# terms

id: PBO:0068111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 418","termid":"PBO:0068111"}


id: GO:1990603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which the rods of the retina gradually become fully responsive to dim light when no longer exposed to bright light.","definition_xrefs":["GOC:hjd","PMID:35268448","PMID:11420957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to absence of light","termid":"GO:0071485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dark adaptation","termid":"GO:1990603"}


id: PBO:0051667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inactivation escape 1","termid":"PBO:0051667"}


id: PBO:0064259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing A7","termid":"PBO:0064259"}


id: PBO:0061604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleobindin 1","termid":"PBO:0061604"}


id: GO:0035514
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from one or more nucleosides within a DNA molecule.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"demethylase activity","termid":"GO:0032451"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140097","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"DNA demethylase activity","termid":"GO:0035514"}


id: GO:0042580
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialised tubular organelle, assembled in hexagonal bundles within an external membrane. Mannosomes are specific to molluscs and are thought to be involved in a general stress reaction.","definition_xrefs":["PMID:9799531","GOC:jl","PMID:11912051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005777"}],"interesting_parent_ids":["GO:0005777","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"mannosome","termid":"GO:0042580"}


id: PBO:0084214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I; required for the integrity of the active PtdIns-3-kinase complex I by maintaining an association between Vps15p-Vps34p and Atg14p-Vps30p subcomplexes; localizes to the pre-autophagosomal structure (PAS) in an Atg14p-dependent manner; ATG38 is non-essential but is required for macroautophagy","termid":"PBO:0084214"}


id: PBO:0039088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiotensin II receptor type 2","termid":"PBO:0039088"}


id: PBO:0065922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB, member of RAS oncogene family like 2A","termid":"PBO:0065922"}


id: PBO:0041384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 5 open reading frame 24","termid":"PBO:0041384"}


id: PBO:0000728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor, zf-fungal binuclear cluster type (predicted)","termid":"PBO:0000728"}


id: PBO:0068728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 17, pseudogene","termid":"PBO:0068728"}


id: FYPO:0000165
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which regulation of conjugation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal regulation of mating","synonyms":[{"name":"abnormal regulation of conjugation with cellular fusion","type":"exact"}],"termid":"FYPO:0000165"}


id: GO:0070343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of white fat cells by cell division, resulting in the expansion of their population.","definition_xrefs":["CL:0000448","GOC:mah","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fat cell proliferation","termid":"GO:0070341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"white fat cell proliferation","synonyms":[{"name":"white adipocyte proliferation","type":"exact"},{"name":"white adipose cell proliferation","type":"exact"}],"termid":"GO:0070343"}


id: GO:0075114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a symbiont interferes with, inhibits or disrupts a transmembrane receptor-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated suppression of host transmembrane receptor-mediated signal transduction (obsolete GO:0075114)","synonyms":[{"name":"disruption of host transmembrane receptor-mediated signal transduction","type":"exact"},{"name":"negative regulation by symbiont of host transmembrane receptor-mediated signal transduction","type":"exact"},{"name":"suppression by symbiont of host transmembrane receptor-mediated signal transduction","type":"exact"}],"termid":"GO:0075114"}


id: GO:0047466
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cis-2-chloro-4-carboxymethylenebut-2-en-1,4-olide = trans-2-chloro-4-carboxymethylenebut-2-en-1,4-olide.","definition_xrefs":["EC:5.2.1.10","RHEA:10924"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis-trans isomerase activity","termid":"GO:0016859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"2-chloro-4-carboxymethylenebut-2-en-1,4-olide isomerase activity","secondary_identifiers":["GO:0018840","MetaCyc:5.2.1.10-RXN","KEGG_REACTION:R04576","UM-BBD_reactionID:r0278"],"synonyms":[{"name":"2-chloro-4-carboxymethylenebut-2-en-1,4-olide cis-trans-isomerase activity","type":"related"},{"name":"2-chlorocarboxymethylenebutenolide isomerase activity","type":"related"},{"name":"chlorodienelactone isomerase activity","type":"related"}],"termid":"GO:0047466"}


id: PBO:0040760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beclin 1","termid":"PBO:0040760"}


id: PBO:0054238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1620","termid":"PBO:0054238"}


id: PBO:0070512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 11","termid":"PBO:0070512"}


id: PBO:0070586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 52","termid":"PBO:0070586"}


id: PBO:0074798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 13C","termid":"PBO:0074798"}


id: PBO:0024821
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human GEN1","termid":"PBO:0024821"}


id: PBO:0062801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein 2","termid":"PBO:0062801"}


id: PBO:0043440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 2","termid":"PBO:0043440"}


id: PR:000050518
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A SNF1-like protein kinase ssp2 (Schizosaccharomyces pombe) that has not been phosphorylated at the position equivalent to Thr-189 of the amino acid sequence represented by UniProtKB:O74536. Example: UniProtKB:O74536, Thr-189, MOD:00047.","definition_xrefs":["PRO:DAN","PMID:22375066","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNF1-like protein kinase ssp2 (Schizosaccharomyces pombe)","termid":"PR:000050516"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ssp2/UnPhos:(T189)","pombase_gene_id":"SPCC74.03c","synonyms":[{"name":"PomBase_original_PRO_term_name: SNF1-like protein kinase ssp2 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-ssp2/UnPhos:1","type":"exact"},{"name":"UniProtKB:O74536, Thr-189, PR:000026291","type":"narrow"},{"name":"ssp2/UnPhos:(T189)","type":"exact"}],"termid":"PR:000050518"}


id: FYPO:0004874
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the amount of glucose consumed by cells in a given time is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"},{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased glucose consumption","synonyms":[{"name":"decreased glucose consumption during mitotic cell cycle","type":"related"},{"name":"decreased glucose consumption during vegetative growth","type":"exact"},{"name":"decreased glucose uptake","type":"related"},{"name":"reduced glucose consumption","type":"exact"}],"termid":"FYPO:0004874"}


id: GO:0060877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pattern specification process that results in the subdivision of the otic epithelium in space to define an area or volume in which cells will differentiate to give rise to the semicircular canals.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"semicircular canal formation","termid":"GO:0060876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regionalization involved in semicircular canal formation","termid":"GO:0060877"}


id: PBO:0054304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1696","termid":"PBO:0054304"}


id: PBO:0074034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 20 pseudogene 1","termid":"PBO:0074034"}


id: PBO:0079680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3A pseudogene 2","termid":"PBO:0079680"}


id: PR:Q9Y7Y4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protoheme IX farnesyltransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03301","PANTHER:PTHR11048:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protoheme IX farnesyltransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.02c","secondary_identifiers":["UniProtKB:Q9Y7Y4"],"synonyms":[{"name":"Spom972h-COX10","type":"exact"},{"name":"heme O synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7Y4"}


id: PBO:0049426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 3","termid":"PBO:0049426"}


id: MOD:01151
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Covalent modification of, or a change resulting in an alteration of the measured molecular mass of, a peptide or protein amino acid phosphorylated residue with a secondary loss of a neutral trihydrogen phosphate molecular fragment.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue with neutral loss of phosphate","termid":"MOD:00432"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylated residue with neutral loss of phosphate","termid":"MOD:01151"}


id: GO:0032424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of mismatch repair.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mismatch repair","termid":"GO:0032423"},{"relation_name":"is_a","term_name":"negative regulation of DNA repair","termid":"GO:0045738"},{"relation_name":"negatively_regulates","term_name":"mismatch repair","termid":"GO:0006298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"negative regulation of mismatch repair","synonyms":[{"name":"down regulation of mismatch repair","type":"exact"},{"name":"down-regulation of mismatch repair","type":"exact"},{"name":"downregulation of mismatch repair","type":"exact"},{"name":"inhibition of mismatch repair","type":"narrow"}],"termid":"GO:0032424"}


id: PBO:0069868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1155, pseudogene","termid":"PBO:0069868"}


id: GO:0090122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cholesterol metabolic process in which cholesterol esters are hydrolyzed into free fatty acids and cholesterol in the lysosome that contributes to intracellular cholesterol transport.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholesterol metabolic process","termid":"GO:0008203"},{"relation_name":"part_of","term_name":"vesicle-mediated cholesterol transport","termid":"GO:0090119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006629","GO:0044281","GO:0006810"],"is_obsolete":false,"name":"cholesterol ester hydrolysis involved in cholesterol transport","termid":"GO:0090122"}


id: PBO:0065438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 1 pseudogene 11","termid":"PBO:0065438"}


id: PATO:0000393
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000393 maximal (obsolete PATO:0000393)","termid":"PATO:0000393"}


id: PBO:0056303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 2","termid":"PBO:0056303"}


id: PBO:0050793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HTR3E antisense RNA 1","termid":"PBO:0050793"}


id: GO:0061915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an actin fusion focus are transported to, or maintained in, a specific location. The actin fusion focus is an aster-like, F-actin-containing structure at the mating projection tip where the cell wall is degraded during conjugation with cellular fusion.","definition_xrefs":["PMID:28410370"],"gene_count":0,"genotype_count":0,"name":"obsolete actin fusion focus localization (obsolete GO:0061915)","synonyms":[{"name":"actin fusion focus localisation","type":"exact"}],"termid":"GO:0061915"}


id: PBO:0067245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 318, pseudogene","termid":"PBO:0067245"}


id: PBO:0029130
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA_recombination_at_mating_type_locus","termid":"PBO:0029130"}


id: GO:1901365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of funalenone.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"},{"relation_name":"is_a","term_name":"funalenone metabolic process","termid":"GO:1901364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"funalenone catabolic process","synonyms":[{"name":"funalenone breakdown","type":"exact"},{"name":"funalenone catabolism","type":"exact"},{"name":"funalenone degradation","type":"exact"}],"termid":"GO:1901365"}


id: PBO:0081737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 668","termid":"PBO:0081737"}


id: PBO:0000912
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inferred from genetic map position","termid":"PBO:0000912"}


id: PBO:0059545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Leu (CUN) 2","termid":"PBO:0059545"}


id: PBO:0067360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 459, pseudogene","termid":"PBO:0067360"}


id: GO:0044646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of complement activation in the bitten/stung organism.","definition_xrefs":["GOC:fj","PMID:20837040","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in modulation of complement activation in another organism (obsolete GO:0044646)","synonyms":[{"name":"envenomation resulting in modulation of complement activation in other organism","type":"exact"},{"name":"envenomation resulting in regulation of complement activation in other organism","type":"exact"}],"termid":"GO:0044646"}


id: PBO:0089645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glomulin, ubiquitin-protein transferase inhibitor Glm2","termid":"PBO:0089645"}


id: PBO:0002752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-factor precursor Mfm1","termid":"PBO:0002752"}


id: PBO:0090632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiolipin synthase/ hydrolase fusion protein Crd1","termid":"PBO:0090632"}


id: GO:0035809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the amount of urine excreted from the body over a unit of time.","definition_xrefs":["GOC:yaf","GOC:mtg_25march11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process","termid":"GO:0003014"},{"relation_name":"is_a","term_name":"regulation of body fluid levels","termid":"GO:0050878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of urine volume","synonyms":[{"name":"regulation of urinary volume","type":"exact"},{"name":"regulation of urine flow","type":"exact"}],"termid":"GO:0035809"}


id: PBO:0039052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiogenic factor with G-patch and FHA domains 1 pseudogene 1","termid":"PBO:0039052"}


id: PBO:0017888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer alpha subunit Cop1 (predicted)","termid":"PBO:0017888"}


id: PBO:0017695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation release factor","termid":"PBO:0017695"}


id: PBO:0064543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 4, pseudogene","termid":"PBO:0064543"}


id: MOD:00632
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because this chemical derivative modification from Unimod 321 is deprecated.","definition_xrefs":["Unimod:321"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00632 N-succinimide (obsolete MOD:00632)","termid":"MOD:00632"}


id: SO:0001859
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence CCCCTC, bound by the PKA-responsive zinc finger transcription factor Rst2.","definition_xrefs":["PMID:11739717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STREP_motif","synonyms":[{"name":"STREP motif","type":"related"},{"name":"stress-starvation response element of Schizosaccharomyces pombe","type":"exact"}],"termid":"SO:0001859"}


id: GO:0004528
data:
  {"annotated_genes":["SJAG_03994","SJAG_02298"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99262,106008],"is_not":false,"summary":null,"term":"GO:0004528"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential hydrolytic removal of 5'-nucleotides from the 3'-hydroxy termini of 3'-hydroxy-terminated oligonucleotides.","definition_xrefs":["EC:3.1.4.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exonuclease activity","termid":"GO:0004527"},{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02298":null,"SJAG_03994":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016788","GO:0004527","GO:0003824"],"is_obsolete":false,"name":"phosphodiesterase I activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.1.4.1-RXN"],"synonyms":[{"name":"5' nucleotide phosphodiesterase/alkaline phosphodiesterase I activity","type":"related"},{"name":"5'-NPDase activity","type":"related"},{"name":"5'-PDE activity","type":"related"},{"name":"5'-PDase activity","type":"related"},{"name":"5'-exonuclease activity","type":"related"},{"name":"5'-nucleotide phosphodiesterase activity","type":"related"},{"name":"5'-phosphodiesterase activity","type":"related"},{"name":"5'NPDE activity","type":"related"},{"name":"PDE I activity","type":"related"},{"name":"alkaline phosphodiesterase activity","type":"related"},{"name":"exonuclease I activity","type":"related"},{"name":"nucleotide pyrophosphatase/phosphodiesterase I activity","type":"related"},{"name":"oligonucleate 5'-nucleotidohydrolase activity","type":"related"},{"name":"orthophosphoric diester phosphohydrolase activity","type":"related"},{"name":"phosphodiesterase activity","type":"broad"}],"termid":"GO:0004528","terms_by_termid":{"GO:0004528":null}}


id: GO:1902157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to G2 DNA damage checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to DNA damage checkpoint signaling","termid":"GO:1902153"},{"relation_name":"regulates","term_name":"response to G2 DNA damage checkpoint signaling","termid":"GO:0072426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to G2 DNA damage checkpoint signaling","synonyms":[{"name":"regulation of G2/M transition DNA damage checkpoint effector process","type":"exact"},{"name":"regulation of response to signal involved in G2/M transition DNA damage checkpoint","type":"exact"}],"termid":"GO:1902157"}


id: PATO:0002267
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"edge shape","termid":"PATO:0002267"}


id: PBO:0043754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX7C pseudogene 2","termid":"PBO:0043754"}


id: PBO:0062312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily V member 1","termid":"PBO:0062312"}


id: GO:0061942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of c-di-GMP signaling.","definition_xrefs":["PMID:22864416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell communication","termid":"GO:0010648"},{"relation_name":"is_a","term_name":"negative regulation of signaling","termid":"GO:0023057"},{"relation_name":"is_a","term_name":"regulation of c-di-GMP signaling","termid":"GO:0061940"},{"relation_name":"negatively_regulates","term_name":"c-di-GMP signaling","termid":"GO:0061939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of c-di-GMP signaling","termid":"GO:0061942"}


id: GO:0102460
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: kaempferol-3-gentiobioside + UDP-L-rhamnose = H+ + kaempferol-3-O-gentiobioside-7-O-rhamnoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete kaempferol 3-gentiobioside 7-O-rhamnosyltransferase activity (obsolete GO:0102460)","termid":"GO:0102460"}


id: PBO:0027617
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_gamma-tubulin_complex_localization_to_mitotic_spindle_pole_body_following_normal_mitosis","termid":"PBO:0027617"}


id: GO:0052438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of callose deposition by the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of defense-related symbiont callose deposition (obsolete GO:0052438)","synonyms":[{"name":"modulation by organism of defense-related symbiont callose deposition","type":"exact"}],"termid":"GO:0052438"}


id: GO:0043480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation of coloring matter in a particular location in a tissue, occurring in response to an external stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"is_a","term_name":"pigment accumulation","termid":"GO:0043476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment accumulation in tissues","synonyms":[{"name":"organismal pigment accumulation","type":"exact"}],"termid":"GO:0043480"}


id: PBO:0003315
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.5.4","termid":"PBO:0003315"}


id: PBO:0086880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transcription factor; has homolog in Kluyveromyces lactis","termid":"PBO:0086880"}


id: GO:0005136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-4 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"interleukin-4 receptor binding","synonyms":[{"name":"IL-4","type":"narrow"},{"name":"interleukin-4 receptor ligand","type":"narrow"}],"termid":"GO:0005136"}


id: GO:0106357
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + sn-glycerol 1-phosphate = dihydroxyacetone phosphate + H+ + NADH.","definition_xrefs":["RHEA:21412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol-1-phosphate dehydrogenase [NAD(P)+] activity","termid":"GO:0050492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glycerol-1-phosphate dehydrogenase (NAD+) activity","synonyms":[{"name":"glycerol-1-phosphate dehydrogenase [NAD+] activity","type":"exact"}],"termid":"GO:0106357"}


id: PBO:0079577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 A","termid":"PBO:0079577"}


id: GO:0033901
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of poly(A), forming oligoribonucleotides and ultimately 3'-AMP.","definition_xrefs":["EC:3.1.27.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity, producing 3'-phosphomonoesters","termid":"GO:0016892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824","GO:0140098"],"is_obsolete":false,"name":"ribonuclease V activity","secondary_identifiers":["MetaCyc:3.1.27.8-RXN"],"synonyms":[{"name":"endoribonuclease V activity","type":"related"}],"termid":"GO:0033901"}


id: GO:0001195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Suppression of the occurrence of transcriptional errors, such as substitutions and/or insertions of nucleotides that do not correctly match the template base, during the process of transcription elongation from a RNA polymerase III promoter.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of transcriptional fidelity during transcription elongation","termid":"GO:0001192"},{"relation_name":"part_of","term_name":"transcription elongation by RNA polymerase III","termid":"GO:0006385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"maintenance of transcriptional fidelity during transcription elongation by RNA polymerase III","synonyms":[{"name":"maintenance of transcriptional fidelity during DNA-dependent transcription elongation from RNA polymerase III promoter","type":"exact"},{"name":"maintenance of transcriptional fidelity during DNA-templated transcription elongation from RNA polymerase III promoter","type":"exact"}],"termid":"GO:0001195"}


id: GO:0035855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a megakaryocyte cell over time, from its formation to the mature structure. Megakaryocyte development does not include the steps involved in committing a cell to a megakaryocyte fate. A megakaryocyte is a giant cell 50 to 100 micron in diameter, with a greatly lobulated nucleus, found in the bone marrow.","definition_xrefs":["GOC:BHF","CL:0000556","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell development","termid":"GO:0061515"},{"relation_name":"part_of","term_name":"megakaryocyte differentiation","termid":"GO:0030219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"megakaryocyte development","synonyms":[{"name":"megakaryocyte cell development","type":"exact"}],"termid":"GO:0035855"}


id: GO:0071531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process of protein complex assembly in which the arrangement and bonding together of the set of components that form the protein complex is mediated by a Rel homology domain (RHD) interaction.","definition_xrefs":["InterPro:IPR011539","GOC:amm"],"gene_count":0,"genotype_count":0,"name":"obsolete Rel homology domain-mediated complex assembly (obsolete GO:0071531)","synonyms":[{"name":"RHD domain-mediated complex assembly","type":"exact"}],"termid":"GO:0071531"}


id: PBO:0047020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A23","termid":"PBO:0047020"}


id: PBO:0091713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination protein Saw1","termid":"PBO:0091713"}


id: FYPO:0007986
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed during mitotic interphase in which the localization of a protein to the microtubule overlap of cytoplasmic microtubule bundles is decreased.","definition_xrefs":["PMID:19879140","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to interphase microtubule","termid":"FYPO:0006182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to interphase microtubule bundle overlap","termid":"FYPO:0007986"}


id: PBO:0000270
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin assembly function of H2Bub is independent of H3K4 methylation","termid":"PBO:0000270"}


id: PR:P87136
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC57A7.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C57A7.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A7.05","synonyms":[{"name":"Spom972h-SPAC57A7.05","type":"exact"}],"termid":"PR:P87136"}


id: GO:2000320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of T-helper 17 cell differentiation.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T-helper cell differentiation","termid":"GO:0045623"},{"relation_name":"is_a","term_name":"negative regulation of T-helper 17 type immune response","termid":"GO:2000317"},{"relation_name":"is_a","term_name":"regulation of T-helper 17 cell differentiation","termid":"GO:2000319"},{"relation_name":"negatively_regulates","term_name":"T-helper 17 cell differentiation","termid":"GO:0072539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of T-helper 17 cell differentiation","synonyms":[{"name":"negative regulation of T-helper 17 cell development","type":"related"}],"termid":"GO:2000320"}


id: GO:1901046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of oviposition.","definition_xrefs":["GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of egg-laying behavior","termid":"GO:0046662"},{"relation_name":"is_a","term_name":"positive regulation of behavior","termid":"GO:0048520"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"egg-laying behavior","termid":"GO:0018991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of egg-laying behavior","synonyms":[{"name":"activation of egg laying","type":"broad"},{"name":"activation of egg-laying","type":"broad"},{"name":"activation of oviposition","type":"narrow"},{"name":"positive regulation of egg laying","type":"broad"},{"name":"positive regulation of egg-laying","type":"broad"},{"name":"positive regulation of oviposition","type":"exact"},{"name":"up regulation of egg laying","type":"broad"},{"name":"up regulation of egg-laying","type":"broad"},{"name":"up regulation of oviposition","type":"exact"},{"name":"up-regulation of egg laying","type":"broad"},{"name":"up-regulation of egg-laying","type":"broad"},{"name":"up-regulation of oviposition","type":"exact"},{"name":"upregulation of egg laying","type":"broad"},{"name":"upregulation of egg-laying","type":"broad"},{"name":"upregulation of oviposition","type":"exact"}],"termid":"GO:1901046"}


id: PATO:0001320
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pilosity quality of being covered with short hairs or soft down.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hairy","termid":"PATO:0000454"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pubescent hair","termid":"PATO:0001320"}


id: GO:1904165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of triglyceride homeostasis.","definition_xrefs":["PMID:22541436","GOC:TermGenie","GOC:BHF","GO_REF:0000058","GOC:rph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of triglyceride homeostasis (obsolete GO:1904165)","synonyms":[{"name":"activation of triacylglycerol homeostasis","type":"narrow"},{"name":"activation of triglyceride homeostasis","type":"narrow"},{"name":"positive regulation of triacylglycerol homeostasis","type":"exact"},{"name":"up regulation of triacylglycerol homeostasis","type":"exact"},{"name":"up regulation of triglyceride homeostasis","type":"exact"},{"name":"up-regulation of triacylglycerol homeostasis","type":"exact"},{"name":"up-regulation of triglyceride homeostasis","type":"exact"},{"name":"upregulation of triacylglycerol homeostasis","type":"exact"},{"name":"upregulation of triglyceride homeostasis","type":"exact"}],"termid":"GO:1904165"}


