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving cuticle chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues, found in cuticles.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cuticle chitin metabolic process (obsolete GO:0006034)","synonyms":[{"name":"cuticle chitin metabolism","type":"exact"}],"termid":"GO:0006034"}


id: PBO:0003799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAVE complex subunit Rav2","termid":"PBO:0003799"}


id: GO:0042034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a C-terminal peptidyl-lysine to form peptidyl-L-lysine methyl ester.","definition_xrefs":["RESID:AA0318"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-lysine methyl ester biosynthetic process from peptidyl-lysine (obsolete GO:0042034)","synonyms":[{"name":"peptidyl-lysine esterification","type":"exact"}],"termid":"GO:0042034"}


id: PBO:0069699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 978, pseudogene","termid":"PBO:0069699"}


id: PBO:0110195
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_approval_in_progress_timestamp","termid":"PBO:0110195"}


id: GO:1903477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any actin filament bundle assembly that is involved in mitotic actomyosin contractile ring assembly.","definition_xrefs":["GOC:vw","GO_REF:0000060","GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actomyosin contractile ring actin filament bundle assembly","termid":"GO:0071519"},{"relation_name":"is_a","term_name":"mitotic actomyosin contractile ring assembly actin filament organization","termid":"GO:1903479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0030036","GO:0000281","GO:0044085","GO:0007049","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"mitotic contractile ring actin filament bundle assembly","synonyms":[{"name":"actin filament bundle assembly involved in mitotic actomyosin contractile ring assembly","type":"exact"}],"termid":"GO:1903477"}


id: GO:0098003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a virus tail.","definition_xrefs":["VZ:3955","GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"virion assembly","termid":"GO:0019068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral tail assembly","synonyms":[{"name":"bacteriophage tail assembly","type":"narrow"},{"name":"virus tail assembly","type":"exact"}],"termid":"GO:0098003"}


id: GO:0008872
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucarate = 5-dehydro-4-deoxy-D-glucarate + H2O.","definition_xrefs":["EC:4.2.1.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"glucarate dehydratase activity","secondary_identifiers":["RHEA:14573","MetaCyc:GLUCARDEHYDRA-RXN"],"synonyms":[{"name":"D-glucarate dehydratase activity","type":"related"},{"name":"D-glucarate hydro-lyase (5-dehydro-4-deoxy-D-glucarate-forming)","type":"related"},{"name":"D-glucarate hydro-lyase activity","type":"related"}],"termid":"GO:0008872"}


id: PBO:0083437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YOL036W","termid":"PBO:0083437"}


id: GO:0072036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where a mesenchymal cell establishes apical/basolateral polarity,forms intercellular adhesive junctions, synthesizes basement membrane components and becomes an epithelial cell that will contribute to the shaping of the renal vesicle.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation involved in kidney development","termid":"GO:0035850"},{"relation_name":"is_a","term_name":"mesenchymal to epithelial transition","termid":"GO:0060231"},{"relation_name":"part_of","term_name":"renal vesicle formation","termid":"GO:0072033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal to epithelial transition involved in renal vesicle formation","termid":"GO:0072036"}


id: GO:0090143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nucleoid. The nucleoid is the region of a bacterial cell, virion, mitochondrion or chloroplast to which the DNA is confined.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nucleoid organization","synonyms":[{"name":"nucleoid organisation","type":"exact"}],"termid":"GO:0090143"}


id: GO:0021735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the dentate nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:cls","GOC:jid","GO_REF:0000021","GOC:curators","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"cerebellum development","termid":"GO:0021549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dentate nucleus development","termid":"GO:0021735"}


id: GO:0002711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of T cell mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lymphocyte mediated immunity","termid":"GO:0002708"},{"relation_name":"is_a","term_name":"regulation of T cell mediated immunity","termid":"GO:0002709"},{"relation_name":"is_a","term_name":"positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002824"},{"relation_name":"positively_regulates","term_name":"T cell mediated immunity","termid":"GO:0002456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell mediated immunity","synonyms":[{"name":"activation of T cell mediated immunity","type":"narrow"},{"name":"positive regulation of T lymphocyte mediated immunity","type":"exact"},{"name":"positive regulation of T-cell mediated immunity","type":"exact"},{"name":"positive regulation of T-lymphocyte mediated immunity","type":"exact"},{"name":"stimulation of T cell mediated immunity","type":"narrow"},{"name":"up regulation of T cell mediated immunity","type":"exact"},{"name":"up-regulation of T cell mediated immunity","type":"exact"},{"name":"upregulation of T cell mediated immunity","type":"exact"}],"termid":"GO:0002711"}