id: PBO:0004628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleotide reductase small subunit Suc22","termid":"PBO:0004628"}


id: PBO:0080911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta","termid":"PBO:0080911"}


id: PBO:0063861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piezo type mechanosensitive ion channel component 1","termid":"PBO:0063861"}


id: PBO:0030285
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_sulfide_level","termid":"PBO:0030285"}


id: PBO:0080466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle trafficking 1 pseudogene 2","termid":"PBO:0080466"}


id: GO:0005838
data:
  {"annotated_genes":["SJAG_01203","SJAG_04477","SJAG_04211","SJAG_00738","SJAG_04144","SJAG_03638","SJAG_00762","SJAG_03321","SJAG_00766","SJAG_00712","SJAG_04484","SJAG_01489","SJAG_01544","SJAG_01652","SJAG_02900","SJAG_02992","SJAG_03408","SJAG_01131","SJAG_04088","SJAG_04572"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[106295,109103],"is_not":false,"summary":null,"term":"GO:0005838"},{"annotations":[109104,113494,103124,101382,111252,100133,92813,95004,106296],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0008540"},{"annotations":[98165,111331,90217,94862,97708,93163,95005,105356,92460,111222,107288,84923,100410],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0008541"}]},"cv_name":"cellular_component","definition":"A multisubunit complex, which caps one or both ends of the proteasome core complex. This complex recognizes and unfolds ubiquitinated proteins, and translocates them to the proteasome core complex.","definition_xrefs":["GOC:mtg_sensu","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"proteasome accessory complex","termid":"GO:0022624"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00712":null,"SJAG_00738":null,"SJAG_00762":null,"SJAG_00766":null,"SJAG_01131":null,"SJAG_01203":null,"SJAG_01489":null,"SJAG_01544":null,"SJAG_01652":null,"SJAG_02900":null,"SJAG_02992":null,"SJAG_03321":null,"SJAG_03408":null,"SJAG_03638":null,"SJAG_04088":null,"SJAG_04144":null,"SJAG_04211":null,"SJAG_04477":null,"SJAG_04484":null,"SJAG_04572":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proteasome regulatory particle","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"19S regulatory particle","type":"narrow"},{"name":"PA700 proteasome activator","type":"narrow"},{"name":"PA700-dependent proteasome activator","type":"exact"},{"name":"modulator complex","type":"related"}],"termid":"GO:0005838","terms_by_termid":{"GO:0005838":null,"GO:0008540":null,"GO:0008541":null}}


id: PBO:0028402
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_respiratory_electron_transport","termid":"PBO:0028402"}


id: GO:0002176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of male germ cells, resulting in the expansion of a cell population.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell proliferation","termid":"GO:0036093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male germ cell proliferation","termid":"GO:0002176"}


id: PBO:0017934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA transmembrane transporter (predicted)","termid":"PBO:0017934"}


id: GO:0009736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated by the binding of a cytokinin to a receptor, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:sm","PMID:24080474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"part_of","term_name":"cellular response to cytokinin stimulus","termid":"GO:0071368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cytokinin-activated signaling pathway","synonyms":[{"name":"cytokinin mediated signaling pathway","type":"related"},{"name":"cytokinin mediated signalling","type":"exact"},{"name":"cytokinin signaling","type":"exact"}],"termid":"GO:0009736"}


id: GO:0004197
data:
  {"annotated_genes":["SJAG_01283","SJAG_02542","SJAG_16454","SJAG_02214","SJAG_03672","SJAG_00135","SJAG_03292"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87671,111902,113646],"is_not":false,"summary":null,"term":"GO:0004197"},{"annotations":[110008,83515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003923"},{"annotations":[86332,102176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070139"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase activity","termid":"GO:0004175"},{"relation_name":"is_a","term_name":"cysteine-type peptidase activity","termid":"GO:0008234"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00135":null,"SJAG_01283":null,"SJAG_02214":null,"SJAG_02542":null,"SJAG_03292":null,"SJAG_03672":null,"SJAG_16454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0008233","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"cysteine-type endopeptidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9694732","Reactome:R-HSA-9686930","Reactome:R-HSA-9693929","Reactome:R-HSA-9694601","Reactome:R-HSA-201631","Reactome:R-HSA-5357828","Reactome:R-HSA-9729730","EC:3.4.22.-","Reactome:R-HSA-202917","Reactome:R-HSA-6814387","Reactome:R-HSA-1678920","Reactome:R-HSA-202967","Reactome:R-HSA-9686088","Reactome:R-HSA-201629","Reactome:R-HSA-201628","Reactome:R-HSA-418845","Reactome:R-HSA-2028692","Reactome:R-HSA-9697750","Reactome:R-HSA-9694377","Reactome:R-HSA-201603","Reactome:R-HSA-2562564","Reactome:R-HSA-9684336","Reactome:R-HSA-9694441","Reactome:R-HSA-418852","Reactome:R-HSA-9684321","Reactome:R-HSA-114252","Reactome:R-HSA-114261","Reactome:R-HSA-5681987","Reactome:R-HSA-1678981","Reactome:R-HSA-201611","Reactome:R-HSA-201608","Reactome:R-HSA-2028697","Reactome:R-HSA-202960","Reactome:R-HSA-9684273","Reactome:R-HSA-211186","Reactome:R-HSA-201639","Reactome:R-HSA-418846","Reactome:R-HSA-9647632","Reactome:R-HSA-9684309","Reactome:R-HSA-9684340","Reactome:R-HSA-9684351","Reactome:R-HSA-211651","Reactome:R-HSA-350319","Reactome:R-HSA-9694338","Reactome:R-HSA-202966","Reactome:R-HSA-2130349","Reactome:R-HSA-212552","Reactome:R-HSA-264871","Reactome:R-HSA-5660663","Reactome:R-HSA-201640","Reactome:R-HSA-9647680","Reactome:R-HSA-9684352","Reactome:R-HSA-9729704","Reactome:R-HSA-351871","Reactome:R-HSA-351876","Reactome:R-HSA-5682377","Reactome:R-HSA-2130706","Reactome:R-HSA-350651","Reactome:R-HSA-201634","Reactome:R-HSA-9694625","Reactome:R-HSA-351936","Reactome:R-HSA-9603534","Reactome:R-HSA-201630","Reactome:R-HSA-351913","Reactome:R-HSA-9013895","Reactome:R-HSA-2130336","Reactome:R-HSA-350158","Reactome:R-HSA-352268","Reactome:R-HSA-114259","Reactome:R-HSA-202969","Reactome:R-HSA-350318","Reactome:R-HSA-9012556","Reactome:R-HSA-3465448","Reactome:R-HSA-201622","Reactome:R-HSA-264865","Reactome:R-HSA-202947","Reactome:R-HSA-201636","Reactome:R-HSA-201637","Reactome:R-HSA-448703","Reactome:R-HSA-9694551","Reactome:R-HSA-201595","Reactome:R-HSA-9729741","Reactome:R-HSA-139952","Reactome:R-HSA-351901","Reactome:R-HSA-202939","Reactome:R-HSA-351877","Reactome:R-HSA-1236948","Reactome:R-HSA-351894","Reactome:R-HSA-9647999","Reactome:R-HSA-9710101","Reactome:R-HSA-5634228","Reactome:R-HSA-351849","Reactome:R-HSA-2130504","Reactome:R-HSA-933532","Reactome:R-HSA-211190","Reactome:R-HSA-139898"],"synonyms":[{"name":"caspase activity","type":"narrow"},{"name":"lysosomal cysteine-type endopeptidase","type":"narrow"},{"name":"metacaspase activity","type":"narrow"},{"name":"thiol endopeptidase activity","type":"exact"}],"termid":"GO:0004197","terms_by_termid":{"GO:0003923":null,"GO:0004197":null,"GO:0070139":null}}


id: PBO:0002558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein involved in meiosis Mei2","termid":"PBO:0002558"}


id: GO:0043449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an alkene, any acyclic branched or unbranched hydrocarbon having one carbon-carbon double bond and the general formula CnH2n, as carried out by individual cells.","definition_xrefs":["GOC:jl","Wikipedia:Alkene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolic process","termid":"GO:0044237"},{"relation_name":"is_a","term_name":"olefin metabolic process","termid":"GO:1900673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular alkene metabolic process","synonyms":[{"name":"alkene metabolism","type":"exact"}],"termid":"GO:0043449"}


id: PBO:0045556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 8","termid":"PBO:0045556"}


id: PBO:0052705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 17 pseudogene 6","termid":"PBO:0052705"}


id: GO:0050647
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 5-hydroxy-6E,8Z,11Z,14Z-icosatetraenoic acid, a straight-chain fatty acid with twenty carbon atoms and four double bonds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid binding","termid":"GO:0036041"},{"relation_name":"is_a","term_name":"icosanoid binding","termid":"GO:0050542"},{"relation_name":"is_a","term_name":"fatty acid derivative binding","termid":"GO:1901567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"5-hydroxy-6E,8Z,11Z,14Z-icosatetraenoic acid binding","synonyms":[{"name":"5-hydroxy-6E,8Z,11Z,14Z-eicosatetraenoic acid binding","type":"exact"}],"termid":"GO:0050647"}


id: FYPO:0002557
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the medial cortex is decreased in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortex during vegetative growth","termid":"FYPO:0000731"},{"relation_name":"is_a","term_name":"decreased protein localization to cell cortex during vegetative growth","termid":"FYPO:0000929"},{"relation_name":"is_a","term_name":"decreased protein localization to cell division site","termid":"FYPO:0002869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to medial cortex during vegetative growth","synonyms":[{"name":"decreased protein localisation to medial cortex during vegetative growth","type":"exact"},{"name":"decreased protein localization to medial cortex during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to medial ring during vegetative growth","type":"exact"},{"name":"reduced protein localization to medial cortex during vegetative growth","type":"exact"}],"termid":"FYPO:0002557"}


id: GO:0008795
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + deamido-NAD+ + NH3 = AMP + diphosphate + NAD+.","definition_xrefs":["EC:6.3.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-ammonia (or amide) ligase activity","termid":"GO:0016880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"NAD+ synthase activity","secondary_identifiers":["MetaCyc:NAD-SYNTH-NH3-RXN","RHEA:21188","GO:0008749","GO:0016965"],"synonyms":[{"name":"NAD synthase (AMP-forming)","type":"exact"},{"name":"NAD synthase activity","type":"exact"},{"name":"NAD synthetase activity","type":"related"},{"name":"NAD(+) synthetase activity","type":"related"},{"name":"NAD+ synthetase activity","type":"related"},{"name":"deamido-NAD+:ammonia ligase (AMP-forming)","type":"related"},{"name":"diphosphopyridine nucleotide synthetase activity","type":"related"},{"name":"nicotinamide adenine dinucleotide synthetase activity","type":"related"}],"termid":"GO:0008795"}


id: PATO:0000088
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000088 absolute disease sensitivity (obsolete PATO:0000088)","termid":"PATO:0000088"}


id: GO:0015668
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of DNA to give double-stranded fragments with terminal 5'-phosphates. ATP hydrolysis is required. Cleavage is dependent on the presence of two copies of a specific recognition sequence in an inverse orientation in the DNA. Cleavage occurs at a specific distance from one of the recognition sites.","definition_xrefs":["PMID:12654995","EC:3.1.21.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"restriction endodeoxyribonuclease activity","termid":"GO:0015666"},{"relation_name":"is_a","term_name":"endodeoxyribonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140097","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"type III site-specific deoxyribonuclease activity","secondary_identifiers":["MetaCyc:3.1.21.5-RXN"],"synonyms":[{"name":"type III restriction enzyme activity","type":"exact"}],"termid":"GO:0015668"}


id: PBO:0084645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Microtubule plus-end-tracking non-motor protein; binds to MTs, stabilizing interpolar MT plus ends, facilitating polymerization of spindle MTs and producing an outward force on spindle poles; required for structural integrity of the mitotic spindle; binds detached kinetochores (KTs) and promotes capture; relocalizes to MTs and stabilizes the spindle once captured KTs reach a spindle pole; localizes to the spindle, spindles poles, and detached KTs; CLASP family member homologous to human CLASP1/2","termid":"PBO:0084645"}


id: GO:1990448
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an exon-exon junction complex, a protein complex deposited by the spliceosome upstream of messenger RNA exon-exon junctions. The exon-exon junction complex provides a binding platform for factors involved in mRNA export and nonsense-mediated mRNA decay.","definition_xrefs":["PMID:24967911","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"exon-exon junction complex binding","synonyms":[{"name":"EJC binding","type":"exact"}],"termid":"GO:1990448"}


id: GO:0005044
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with any modified low-density lipoprotein (LDL) or other polyanionic ligand and delivering the ligand into the cell via endocytosis. Ligands include acetylated and oxidized LDL, Gram-positive and Gram-negative bacteria, apoptotic cells, amyloid-beta fibrils, and advanced glycation end products (AGEs).","definition_xrefs":["GOC:bf","PMID:12621157","PMID:12379907","PMID:11790542","PMID:20981357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cargo receptor activity","termid":"GO:0038024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038024"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038024"],"is_obsolete":false,"name":"scavenger receptor activity","synonyms":[{"name":"macrophage receptor activity","type":"narrow"}],"termid":"GO:0005044"}


id: GO:0000489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 4.5S rRNA, and the 5S rRNA in that order from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of SSU-rRNA","termid":"GO:0030490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0042254","GO:0008150","GO:0044085","GO:0010467"],"is_obsolete":false,"name":"maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)","termid":"GO:0000489"}


id: PBO:0044096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 47 member A4","termid":"PBO:0044096"}


id: PBO:0028305
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_mitotic_G1_phase","termid":"PBO:0028305"}


id: FYPO:0004084
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell that is subject to nitrogen starvation is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level","termid":"FYPO:0004083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein level during nitrogen starvation","synonyms":[{"name":"normal cellular protein level during nitrogen starvation","type":"exact"},{"name":"normal protein accumulation during nitrogen starvation","type":"related"},{"name":"normal protein level during nitrogen depletion","type":"exact"},{"name":"normal protein level during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0004084"}


id: PBO:0084095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide exchange factor (GEF) for Rho1p; mutations are synthetically lethal with mutations in rom2, which also encodes a GEP; ROM1 has a paralog, ROM2, that arose from the whole genome duplication","termid":"PBO:0084095"}


id: PBO:0016058
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Splicing EndoNuclease","termid":"PBO:0016058"}


id: GO:0016614
data:
  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acceptors","type":"narrow"}],"termid":"GO:0016614","terms_by_termid":{"GO:0000140":null,"GO:0000252":null,"GO:0000253":null,"GO:0003862":null,"GO:0003885":null,"GO:0003938":null,"GO:0003939":null,"GO:0004022":null,"GO:0004032":null,"GO:0004033":null,"GO:0004316":null,"GO:0004345":null,"GO:0004399":null,"GO:0004412":null,"GO:0004420":null,"GO:0004450":null,"GO:0004455":null,"GO:0004458":null,"GO:0004471":null,"GO:0004616":null,"GO:0004617":null,"GO:0004757":null,"GO:0004764":null,"GO:0008106":null,"GO:0008703":null,"GO:0008720":null,"GO:0008888":null,"GO:0016614":null,"GO:0016616":null,"GO:0016618":null,"GO:0030060":null,"GO:0030267":null,"GO:0032866":null,"GO:0032867":null,"GO:0043892":null,"GO:0045703":null,"GO:0046526":null,"GO:0047012":null,"GO:0047018":null,"GO:0047019":null,"GO:0047046":null,"GO:0047560":null,"GO:0047935":null,"GO:0050236":null,"GO:0080007":null,"GO:0099615":null,"GO:0103066":null,"GO:0103067":null,"GO:0106321":null,"GO:0106322":null,"GO:0141040":null,"GO:0141152":null}}


id: GO:0052203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in enzyme activity in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of catalytic activity in other organism involved in symbiotic interaction (obsolete GO:0052203)","synonyms":[{"name":"modulation of enzyme activity within other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0052203"}


id: PBO:0039797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3","termid":"PBO:0039797"}


id: PBO:0013808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Usp103","termid":"PBO:0013808"}


id: PBO:0074733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 91","termid":"PBO:0074733"}


id: PBO:0038737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin like 9","termid":"PBO:0038737"}


id: PBO:0082936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic ATP-dependent RNA helicase of the DEAD-box family; involved in mRNA export from the nucleus, remodeling messenger ribonucleoprotein particles (mRNPs), with ATPase activity stimulated by Gle1p, IP6 and Nup159p; involved in translation termination along with Sup45p (eRF1); role in the cellular response to heat stress","termid":"PBO:0082936"}


id: PBO:0089098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer gamma subunit Sec21","termid":"PBO:0089098"}


id: PBO:0089251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaxin 2 (Sam35)","termid":"PBO:0089251"}


id: GO:0030374
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A transcription coactivator activity that activates or increases the transcription of specific gene sets via binding to a DNA-bound nuclear receptor, either on its own or as part of a complex. Coactivators often act by altering chromatin structure and modifications. For example, one class of transcription coregulators modifies chromatin structure through covalent modification of histones. A second class remodels the conformation of chromatin in an ATP-dependent fashion. A third class modulates interactions of DNA-bound DNA-binding transcription factors with other transcription coregulators. A fourth class of coactivator activity is the bridging of a DNA-binding transcription factor to the general (basal) transcription machinery. The Mediator complex, which bridges sequence-specific DNA binding transcription factors and RNA polymerase, is also a transcription coactivator.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription coactivator activity","termid":"GO:0003713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003713"},{"rel_name":"is_a","termid":"GO:0003712"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030674","GO:0060090","GO:0003674","GO:0003712","GO:0140110","GO:0003713"],"is_obsolete":false,"name":"nuclear receptor coactivator activity","secondary_identifiers":["GO:0038049"],"synonyms":[{"name":"ligand-activated RNA polymerase II transcription factor binding transcription factor activity","type":"exact"},{"name":"ligand-dependent nuclear receptor transcription co-activator activity","type":"exact"},{"name":"ligand-dependent nuclear receptor transcription coactivator activity","type":"exact"},{"name":"nuclear receptor transcription coactivator activity","type":"exact"},{"name":"transcription factor activity, ligand-activated RNA polymerase II transcription factor binding","type":"exact"}],"termid":"GO:0030374"}


id: GO:0032400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a melanosome is transported to, and/or maintained in, a specific location within the cell.","definition_xrefs":["GOC:ln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment granule localization","termid":"GO:0051875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"melanosome localization","synonyms":[{"name":"melanosome localisation","type":"exact"}],"termid":"GO:0032400"}


id: GO:0042069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving catecholamines.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"is_a","term_name":"regulation of primary metabolic process","termid":"GO:0080090"},{"relation_name":"regulates","term_name":"catecholamine metabolic process","termid":"GO:0006584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of catecholamine metabolic process","synonyms":[{"name":"regulation of catecholamine metabolism","type":"exact"}],"termid":"GO:0042069"}


id: PATO:0000661
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000661 solid substance value (obsolete PATO:0000661)","termid":"PATO:0000661"}


id: PBO:0057914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3617","termid":"PBO:0057914"}


id: _global:colocalizes_with
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"a colocalizes_with b if and only if  a is transiently or peripherally associated with b[GO].","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"mereotopologically_related_to","termid":"_global:mereotopologically_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colocalizes_with","secondary_identifiers":["RO:0002325"],"termid":"_global:colocalizes_with"}


id: GO:0061603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction GTP + molybdenum cofactor = diphosphate + guanylyl molybdenum cofactor.","definition_xrefs":["GOC:dph","EC:2.7.7.77"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0016779","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"molybdenum cofactor guanylyltransferase activity","secondary_identifiers":["RHEA:34243"],"termid":"GO:0061603"}


id: PBO:0030825
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_heterothallic_h+_cells","termid":"PBO:0030825"}


id: PBO:0076622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin folding cofactor D","termid":"PBO:0076622"}


id: GO:0097259
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 20-oxo-leukotriene B4 + O2 + reduced [NADPH-hemoprotein reductase] = 20-carboxy-leukotriene B4 + 2 H+ + H2O + oxidized [NADPH-hemoprotein reductase].","definition_xrefs":["PMID:9675028","PMID:2549038","PMID:2836406","RHEA:48672","GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"20-aldehyde-leukotriene B4 20-monooxygenase activity","secondary_identifiers":["Reactome:R-HSA-2161979","Reactome:R-HSA-2161792"],"termid":"GO:0097259"}


id: FYPO:0001467
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell phenotype observed in the vegetative growth phase of the life cycle in which the steady-state intracellular calcium ion (Ca2+) concentration increases normally following an extracellular Ca2+ stimulus. Normally, a dose-dependent increased steady-state Ca2+ concentration is reached within 2-3 minutes of extracellular Ca2+ addition, and is sustained for several hours.","definition_xrefs":["PMID:21811607","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete normal increase in steady-state intracellular calcium level following extracellular calcium stimulus (obsolete FYPO:0001467)","synonyms":[{"name":"normal increase in steady-state intracellular calcium level following extracellular calcium stimulus","type":"exact"},{"name":"normal increase in steady-state intracellular calcium level following extracellular calcium stimulus during mitotic cell cycle","type":"related"},{"name":"normal increase in steady-state intracellular calcium level following extracellular calcium stimulus during vegetative growth","type":"exact"}],"termid":"FYPO:0001467"}


id: PR:G2TRQ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3E7.17 gene.","definition_xrefs":["UniProtKB:G2TRQ5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3E7.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.17","synonyms":[{"name":"Spom972h-SPBC3E7.17","type":"exact"}],"termid":"PR:G2TRQ5"}


id: PBO:0069647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 924, pseudogene","termid":"PBO:0069647"}


id: FYPO:0008163
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of nuclear foci are increased.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased number of nuclear foci","termid":"FYPO:0008163"}


id: PBO:0050191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 8","termid":"PBO:0050191"}


id: PBO:0064013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 47","termid":"PBO:0064013"}


id: PBO:0064552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 14, pseudogene","termid":"PBO:0064552"}


id: GO:0030725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Assembly of the cytoplasmic bridges between developing spermatogonial or oogonial cysts.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"intercellular bridge organization","termid":"GO:0043063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germline ring canal formation","synonyms":[{"name":"ring canal formation","type":"broad"}],"termid":"GO:0030725"}


id: PBO:0069881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1169, pseudogene","termid":"PBO:0069881"}


id: PBO:0067900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 202","termid":"PBO:0067900"}


id: PBO:0085293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pheromone-regulated multispanning membrane protein; involved in membrane fusion during mating; predicted to have 5 transmembrane segments and a coiled coil domain; localizes to the shmoo tip; regulated by Ste12p","termid":"PBO:0085293"}


id: GO:0097697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-carboxymethoxyuridine34 in tRNA + S-adenosyl-L-methionine = 5-methoxycarbonylmethoxyuridine34 in tRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:54080","PMID:26681692"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (uridine) methyltransferase activity","termid":"GO:0016300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0016740","GO:0140098","GO:0003674","GO:0140101"],"is_obsolete":false,"name":"tRNA (5-carboxymethoxyuridine(34)-5-O)-methyltransferase activity","synonyms":[{"name":"tRNA 5-carboxymethoxyuridine methyltransferase activity","type":"related"}],"termid":"GO:0097697"}


id: PBO:0043933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cartilage acidic protein 1","termid":"PBO:0043933"}


id: PBO:0047060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 120A2, pseudogene","termid":"PBO:0047060"}


id: PBO:0058387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4759","termid":"PBO:0058387"}


id: PBO:0001812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1749 family protein","termid":"PBO:0001812"}


id: GO:0061816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The selective degradation of proteasomes by macroautophagy.","definition_xrefs":["GOC:se","PMID:26670610","PMID:27477278","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006914","GO:0044248"],"is_obsolete":false,"name":"proteaphagy","termid":"GO:0061816"}


id: PBO:0034359
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_syngeny_relationship_with","termid":"PBO:0034359"}


id: FYPO:0001216
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the assembly of a SAGA complex onto chromatin is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal SAGA complex assembly","synonyms":[{"name":"normal SAGA complex assembly during mitotic cell cycle","type":"related"},{"name":"normal SAGA complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0001216"}


id: SO:0001976
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A restriction enzyme recognition site that, when cleaved, results in 3 prime overhangs.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sticky_end_restriction_enzyme_cleavage_site","termid":"SO:0001692"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_sticky_end_restriction_enzyme_cleavage_site","synonyms":[{"name":"three prime sticky end restriction enzyme cleavage site","type":"exact"}],"termid":"SO:0001976"}


id: GO:0000127
data:
  {"annotated_genes":["SJAG_01827","SJAG_00585","SJAG_03546","SJAG_03354","SJAG_05339","SJAG_02815"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84257,95637,102974,105184,108706,111432],"is_not":false,"summary":null,"term":"GO:0000127"}]},"cv_name":"cellular_component","definition":"A heterotrimeric transcription factor complex that is involved in regulating transcription from RNA polymerase III (Pol III) promoters. TFIIIC contains three conserved subunits that associate with the proximal Pol III promoter element, and additional subunits that associate with sequence elements downstream of the promoter and are more diverged among species. It also functions as a boundary element to partition genome content into distinct domains outside Pol III promoter regions.","definition_xrefs":["PMID:11433012","GOC:mah","GOC:vw","PMID:16751097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase III transcription regulator complex","termid":"GO:0090576"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00585":null,"SJAG_01827":null,"SJAG_02815":null,"SJAG_03354":null,"SJAG_03546":null,"SJAG_05339":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"transcription factor TFIIIC complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000127","terms_by_termid":{"GO:0000127":null}}


id: PBO:0064240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol specific phospholipase C X domain containing 3","termid":"PBO:0064240"}


id: PBO:0055281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2708","termid":"PBO:0055281"}


id: PBO:0071964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase A3","termid":"PBO:0071964"}


id: GO:2000594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of metanephric DCT cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of metanephric DCT cell differentiation","termid":"GO:2000592"},{"relation_name":"positively_regulates","term_name":"metanephric DCT cell differentiation","termid":"GO:0072240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of metanephric DCT cell differentiation","synonyms":[{"name":"positive regulation of metanephric distal convoluted tubule cell differentiation","type":"exact"}],"termid":"GO:2000594"}


id: GO:0014828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the distal stomach. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The distal stomach is composed of the lower body and antrum and develops strong peristaltic phasic contractions that increase in amplitude as they propagate toward the pylorus.","definition_xrefs":["GOC:mtg_muscle","PMID:30252381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phasic smooth muscle contraction","termid":"GO:0014821"},{"relation_name":"is_a","term_name":"stomach smooth muscle contraction","termid":"GO:0120063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"distal stomach smooth muscle contraction","termid":"GO:0014828"}


id: PBO:0079698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBL7 divergent transcript","termid":"PBO:0079698"}


id: PBO:0027147
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_farnesyltranstransferase_activity","termid":"PBO:0027147"}


id: GO:0047382
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-methyl-3-phospho-1-thio-D-glycerate + H2O = S-methyl-1-thio-D-glycerate + phosphate.","definition_xrefs":["EC:3.1.3.14","RHEA:16081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"methylphosphothioglycerate phosphatase activity","secondary_identifiers":["MetaCyc:3.1.3.14-RXN","KEGG_REACTION:R04317"],"synonyms":[{"name":"S-methyl-3-phospho-1-thio-D-glycerate phosphohydrolase activity","type":"related"},{"name":"methylthiophosphoglycerate phosphatase activity","type":"related"}],"termid":"GO:0047382"}


id: GO:0060926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a pacemaker cell over time, from its formation to the mature state. Pacemaker cells are specialized cardiomyocytes that are responsible for regulating the timing of heart contractions.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell development","termid":"GO:0055013"},{"relation_name":"part_of","term_name":"cardiac pacemaker cell differentiation","termid":"GO:0060920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac pacemaker cell development","synonyms":[{"name":"pacemaker cell development","type":"broad"}],"termid":"GO:0060926"}


id: PBO:0061061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NKAIN1 pseudogene 1","termid":"PBO:0061061"}


id: GO:0047867
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-3,3-dimethylmalate + NAD+ = 3-methyl-2-oxobutanoate + CO2 + NADH.","definition_xrefs":["RHEA:13321","EC:1.1.1.84"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dimethylmalate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R01211","MetaCyc:DIMETHYLMALATE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"(R)-3,3-dimethylmalate:NAD+ oxidoreductase (decarboxylating)","type":"related"},{"name":"beta,beta-dimethylmalate dehydrogenase activity","type":"related"}],"termid":"GO:0047867"}


id: PBO:0053596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 623","termid":"PBO:0053596"}


id: PBO:0050697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 12A","termid":"PBO:0050697"}


id: GO:0009301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of small nuclear RNA (snRNA) from a DNA template.","definition_xrefs":["ISBN:0321000382","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"},{"relation_name":"is_a","term_name":"snRNA metabolic process","termid":"GO:0016073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016073"},{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016073","GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"snRNA transcription","termid":"GO:0009301"}


id: PBO:0072610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal L24 domain containing 1 pseudogene 5","termid":"PBO:0072610"}


id: FYPO:0000784
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the nucleus is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"},{"relation_name":"is_a","term_name":"protein mislocalized to nucleus","termid":"FYPO:0003453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"protein mislocalized to nucleus during vegetative growth","secondary_identifiers":["FYPO:0001251"],"synonyms":[{"name":"ectopic protein localization to nucleus during vegetative growth","type":"exact"},{"name":"protein mislocalised to nucleus during vegetative growth","type":"exact"},{"name":"protein mislocalized to nucleus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000784"}


id: PBO:0045585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine triphosphatase pseudogene 7","termid":"PBO:0045585"}


id: PBO:0084793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein; required for respiratory growth under some conditions and for stability of the mitochondrial genome; subunit of a complex containing Mrx6p, Pim1p, and Mam33p that may regulate mtDNA replication","termid":"PBO:0084793"}


id: PBO:0078494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon GAT) 1-1","termid":"PBO:0078494"}


id: PBO:0055229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2655","termid":"PBO:0055229"}


id: GO:0075336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont adenylate cyclase-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of symbiont adenylate cyclase-mediated signal transduction in response to host (obsolete GO:0075336)","termid":"GO:0075336"}


id: GO:0106142
data:
  {"annotated_genes":["SJAG_03713"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94470],"is_not":false,"summary":null,"term":"GO:0106142"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + adenine(645) in 25S rRNA = S-adenosyl-L-homocysteine + N(1)-methyladenine(645) in 25S rRNA.","definition_xrefs":["PMID:23180764","EC:2.1.1.287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (adenine) methyltransferase activity","termid":"GO:0016433"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0016740","GO:0003674","GO:0140098"],"is_obsolete":false,"name":"rRNA (adenine-N1-)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:43792"],"synonyms":[{"name":"25S rRNA m(1)A(645) methyltransferase","type":"related"},{"name":"25S rRNA (adenine(645)-N(1))-methyltransferase","type":"related"}],"termid":"GO:0106142","terms_by_termid":{"GO:0106142":null}}


id: PBO:0028971
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-excess_Golgi_cisternae_present","termid":"PBO:0028971"}


id: PBO:0029455
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_glutamate_import","termid":"PBO:0029455"}


id: GO:0009291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of unidirectional (polarized) transfer of genetic information involving direct cellular contact between a donor and recipient cell; the contact is followed by the formation of a cellular bridge that physically connects the cells. Some or all of the chromosome(s) of the donor cell is transferred into the recipient cell.","definition_xrefs":["Wikipedia:Bacterial_conjugation"],"direct_ancestors":[{"relation_name":"is_a","term_name":"horizontal gene transfer","termid":"GO:0009292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"unidirectional conjugation","synonyms":[{"name":"bacterial conjugation","type":"related"}],"termid":"GO:0009291"}


id: PBO:0089071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial phospholipid scramblase","termid":"PBO:0089071"}


id: PBO:0016560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"di-trans,poly-cis-decaprenylcistransferase Nus1","termid":"PBO:0016560"}


id: PBO:0076862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 12","termid":"PBO:0076862"}


id: SO:0000361
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe sequence that is flanked by the FLP recombinase recognition site, FRT.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flanked","termid":"SO:0000357"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRT_flanked","synonyms":[{"name":"FRT flanked","type":"exact"}],"termid":"SO:0000361"}


id: GO:0052727
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: antheraxanthin = capsanthin.","definition_xrefs":["EC:5.3.99.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"capsanthin synthase activity","secondary_identifiers":["MetaCyc:RXN-7947","RHEA:17373"],"synonyms":[{"name":"CCS","type":"related"},{"name":"capsanthin-capsorubin synthase activity","type":"broad"},{"name":"ketoxanthophyll synthase activity","type":"broad"}],"termid":"GO:0052727"}


id: GO:1904653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lung alveolus development.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23962064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"lung alveolus development","termid":"GO:0048286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lung alveolus development","synonyms":[{"name":"regulation of alveolarization","type":"exact"},{"name":"regulation of alveologenesis","type":"exact"}],"termid":"GO:1904653"}


id: PBO:0079230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 7A","termid":"PBO:0079230"}


id: PBO:0050963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon lambda 4 pseudogene 1","termid":"PBO:0050963"}


id: FYPO:0005606
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the region of a chromosome at which a DNA double-strand break has occurred begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to double-strand break site","termid":"FYPO:0002473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of protein localization to double-strand break site","synonyms":[{"name":"delayed onset of protein localisation to double-strand break site","type":"exact"},{"name":"delayed onset of protein localization to DSB site","type":"exact"},{"name":"delayed onset of protein localization to double-strand break site during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein localization to double-strand break site during vegetative growth","type":"exact"},{"name":"delayed onset of protein localization to site of double-strand break","type":"exact"},{"name":"delayed protein localization to double-strand break site","type":"exact"}],"termid":"FYPO:0005606"}


id: GO:0046292
data:
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id: GO:0045491
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id: GO:0044045
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id: GO:0018274
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id: PBO:0003921
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id: PBO:0048438
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id: GO:0048853
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id: GO:0008342
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id: PBO:0062246
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id: PBO:0004789
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id: GO:0034655
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id: GO:1901918
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of exoribonuclease activity.","definition_xrefs":["PMID:22570495","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ribonuclease activity","termid":"GO:0060701"},{"relation_name":"is_a","term_name":"regulation of exoribonuclease activity","termid":"GO:1901917"},{"relation_name":"is_a","term_name":"negative regulation of exonuclease activity","termid":"GO:1905778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of exoribonuclease activity","synonyms":[{"name":"down regulation of exoribonuclease activity","type":"exact"},{"name":"down-regulation of exoribonuclease activity","type":"exact"},{"name":"downregulation of exoribonuclease activity","type":"exact"},{"name":"inhibition of exoribonuclease activity","type":"narrow"}],"termid":"GO:1901918"}


id: PBO:0058556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6165","termid":"PBO:0058556"}


id: SO:0001890
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature fusion where the deletion brings together a regulatory region and a transcript region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_fusion","termid":"SO:0001882"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_regulatory_region_fusion","synonyms":[{"name":"transcript regulatory region fusion","type":"exact"}],"termid":"SO:0001890"}


id: PBO:0002377
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication ATPase (predicted)","termid":"PBO:0002377"}


id: PBO:0084614
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Metalloendopeptidase of the mitochondrial inner membrane; important for adaptive responses to various homeostatic insults, preservation of normal mitochondrial function under damage-eliciting conditions, and stability of respiratory supercomplexes; involved in turnover of membrane-embedded proteins; mediates degradation of Cox1p in coa2 mutant cells; zebrafish ortholog has a role in organ development and mouse ortholog is also required for respiratory supercomplex stability","termid":"PBO:0084614"}


id: PBO:0001205
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Pmc5","termid":"PBO:0001205"}


id: PBO:0074231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 47 member 1","termid":"PBO:0074231"}


id: PBO:0045471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmentally regulated GTP binding protein 1","termid":"PBO:0045471"}


id: PBO:0029503
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_with_elongated,_curved_germ_tube","termid":"PBO:0029503"}


id: PBO:0110365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPCIP antisense RNA 1","termid":"PBO:0110365"}


id: PBO:0018158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-galactose transmembrane transporter Gms1","termid":"PBO:0018158"}


id: PBO:0044534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol lipase alpha","termid":"PBO:0044534"}


id: GO:1905521
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of macrophage migration.","definition_xrefs":["GOC:TermGenie","PMID:25749876","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mononuclear cell migration","termid":"GO:0071675"},{"relation_name":"regulates","term_name":"macrophage migration","termid":"GO:1905517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of macrophage migration","termid":"GO:1905521"}


id: PBO:0056940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9-1","termid":"PBO:0056940"}


id: PBO:0029688
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_hydrogen_peroxide-induced_proteins_during_vegetative_growth","termid":"PBO:0029688"}


id: GO:0050641
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + 3 H+ + 3 malonyl-CoA + NADPH = 6-methylsalicylate + 3 CO2 + 4 CoA + H2O + NADP+.","definition_xrefs":["RHEA:12240","EC:2.3.1.165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"6-methylsalicylic acid synthase activity","secondary_identifiers":["MetaCyc:2.3.1.165-RXN","KEGG_REACTION:R07253"],"synonyms":[{"name":"6-MSAS activity","type":"related"},{"name":"MSAS activity","type":"related"},{"name":"acyl-CoA:malonyl-CoA C-acyltransferase (decarboxylating, oxoacyl-reducing, thioester-hydrolysing and cyclizing)","type":"related"}],"termid":"GO:0050641"}


id: GO:0070278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of molecules that form the extracellular matrix, including carbohydrates and glycoproteins by a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion by cell","termid":"GO:0032940"},{"relation_name":"part_of","term_name":"extracellular matrix organization","termid":"GO:0030198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"extracellular matrix constituent secretion","synonyms":[{"name":"ECM constituent secretion","type":"exact"},{"name":"ECM secretion","type":"exact"}],"termid":"GO:0070278"}


id: PATO:0000212
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000212 neural function (obsolete PATO:0000212)","termid":"PATO:0000212"}


id: FYPO:0002725
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of L-aminoadipate-semialdehyde dehydrogenase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal L-aminoadipate-semialdehyde dehydrogenase activity","termid":"FYPO:0001674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"decreased L-aminoadipate-semialdehyde dehydrogenase activity","synonyms":[{"name":"decreased alpha-aminoadipate reductase activity","type":"exact"},{"name":"reduced L-aminoadipate-semialdehyde dehydrogenase activity","type":"exact"},{"name":"reduced alpha-aminoadipate reductase activity","type":"exact"}],"termid":"FYPO:0002725"}


id: GO:0045561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of TRAIL (TNF-related apoptosis inducing ligand) receptor 1.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of TRAIL receptor 1 biosynthetic process (obsolete GO:0045561)","synonyms":[{"name":"regulation of TRAIL receptor 1 anabolism","type":"exact"},{"name":"regulation of TRAIL receptor 1 biosynthesis","type":"exact"},{"name":"regulation of TRAIL receptor 1 formation","type":"exact"},{"name":"regulation of TRAIL receptor 1 synthesis","type":"exact"}],"termid":"GO:0045561"}


id: PBO:0076801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tektin 2","termid":"PBO:0076801"}


id: PBO:0068399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 216 pseudogene 1","termid":"PBO:0068399"}


id: GO:0070489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adhesion of one T cell to one or more other T cells via adhesion molecules.","definition_xrefs":["PMID:12972508","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte aggregation","termid":"GO:0071593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"T cell aggregation","synonyms":[{"name":"T lymphocyte aggregation","type":"exact"},{"name":"T-cell aggregation","type":"exact"},{"name":"T-lymphocyte aggregation","type":"exact"}],"termid":"GO:0070489"}


id: PBO:0080137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vasohibin 1","termid":"PBO:0080137"}


id: PBO:0060795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit S5 pseudogene 1","termid":"PBO:0060795"}


id: GO:0090487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of secondary metabolites, the compounds that are not necessarily required for growth and maintenance of cells, and are often unique to a taxon.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"secondary metabolite catabolic process","synonyms":[{"name":"secondary metabolite breakdown","type":"exact"},{"name":"secondary metabolite catabolism","type":"exact"},{"name":"secondary metabolite degradation","type":"exact"}],"termid":"GO:0090487"}


id: PATO:0001038
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001038 ratio (obsolete PATO:0001038)","termid":"PATO:0001038"}


id: PR:O00087
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dihydrolipoyl dehydrogenase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00743","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoyl dehydrogenase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.09c","secondary_identifiers":["UniProtKB:O00087"],"synonyms":[{"name":"DLDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-DLD","type":"exact"},{"name":"dihydrolipoamide dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O00087"}


id: PR:Q96VG0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16G5.19 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q96VG0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16G5.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.19","synonyms":[{"name":"Spom972h-SPBC16G5.19","type":"exact"}],"termid":"PR:Q96VG0"}


id: GO:0052115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism in the environment of its host organism in response to physical parameters involved in energy generation, such as light, oxygen, and oxidizable substrates. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete energy taxis in host environment (obsolete GO:0052115)","synonyms":[{"name":"energy taxis in response to host environment","type":"exact"}],"termid":"GO:0052115"}


id: PATO:0002220
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a protein or a molecule by virtue of the bearer's having a phosphate (PO4) group.","definition_xrefs":["wikipedia:en.wikipedia.org/wiki/Phosphorylated"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylation","termid":"PATO:0002262"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylated","termid":"PATO:0002220"}


id: PBO:0011466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inheritance GTPase, tubulin-like (predicted)","termid":"PBO:0011466"}


id: GO:0051463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of cortisol from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cortisol secretion","termid":"GO:0051462"},{"relation_name":"is_a","term_name":"negative regulation of glucocorticoid secretion","termid":"GO:2000850"},{"relation_name":"negatively_regulates","term_name":"cortisol secretion","termid":"GO:0043400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"negative regulation of cortisol secretion","synonyms":[{"name":"down regulation of cortisol secretion","type":"exact"},{"name":"down-regulation of cortisol secretion","type":"exact"},{"name":"downregulation of cortisol secretion","type":"exact"},{"name":"inhibition of cortisol secretion","type":"narrow"}],"termid":"GO:0051463"}


id: GO:0070194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled breakdown of a synaptonemal complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"},{"relation_name":"is_a","term_name":"synaptonemal complex organization","termid":"GO:0070193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"synaptonemal complex disassembly","termid":"GO:0070194"}


id: PBO:0029482
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_elongated_vegetative_cell_population_(obsolete_FYPO:0002233)","termid":"PBO:0029482"}


id: GO:0031837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a substance K receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurokinin receptor binding","termid":"GO:0031834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"substance K receptor binding","synonyms":[{"name":"neurokinin-A receptor binding","type":"exact"},{"name":"substance K receptor ligand","type":"narrow"}],"termid":"GO:0031837"}


id: GO:0070028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involving carbon monoxide that modulates the frequency, rate or extent of transcription.","definition_xrefs":["GOC:ecd"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription by carbon monoxide (obsolete GO:0070028)","synonyms":[{"name":"regulation of transcription by CO","type":"exact"}],"termid":"GO:0070028"}


id: PBO:0038694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTB pseudogene 6","termid":"PBO:0038694"}


id: PBO:0026859
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_in_anaphase-promoting_complex","termid":"PBO:0026859"}


id: PBO:0082920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytochrome c, isoform 1; also known as iso-1-cytochrome c; electron carrier of mitochondrial intermembrane space that transfers electrons from ubiquinone-cytochrome c oxidoreductase to cytochrome c oxidase during cellular respiration; CYC1 has a paralog, CYC7, that arose from the whole genome duplication; human homolog CYC1 can complement yeast null mutant; mutations in human CYC1 cause insulin-responsive hyperglycemia","termid":"PBO:0082920"}


id: FYPO:0004047
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains two nuclei and pieces of a septum that does not completely bisect the cell.","definition_xrefs":["PomBase:mah","PMID:21931816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binucleate vegetative cell","termid":"FYPO:0001222"},{"relation_name":"is_a","term_name":"fragmented septum","termid":"FYPO:0004042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000032","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"binucleate vegetative cell with fragmented septum","synonyms":[{"name":"binucleate cells with fragmented septum during vegetative growth","type":"exact"},{"name":"binucleate vegetative cell with fragmented septum during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004047"}


id: GO:0030444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete microtubule depolymerization during nuclear congression (obsolete GO:0030444)","synonyms":[{"name":"microtubule depolymerization during nuclear congression","type":"exact"}],"termid":"GO:0030444"}


id: PBO:0073591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine hydroxymethyltransferase 2","termid":"PBO:0073591"}


id: PBO:0086543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YCR085W is not an essential gene","termid":"PBO:0086543"}


id: PBO:0071058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 60","termid":"PBO:0071058"}