id: SO:0001760
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pseudogene that arose from a means other than retrotransposition. A pseudogene created via genomic duplication of a functional protein-coding parent gene followed by accumulation of deleterious mutations.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogene","termid":"SO:0000336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_processed_pseudogene","synonyms":[{"name":"INSDC_feature:gene","type":"broad"},{"name":"INSDC_qualifier:unprocessed","type":"exact"},{"name":"non processed pseudogene","type":"related"},{"name":"unprocessed pseudogene","type":"exact"},{"name":"unprocessed_pseudogene","type":"exact"}],"termid":"SO:0001760"}


id: PBO:0017791
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Heredopathia Atactica Polyneuritiformis","termid":"PBO:0017791"}


id: GO:0030559
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Specifies the site of pseudouridylation in an rRNA molecule by base pairing with a short sequence around the target residue.","definition_xrefs":["PMID:12457565","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA modification guide activity","termid":"GO:0030556"},{"relation_name":"is_a","term_name":"RNA pseudouridylation guide activity","termid":"GO:0030558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"rRNA pseudouridylation guide activity","termid":"GO:0030559"}


id: PBO:0054495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1895","termid":"PBO:0054495"}


id: GO:0052751
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-mannose + H2O = GMP + mannose-1-phosphate.","definition_xrefs":["PMID:16766526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"GDP-mannose hydrolase activity","synonyms":[{"name":"GDP-mannose pyrophosphatase activity","type":"related"}],"termid":"GO:0052751"}


id: PBO:0067693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal N5","termid":"PBO:0067693"}


id: PBO:0072962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretogranin III","termid":"PBO:0072962"}


id: PR:Q03319
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase DHX33 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00324","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase prh1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2G11.11c","secondary_identifiers":["UniProtKB:Q03319"],"synonyms":[{"name":"Spom972h-DHX33","type":"exact"}],"termid":"PR:Q03319"}


id: PBO:0055630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3069","termid":"PBO:0055630"}


id: FYPO:0001594
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of asparagine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased amino acid import during vegetative growth","termid":"FYPO:0001360"},{"relation_name":"is_a","term_name":"abnormal asparagine import","termid":"FYPO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased asparagine import","synonyms":[{"name":"decreased L-asparagine import","type":"exact"},{"name":"decreased L-asparagine import across plasma membrane","type":"exact"},{"name":"decreased asparagine import during mitotic cell cycle","type":"related"},{"name":"decreased asparagine import during vegetative growth","type":"exact"},{"name":"decreased asparagine import into cell","type":"exact"},{"name":"decreased asparagine uptake","type":"exact"},{"name":"reduced asparagine import","type":"exact"}],"termid":"FYPO:0001594"}


id: GO:0007143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle process by which the cell nucleus divides as part of a meiotic cell cycle in the female germline.","definition_xrefs":["GOC:ems","GOC:dph","GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic nuclear division","termid":"GO:0140013"},{"relation_name":"part_of","term_name":"female gamete generation","termid":"GO:0007292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0140013","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"female meiotic nuclear division","synonyms":[{"name":"female meiosis","type":"broad"},{"name":"female meiotic division","type":"broad"}],"termid":"GO:0007143"}


id: PBO:0083671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic reticulum transmembrane protein; may interact with ribosomes, based on co-purification experiments; homolog of human BAP31 protein; YET1 has a paralog, YET2, that arose from the whole genome duplication","termid":"PBO:0083671"}


id: PBO:0005190
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"longest ORF with methionine is 66 amino acids","termid":"PBO:0005190"}


id: FYPO:0006904
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which a mitotic cell size control checkpoint is normal (i.e. indistinguishable from wild type). A mitotic cell size control checkpoint normally prevents cell cycle progression until the cell reaches a certain size.","definition_xrefs":["PomBase:mah","GO:0031567"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle checkpoint","termid":"FYPO:0001703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000631","FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal mitotic cell size control checkpoint","synonyms":[{"name":"normal cell size control checkpoint during mitotic cell cycle","type":"exact"},{"name":"normal mitotic cell size control checkpoint activation","type":"exact"},{"name":"normal mitotic cell size control checkpoint during vegetative growth","type":"exact"}],"termid":"FYPO:0006904"}