id: PR:O74447
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC16C4.02c gene.","definition_xrefs":["UniProtKB:O74447","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16C4.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.02c","synonyms":[{"name":"Spom972h-SPCC16C4.02c","type":"exact"}],"termid":"PR:O74447"}


id: PBO:0044389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily B member 6","termid":"PBO:0044389"}


id: GO:0033012
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A permanent cup-shaped structure at the cell plasma membrane in secretory cells. Following a secretory stimulus, secretory vesicles transiently dock and fuse at the base of porosomes and release intravesicular contents dictated by the turgor pressure generated from the swelling of secretory vesicles.","definition_xrefs":["PMID:16563225","PMID:15090256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"porosome","secondary_identifiers":["Wikipedia:Porosome"],"termid":"GO:0033012"}


id: PBO:0058448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5087","termid":"PBO:0058448"}


id: GO:0006016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 2-deoxyribose 1-phosphate, the phosphorylated sugar 1-phospho-2-deoxyribose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-deoxyribose 1-phosphate metabolic process","termid":"GO:0046384"},{"relation_name":"is_a","term_name":"deoxyribose phosphate biosynthetic process","termid":"GO:0046385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2-deoxyribose 1-phosphate biosynthetic process","synonyms":[{"name":"2-deoxyribose 1-phosphate anabolism","type":"exact"},{"name":"2-deoxyribose 1-phosphate biosynthesis","type":"exact"},{"name":"2-deoxyribose 1-phosphate formation","type":"exact"},{"name":"2-deoxyribose 1-phosphate synthesis","type":"exact"}],"termid":"GO:0006016"}


id: FYPO:0006947
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the cytoplasm is observed there when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm","termid":"FYPO:0004842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"protein mislocalized to cytoplasm during glucose starvation","synonyms":[{"name":"ectopic protein localization to cytoplasm during glucose starvation","type":"exact"},{"name":"protein mislocalised to cytoplasm during glucose starvation","type":"exact"},{"name":"protein mislocalized to cytoplasm during glucose depletion","type":"exact"},{"name":"protein mislocalized to cytoplasm during glucose deprivation","type":"exact"}],"termid":"FYPO:0006947"}


id: GO:0061930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of erythrocyte enucleation.","definition_xrefs":["PMID:25241935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"is_a","term_name":"regulation of cell maturation","termid":"GO:1903429"},{"relation_name":"regulates","term_name":"erythrocyte enucleation","termid":"GO:0043131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of erythrocyte enucleation","termid":"GO:0061930"}


id: MOD:00104
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to L-proline amide.","definition_xrefs":["PubMed:5760861","RESID:AA0095","PubMed:4982117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-proline amide","synonyms":[{"name":"(2S)-pyrrolidine-2-carboxamide","type":"exact"},{"name":"L-proline amide","type":"exact"},{"name":"MOD_RES Proline amide","type":"exact"},{"name":"ProN","type":"exact"},{"name":"amidated L-proline","type":"exact"},{"name":"prolinamide","type":"exact"}],"termid":"MOD:00104"}


id: GO:0015428
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete type I protein secretor activity (obsolete GO:0015428)","synonyms":[{"name":"type I protein secretor activity","type":"exact"}],"termid":"GO:0015428"}


id: PBO:0088236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane voltage-dependent anion-selective channel Por1","termid":"PBO:0088236"}


id: PBO:0090341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2A","termid":"PBO:0090341"}


id: PBO:0088713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circularly permuted 1,3-beta-glucanase","termid":"PBO:0088713"}


id: PBO:0078751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 12 homolog","termid":"PBO:0078751"}


id: PBO:0090148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin, C-terminal","termid":"PBO:0090148"}


id: PBO:0036120
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein-protein_interaction","termid":"PBO:0036120"}


id: PBO:0041340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 putative open reading frame 36","termid":"PBO:0041340"}


id: PBO:0051167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-50 (pseudogene)","termid":"PBO:0051167"}


id: PBO:0005041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sad1 interacting factor 1","termid":"PBO:0005041"}


id: PBO:0040031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARMCX5-GPRASP2 readthrough","termid":"PBO:0040031"}


id: PBO:0066897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 197","termid":"PBO:0066897"}


id: PBO:0035749
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_dimethylation_at_telomere_during_vegetative_growth","termid":"PBO:0035749"}


id: PBO:0047021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A24, pseudogene","termid":"PBO:0047021"}


id: PBO:0038285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molecular_weight","termid":"PBO:0038285"}


id: GO:0048209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or destination of vesicle-mediated transport to, from or within the Golgi apparatus.","definition_xrefs":["PMID:10219233","ISBN:0716731363","GOC:jid","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular localization","termid":"GO:0060341"},{"relation_name":"regulates","term_name":"vesicle targeting, to, from or within Golgi","termid":"GO:0048199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vesicle targeting, to, from or within Golgi","synonyms":[{"name":"regulation of Golgi vesicle targeting","type":"exact"}],"termid":"GO:0048209"}


id: FYPO:0007086
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is elongated when the cell is subject to sulfur starvation.","definition_xrefs":["PomBase:mah","PMID:28388826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable elongated vegetative cell","termid":"FYPO:0001492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"elongated vegetative cell during sulfur starvation","synonyms":[{"name":"elongated cell during sulfur starvation during vegetative growth","type":"exact"},{"name":"elongated vegetative cell during cellular response to sulfur starvation","type":"exact"},{"name":"elongated vegetative cell during sulfur starvation during mitotic cell cycle","type":"related"},{"name":"elongated vegetative cell during sulphur starvation","type":"exact"}],"termid":"FYPO:0007086"}


id: FYPO:0005347
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the nucleus has a pointed shape during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:12390246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology during vegetative growth","termid":"FYPO:0000062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002403","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"pointed nucleus during mitotic interphase","synonyms":[{"name":"pointed nucleus during interphase of mitotic cell cycle","type":"exact"},{"name":"pointed nucleus during mitotic interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0005347"}


id: PBO:0080490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VWA8 antisense RNA 1 (head to head)","termid":"PBO:0080490"}


id: PBO:0063167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAXBP1 antisense RNA 1","termid":"PBO:0063167"}


id: PBO:0085749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase; implicated in proteasome function; interacts with TORC1, Ure2 and Gdh2; overexpression leads to hypersensitivity to rapamycin and nuclear accumulation of Gln3; epitope-tagged protein localizes to the cytoplasm","termid":"PBO:0085749"}


id: _global:paralogous_to
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","direct_ancestors":[{"relation_name":"is_a","term_name":"homologous_to","termid":"_global:homologous_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paralogous_to","termid":"_global:paralogous_to"}


id: PBO:0054689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2098","termid":"PBO:0054689"}


id: PBO:0052618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRI1 homolog","termid":"PBO:0052618"}


id: FYPO:0003570
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the attachment of spindle microtubules to the kinetochore during a mitotic or meiotic nuclear division is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal attachment of spindle microtubules to kinetochore","termid":"FYPO:0003570"}


id: PBO:0053050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARP7 pseudogene 1","termid":"PBO:0053050"}


id: SO:0002244
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript which is partially duplicated due to duplication of DNA, leading to a new transcript that is only partial and likely nonfunctional.","direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_variant","termid":"SO:0001576"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partially_duplicated_transcript","synonyms":[{"name":"partially duplicated transcript","type":"exact"}],"termid":"SO:0002244"}


id: GO:1905800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intraciliary retrograde transport.","definition_xrefs":["GOC:TermGenie","PMID:27930654","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"regulation of intraciliary retrograde transport","termid":"GO:1905799"},{"relation_name":"negatively_regulates","term_name":"intraciliary retrograde transport","termid":"GO:0035721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of intraciliary retrograde transport","synonyms":[{"name":"down regulation of intraciliary retrograde transport","type":"exact"},{"name":"down regulation of intraflagellar retrograde transport","type":"exact"},{"name":"down-regulation of intraciliary retrograde transport","type":"exact"},{"name":"down-regulation of intraflagellar retrograde transport","type":"exact"},{"name":"downregulation of intraciliary retrograde transport","type":"exact"},{"name":"downregulation of intraflagellar retrograde transport","type":"exact"},{"name":"inhibition of intraciliary retrograde transport","type":"narrow"},{"name":"inhibition of intraflagellar retrograde transport","type":"narrow"},{"name":"negative regulation of intraflagellar retrograde transport","type":"exact"}],"termid":"GO:1905800"}


id: FYPO:0008260
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell surface is decreased, and the localizatiion to the endoplasmic reticulum is increased. The cell surface refers to the external part of the cell wall and/or plasma membrane.","definition_xrefs":["PMID:22848669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell surface","termid":"FYPO:0008258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to cell surface, protein mislocalized to endoplasmic reticulum","termid":"FYPO:0008260"}


id: GO:0019002
data:
  {"annotated_genes":["SJAG_04410","SJAG_00044"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84951,111756],"is_not":false,"summary":null,"term":"GO:0019002"}]},"cv_name":"molecular_function","definition":"Binding to GMP, guanosine monophosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanyl ribonucleotide binding","termid":"GO:0032561"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_04410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"GMP binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0019002","terms_by_termid":{"GO:0019002":null}}


id: PBO:0090290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Rei1","termid":"PBO:0090290"}


id: GO:0072393
data:
  {"annotated_genes":["SJAG_03116","SJAG_03062","SJAG_01546","SJAG_03835","SJAG_01613"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105658],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990734"},{"annotations":[95284,99113,92835,105079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990810"}]},"cv_name":"biological_process","definition":"Any process in which a microtubule is maintained in a specific location in a cell by attachment to a microtubule organizing center.","definition_xrefs":["PMID:19825938","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule anchoring","termid":"GO:0034453"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01546":null,"SJAG_01613":null,"SJAG_03062":null,"SJAG_03116":null,"SJAG_03835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"microtubule anchoring at microtubule organizing center","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"microtubule anchoring at MTOC","type":"exact"},{"name":"microtubule anchoring at microtubule organising centre","type":"exact"}],"termid":"GO:0072393","terms_by_termid":{"GO:1990734":null,"GO:1990810":null}}


id: PBO:0060899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuralized E3 ubiquitin protein ligase 2","termid":"PBO:0060899"}


id: PBO:0085797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; conserved among S. cerevisiae strains, not conserved in closely related Saccharomyces species; protein detected via large-scale protein-protein interaction studies and enrichment-based proteogenomics; YJL199C is not an essential gene","termid":"PBO:0085797"}


id: PBO:0073911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 16 member 2","termid":"PBO:0073911"}


id: PBO:0003035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene transporter","termid":"PBO:0003035"}


id: FYPO:0006256
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cohesin unloading is normal (i.e. indistinguishable from wild type). Cohesin unloading is the topological unlinking of a cohesin ring complex from chromatin, which negatively regulates sister chromatid cohesion.","definition_xrefs":["PomBase:mah","GO:0061781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal regulation of molecular function","termid":"FYPO:0004919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic cohesin unloading","synonyms":[{"name":"normal cohesin unloading during mitotic cell cycle","type":"exact"},{"name":"normal cohesin unloading during vegetative growth","type":"exact"}],"termid":"FYPO:0006256"}


id: PR:Q12381
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-processing factor 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11246:SF1","PRO:DNx","OMA:SCHPO03357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor prp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC6B1.07","secondary_identifiers":["UniProtKB:Q12381"],"synonyms":[{"name":"Spom972h-PRPF6","type":"exact"}],"termid":"PR:Q12381"}


id: FYECO:0000138
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing glycerol as the sole carbon source, yeast extract and other components. The concentration of glycerol is typically around 2-3% and supplemented with trace amounts of another carbon source (e.g. glucose).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol YE","secondary_identifiers":["FYECO:0000083"],"synonyms":[{"name":"glycerol rich medium","type":"broad"},{"name":"glycerol sole carbon source YE","type":"related"},{"name":"glycerol sole carbon source rich medium","type":"exact"},{"name":"non-fermentable glycerol sole carbon source rich medium","type":"exact"},{"name":"nonfermentable glycerol sole carbon source rich medium","type":"related"}],"termid":"FYECO:0000138"}


id: FYPO:0004707
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more half-mer polysomes in the cytosol than normal. A half-mer polysome is a complex consisting of an mRNA bound to a single small ribosomal subunit, followed by one or more complete bound ribosomes.","definition_xrefs":["PMID:18611858","PMID:19806183","PMID:26122634","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of macromolecular complex during vegetative growth","termid":"FYPO:0003684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cytosolic half-mer polysome level","synonyms":[{"name":"cytosolic half-mer polysomes present at increased level","type":"exact"},{"name":"increased cytosolic half-mer polysome level during mitotic cell cycle","type":"related"},{"name":"increased cytosolic half-mer polysome level during vegetative growth","type":"exact"},{"name":"increased cytosolic halfmer polysome level","type":"exact"},{"name":"increased level of cytosolic half-mer polysomes","type":"related"}],"termid":"FYPO:0004707"}


id: PBO:0015263
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RDRC and RITS complexes associate together, and with noncoding centromeric RNA in a Dcr1 (hence siRNA) and Clr4 dependent manner","termid":"PBO:0015263"}


id: PBO:0028953
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-T-shaped_cell_during_recovery_from_stationary_phase","termid":"PBO:0028953"}


id: PBO:0055061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2477","termid":"PBO:0055061"}


id: PBO:0073137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC22 homolog A, vesicle trafficking protein","termid":"PBO:0073137"}


id: PBO:0043557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type IV alpha 6 chain","termid":"PBO:0043557"}


id: PBO:0031058
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_spores_and_divided_germinated_spores_(obsolete_FYPO:0000319)","termid":"PBO:0031058"}


id: PBO:0068226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 533","termid":"PBO:0068226"}


id: PBO:0001110
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukoencephalopathy","termid":"PBO:0001110"}


id: PBO:0052896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 10-7","termid":"PBO:0052896"}


id: PBO:0045400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA3 pseudogene 2","termid":"PBO:0045400"}


id: FYPO:0006649
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which 5'-3' DNA/RNA helicase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal 5'-3' DNA/RNA helicase activity","termid":"FYPO:0006647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abolished 5'-3' DNA/RNA helicase activity","synonyms":[{"name":"5'-3' DNA/RNA helicase activity abolished","type":"exact"}],"termid":"FYPO:0006649"}


id: PBO:0030333
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_phosphoinositide_level","termid":"PBO:0030333"}


id: PBO:0039447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and kinase domain containing 1","termid":"PBO:0039447"}


id: GO:0015492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: phenylalanine(out) + H+(out) = phenylalanine(in) + H+(in).","definition_xrefs":["TC:2.A.3.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:proton symporter activity","termid":"GO:0005280"},{"relation_name":"is_a","term_name":"aromatic amino acid:proton symporter activity","termid":"GO:0015494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"phenylalanine:proton symporter activity","synonyms":[{"name":"phenylalanine:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015492"}


id: GO:0051549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of keratinocyte migration.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell migration","termid":"GO:0010634"},{"relation_name":"is_a","term_name":"regulation of keratinocyte migration","termid":"GO:0051547"},{"relation_name":"positively_regulates","term_name":"keratinocyte migration","termid":"GO:0051546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of keratinocyte migration","synonyms":[{"name":"activation of keratinocyte migration","type":"narrow"},{"name":"stimulation of keratinocyte migration","type":"narrow"},{"name":"up regulation of keratinocyte migration","type":"exact"},{"name":"up-regulation of keratinocyte migration","type":"exact"},{"name":"upregulation of keratinocyte migration","type":"exact"}],"termid":"GO:0051549"}


id: GO:0061311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand the binding to its receptor on the surface of a cell, which contributes to the progression of the heart over time.","definition_xrefs":["GOC:dph","GOC:mtg_heart","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cell surface receptor signaling pathway involved in heart development","synonyms":[{"name":"cell surface receptor linked signaling pathway involved in heart development","type":"exact"},{"name":"cell surface receptor linked signalling pathway involved in heart development","type":"exact"}],"termid":"GO:0061311"}


id: FYPO:0002521
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population undergoes conjugation with wild type h- cells.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased conjugation frequency","termid":"FYPO:0000303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"decreased frequency of conjugation with h- cells","synonyms":[{"name":"decreased conjugation with WT h- cells","type":"exact"},{"name":"decreased frequency of conjugation with h minus cells","type":"exact"},{"name":"decreased frequency of mating with h- cells","type":"exact"},{"name":"reduced frequency of conjugation with h- cells","type":"exact"}],"termid":"FYPO:0002521"}


id: FYPO:0007274
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitochondrion inheritance is abnormal. Mitochondrion inheritance is a cellular process that results in the distribution of mitochondria into daughter cells after mitosis or meiosis, mediated by interactions between mitochondria and the cytoskeleton.","definition_xrefs":["GO:0000001","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization phenotype","termid":"FYPO:0000138"},{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitochondrion inheritance","synonyms":[{"name":"abnormal mitochondrial inheritance","type":"exact"}],"termid":"FYPO:0007274"}


id: GO:0005683
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains the U7 snRNA and is required for the 3'-end processing of replication-dependent histone pre-mRNAs.","definition_xrefs":["PMID:12872004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small nuclear ribonucleoprotein complex","termid":"GO:0030532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"U7 snRNP","synonyms":[{"name":"snRNP U7","type":"exact"}],"termid":"GO:0005683"}


id: PBO:0028342
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_post-anaphase_array_morphology","termid":"PBO:0028342"}


id: GO:0009341
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses beta-galactosidase activity, i.e. catalyzes the hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. In E. coli, the complex is a homotetramer; dimeric and hexameric beta-galactosidase complexes have been observed in other species.","definition_xrefs":["PMID:15950161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"beta-galactosidase complex","termid":"GO:0009341"}


id: PBO:0111646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative cofactor 2 complex subunit Bur6","termid":"PBO:0111646"}


id: GO:1900551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of N',N'',N'''-triacetylfusarinine C.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"N',N'',N'''-triacetylfusarinine C metabolic process","termid":"GO:1900549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"N',N'',N'''-triacetylfusarinine C biosynthetic process","synonyms":[{"name":"N',N'',N'''-triacetylfusarinine C anabolism","type":"exact"},{"name":"N',N'',N'''-triacetylfusarinine C biosynthesis","type":"exact"},{"name":"N',N'',N'''-triacetylfusarinine C formation","type":"exact"},{"name":"N',N'',N'''-triacetylfusarinine C synthesis","type":"exact"}],"termid":"GO:1900551"}


id: PBO:0059812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 38","termid":"PBO:0059812"}


id: GO:0018296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-FAD linkage via O4'-(8-alpha-FAD)-L-tyrosine.","definition_xrefs":["RESID:AA0145"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-FAD linkage via O4'-(8alpha-FAD)-L-tyrosine (obsolete GO:0018296)","termid":"GO:0018296"}


id: FYPO:0002898
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to a DNA damage stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0001320","FYPO:0002274","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein phosphorylation during cellular response to DNA damage","synonyms":[{"name":"abolished protein phosphorylation during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"protein phosphorylation abolished during cellular response to DNA damage","type":"exact"}],"termid":"FYPO:0002898"}


id: GO:0005894
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds interleukin-3; comprises an alpha and a beta subunit. The alpha chain is specific to the interleukin-3 receptor, whereas the beta chain is shared with the receptors for granulocyte-macrophage colony-stimulating factor and interleukin-5.","definition_xrefs":["PMID:11839579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"interleukin-3 receptor complex","synonyms":[{"name":"IL-3 receptor complex","type":"exact"}],"termid":"GO:0005894"}


id: FYPO:0004447
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is not normally found in the prospore membrane is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein","termid":"FYPO:0003452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"protein mislocalized to prospore membrane","synonyms":[{"name":"protein mislocalised to prospore membrane","type":"exact"},{"name":"protein mislocalized to forespore membrane","type":"exact"}],"termid":"FYPO:0004447"}


id: PBO:0086674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology comparisons and RT-PCR; this ORF is contained within RDN25-2 and RDN37-2","termid":"PBO:0086674"}


id: GO:0015020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside.","definition_xrefs":["RHEA:21032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"glucuronosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-174931","GO:0003981","EC:2.4.1.17","MetaCyc:UDP-GLUCURONOSYLTRANSFERASE-RXN","Reactome:R-HSA-9756134","Reactome:R-HSA-9758661","Reactome:R-HSA-5604954","Reactome:R-HSA-159179","Reactome:R-HSA-9036102","Reactome:R-HSA-5604975","Reactome:R-HSA-9036104","Reactome:R-HSA-159194","Reactome:R-HSA-9638097","Reactome:R-HSA-5617143","Reactome:R-HSA-2162099","Reactome:R-HSA-9749977","Reactome:R-HSA-9632038","Reactome:R-HSA-174916","Reactome:R-HSA-9756156","Reactome:R-HSA-9632039","Reactome:R-HSA-8941701","Reactome:R-HSA-9756183","Reactome:R-HSA-158546"],"synonyms":[{"name":"1-naphthol glucuronyltransferase activity","type":"narrow"},{"name":"1-naphthol-UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"17-OH steroid UDPGT activity","type":"narrow"},{"name":"17-beta-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"17beta-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"3-OH androgenic UDPGT activity","type":"narrow"},{"name":"3-alpha-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"3alpha-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"4-hydroxybiphenyl UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"4-methylumbelliferone UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"4-nitrophenol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"4-nitrophenol UDPGT activity","type":"narrow"},{"name":"GT activity","type":"related"},{"name":"PNP-UDPGT","type":"related"},{"name":"UDP glucuronate-estradiol-glucuronosyltransferase activity","type":"narrow"},{"name":"UDP glucuronate-estriol glucuronosyltransferase activity","type":"narrow"},{"name":"UDP glucuronic acid transferase activity","type":"related"},{"name":"UDP glucuronosyltransferase activity","type":"related"},{"name":"UDP glucuronyltransferase activity","type":"related"},{"name":"UDP-glucuronate beta-D-glucuronosyltransferase (acceptor-unspecific)","type":"related"},{"name":"UDP-glucuronate-4-hydroxybiphenyl glucuronosyltransferase activity","type":"narrow"},{"name":"UDP-glucuronate-bilirubin glucuronyltransferase activity","type":"narrow"},{"name":"UDP-glucuronosyltransferase activity","type":"related"},{"name":"UDP-glucuronyltransferase activity","type":"related"},{"name":"UDPGA transferase activity","type":"related"},{"name":"UDPGA-glucuronyltransferase activity","type":"related"},{"name":"UDPGT activity","type":"related"},{"name":"UDPglucuronate beta-D-glucuronosyltransferase (acceptor-unspecific) activity","type":"narrow"},{"name":"bilirubin UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"bilirubin UDPGT activity","type":"narrow"},{"name":"bilirubin glucuronyltransferase activity","type":"narrow"},{"name":"bilirubin monoglucuronide glucuronyltransferase activity","type":"narrow"},{"name":"bilirubin uridine diphosphoglucuronyltransferase activity","type":"narrow"},{"name":"ciramadol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"estriol UDPglucuronosyltransferase activity","type":"narrow"},{"name":"estrone UDPglucuronosyltransferase activity","type":"narrow"},{"name":"morphine glucuronyltransferase activity","type":"narrow"},{"name":"p-hydroxybiphenyl UDP glucuronyltransferase activity","type":"narrow"},{"name":"p-nitrophenol UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"p-nitrophenol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"p-nitrophenylglucuronosyltransferase activity","type":"narrow"},{"name":"p-phenylphenol glucuronyltransferase activity","type":"narrow"},{"name":"phenyl-UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"pnp-UDPGT activity","type":"narrow"},{"name":"uridine 5'-diphosphoglucuronyltransferase activity","type":"related"},{"name":"uridine diphosphate glucuronyltransferase activity","type":"related"},{"name":"uridine diphosphoglucuronate-1,2-diacylglycerol glucuronosyltransferase activity","type":"narrow"},{"name":"uridine diphosphoglucuronate-4-hydroxybiphenyl glucuronosyltransferase activity","type":"narrow"},{"name":"uridine diphosphoglucuronate-bilirubin glucuronoside glucuronosyltransferase activity","type":"narrow"},{"name":"uridine diphosphoglucuronate-bilirubin glucuronosyltransferase activity","type":"narrow"},{"name":"uridine diphosphoglucuronate-estradiol glucuronosyltransferase activity","type":"narrow"},{"name":"uridine diphosphoglucuronate-estriol 16-alpha-glucuronosyltransferase activity","type":"narrow"},{"name":"uridine diphosphoglucuronate-estriol 16alpha-glucuronosyltransferase activity","type":"narrow"},{"name":"uridine diphosphoglucuronate-estriol glucuronosyltransferase activity","type":"narrow"},{"name":"uridine diphosphoglucuronosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucuronyltransferase activity","type":"related"}],"termid":"GO:0015020"}


id: GO:0015949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which a nucleobase, nucleoside or nucleotide small molecule is synthesized from another nucleobase, nucleoside or nucleotide small molecule.","definition_xrefs":["ISBN:0306444747","ISBN:0471394831","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing small molecule metabolic process","termid":"GO:0055086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"nucleobase-containing small molecule interconversion","termid":"GO:0015949"}


id: GO:0141169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An epigenetic cytosine DNA demethylation pathway that involves a DNA glycosylase that directly excises 5-methylcytosine (5-meC) to initiate its replacement with unmethylated cytosine through base excision repair. This pathway is known to occur in plants. In addition to CG sites, plants also methylate cytosines within CHH and CNG sequences.","definition_xrefs":["PMID:36478523","PMID:31546611","PMID:21862972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal 5-methylcytosine DNA demethylation pathway","termid":"GO:0141166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"chromosomal 5-methylcytosine DNA demethylation, direct 5-methylcytosine excision pathway","synonyms":[{"name":"epigenetic 5-methylcytosine DNA demethylation, direct 5-methylcytosine excision pathway","type":"related"}],"termid":"GO:0141169"}


id: GO:0018204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-leucine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-leucine modification","termid":"GO:0018204"}


id: PR:Q09780
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mevalonate kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10457:SF4","OMA:SCHPO00072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mevalonate kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.11c","secondary_identifiers":["UniProtKB:Q09780"],"synonyms":[{"name":"MK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MVK","type":"exact"}],"termid":"PR:Q09780"}


id: PBO:0057808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3130-1","termid":"PBO:0057808"}


id: PBO:0076171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family, cytosolic, 1C, member 2 pseudogene 2","termid":"PBO:0076171"}


id: GO:0061423
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter resulting in the increased frequency, rate or extent of the directed movement of sodium ions (Na+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:dph","PMID:11523797"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of sodium ion transport by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0061423)","termid":"GO:0061423"}


id: GO:0050746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving lipoproteins, any conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"regulates","term_name":"lipoprotein metabolic process","termid":"GO:0042157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lipoprotein metabolic process","synonyms":[{"name":"regulation of lipoprotein metabolism","type":"exact"}],"termid":"GO:0050746"}


id: PBO:0057569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 764","termid":"PBO:0057569"}


id: MOD:00522
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["RESID:AA0151#var","Unimod:154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"Hex3HexNAc1Pent1 N4-glycosylated asparagine","synonyms":[{"name":"Hex(3)HexNAc(1)Pent(1)","type":"related"},{"name":"Hex3HexNAc1Pent1","type":"related"}],"termid":"MOD:00522"}


id: PBO:0109362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 1B","termid":"PBO:0109362"}


id: FYPO:0001444
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"increased cellular trehalose level","termid":"FYPO:0002685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular trehalose level during vegetative growth","synonyms":[{"name":"increased cellular trehalose level during mitotic cell cycle","type":"related"},{"name":"increased trehalose accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0001444"}


id: PBO:0059846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase","termid":"PBO:0059846"}


id: PBO:0049918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEY2 antisense RNA 1","termid":"PBO:0049918"}


id: GO:1902560
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An oxidoreductase complex which is capable of GMP reductase activity. It catalyses the irreversible reaction: GMP + 2 H+ + NADPH => IMP + NADP+ + NH4.","definition_xrefs":["PMID:12009299","GOC:TermGenie","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"GMP reductase complex","synonyms":[{"name":"GMP reductase","type":"narrow"},{"name":"GMPR1 complex","type":"narrow"},{"name":"GMPR2 complex","type":"narrow"},{"name":"guanosine monophosphate reductase","type":"narrow"}],"termid":"GO:1902560"}


id: PBO:0034319
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-represses_expression_of","termid":"PBO:0034319"}


id: PBO:0084953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multistep regulator of cAMP-PKA signaling; inhibits PKA downstream of Gpa2p and Cyr1p, thereby increasing cAMP dependency; promotes ubiquitin-dependent proteolysis of Ira2p; regulated by G-alpha protein Gpa2p; GPB1 has a paralog, GPB2, that arose from the whole genome duplication","termid":"PBO:0084953"}


id: GO:0032724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of fractalkine production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fractalkine production","termid":"GO:0032644"},{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"positively_regulates","term_name":"fractalkine production","termid":"GO:0032603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of fractalkine production","synonyms":[{"name":"activation of fractalkine production","type":"narrow"},{"name":"stimulation of fractalkine production","type":"narrow"},{"name":"up regulation of fractalkine production","type":"exact"},{"name":"up-regulation of fractalkine production","type":"exact"},{"name":"upregulation of fractalkine production","type":"exact"}],"termid":"GO:0032724"}


id: PBO:0075415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermadhesin family member","termid":"PBO:0075415"}


id: PBO:0114424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary microtubule inner protein 6","termid":"PBO:0114424"}


id: PBO:0064154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plakophilin 4 pseudogene 1","termid":"PBO:0064154"}


id: PBO:0110384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3121","termid":"PBO:0110384"}


id: GO:0090411
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a brassinosteroid.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid binding","termid":"GO:0005496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0008289","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"brassinosteroid binding","termid":"GO:0090411"}


id: PBO:0068233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 18S ribosomal 4","termid":"PBO:0068233"}


id: PBO:0074324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small ArfGAP2","termid":"PBO:0074324"}


id: PBO:0005542
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.7","termid":"PBO:0005542"}


id: PBO:0036155
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_protein_localization_to_nucleolus","termid":"PBO:0036155"}


id: PBO:0046414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPH receptor A1","termid":"PBO:0046414"}


id: PR:O94469
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A high affinity choline transporter 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03142","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urea active transporter 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23G7.13c","secondary_identifiers":["UniProtKB:O94469"],"synonyms":[{"name":"Spom972h-SLC5A7","type":"exact"}],"termid":"PR:O94469"}


id: GO:0048392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an intermediate mesoderm cell.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell differentiation","termid":"GO:0048333"},{"relation_name":"part_of","term_name":"intermediate mesoderm formation","termid":"GO:0048391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intermediate mesodermal cell differentiation","synonyms":[{"name":"intermediate mesoderm cell differentiation","type":"exact"}],"termid":"GO:0048392"}


id: PBO:0056977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 29b-1","termid":"PBO:0056977"}


id: PBO:0066507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory factor X4","termid":"PBO:0066507"}


id: PBO:0018291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit (predicted)","termid":"PBO:0018291"}


id: PBO:0027157
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_vacuolar_arginine_level","termid":"PBO:0027157"}


id: FYPO:0002964
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to  nuclear exosome foci is increased. Nuclear exosome foci, also called Mmi1 foci, are small structures that form within the nucleus, and contain proteins involved in degrading meiosis-specific RNAs during the mitotic cell cycle, such as Mmi1, Iss10, and Red1.","definition_xrefs":["PMID:23980030","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nuclear exosome focus","termid":"FYPO:0002963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased protein localization to nuclear exosome focus","synonyms":[{"name":"increased protein localisation to nuclear exosome focus","type":"exact"},{"name":"increased protein localization to Mmi1 focus","type":"exact"},{"name":"increased protein localization to Mmi1 nuclear focus","type":"exact"},{"name":"increased protein localization to nuclear exosome foci","type":"exact"},{"name":"increased protein localization to nuclear exosome focus during mitotic cell cycle","type":"related"},{"name":"increased protein localization to nuclear exosome focus during vegetative growth","type":"exact"}],"termid":"FYPO:0002964"}


id: GO:1990094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The positive regulation of the receptor clustering process in which N-methyl-D-aspartate (NMDA) receptors are localized to distinct domains in the cell membrane.","definition_xrefs":["PMID:18442977"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of N-methyl-D-aspartate receptor clustering (obsolete GO:1990094)","synonyms":[{"name":"positive regulation of N-methyl-D-aspartate receptor clustering","type":"exact"},{"name":"positive regulation of NMDA receptor clustering","type":"exact"}],"termid":"GO:1990094"}


id: PATO:0001948
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A grooved texture quality inhering in a bearer by virtue of the bearer's being marked by two or more parallel channels.","definition_xrefs":["PATOC:JE"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grooved","termid":"PATO:0002255"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"furrowed","synonyms":[{"name":"fluted","type":"related"}],"termid":"PATO:0001948"}


id: PBO:0064666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 1","termid":"PBO:0064666"}


id: PBO:0060833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD4 E3 ubiquitin protein ligase","termid":"PBO:0060833"}


id: PBO:0087252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase; inhibits pheromone induced signaling downstream of MAPK, possibly at the level of the Ste12p transcription factor","termid":"PBO:0087252"}


id: PBO:0079911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 pseudogene 1","termid":"PBO:0079911"}


id: PBO:0005252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cinnamoyl-CoA reductase pseudogene","termid":"PBO:0005252"}


id: PBO:0089068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L57","termid":"PBO:0089068"}


id: PBO:0072073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 3","termid":"PBO:0072073"}


id: GO:0075028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent symbiont appressorium initiation.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of appressorium initiation (obsolete GO:0075028)","synonyms":[{"name":"negative regulation of appressorium initiation on or near host","type":"related"},{"name":"negative regulation of initiation of appressorium on or near host","type":"exact"}],"termid":"GO:0075028"}


id: FYPO:0003629
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which spliceosomal tri-snRNP complex assembly is abolished.","definition_xrefs":["PMID:12374752","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ribonucleoprotein complex assembly","termid":"FYPO:0003628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished U2/U5/U6 snRNP complex assembly","synonyms":[{"name":"U2/U5/U6 snRNP complex assembly abolished","type":"exact"},{"name":"abolished U2/U5/U6 snRNP complex assembly during mitotic cell cycle","type":"related"},{"name":"abolished U2/U5/U6 snRNP complex assembly during vegetative growth","type":"exact"},{"name":"abolished U2/U5/U6 tri-snRNP complex assembly abolished","type":"exact"}],"termid":"FYPO:0003629"}


id: PBO:0069627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 904, pseudogene","termid":"PBO:0069627"}


id: PBO:0074261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLCO4A1 antisense RNA 2","termid":"PBO:0074261"}


id: PBO:0017985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug20","termid":"PBO:0017985"}


id: GO:0034293
data:
  {"annotated_genes":["SJAG_01531","SJAG_04184","SJAG_04483","SJAG_04901","SJAG_00971","SJAG_04275","SJAG_02241","SJAG_01321","SJAG_04271","SJAG_01483","SJAG_04922","SJAG_00405","SJAG_00993","SJAG_02248","SJAG_02712","SJAG_00663","SJAG_03013","SJAG_03688","SJAG_04238","SJAG_03090","SJAG_04853","SJAG_00114","SJAG_04859","SJAG_04781","SJAG_03536","SJAG_03483","SJAG_02736","SJAG_00974","SJAG_03250","SJAG_01769","SJAG_01662","SJAG_04236","SJAG_03915","SJAG_04470","SJAG_00486","SJAG_00821","SJAG_02320","SJAG_03557","SJAG_02529","SJAG_01017","SJAG_04140","SJAG_02718","SJAG_03587","SJAG_03057","SJAG_04080","SJAG_04010","SJAG_04868","SJAG_04615","SJAG_03746","SJAG_05309","SJAG_02169","SJAG_00826"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107374],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0072316"},{"annotations":[92585,92935,107570,109996,91430,93003,103772,106167,108767,114595,101166,100191,96784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030437"},{"annotations":[107375],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071998"},{"annotations":[90522],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[84772,86310,84282,113848,87818],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[105350],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[113858,100234,105126,110145,113849],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070591"},{"annotations":[87549,106168,101017,105351,93649],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031321"},{"annotations":[101333,114596,94885,97767,114894,95891,115078,95890,103437,93609,87342,93650,109997,95960,106169,113002,91431],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032120"},{"annotations":[92936,102879,98982,93610,103773,95892,109998,88339,95893,100192],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031322"},{"annotations":[90080,107376],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0072000"},{"annotations":[107258],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0075297"},{"annotations":[98352],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0075296"},{"annotations":[86787],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[88234],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0034307"},{"annotations":[96178,112038,90563,95894,95895,102056],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"The formation of spores derived from the products of meiosis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"sporulation","termid":"GO:0043934"},{"relation_name":"part_of","term_name":"meiotic cell cycle","termid":"GO:0051321"}],"gene_count":52,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00405":null,"SJAG_00486":null,"SJAG_00663":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_00974":null,"SJAG_00993":null,"SJAG_01017":null,"SJAG_01321":null,"SJAG_01483":null,"SJAG_01531":null,"SJAG_01662":null,"SJAG_01769":null,"SJAG_02169":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02529":null,"SJAG_02712":null,"SJAG_02718":null,"SJAG_02736":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03090":null,"SJAG_03250":null,"SJAG_03483":null,"SJAG_03536":null,"SJAG_03557":null,"SJAG_03587":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04140":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04271":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04483":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04853":null,"SJAG_04859":null,"SJAG_04868":null,"SJAG_04901":null,"SJAG_04922":null,"SJAG_05309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"sexual sporulation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"meiotic spore formation","type":"exact"},{"name":"meiotic sporulation","type":"exact"},{"name":"sexual spore formation","type":"exact"}],"termid":"GO:0034293","terms_by_termid":{"GO:0030437":null,"GO:0030476":null,"GO:0031321":null,"GO:0031322":null,"GO:0032120":null,"GO:0034307":null,"GO:0034412":null,"GO:0034413":null,"GO:0070583":null,"GO:0070591":null,"GO:0071998":null,"GO:0072000":null,"GO:0072316":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null}}


id: PBO:0038529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 3, phospholipase","termid":"PBO:0038529"}


id: GO:0007338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The union of male and female gametes to form a zygote.","definition_xrefs":["GOC:mtg_sensu","GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fertilization","termid":"GO:0009566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"single fertilization","synonyms":[{"name":"zygote biosynthesis","type":"related"},{"name":"zygote formation","type":"related"}],"termid":"GO:0007338"}


id: FYPO:0003692
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular response to oxidative stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0000002","FYPO:0002274","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased protein phosphorylation during cellular response to oxidative stress","synonyms":[{"name":"increased protein phosphorylation during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"increased protein phosphorylation during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"increased protein phosphorylation during oxidative stress response","type":"exact"}],"termid":"FYPO:0003692"}


id: GO:0035656
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The activity of linking kinesins, cytoplasmic proteins responsible for moving vesicles and organelles towards the distal end of microtubules, to melanosomes.","definition_xrefs":["PMID:19841138"],"gene_count":0,"genotype_count":0,"name":"obsolete kinesin-associated melanosomal adaptor activity (obsolete GO:0035656)","synonyms":[{"name":"kinesin-melanosome adaptor activity","type":"exact"}],"termid":"GO:0035656"}


id: PBO:0005877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase 1 (predicted)","termid":"PBO:0005877"}


id: PR:O13917
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hpt1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxanthine-guanine phosphoribosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.13c","synonyms":[{"name":"HGPRT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"HGPRTase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-hpt1","type":"exact"}],"termid":"PR:O13917"}


id: PBO:0044470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 8 subfamily B member 1","termid":"PBO:0044470"}


id: PBO:0046198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin A3 family member B, pseudogene","termid":"PBO:0046198"}


id: PBO:0113564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex beta subunit, Wbp1","termid":"PBO:0113564"}


id: GO:0002617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of macrophage antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation","termid":"GO:0002578"},{"relation_name":"is_a","term_name":"regulation of macrophage antigen processing and presentation","termid":"GO:0002616"},{"relation_name":"negatively_regulates","term_name":"macrophage antigen processing and presentation","termid":"GO:0002472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of macrophage antigen processing and presentation","synonyms":[{"name":"down regulation of macrophage antigen processing and presentation","type":"exact"},{"name":"down-regulation of macrophage antigen processing and presentation","type":"exact"},{"name":"downregulation of macrophage antigen processing and presentation","type":"exact"},{"name":"inhibition of macrophage antigen processing and presentation","type":"narrow"}],"termid":"GO:0002617"}


id: PBO:0029888
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_stress_granule_assembly","termid":"PBO:0029888"}


id: PBO:0040520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-2-glycoprotein 1, zinc-binding","termid":"PBO:0040520"}


id: PBO:0045189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJB6 pseudogene 2","termid":"PBO:0045189"}


id: PBO:0090169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface protein involved in ascospore wall assembly, GPI anchored Meu10","termid":"PBO:0090169"}


id: PBO:0054560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1962","termid":"PBO:0054560"}


id: PBO:0074353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes 2","termid":"PBO:0074353"}


id: GO:0032500
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacting selectively and non-covalently, in a non-covalent manner, with muramyl dipeptide; muramyl dipeptide is derived from peptidoglycan.","definition_xrefs":["GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"muramyl dipeptide binding","termid":"GO:0032500"}


id: GO:0019845
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The function of a toxin formed by a microorganism and secreted into the surrounding medium.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete exotoxin activity (obsolete GO:0019845)","synonyms":[{"name":"exotoxin activity","type":"exact"}],"termid":"GO:0019845"}


id: GO:0001565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a phorbol ester and transmitting the signal to initiate a change in cell activity.","definition_xrefs":["PMID:10506570","GOC:ai","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"phorbol ester receptor activity","termid":"GO:0001565"}


id: _global:singly_occurring_form_of
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"singly_occurring_form_of","synonyms":[{"name":"monadic_form_of","type":"exact"}],"termid":"_global:singly_occurring_form_of"}


id: PBO:0001053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine-phosphate dipyrophosphorylase/hydroxyethylthiazole kinase","termid":"PBO:0001053"}


id: GO:0048383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mesectoderm over time, from its formation to the mature structure. In animal embryos, mesectoderm development processes give rise to both mesoderm and ectoderm tissues.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"},{"relation_name":"part_of","term_name":"ectoderm development","termid":"GO:0007398"},{"relation_name":"part_of","term_name":"mesoderm development","termid":"GO:0007498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesectoderm development","termid":"GO:0048383"}


id: GO:1901944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving miltiradiene.","definition_xrefs":["PMID:22027823","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene metabolic process","termid":"GO:0042214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"miltiradiene metabolic process","synonyms":[{"name":"miltiradiene metabolism","type":"exact"}],"termid":"GO:1901944"}


id: PBO:0012307
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in yeast","termid":"PBO:0012307"}


id: SO:0000991
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA located in the genome and able to be transmitted to the offspring.","definition_xrefs":["BCS:etrwz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA","termid":"SO:0000352"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genomic_DNA","synonyms":[{"name":"gDNA","type":"exact"},{"name":"genomic DNA","type":"exact"}],"termid":"SO:0000991"}


id: PBO:0035825
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_ubiquitination_during_vegetative_growth","termid":"PBO:0035825"}


id: FYPO:0001460
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a calcineurin-dependent response element (CDRE)-containing promoter is increased following a calcium ion stimulus.","definition_xrefs":["PMID:21811607","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0000294","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased transcription from CDRE promoter in response to calcium ion","synonyms":[{"name":"increased transcription from CDRE promoter in response to calcium ion during mitotic cell cycle","type":"related"},{"name":"increased transcription from CDRE promoter in response to calcium ion during vegetative growth","type":"exact"}],"termid":"FYPO:0001460"}


id: GO:0047484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of the response to osmotic stress.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stress","termid":"GO:0080134"},{"relation_name":"regulates","term_name":"response to osmotic stress","termid":"GO:0006970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to osmotic stress","termid":"GO:0047484"}


id: PBO:0025419
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metabolic disorders","termid":"PBO:0025419"}


id: GO:0050964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events that contribute to electroception in which an electrical stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:ai","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of electrical stimulus involved in sensory perception","termid":"GO:0050963"},{"relation_name":"part_of","term_name":"electroception","termid":"GO:0050956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of electrical stimulus involved in electroception","synonyms":[{"name":"detection of electrical stimulus during electroreception","type":"related"},{"name":"electroception, detection of electrical stimulus","type":"exact"},{"name":"electroception, sensory detection of electrical stimulus","type":"exact"},{"name":"electroception, sensory transduction","type":"exact"},{"name":"electroception, sensory transduction of electrical stimulus","type":"exact"},{"name":"sensory detection of electrical stimulus during electroception","type":"related"},{"name":"sensory transduction of electrical stimulus during electroception","type":"related"}],"termid":"GO:0050964"}


id: GO:0030543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which copies of the 2-micrometer plasmid, found in fungi such as Saccharomyces, are distributed to daughter cells upon cell division.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasmid partitioning","termid":"GO:0030541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2-micrometer plasmid partitioning","termid":"GO:0030543"}