id: GO:0000831
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 1D-myo-inositol hexakisphosphate = ADP + 6-diphospho-1D-myo-inositol (1,2,3,4,5)pentakisphosphate.","definition_xrefs":["GOC:elh","PMID:16429326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol hexakisphosphate kinase activity","termid":"GO:0000828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"inositol hexakisphosphate 6-kinase activity","termid":"GO:0000831"}


id: PBO:0068968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 212, pseudogene","termid":"PBO:0068968"}


id: PBO:0005348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NuA4 histone acetyltransferase complex subunit Vid21","termid":"PBO:0005348"}


id: PBO:0038643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA thioesterase 11","termid":"PBO:0038643"}


id: GO:1904069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ascaroside.","definition_xrefs":["GO_REF:0000068","PMID:25775534","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ascaroside metabolic process","synonyms":[{"name":"ascaroside metabolism","type":"exact"}],"termid":"GO:1904069"}


id: PBO:0081524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 433","termid":"PBO:0081524"}


id: PATO:0001058
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001058 absolute acceleration (obsolete PATO:0001058)","termid":"PATO:0001058"}


id: GO:1901601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of strigolactone.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid biosynthetic process","termid":"GO:0016106"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"},{"relation_name":"is_a","term_name":"strigolactone metabolic process","termid":"GO:1901600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"strigolactone biosynthetic process","synonyms":[{"name":"strigolactone anabolism","type":"exact"},{"name":"strigolactone biosynthesis","type":"exact"},{"name":"strigolactone formation","type":"exact"},{"name":"strigolactone synthesis","type":"exact"}],"termid":"GO:1901601"}


id: GO:1905827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of selenocysteine metabolic process.","definition_xrefs":["PMID:19716792","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"positive regulation of amino acid metabolic process","termid":"GO:0045764"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of selenocysteine metabolic process","termid":"GO:1905825"},{"relation_name":"positively_regulates","term_name":"selenocysteine metabolic process","termid":"GO:0016259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"positive regulation of selenocysteine metabolic process","synonyms":[{"name":"activation of selenocysteine metabolic process","type":"narrow"},{"name":"activation of selenocysteine metabolism","type":"narrow"},{"name":"positive regulation of selenocysteine metabolism","type":"exact"},{"name":"up regulation of selenocysteine metabolic process","type":"exact"},{"name":"up regulation of selenocysteine metabolism","type":"exact"},{"name":"up-regulation of selenocysteine metabolic process","type":"exact"},{"name":"up-regulation of selenocysteine metabolism","type":"exact"},{"name":"upregulation of selenocysteine metabolic process","type":"exact"},{"name":"upregulation of selenocysteine metabolism","type":"exact"}],"termid":"GO:1905827"}


id: PBO:0079583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 C pseudogene 4","termid":"PBO:0079583"}


id: GO:0048532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the configuration of the constituent parts of an anatomical structure. This process pertains to the physical shaping of a rudimentary structure. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"},{"relation_name":"part_of","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anatomical structure arrangement","synonyms":[{"name":"anatomical structure organization","type":"broad"},{"name":"anatomical structure structural organization","type":"exact"},{"name":"organization of an anatomical structure","type":"exact"},{"name":"structural organization","type":"exact"}],"termid":"GO:0048532"}


id: PBO:0088653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome base subcomplex ATPase subunit Rpt4","termid":"PBO:0088653"}


id: PBO:0075072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 121B","termid":"PBO:0075072"}


id: PBO:0031769
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_fermentation","termid":"PBO:0031769"}


id: PBO:0043456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin and CBS domain divalent metal cation transport mediator 2","termid":"PBO:0043456"}


id: PBO:0057150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 298","termid":"PBO:0057150"}


id: PBO:0080995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 26","termid":"PBO:0080995"}


id: PATO:0001126
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001126 relative pressure value (obsolete PATO:0001126)","termid":"PATO:0001126"}


id: GO:0003401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental growth that results in the elongation of a line that defines polarity or symmetry in an anatomical structure.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axis elongation","synonyms":[{"name":"elongation of an axis","type":"related"}],"termid":"GO:0003401"}