id: GO:0042194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of quinate, the anion of quinic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quinate metabolic process","termid":"GO:0019630"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"quinate biosynthetic process","synonyms":[{"name":"quinate anabolism","type":"exact"},{"name":"quinate biosynthesis","type":"exact"},{"name":"quinate formation","type":"exact"},{"name":"quinate synthesis","type":"exact"},{"name":"quinic acid biosynthesis","type":"exact"},{"name":"quinic acid biosynthetic process","type":"exact"}],"termid":"GO:0042194"}


id: GO:0070399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of wall teichoic acid, which is a major component of the cell wall of Gram-positive bacteria and typically consists of a polymer of glycerol-phosphate or ribitol-phosphate to which are attached glycosyl and D-alanyl ester residues and which is covalently linked to peptidoglycan.","definition_xrefs":["GOC:add","PMID:14665680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"wall teichoic acid metabolic process","termid":"GO:0070397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wall teichoic acid catabolic process","synonyms":[{"name":"wall teichoic acid breakdown","type":"exact"},{"name":"wall teichoic acid catabolism","type":"exact"},{"name":"wall teichoic acid degradation","type":"exact"}],"termid":"GO:0070399"}


id: GO:0040040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Behavior that is dependent upon the sensation of temperature.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"},{"relation_name":"is_a","term_name":"response to temperature stimulus","termid":"GO:0009266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thermosensory behavior","synonyms":[{"name":"behavioral response to temperature stimulus","type":"exact"},{"name":"behavioural response to temperature stimulus","type":"exact"},{"name":"thermosensory behaviour","type":"exact"}],"termid":"GO:0040040"}


id: SO:0002269
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"R2 retrotransposons are LINE elements (SO:0000194) that insert site-specifically into the host organism's 28S ribosomal RNA (rRNA) genes.","definition_xrefs":["PMID:21734471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LINE_element","termid":"SO:0000194"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R2_LINE_retrotransposon","synonyms":[{"name":"R2 LINE retrotransposon","type":"exact"},{"name":"R2 retrotransposon","type":"exact"},{"name":"RIR retrotransposon","type":"exact"}],"termid":"SO:0002269"}


id: GO:0010075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in maintaining the size and shape of a meristem.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"part_of","term_name":"meristem maintenance","termid":"GO:0010073"},{"relation_name":"regulates","term_name":"meristem growth","termid":"GO:0035266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of meristem growth","synonyms":[{"name":"regulation of meristem size","type":"exact"}],"termid":"GO:0010075"}


id: PBO:0081707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 627","termid":"PBO:0081707"}


id: GO:0019887
data:
  {"annotated_genes":["SJAG_01821","SJAG_00973","SJAG_00439","SJAG_00424","SJAG_03618","SJAG_03371","SJAG_00457","SJAG_01401","SJAG_02332","SJAG_02026","SJAG_03936","SJAG_01210","SJAG_01245","SJAG_01411","SJAG_02785","SJAG_00236","SJAG_03802","SJAG_01000","SJAG_01274","SJAG_04200","SJAG_00318","SJAG_03699","SJAG_02057","SJAG_01213","SJAG_03591","SJAG_02404","SJAG_04140","SJAG_04502","SJAG_00142","SJAG_00333","SJAG_04666","SJAG_03340","SJAG_00100","SJAG_02605","SJAG_01118","SJAG_04020","SJAG_04614","SJAG_01716","SJAG_01605","SJAG_03695","SJAG_05030","SJAG_03931","SJAG_01020","SJAG_05978","SJAG_03453","SJAG_04509","SJAG_03525","SJAG_02232","SJAG_05017","SJAG_00613","SJAG_03090"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93813,93940,112217,114444],"is_not":false,"summary":null,"term":"GO:0019887"},{"annotations":[96503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004862"},{"annotations":[88188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019912"},{"annotations":[113147,108146,107264,109034,101059,104928,97682,106972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061575"},{"annotations":[104946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004861"},{"annotations":[104411,100393,87795,98924,102403,102306,84288,102017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016538"},{"annotations":[105886,85284,95145,103195,106581,105885,107496,95253,114969,112395,87361,83909,113349,114970,108543,95146,114849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030295"},{"annotations":[111390,103066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004860"},{"annotations":[96046,113350,85509,87240,87193,87241,88479,85299,114431,101169,106602,83978,109035,105320,86915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043539"},{"annotations":[104461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030291"}]},"cv_name":"molecular_function","definition":"Modulates the activity of a protein kinase, an enzyme which phosphorylates a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase regulator activity","termid":"GO:0019207"}],"gene_count":51,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00142":null,"SJAG_00236":null,"SJAG_00318":null,"SJAG_00333":null,"SJAG_00424":null,"SJAG_00439":null,"SJAG_00457":null,"SJAG_00613":null,"SJAG_00973":null,"SJAG_01000":null,"SJAG_01020":null,"SJAG_01118":null,"SJAG_01210":null,"SJAG_01213":null,"SJAG_01245":null,"SJAG_01274":null,"SJAG_01401":null,"SJAG_01411":null,"SJAG_01605":null,"SJAG_01716":null,"SJAG_01821":null,"SJAG_02026":null,"SJAG_02057":null,"SJAG_02232":null,"SJAG_02332":null,"SJAG_02404":null,"SJAG_02605":null,"SJAG_02785":null,"SJAG_03090":null,"SJAG_03340":null,"SJAG_03371":null,"SJAG_03453":null,"SJAG_03525":null,"SJAG_03591":null,"SJAG_03618":null,"SJAG_03695":null,"SJAG_03699":null,"SJAG_03802":null,"SJAG_03931":null,"SJAG_03936":null,"SJAG_04020":null,"SJAG_04140":null,"SJAG_04200":null,"SJAG_04502":null,"SJAG_04509":null,"SJAG_04614":null,"SJAG_04666":null,"SJAG_05017":null,"SJAG_05030":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0003674"],"is_obsolete":false,"name":"protein kinase regulator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0019887","terms_by_termid":{"GO:0004860":null,"GO:0004861":null,"GO:0004862":null,"GO:0016538":null,"GO:0019887":null,"GO:0019912":null,"GO:0030291":null,"GO:0030295":null,"GO:0043539":null,"GO:0061575":null}}


id: GO:0001407
data:
  {"annotated_genes":["SJAG_03644","SJAG_00232","SJAG_05325"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98652,98653,98654],"is_not":false,"summary":null,"term":"GO:0001407"}]},"cv_name":"biological_process","definition":"The process in which a glycerophosphodiester is transported across a membrane. Glycerophosphodiesters are small molecules composed of glycerol-3-phosphate and an alcohol, for example, glycerophosphoinositol.","definition_xrefs":["GOC:mcc","PMID:12912892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"organophosphate ester transport","termid":"GO:0015748"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00232":null,"SJAG_03644":null,"SJAG_05325":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"glycerophosphodiester transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0001407","terms_by_termid":{"GO:0001407":null}}


id: GO:1905709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the passage or uptake of molecules by a membrane.","definition_xrefs":["PMID:27482894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane permeability","termid":"GO:0090559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of membrane permeability","termid":"GO:1905709"}


id: PBO:0057256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 483","termid":"PBO:0057256"}


id: PBO:0067047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 67, pseudogene","termid":"PBO:0067047"}


id: PBO:0085437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Poly(A+) RNA-binding protein; key surveillance factor for the selective export of spliced mRNAs from the nucleus to the cytoplasm; preference for intron-containing genes; similar to Npl3p; also binds single-stranded telomeric repeat sequence in vitro; relocalizes to the cytosol in response to hypoxia; GBP2 has a paralog, HRB1, that arose from the whole genome duplication","termid":"PBO:0085437"}


id: PBO:0062002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily H member 1","termid":"PBO:0062002"}


id: PBO:0005659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MutS protein homolog","termid":"PBO:0005659"}


id: PBO:0061843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Opa interacting protein 5","termid":"PBO:0061843"}


id: PBO:0003746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L35 (predicted)","termid":"PBO:0003746"}


id: PR:000049784
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A myosin regulatory light chain 1 (Schizosaccharomyces pombe 972h-) that has been phosphorylated on two consecutive residues equivalent to Ser-35 and Ser-36 in the sequence represented by UniProtKB:Q9UUG5-1. Example: UniProtKB:Q9UUG5-1, Ser-35/Ser-36, MOD:00046.","definition_xrefs":["PMID:19029336","PMID:19570908","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin regulatory light chain 1 (Schizosaccharomyces pombe 972h-)","termid":"PR:Q9UUG5"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rlc1/Phos(S35,S36)","pombase_gene_id":"SPAC926.03","synonyms":[{"name":"PomBase_original_PRO_term_name: myosin regulatory light chain 1 phosphorylated 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Rlc1p phosphorylated 1","type":"broad"},{"name":"myosin II regulatory light chain Rlc1p Ser-35/Ser-36 phosphorylated","type":"related"},{"name":"rlc1/Phos(S35,S36)","type":"exact"}],"termid":"PR:000049784"}


id: PBO:0055302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2729","termid":"PBO:0055302"}


id: FYPO:0001676
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is not normally found in the nucleus is observed there during S phase of a mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to nucleus during vegetative growth","termid":"FYPO:0000784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"protein mislocalized to nucleus during mitotic S phase","synonyms":[{"name":"ectopic protein localization to nucleus during mitotic S phase","type":"exact"},{"name":"protein mislocalised to nucleus during S phase during vegetative growth","type":"exact"},{"name":"protein mislocalised to nucleus during mitotic S phase","type":"exact"},{"name":"protein mislocalized to nucleus during S phase during vegetative growth","type":"exact"},{"name":"protein mislocalized to nucleus during S phase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0001676"}


id: PBO:0085584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in apoptosis; variously described as containing a BCL-2 homology (BH3) domain or as a member of the BAX inhibitor family; reported to promote apoptosis under some conditions and to inhibit it in others; localizes to ER and vacuole; may link the unfolded protein response to apoptosis via regulation of calcium-mediated signaling; translocates to mitochondria under apoptosis-inducing conditions in a process involving Mir1p and Cor1p","termid":"PBO:0085584"}


id: PBO:0079860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-119 lipid binding chaperone","termid":"PBO:0079860"}


id: PBO:0075920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 12","termid":"PBO:0075920"}


id: FYPO:0003495
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of azetidine-2-carboxylic acid acetyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"abnormal azetidine-2-carboxylic acid acetyltransferase activity","termid":"FYPO:0003495"}


id: PBO:0050009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HK2 divergent transcript","termid":"PBO:0050009"}


id: PBO:0054955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2369","termid":"PBO:0054955"}


id: FYPO:0001099
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing carbonyl cyanide m-chlorophenyl hydrazone (CCCP).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000003","FYPO:0002057","FYPO:0000139","FYPO:0000257","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on CCCP","synonyms":[{"name":"normal cell population growth in presence of CCCP","type":"exact"},{"name":"normal cell population growth on CCCP","type":"exact"},{"name":"normal cell population growth on carbonyl cyanide m-chlorophenyl hydrazone","type":"exact"},{"name":"normal cellular response to CCCP","type":"related"},{"name":"normal vegetative cell population growth on CCCP","type":"exact"}],"termid":"FYPO:0001099"}


id: GO:0043688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification process that results in the conversion of aspartate charged on a tRNA(Asn) to asparaginyl-tRNA.","definition_xrefs":["GOC:jsg","PMID:9789001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"charged-tRNA amino acid modification","termid":"GO:0019988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"conversion of aspartyl-tRNA to asparaginyl-tRNA","termid":"GO:0043688"}


id: GO:1903186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vitellogenesis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:19467235","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"vitellogenesis","termid":"GO:0007296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vitellogenesis","synonyms":[{"name":"regulation of yolk production","type":"exact"}],"termid":"GO:1903186"}


id: PBO:0054445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1842","termid":"PBO:0054445"}


id: GO:0140474
data:
  {"annotated_genes":["SJAG_03416","SJAG_03710","SJAG_04370","SJAG_01305"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86963,101894,103577,103706],"is_not":false,"summary":null,"term":"GO:0140474"}]},"cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together a mitochondrion and an ER membrane either via membrane lipid binding or by interacting with a mitochondrial outer membrane protein, to establish or maintain the localization of the mitochondrion.","definition_xrefs":["PMID:19556461","PMID:27875684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum-organelle membrane tether activity","termid":"GO:0170009"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01305":null,"SJAG_03416":null,"SJAG_03710":null,"SJAG_04370":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0030674","GO:0003674"],"is_obsolete":false,"name":"mitochondrion-endoplasmic reticulum membrane tether activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ER-mitochondrion membrane adaptor activity","type":"exact"},{"name":"ER-mitochondrion membrane tether activity","type":"exact"},{"name":"endoplasmic reticulum-mitochondrion membrane adaptor activity","type":"exact"},{"name":"endoplasmic reticulum-mitochondrion membrane tether activity","type":"exact"},{"name":"mitochondrion-ER membrane adaptor activity","type":"exact"},{"name":"mitochondrion-ER membrane tether activity","type":"exact"},{"name":"mitochondrion-endoplasmic reticulum membrane adaptor activity","type":"exact"}],"termid":"GO:0140474","terms_by_termid":{"GO:0140474":null}}


id: FYPO:0005097
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is abnormally arrested during G1 phase. Arrest may either occur under conditions where arrest is not a normal occurrence, or may progress differently from normal under conditions where arrest normally does take place.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle arrest in mitotic G1 phase","termid":"FYPO:0000445"},{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic interphase","termid":"FYPO:0001028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell cycle arrest in mitotic G1 phase","synonyms":[{"name":"abnormal cell cycle arrest in G1 phase during mitotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic G1 phase during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle arrest in G1 phase","type":"exact"}],"termid":"FYPO:0005097"}


id: PBO:0067626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 798, pseudogene","termid":"PBO:0067626"}


id: GO:0097236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of deprivation of zinc ions.","definition_xrefs":["PMID:19702872","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to zinc ion starvation (obsolete GO:0097236)","termid":"GO:0097236"}


id: PBO:0087556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of SEACAT, a subcomplex of the SEA complex; Mtc1p, along with Rtc1p and Sea4p, redundantly inhibit the TORC1 inhibitory role of the Iml1p/SEACIT (Iml1p-Npr2p-Npr3p) subcomplex, a GAP for GTPase Gtr1p (EGOC subunit) in response to amino acid limitation, thereby resulting in activation of TORC1 signaling; SEA is a coatomer-related complex that associates dynamically with the vacuole; relative distribution to the vacuolar membrane decreases upon DNA replication stress","termid":"PBO:0087556"}


id: PBO:0045962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"egl-9 family hypoxia inducible factor 1 pseudogene 1","termid":"PBO:0045962"}


id: PBO:0028942
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_non-growing_cell_tip","termid":"PBO:0028942"}


id: PBO:0034383
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-connects","termid":"PBO:0034383"}


id: GO:1902089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cell wall polysaccharide catabolic process that is involved in lateral root development.","definition_xrefs":["GOC:TermGenie","PMID:23479623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall polysaccharide catabolic process","termid":"GO:0044347"},{"relation_name":"part_of","term_name":"lateral root development","termid":"GO:0048527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0071554","GO:0008150"],"is_obsolete":false,"name":"cell wall polysaccharide catabolic process involved in lateral root development","synonyms":[{"name":"cell wall polysaccharide breakdown involved in lateral root development","type":"exact"}],"termid":"GO:1902089"}


id: PBO:0057777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2392","termid":"PBO:0057777"}


id: PBO:0083457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene HSF1; null mutant displays increased resistance to antifungal agents gliotoxin, cycloheximide and H2O2","termid":"PBO:0083457"}


id: GO:0009476
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete class IV cytochrome c (obsolete GO:0009476)","synonyms":[{"name":"class IV cytochrome c","type":"exact"}],"termid":"GO:0009476"}


id: GO:0008297
data:
  {"annotated_genes":["SJAG_00377","SJAG_05373","SJAG_01648","SJAG_02908","SJAG_05280"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103410,84623,97202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008310"},{"annotations":[107650,93198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045145"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of mononucleotides from a free 5' or 3' terminus of a single-stranded DNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA exonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016895"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00377":null,"SJAG_01648":null,"SJAG_02908":null,"SJAG_05280":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0016787","GO:0016788","GO:0003674","GO:0004527"],"is_obsolete":false,"name":"single-stranded DNA exodeoxyribonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"single-stranded DNA specific exodeoxyribonuclease activity","type":"related"},{"name":"ssDNA-specific exodeoxyribonuclease activity","type":"related"}],"termid":"GO:0008297","terms_by_termid":{"GO:0008310":null,"GO:0045145":null}}


id: PBO:0000884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-glycosylation protein (predicted)","termid":"PBO:0000884"}


id: PBO:0000935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylic ester hydrolase activity (predicted)","termid":"PBO:0000935"}


id: FYPO:0006444
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A conjugation phenotype in which regulation of transcription in response to starvation for one or more amino acids is abnormal.","definition_xrefs":["PMID:29432178","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to starvation during vegetative growth","termid":"FYPO:0001339"},{"relation_name":"is_a","term_name":"abnormal regulation of transcription during vegetative growth","termid":"FYPO:0004527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000298","FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal transcriptional response to amino acid starvation","synonyms":[{"name":"abnormal regulation of transcription from RNA polymerase II promoter in response to amino acid starvation","type":"exact"}],"termid":"FYPO:0006444"}


id: PBO:0045520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystrobrevin alpha","termid":"PBO:0045520"}


id: GO:0019121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of linking a protein to peptidoglycan via the epsilon amino group of lysine to the diaminopimelic acid of the peptidoglycan.","definition_xrefs":["RESID:AA0218"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidoglycan-protein cross-linking via N6-mureinyl-L-lysine (obsolete GO:0019121)","termid":"GO:0019121"}


id: PBO:0052330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1671","termid":"PBO:0052330"}


id: PBO:0053562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 572","termid":"PBO:0053562"}


id: PBO:0054290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1681","termid":"PBO:0054290"}


id: RO:0002086
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"RO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ends_after","termid":"RO:0002086"}


id: GO:0075253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of uredospore formation, a process in which an asexual, dikaryotic, often rusty-colored spore, is formed in a structure called a uredinium.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043945"},{"relation_name":"is_a","term_name":"regulation of uredospore formation","termid":"GO:0075252"},{"relation_name":"positively_regulates","term_name":"uredospore formation","termid":"GO:0075251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of uredospore formation","synonyms":[{"name":"positive regulation of ureidospore formation","type":"exact"}],"termid":"GO:0075253"}


id: PBO:0061937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily M member 4 pseudogene","termid":"PBO:0061937"}


id: PBO:0044079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin pseudogene 1","termid":"PBO:0044079"}


id: FYPO:0001558
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of methionine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased amino acid import","termid":"FYPO:0001058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased methionine import","synonyms":[{"name":"decreased L-methionine import","type":"exact"},{"name":"decreased L-methionine import across plasma membrane","type":"exact"},{"name":"decreased methionine import into cell","type":"exact"},{"name":"decreased methionine transport into cell","type":"exact"},{"name":"decreased methionine uptake","type":"exact"},{"name":"reduced methionine import","type":"exact"},{"name":"reduced methionine uptake","type":"exact"}],"termid":"FYPO:0001558"}


id: GO:0010340
data:
  {"annotated_genes":["SJAG_05016","SJAG_02660"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0018423"},{"annotations":[83913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004671"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group to the carboxyl group of an acceptor molecule to form a methyl ester.","definition_xrefs":["PMID:17220201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02660":null,"SJAG_05016":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"carboxyl-O-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010340","terms_by_termid":{"GO:0004671":null,"GO:0018423":null}}


id: GO:0030346
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein phosphatase 2B.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphatase binding","termid":"GO:0019903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"protein phosphatase 2B binding","synonyms":[{"name":"calcineurin binding","type":"exact"},{"name":"protein phosphatase 3 binding","type":"related"}],"termid":"GO:0030346"}


id: PBO:0087518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of hexameric RecA-like ATPase Elp456 Elongator subcomplex; which is required for modification of wobble nucleosides in tRNA; iki1 mutations confer resistance to the K. lactis toxin zymocin","termid":"PBO:0087518"}


id: PBO:0050923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFITM3P pseudogene 6","termid":"PBO:0050923"}


id: PBO:0049181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GREM1 antisense RNA 1","termid":"PBO:0049181"}


id: GO:0030284
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with estrogen and transmitting the signal within the cell to trigger a change in cell activity or function.","definition_xrefs":["GOC:signaling","PMID:17615392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear steroid receptor activity","termid":"GO:0003707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003700"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003700","GO:0003674","GO:0038023","GO:0140110"],"is_obsolete":false,"name":"nuclear estrogen receptor activity","synonyms":[{"name":"estrogen receptor activity","type":"broad"}],"termid":"GO:0030284"}


id: GO:0102748
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + geranylgeranyl-chlorophyll a + NADPH = dihydrogeranylgeranyl-chlorophyll a + NADP.","definition_xrefs":["EC:1.3.1.-","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete geranylgeranyl-chlorophyll a reductase activity (obsolete GO:0102748)","secondary_identifiers":["MetaCyc:RXN-7664"],"termid":"GO:0102748"}


id: GO:1990263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A MAPK cascade that occurs as a result of deprivation of nourishment.","definition_xrefs":["GOC:al","PMID:7501024"],"gene_count":0,"genotype_count":0,"name":"obsolete spore wall assembly MAPK cascade (obsolete GO:1990263)","synonyms":[{"name":"MAPK cascade in response to starvation","type":"exact"},{"name":"MAPK cascade involved in nutrient response signaling","type":"exact"}],"termid":"GO:1990263"}


id: PBO:0051822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IRF1 antisense RNA 1","termid":"PBO:0051822"}


id: PBO:0003196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase complex subunit Rxt2","termid":"PBO:0003196"}


id: PR:O94728
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1604.16c gene.","definition_xrefs":["UniProtKB:O94728","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1604.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.16c","synonyms":[{"name":"Spom972h-SPBC1604.16c","type":"exact"}],"termid":"PR:O94728"}


id: PBO:0053232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligatin","termid":"PBO:0053232"}


id: GO:0018783
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: deisopropyldeethylatrazine + H2O = 2-chloro-4-hydroxy-6-amino-1,3,5-triazine + NH3.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete deisopropyldeethylatrazine hydrolase activity (obsolete GO:0018783)","termid":"GO:0018783"}


id: PBO:0088134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane protein required for magnesium homeostasis; putative magnesium transporter; has similarity to Alr1p and Alr2p, which mediate influx of Mg2+ and other divalent cations; localizes to sites of contact between the vacuole and mitochondria (vCLAMPs)","termid":"PBO:0088134"}


id: GO:1904904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endothelial cell-matrix adhesion via fibronectin.","definition_xrefs":["GO_REF:0000058","GOC:BHF_miRNA","PMID:19460962","GOC:bc","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-matrix adhesion","termid":"GO:0001952"},{"relation_name":"regulates","term_name":"endothelial cell-matrix adhesion via fibronectin","termid":"GO:0090674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of endothelial cell-matrix adhesion via fibronectin","termid":"GO:1904904"}


id: PBO:0079408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 8 class VIII pseudogene 2","termid":"PBO:0079408"}


id: PBO:0045227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C15","termid":"PBO:0045227"}


id: GO:0048673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which outgrowths develop from the axons of intact undamaged neurons as a result of injury to an axon. The collateral sprouts typically appear from undamaged axons in a tissue which has had part of its nerve supply removed, and they can often innervate successfully any cells that have lost some or all of their original synaptic input.","definition_xrefs":["GOC:jid","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon regeneration","termid":"GO:0031103"},{"relation_name":"is_a","term_name":"collateral sprouting","termid":"GO:0048668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"collateral sprouting of intact axon in response to injury","termid":"GO:0048673"}


id: GO:0043619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Modulation of the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is under oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to oxidative stress (obsolete GO:0043619)","termid":"GO:0043619"}


id: GO:0030316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized monocyte acquires the specialized features of an osteoclast. An osteoclast is a specialized phagocytic cell associated with the absorption and removal of the mineralized matrix of bone tissue.","definition_xrefs":["CL:0000092","GOC:add","ISBN:0781735149","PMID:12161749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte differentiation","termid":"GO:0002573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"osteoclast differentiation","synonyms":[{"name":"osteoclast cell differentiation","type":"exact"}],"termid":"GO:0030316"}


id: PBO:0062753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily L member 2 pseudogene","termid":"PBO:0062753"}


id: FYPO:0007273
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cortical endoplasmic reticulum (ER) remodeling occurs to a greater extent than normal. Cortical ER remodeling is the dynamic spatial rearrangement of ER tubules near the cell cortex.","definition_xrefs":["PMID:32023460","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cortical endoplasmic reticulum organization","termid":"FYPO:0007571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cortical endoplasmic reticulum remodeling","synonyms":[{"name":"increased cortical ER remodeling","type":"exact"},{"name":"increased cortical endoplasmic reticulum remodeling during mitotic cell cycle","type":"related"},{"name":"increased cortical endoplasmic reticulum remodeling during vegetative growth","type":"exact"}],"termid":"FYPO:0007273"}


id: GO:0070896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transposon integration, a process in which a transposable element is incorporated into another DNA molecule.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transposon integration (obsolete GO:0070896)","synonyms":[{"name":"activation of transposon integration","type":"narrow"},{"name":"stimulation of transposon integration","type":"narrow"},{"name":"up regulation of transposon integration","type":"exact"},{"name":"up-regulation of transposon integration","type":"exact"},{"name":"upregulation of transposon integration","type":"exact"}],"termid":"GO:0070896"}


id: PBO:0040351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit g like","termid":"PBO:0040351"}


id: PBO:0041025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BPI fold containing family C","termid":"PBO:0041025"}


id: PBO:0108762
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ageing-Associated LncRNA","termid":"PBO:0108762"}


id: SO:0000852
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of an exon.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_region","termid":"SO:0000833"},{"relation_name":"part_of","term_name":"exon","termid":"SO:0000147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exon_region","synonyms":[{"name":"exon region","type":"exact"}],"termid":"SO:0000852"}


id: PBO:0048232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 2C","termid":"PBO:0048232"}


id: FYECO:0000372
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which manumycin A was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ manumycin A","synonyms":[{"name":"+ manu-A","type":"exact"}],"termid":"FYECO:0000372"}


id: GO:0097690
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents, or reduces the activity of an iron ion transmembrane transporter.","definition_xrefs":["PMID:15514116","GOC:BHF","GOC:kom"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter inhibitor activity","termid":"GO:0141110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0140678"],"is_obsolete":false,"name":"iron ion transmembrane transporter inhibitor activity","synonyms":[{"name":"iron channel inhibitor activity","type":"exact"}],"termid":"GO:0097690"}


id: GO:0017155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete sodium:hydrogen antiporter regulator activity (obsolete GO:0017155)","synonyms":[{"name":"sodium:hydrogen antiporter regulator activity","type":"exact"},{"name":"sodium:proton antiporter regulator","type":"exact"}],"termid":"GO:0017155"}


id: PBO:0061126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family member X1","termid":"PBO:0061126"}


id: PBO:0069861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1148, pseudogene","termid":"PBO:0069861"}


id: PBO:0085229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Part of the CCR4-NOT transcriptional regulatory complex; involved in controlling mRNA initiation, elongation, and degradation; contains a PH-like domain; CAF120 has a paralog, SKG3, that arose from the whole genome duplication","termid":"PBO:0085229"}


id: PBO:0060605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear cap binding protein subunit 1","termid":"PBO:0060605"}


id: GO:2001092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an arabinotrioseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisaccharide transport","termid":"GO:2001088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"arabinotriose transport","termid":"GO:2001092"}


id: PBO:0055370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2799","termid":"PBO:0055370"}


id: PBO:0061259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notch 2 N-terminal like B","termid":"PBO:0061259"}


id: PBO:0044351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 38","termid":"PBO:0044351"}


id: GO:2000348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signaling via the CD40 signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"CD40 signaling pathway","termid":"GO:0023035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of CD40 signaling pathway","synonyms":[{"name":"regulation of CD40 signalling pathway","type":"exact"}],"termid":"GO:2000348"}


id: PBO:0090045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor domain superfamily protein","termid":"PBO:0090045"}


id: PBO:0005021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threo-3-hydroxyaspartate ammonia-lyase (predicted)","termid":"PBO:0005021"}


id: PBO:0090688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial lysine-tRNA ligase Msk1","termid":"PBO:0090688"}


id: GO:1903584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone deubiquitination.","definition_xrefs":["PMID:24526689","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone deubiquitination (obsolete GO:1903584)","synonyms":[{"name":"regulation of histone deubiquitinylation","type":"exact"},{"name":"regulation of histone deubiquitylation","type":"exact"}],"termid":"GO:1903584"}


id: FYPO:0009018
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a higher than normal proportion of cells in the population remains viable after entering stationary phase, when subjected to glucose starvation and when cadmium is present in the medium in a higher proportion than usual.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased viability in stationary phase","termid":"FYPO:0001309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"increased viability in stationary phase upon glucose starvation in the presence of cadmium","termid":"FYPO:0009018"}


id: PBO:0087702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RES complex; RES complex is required for nuclear retention of unspliced pre-mRNAs; acts in the same pathway as Pml39p and Mlp1p","termid":"PBO:0087702"}


id: GO:0075248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aeciospore formation, a process in which a dikaryotic spore of typically a rust fungus is produced in an aecium.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043943"},{"relation_name":"regulates","term_name":"aeciospore formation","termid":"GO:0075247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of aeciospore formation","termid":"GO:0075248"}


id: FYPO:0002846
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of ungerminated spores, germinated spores and small vegetative cells. The spheroid cells arise from division of some of the germinated spores, and may form a microcolony of up to 64 cells.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including spores, germinated spores and small cells (obsolete FYPO:0002846)","termid":"FYPO:0002846"}


id: GO:0050163
data:
  {"annotated_genes":["SJAG_00493"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102829],"is_not":false,"summary":null,"term":"GO:0050163"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: oxaloacetate = <stereo>enol</stereo>-oxaloacetate.","definition_xrefs":["EC:5.3.2.2","RHEA:16021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting keto- and enol-groups","termid":"GO:0016862"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00493":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxaloacetate tautomerase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00363","MetaCyc:OXALOACETATE-TAUTOMERASE-RXN"],"synonyms":[{"name":"oxalacetic keto-enol isomerase activity","type":"related"},{"name":"oxaloacetate keto-enol tautomerase activity","type":"related"},{"name":"oxaloacetate keto-enol-isomerase activity","type":"related"}],"termid":"GO:0050163","terms_by_termid":{"GO:0050163":null}}


id: PBO:0042171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular communication network factor 2","termid":"PBO:0042171"}


id: GO:0046089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cytosine, 4-amino-2-hydroxypyrimidine, a pyrimidine derivative that is one of the five main bases found in nucleic acids; it occurs widely in cytidine derivatives.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase biosynthetic process","termid":"GO:0019856"},{"relation_name":"is_a","term_name":"cytosine metabolic process","termid":"GO:0019858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cytosine biosynthetic process","synonyms":[{"name":"cytosine anabolism","type":"exact"},{"name":"cytosine biosynthesis","type":"exact"},{"name":"cytosine formation","type":"exact"},{"name":"cytosine synthesis","type":"exact"}],"termid":"GO:0046089"}


id: PBO:0053115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipocalin 1 pseudogene 2","termid":"PBO:0053115"}


id: GO:0003346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell that have undergone an epithelial to mesenchymal transition from the epicardium into the myocardium.","definition_xrefs":["PMID:18722343","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in heart development","termid":"GO:0060973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epicardium-derived cell migration to the myocardium","termid":"GO:0003346"}


id: PBO:0054732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2141","termid":"PBO:0054732"}


id: PBO:0034613
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nucleosome_occupancy_at_centromere_central_core","termid":"PBO:0034613"}


id: PBO:0043437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNKSR family member 3","termid":"PBO:0043437"}


id: GO:0008228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a microorganism (or other particulate material) is rendered more susceptible to phagocytosis by coating with an opsonin, a blood serum protein such as a complement component or antibody.","definition_xrefs":["ISBN:0198506732","GOC:add","ISBN:0781735149","ISBN:068340007X","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"},{"relation_name":"positively_regulates","term_name":"phagocytosis, recognition","termid":"GO:0006910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"opsonization","secondary_identifiers":["Wikipedia:Opsonin"],"termid":"GO:0008228"}


id: PBO:0048324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 35","termid":"PBO:0048324"}


id: GO:0005969
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the formation of hydroxypyruvate and alanine from serine and pyruvate.","definition_xrefs":["EC:2.6.1.51"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"serine-pyruvate aminotransferase complex","secondary_identifiers":["GO:0005970"],"synonyms":[{"name":"serine-pyruvate aminotransferase, type 1 complex","type":"narrow"},{"name":"serine-pyruvate aminotransferase, type 2B complex","type":"narrow"}],"termid":"GO:0005969"}


id: PBO:0045851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 41","termid":"PBO:0045851"}


id: PBO:0028885
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_splicing","termid":"PBO:0028885"}


id: MOD:00083
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6,N6,N6-trimethyl-L-lysine.","definition_xrefs":["PubMed:4304194","RESID:AA0074","PubMed:6778808","ChEBI:17311","PubMed:12590383","PubMed:3145979","PubMed:7093227","PubMed:8453381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"},{"relation_name":"is_a","term_name":"methylated lysine","termid":"MOD:00663"},{"relation_name":"is_a","term_name":"trimethylated protonated-residue","termid":"MOD:00711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N6,N6,N6-trimethyl-L-lysine","synonyms":[{"name":"(5S)-5-amino-5-carboxy-N,N,N-trimethylpentan-1-aminium","type":"exact"},{"name":"2-amino-6-(trimethylammonio)hexanoic acid","type":"exact"},{"name":"5-azanyl-5-carboxy-N,N,N-trimethylpentanazanium","type":"exact"},{"name":"MOD_RES N6,N6,N6-trimethyllysine","type":"exact"},{"name":"N(zeta)-trimethyllysine","type":"exact"},{"name":"N-trimethylation (of lysine)","type":"exact"},{"name":"N6,N6,N6-trimethyl-L-lysine","type":"exact"},{"name":"N6,N6,N6-trimethylated L-lysine","type":"exact"},{"name":"N6,N6,N6-trimethyllysin-N6-ium","type":"exact"},{"name":"N6,N6,N6-trimethyllysine cation","type":"exact"},{"name":"N6Me3+Lys","type":"exact"},{"name":"Trimethyl","type":"related"},{"name":"epsilon-trimethyllysine","type":"exact"},{"name":"tri-Methylation","type":"related"}],"termid":"MOD:00083"}


id: PBO:0062387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 7 pseudogene","termid":"PBO:0062387"}


id: PBO:0025450
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human GNB2L1","termid":"PBO:0025450"}


id: GO:0050800
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of GTP to directly drive the cellular or subcellular transport of a substance.","definition_xrefs":["EC:3.6.5.-","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete hydrolase activity, acting on acid anhydrides, acting on GTP, involved in cellular and subcellular movement (obsolete GO:0050800)","synonyms":[{"name":"hydrolase activity, acting on acid anhydrides, acting on GTP, involved in cellular and subcellular movement","type":"exact"}],"termid":"GO:0050800"}


id: PBO:0086858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative RNA exonuclease; possibly involved in pre-rRNA processing and ribosome assembly","termid":"PBO:0086858"}


id: PBO:0050782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 1F","termid":"PBO:0050782"}


id: PBO:0091552
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleterious Haploid Meiosis","termid":"PBO:0091552"}


id: PBO:0067142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 190, pseudogene","termid":"PBO:0067142"}


id: PBO:0014236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase involved in ubiquitin-mediated protein degradation Cdc48","termid":"PBO:0014236"}


id: GO:0140222
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The enclosed volume within the sealed membrane of a pathogen-containing vacuole.","definition_xrefs":["PMID:10560000","PMID:26842840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane-enclosed lumen","termid":"GO:0031974"},{"relation_name":"part_of","term_name":"pathogen-containing vacuole","termid":"GO:0140220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"pathogen-containing vacuole lumen","synonyms":[{"name":"lumen of a pathogen-containing vacuole","type":"exact"},{"name":"pathogen inclusion lumen","type":"related"},{"name":"pathogen-containing compartment lumen","type":"exact"},{"name":"pathogen-containing vacuolar lumen","type":"exact"}],"termid":"GO:0140222"}


id: PBO:0078700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAA) 2-1","termid":"PBO:0078700"}


id: PBO:0045937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ephrin A2","termid":"PBO:0045937"}


id: PBO:0056950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 16-2","termid":"PBO:0056950"}


id: GO:0006494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A protein amino acid glycosylation process in which a sugar unit is added to a free alpha-amino or alpha-carboxyl terminal of a peptide.","definition_xrefs":["GOC:jsg"],"gene_count":0,"genotype_count":0,"name":"obsolete protein amino acid terminal glycosylation (obsolete GO:0006494)","synonyms":[{"name":"protein amino acid terminal glycosylation","type":"exact"}],"termid":"GO:0006494"}


id: PBO:0070874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 5","termid":"PBO:0070874"}


id: PBO:0084611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a protein; YKR099C-A was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YKR100C","termid":"PBO:0084611"}


id: PR:000050547
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the pxl1 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain-containing protein C4F6.12 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC4F6.12","termid":"PR:000050547"}


id: PBO:0091718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane palmitoyltransferase Pfa5","termid":"PBO:0091718"}


id: PBO:0061193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronatin","termid":"PBO:0061193"}


id: PBO:0042627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 2B","termid":"PBO:0042627"}


id: PBO:0074684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 64","termid":"PBO:0074684"}


id: PBO:0062859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otoraplin","termid":"PBO:0062859"}


id: CHEBI:48080
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brefeldin A","termid":"CHEBI:48080"}


id: GO:0019116
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-hydroxynicotine + H2O + O2 = 1-(6-hydroxypyrid-3-yl)-4-(methylamino)butan-1-one + hydrogen peroxide.","definition_xrefs":["GOC:jl","PMID:16095622"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","termid":"GO:0016647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"hydroxy-nicotine oxidase activity","termid":"GO:0019116"}


id: PR:P87143
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC57A7.13 gene.","definition_xrefs":["UniProtKB:P87143","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C57A7.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A7.13","synonyms":[{"name":"Spom972h-SPAC57A7.13","type":"exact"}],"termid":"PR:P87143"}


id: PBO:0042098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC169-SOHLH2 readthrough","termid":"PBO:0042098"}


id: GO:0044049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance secreted by the other (symbiont) organism via a type VI secretion system. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via protein secreted by type VI secretion system (obsolete GO:0044049)","termid":"GO:0044049"}


id: PBO:0005235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p21 activated protein kinase inhibitor Skb15","termid":"PBO:0005235"}


id: PBO:0074982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-24","termid":"PBO:0074982"}


id: PBO:0044835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 123","termid":"PBO:0044835"}


id: GO:0006026
data:
  {"annotated_genes":["SJAG_00620"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006032"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of aminoglycans, any polymer containing amino groups that consists of more than about 10 monosaccharide residues joined to each other by glycosidic linkages.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycan metabolic process","termid":"GO:0006022"},{"relation_name":"is_a","term_name":"macromolecule catabolic process","termid":"GO:0009057"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00620":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aminoglycan catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"aminoglycan breakdown","type":"exact"},{"name":"aminoglycan catabolism","type":"exact"},{"name":"aminoglycan degradation","type":"exact"}],"termid":"GO:0006026","terms_by_termid":{"GO:0006032":null}}


id: PBO:0029302
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delaminated_cell_wall","termid":"PBO:0029302"}


id: PBO:0082269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ammonium permease of high capacity and low affinity; belongs to Mep-Amt-Rh family of well-conserved ammonium (NH4+) transporters that includes the human Rh factors; expression is under the nitrogen catabolite repression regulation ammonia permease activity regulated by TORC1 effectors, Npr1p and Par32p; MEP3 has a paralog, MEP1, that arose from the whole genome duplication","termid":"PBO:0082269"}


id: PBO:0005671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrofolate reductase Dfr1","termid":"PBO:0005671"}


id: PBO:0002705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0061 family protein","termid":"PBO:0002705"}


id: GO:0019039
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete viral-cell fusion molecule activity (obsolete GO:0019039)","synonyms":[{"name":"viral-cell fusion molecule activity","type":"exact"}],"termid":"GO:0019039"}


id: PBO:0059313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L53","termid":"PBO:0059313"}


id: GO:0060887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the epidermis of the limb over time, from its formation to the mature structure. The limb epidermis is the outer epithelial layer of the limb, it is a complex stratified squamous epithelium.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin epidermis development","termid":"GO:0098773"},{"relation_name":"part_of","term_name":"limb development","termid":"GO:0060173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limb epidermis development","termid":"GO:0060887"}


id: FYPO:0004043
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains four nuclei.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"tetranucleate vegetative cell","synonyms":[{"name":"tetranucleate cells during vegetative growth","type":"exact"},{"name":"tetranucleate during vegetative growth","type":"exact"},{"name":"tetranucleate vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004043"}


id: PBO:0003859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk32 (predicted)","termid":"PBO:0003859"}


id: PBO:0018253
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cdc22 transcription start sites at -267 and -275","termid":"PBO:0018253"}


id: GO:0003978
data:
  {"annotated_genes":["SJAG_03818","SJAG_02951","SJAG_01784"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105645,109788,109789],"is_not":false,"summary":null,"term":"GO:0003978"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose = UDP-galactose.","definition_xrefs":["EC:5.1.3.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01784":null,"SJAG_02951":null,"SJAG_03818":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"UDP-glucose 4-epimerase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5610036","MetaCyc:UDPGLUCEPIM-RXN","RHEA:22168","Reactome:R-HSA-70369"],"synonyms":[{"name":"4-epimerase activity","type":"related"},{"name":"UDP-D-galactose 4-epimerase activity","type":"related"},{"name":"UDP-galactose 4-epimerase activity","type":"related"},{"name":"UDP-glucose epimerase activity","type":"related"},{"name":"UDPG-4-epimerase activity","type":"related"},{"name":"UDPgalactose 4-epimerase activity","type":"related"},{"name":"UDPglucose 4-epimerase activity","type":"related"},{"name":"galactowaldenase activity","type":"related"},{"name":"uridine diphosphate galactose 4-epimerase activity","type":"related"},{"name":"uridine diphosphate glucose 4-epimerase activity","type":"related"},{"name":"uridine diphospho-galactose-4-epimerase activity","type":"related"},{"name":"uridine diphosphoglucose 4-epimerase activity","type":"related"},{"name":"uridine diphosphoglucose epimerase activity","type":"related"}],"termid":"GO:0003978","terms_by_termid":{"GO:0003978":null}}


id: PBO:0074124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 30 member 7","termid":"PBO:0074124"}


id: PBO:0077711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transition protein 1","termid":"PBO:0077711"}


id: PBO:0071283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 6","termid":"PBO:0071283"}


id: PBO:0086013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; SWAT-GFP and seamless-GFP fusion proteins localize to the endoplasmic reticulum; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching","termid":"PBO:0086013"}


id: GO:0004985
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an opioid (any narcotic derived from or resembling opium), and transmitting the signal across the membrane by activating an associated G-protein.","definition_xrefs":["GOC:bf","GOC:ai","PMID:20494127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled opioid receptor activity","synonyms":[{"name":"opioid receptor activity","type":"broad"}],"termid":"GO:0004985"}


id: PBO:0087590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the ARP2/3 complex; ARP2/3 is required for the motility and integrity of cortical actin patches; mutation is functionally complemented by human ARPC4","termid":"PBO:0087590"}


id: PBO:0082775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the SSU and 90S preribosomes; involved in pre-18S rRNA processing; binds to U3 snoRNA and Mpp10p; multicopy suppressor of sensitivity to Brefeldin A; expression is induced during lag phase and also by cold shock","termid":"PBO:0082775"}


id: GO:1990922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of hepatic stellate cells, resulting in the expansion of a hepatic stellate cell population. Hepatic stellate cells are found in the perisinusoidal space of the liver, and are capable of multiple roles including storage of retinol, presentation of antigen to T cells (including CD1d-restricted NKT cells), and upon activation, production of extracellular matrix components. This cell type comprises approximately 8-15% of total cells in the liver.","definition_xrefs":["GOC:sl","PMID:15358192","PMID:18466260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast proliferation","termid":"GO:0048144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatic stellate cell proliferation","synonyms":[{"name":"Ito cell proliferation","type":"exact"},{"name":"hepatic perisinusoidal cell proliferation","type":"exact"},{"name":"perisinusoidal cell proliferation","type":"exact"}],"termid":"GO:1990922"}


id: PBO:0077056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombospondin type 1 domain containing 1 pseudogene 1","termid":"PBO:0077056"}


id: PR:Q6LA53
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein AAR2 homolog that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A1 cistron-splicing factor aar2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H5.04","secondary_identifiers":["UniProtKB:Q6LA53"],"synonyms":[{"name":"Spom972h-AAR2","type":"exact"}],"termid":"PR:Q6LA53"}


id: PBO:0073548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 and multiple ankyrin repeat domains 2","termid":"PBO:0073548"}


id: PBO:0006172
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_target_cell","termid":"PBO:0006172"}


id: PATO:0000289
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000289 respiratory rate (obsolete PATO:0000289)","termid":"PATO:0000289"}


id: PBO:0042246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine receptor 8","termid":"PBO:0042246"}


id: GO:0072398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A signal transduction process that contributes to a cytokinesis checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle checkpoint signaling","termid":"GO:0007093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0023052","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"signal transduction involved in cytokinesis checkpoint","secondary_identifiers":["GO:0072419"],"termid":"GO:0072398"}


id: PBO:0075184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide F pseudogene 1","termid":"PBO:0075184"}


id: PBO:0042306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD24 molecule","termid":"PBO:0042306"}


id: PBO:0074794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 12C","termid":"PBO:0074794"}


id: GO:0009003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of a signal peptide from a protein precursor.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete signal peptidase activity (obsolete GO:0009003)","synonyms":[{"name":"signal peptidase activity","type":"exact"}],"termid":"GO:0009003"}


id: PBO:0060893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuraminidase 2","termid":"PBO:0060893"}


id: GO:0021669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to rhombomere 6. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:jid","GOC:cls","GOC:dgh","GO_REF:0000021","GOC:dph","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere formation","termid":"GO:0021594"},{"relation_name":"part_of","term_name":"rhombomere 6 morphogenesis","termid":"GO:0021667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 6 formation","termid":"GO:0021669"}


id: PBO:0047045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 107 member B","termid":"PBO:0047045"}


id: GO:0071629
data:
  {"annotated_genes":["SJAG_02419","SJAG_00552","SJAG_01556","SJAG_00173","SJAG_02341"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104056,105691,105795,106385,109685],"is_not":false,"summary":null,"term":"GO:0071629"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of misfolded proteins in the cytoplasm, which are targeted to cytoplasmic proteasomes for degradation.","definition_xrefs":["GOC:rb","PMID:20080635","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome-mediated ubiquitin-dependent protein catabolic process","termid":"GO:0043161"},{"relation_name":"is_a","term_name":"cytoplasm protein quality control","termid":"GO:0140455"},{"relation_name":"part_of","term_name":"cellular response to misfolded protein","termid":"GO:0071218"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00173":null,"SJAG_00552":null,"SJAG_01556":null,"SJAG_02341":null,"SJAG_02419":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"cytoplasm protein quality control by the ubiquitin-proteasome system","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytoplasm-associated proteasomal ubiquitin-dependent protein breakdown","type":"exact"},{"name":"cytoplasm-associated proteasomal ubiquitin-dependent protein catabolism","type":"exact"},{"name":"cytoplasm-associated proteasomal ubiquitin-dependent protein degradation","type":"exact"},{"name":"ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome","type":"exact"}],"termid":"GO:0071629","terms_by_termid":{"GO:0071629":null}}


id: MOD:01553
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Applied Biosystems iTRAQ8plex-116 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"iTRAQ8plex-116 reporter+balance reagent acylated residue","termid":"MOD:01549"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-116 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01553"}


id: PBO:0045088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoamide S-succinyltransferase pseudogene 1","termid":"PBO:0045088"}


id: PBO:0046954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM76A pseudogene 1","termid":"PBO:0046954"}


id: PBO:0039435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin and armadillo repeat containing","termid":"PBO:0039435"}


id: GO:0045591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of differentiation of regulatory T cells.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell differentiation","termid":"GO:0045582"},{"relation_name":"is_a","term_name":"regulation of regulatory T cell differentiation","termid":"GO:0045589"},{"relation_name":"positively_regulates","term_name":"regulatory T cell differentiation","termid":"GO:0045066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of regulatory T cell differentiation","synonyms":[{"name":"activation of regulatory T cell differentiation","type":"narrow"},{"name":"positive regulation of regulatory T cell development","type":"related"},{"name":"positive regulation of regulatory T lymphocyte differentiation","type":"exact"},{"name":"positive regulation of regulatory T-cell differentiation","type":"exact"},{"name":"positive regulation of regulatory T-lymphocyte differentiation","type":"exact"},{"name":"positive regulation of suppressor T cell differentiation","type":"exact"},{"name":"positive regulation of suppressor T-cell differentiation","type":"exact"},{"name":"stimulation of regulatory T cell differentiation","type":"narrow"},{"name":"up regulation of regulatory T cell differentiation","type":"exact"},{"name":"up-regulation of regulatory T cell differentiation","type":"exact"},{"name":"upregulation of regulatory T cell differentiation","type":"exact"}],"termid":"GO:0045591"}


id: GO:0016495
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a C-X3-C chemokine and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. A C-X3-C chemokine has three amino acids between the first two cysteines of the characteristic four-cysteine motif.","definition_xrefs":["GOC:dph","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine receptor activity","termid":"GO:0004950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"C-X3-C chemokine receptor activity","termid":"GO:0016495"}


id: PBO:0002056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpt5 (predicted)","termid":"PBO:0002056"}


id: PBO:0090043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER oxidoreductase Pbr1, implicated in lipid metabolism","termid":"PBO:0090043"}


id: GO:0032180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ubiquinone, beginning with the conversion of tyrosine to 4-hydroxybenzoate.","definition_xrefs":["GOC:mah","PMID:11583838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine metabolic process","termid":"GO:0006570"},{"relation_name":"is_a","term_name":"ubiquinone biosynthetic process","termid":"GO:0006744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006744"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006744","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"ubiquinone biosynthetic process from tyrosine","termid":"GO:0032180"}


id: PBO:0050502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXC cluster antisense RNA 2","termid":"PBO:0050502"}


id: PBO:0067035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 49, pseudogene","termid":"PBO:0067035"}


id: PBO:0078062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 52","termid":"PBO:0078062"}


id: PBO:0071761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P1 pseudogene 8","termid":"PBO:0071761"}


id: GO:0030834
data:
  {"annotated_genes":["SJAG_01894","SJAG_00279","SJAG_01993","SJAG_02700"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94955,88371,84326,110384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the disassembly of actin filaments by the removal of actin monomers from a filament.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin polymerization or depolymerization","termid":"GO:0008064"},{"relation_name":"is_a","term_name":"regulation of protein depolymerization","termid":"GO:1901879"},{"relation_name":"regulates","term_name":"actin filament depolymerization","termid":"GO:0030042"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"regulation of actin filament depolymerization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of actin depolymerization","type":"exact"}],"termid":"GO:0030834","terms_by_termid":{"GO:0051016":null}}


id: FYPO:0005296
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad52 (also called Rad22) accumulates is greater than normal during S phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:18045993"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of Rad52 foci during vegetative growth","termid":"FYPO:0000972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased number of Rad52 foci during mitotic S phase","synonyms":[{"name":"increased number of Rad22 foci during mitotic S phase","type":"exact"},{"name":"increased number of Rad52 foci during S phase of mitotic cell cycle","type":"exact"},{"name":"increased number of Rad52 foci during mitotic S phase during vegetative growth","type":"exact"}],"termid":"FYPO:0005296"}


id: GO:0060931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a sinoatrial (SA) node cell over time, from its formation to the mature state. SA node cells are pacemaker cells that are found in the sinoatrial node.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac pacemaker cell development","termid":"GO:0060926"},{"relation_name":"part_of","term_name":"sinoatrial node cell differentiation","termid":"GO:0060921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sinoatrial node cell development","synonyms":[{"name":"SA node cell development","type":"exact"},{"name":"SAN cell development","type":"exact"},{"name":"sinus node cell development","type":"narrow"}],"termid":"GO:0060931"}


id: PBO:0061129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMBR antisense RNA 1","termid":"PBO:0061129"}


id: PBO:0086572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YPR064W is not an essential gene","termid":"PBO:0086572"}


id: PBO:0042420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 27 pseudogene 4","termid":"PBO:0042420"}


id: PBO:0027681
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_transcription","termid":"PBO:0027681"}


id: GO:0009401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The uptake and phosphorylation of specific carbohydrates from the extracellular environment; uptake and phosphorylation are coupled, making the PTS a link between the uptake and metabolism of sugars; phosphoenolpyruvate is the original phosphate donor; phosphoenolpyruvate passes the phosphate via a signal transduction pathway, to enzyme 1 (E1), which in turn passes it on to the histidine protein, HPr; the next step in the system involves sugar-specific membrane-bound complex, enzyme 2 (EII), which transports the sugar into the cell; it includes the sugar permease, which catalyzes the transport reactions; EII is usually divided into three different domains, EIIA, EIIB, and EIIC.","definition_xrefs":["PMID:31209249","PMID:33820910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate import across plasma membrane","termid":"GO:0098704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"phosphoenolpyruvate-dependent sugar phosphotransferase system","synonyms":[{"name":"PTS system","type":"narrow"}],"termid":"GO:0009401"}


id: PBO:0004031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor complex subunit Iws1 (predicted)","termid":"PBO:0004031"}


id: PBO:0074346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 5","termid":"PBO:0074346"}


id: PR:P22189
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cta3 gene.","definition_xrefs":["UniProtKB:P22189","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium-transporting ATPase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.06","synonyms":[{"name":"Spom972h-cta3","type":"exact"}],"termid":"PR:P22189"}


id: GO:0004464
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: leukotriene C(4) = glutathione + leukotriene A(4).","definition_xrefs":["RHEA:17617","EC:4.4.1.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"leukotriene-C4 synthase activity","secondary_identifiers":["MetaCyc:LEUKOTRIENE-C4-SYNTHASE-RXN","Reactome:R-HSA-266050","KEGG_REACTION:R03059"],"synonyms":[{"name":"(7E,9E,11Z,14Z)-(5S,6R)-5,6-epoxyicosa-7,9,11,14-tetraenoate:glutathione leukotriene-transferase (epoxide-ring-opening)","type":"related"},{"name":"(7E,9E,11Z,14Z)-(5S,6R)-6-(glutathion-S-yl)-5-hydroxyicosa-7,9,11,14-tetraenoate glutathione-lyase (epoxide-forming)","type":"related"},{"name":"LTC(4) synthase activity","type":"related"},{"name":"LTC(4) synthetase activity","type":"related"},{"name":"LTC4 synthase activity","type":"related"},{"name":"LTC4 synthetase activity","type":"related"},{"name":"leukotriene A(4):glutathione S-leukotrienyltransferase activity","type":"related"},{"name":"leukotriene A4:glutathione S-leukotrienyltransferase activity","type":"related"},{"name":"leukotriene C(4) synthetase activity","type":"related"},{"name":"leukotriene C4 synthetase activity","type":"related"},{"name":"leukotriene-C4 glutathione-lyase (leukotriene-A4-forming)","type":"related"}],"termid":"GO:0004464"}


id: FYPO:0002817
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the first meiotic nuclear division is arrested under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormally arrested meiosis","termid":"FYPO:0000475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abnormally arrested meiosis I","synonyms":[{"name":"abnormal cell cycle arrest in meiosis I","type":"exact"},{"name":"abnormally arrested first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0002817"}


id: GO:0031107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled breakdown of a septin ring.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin ring organization","termid":"GO:0031106"},{"relation_name":"is_a","term_name":"organelle disassembly","termid":"GO:1903008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010"],"is_obsolete":false,"name":"septin ring disassembly","termid":"GO:0031107"}


id: GO:0038102
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacting with an activin receptor complex to reduce the action of another ligand, the agonist. A receptor antagonist does not initiate signaling upon binding to a receptor, but instead blocks an agonist from binding to the receptor.","definition_xrefs":["GOC:signaling","PMID:15062104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor antagonist activity","termid":"GO:0048019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0140678","GO:0098772","GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"activin receptor antagonist activity","termid":"GO:0038102"}


id: PBO:0035895
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_mitotic_spindle_pole_body_during_mitosis","termid":"PBO:0035895"}


id: PBO:0088471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial copper chaperone for cytochrome c oxidase Cox17","termid":"PBO:0088471"}


id: PBO:0113233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulator of the filamentous growth pathway; inhibits invasive growth by dampening the activity of the filamentous MAPK pathway; localizes to the cell wall and to the vacuole and cell periphery in HTP studies; deletion improves xylose fermentation in industrially engineered strains; nonessential gene","termid":"PBO:0113233"}


id: PBO:0017740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translationally controlled tumor protein homolog Tma19/Tpt1","termid":"PBO:0017740"}


id: GO:1905196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of ATPase activity, uncoupled.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:26545917"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of ATPase activity, uncoupled (obsolete GO:1905196)","synonyms":[{"name":"activation of ATPase activity, uncoupled","type":"narrow"},{"name":"activation of adenylpyrophosphatase activity","type":"related"},{"name":"positive regulation of adenylpyrophosphatase activity","type":"related"},{"name":"up regulation of ATPase activity, uncoupled","type":"exact"},{"name":"up regulation of adenylpyrophosphatase activity","type":"related"},{"name":"up-regulation of ATPase activity, uncoupled","type":"exact"},{"name":"up-regulation of adenylpyrophosphatase activity","type":"related"},{"name":"upregulation of ATPase activity, uncoupled","type":"exact"},{"name":"upregulation of adenylpyrophosphatase activity","type":"related"}],"termid":"GO:1905196"}


id: PBO:0056445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 18","termid":"PBO:0056445"}


id: PBO:0017669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine salvage haloacid dehalogenase-like hydrolase Utr4 (predicted)","termid":"PBO:0017669"}


id: PBO:0084538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the p24 family involved in ER to Golgi transport; role in misfolded protein quality control; forms a heterotrimeric complex with Erp1, Erp2p, and Emp24,","termid":"PBO:0084538"}


id: GO:1905719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within the perinuclear region of the cytoplasm.","definition_xrefs":["GO_REF:0000087","GOC:TermGenie","PMID:15177031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to perinuclear region of cytoplasm","synonyms":[{"name":"protein localisation in perinuclear region of cytoplasm","type":"exact"},{"name":"protein localisation to perinuclear region of cytoplasm","type":"exact"},{"name":"protein localization in perinuclear region of cytoplasm","type":"exact"},{"name":"protein localization to perinuclear cytoplasm","type":"exact"}],"termid":"GO:1905719"}


id: GO:0072537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in the morphology or behavior of a fibroblast resulting from exposure to an activating factor such as a cellular or soluble ligand.","definition_xrefs":["GOC:mah","CL:0000057","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation","termid":"GO:0001775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fibroblast activation","termid":"GO:0072537"}


id: GO:0102123
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gibberellin A4 + O2 + H+ + NAD(P)H = 16alpha,17-epoxy gibberellin A4 + H2O + NAD(P).","definition_xrefs":["GOC:pz","EC:1.14.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"gibberellin A4 16alpha,17 epoxidase activity","secondary_identifiers":["MetaCyc:RXN-11385"],"termid":"GO:0102123"}


id: PBO:0073232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO specific peptidase 5","termid":"PBO:0073232"}


id: PBO:0073538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 and PX domains 2B","termid":"PBO:0073538"}


id: PBO:0061530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSMCE1 divergent transcript","termid":"PBO:0061530"}


id: PBO:0031328
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cisplatin","termid":"PBO:0031328"}


id: PBO:0073632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 17, pseudogene","termid":"PBO:0073632"}


id: PBO:0070723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 28","termid":"PBO:0070723"}


id: PBO:0012285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ric8 family guanine nucleotide exchange factor synembryn family","termid":"PBO:0012285"}


id: GO:0019474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-lysine into other compounds, including acetyl-CoA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyl-CoA metabolic process","termid":"GO:0006084"},{"relation_name":"is_a","term_name":"L-lysine catabolic process","termid":"GO:0019477"},{"relation_name":"is_a","term_name":"amide catabolic process","termid":"GO:0043605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0055086","GO:0006790","GO:0006520","GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"L-lysine catabolic process to acetyl-CoA","synonyms":[{"name":"L-lysine breakdown to acetyl-CoA","type":"exact"},{"name":"L-lysine degradation to acetyl-CoA","type":"exact"}],"termid":"GO:0019474"}


id: PBO:0054514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1914","termid":"PBO:0054514"}


id: PBO:0048172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G3BP1 pseudogene 1","termid":"PBO:0048172"}


id: PBO:0089391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation regulator, HEAT repeat protein Gcn1","termid":"PBO:0089391"}


id: PBO:0086550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YEL028W is not an essential gene","termid":"PBO:0086550"}


id: PBO:0030947
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitochondrial_fusion","termid":"PBO:0030947"}


id: PBO:0002923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2AF small subunit, U2AF-23","termid":"PBO:0002923"}


id: GO:0160020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ferroptosis.","definition_xrefs":["PMID:32015325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of programmed cell death","termid":"GO:0043068"},{"relation_name":"is_a","term_name":"regulation of ferroptosis","termid":"GO:0110075"},{"relation_name":"positively_regulates","term_name":"ferroptosis","termid":"GO:0097707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ferroptosis","termid":"GO:0160020"}


id: PBO:0076782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tec protein tyrosine kinase","termid":"PBO:0076782"}


id: GO:0120145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a basal ectoplasmic specialization.","definition_xrefs":["PMID:22872576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell-cell junction","termid":"GO:0150105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to basal ectoplasmic specialization","synonyms":[{"name":"protein localisation in basal ectoplasmic specialization","type":"exact"},{"name":"protein localisation to basal ectoplasmic specialization","type":"exact"},{"name":"protein localization in basal ectoplasmic specialization","type":"exact"}],"termid":"GO:0120145"}


id: PBO:0063079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAPPA antisense RNA 1","termid":"PBO:0063079"}


id: PBO:0029639
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_TPCK","termid":"PBO:0029639"}


id: PBO:0060113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 14","termid":"PBO:0060113"}


id: FYPO:0008209
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 is normal at the  silent mating-type cassette (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0003224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal histone H3-K14 acetylation at silent mating-type cassette during vegetative growth","termid":"FYPO:0008209"}


id: GO:0070522
data:
  {"annotated_genes":["SJAG_02828"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[106872],"is_not":false,"summary":null,"term":"GO:0070522"}]},"cv_name":"cellular_component","definition":"A heterodimeric nucleotide-excision repair complex that has endonuclease activity specific for bubble structures characteristic of certain DNA lesions. The subunits are known as XPF/ERCC4 and ERCC1 in mammals, and Rad1p and Rad10p in S. cerevisiae.","definition_xrefs":["PMID:14734547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair complex","termid":"GO:0000109"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02828":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"ERCC4-ERCC1 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Rad1-Rad10 complex","type":"exact"},{"name":"XPF-ERCC1 complex","type":"exact"}],"termid":"GO:0070522","terms_by_termid":{"GO:0070522":null}}


id: PBO:0072107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S13 pseudogene 5","termid":"PBO:0072107"}


id: PBO:0033818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit 2-like Tca17 (predicted)","termid":"PBO:0033818"}


id: GO:0140904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process which results in the assembly, arrangement of constituent parts, or disassembly of a cytoophidium. Cytoophidia are mesoscale, intracellular, filamentous structures that contain metabolic enzymes.","definition_xrefs":["PMID:25223282","PMID:27362644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoophidium organization","termid":"GO:0140904"}


id: GO:1902305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sodium ion transmembrane transport.","definition_xrefs":["GOC:TermGenie","GOC:BHF","PMID:18591664","GOC:mtg_cardiac_conduct_nov11","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sodium ion transport","termid":"GO:0002028"},{"relation_name":"is_a","term_name":"regulation of monoatomic cation transmembrane transport","termid":"GO:1904062"},{"relation_name":"regulates","term_name":"sodium ion transmembrane transport","termid":"GO:0035725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"regulation of sodium ion transmembrane transport","synonyms":[{"name":"regulation of sodium ion membrane transport","type":"exact"}],"termid":"GO:1902305"}


id: PBO:0004263
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.3.2","termid":"PBO:0004263"}


id: GO:1905778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of exonuclease activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","GOC:BHF","GOC:nc","PMID:15200954","GOC:BHF_telomere"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nuclease activity","termid":"GO:0032074"},{"relation_name":"is_a","term_name":"regulation of exonuclease activity","termid":"GO:1905777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of exonuclease activity","synonyms":[{"name":"down regulation of exonuclease IX activity","type":"narrow"},{"name":"down regulation of exonuclease activity","type":"exact"},{"name":"down-regulation of exonuclease IX activity","type":"narrow"},{"name":"down-regulation of exonuclease activity","type":"exact"},{"name":"downregulation of exonuclease IX activity","type":"narrow"},{"name":"downregulation of exonuclease activity","type":"exact"},{"name":"inhibition of exonuclease IX activity","type":"narrow"},{"name":"inhibition of exonuclease activity","type":"narrow"},{"name":"negative regulation of exonuclease IX activity","type":"narrow"}],"termid":"GO:1905778"}


id: MOD:01570
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Applied Biosystems iTRAQ8plex-119 reporter+balance group.","definition_xrefs":["Unimod:731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(15)N isotope tagged reagent","termid":"MOD:01429"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated residue","termid":"MOD:01526"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at 304.199039 Da","termid":"MOD:01584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-119 reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01570"}


id: PBO:0089889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleoside-triphosphate reductase, anaerobic","termid":"PBO:0089889"}


id: GO:0003900
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1).","definition_xrefs":["EC:2.7.7.6"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA-directed RNA polymerase I activity (obsolete GO:0003900)","synonyms":[{"name":"DNA-directed RNA polymerase I activity","type":"exact"}],"termid":"GO:0003900"}


id: PBO:0038356
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-activity_directly_positively_regulates_activity_of","termid":"PBO:0038356"}


id: GO:0008521
data:
  {"annotated_genes":["SJAG_04325"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102748],"is_not":false,"summary":null,"term":"GO:0008521"}]},"cv_name":"molecular_function","definition":"Enables the transfer of acetyl-CoA from one side of a membrane to the other. Acetyl-CoA is a derivative of coenzyme A in which the sulfhydryl group is acetylated; it is a metabolite derived from several pathways (e.g. glycolysis, fatty acid oxidation, amino-acid catabolism) and is further metabolized by the tricarboxylic acid cycle. It is a key intermediate in lipid and terpenoid biosynthesis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"adenosine 3',5'-bisphosphate transmembrane transporter activity","termid":"GO:0071077"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04325":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"acetyl-CoA transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-727759","Reactome:R-HSA-5649742"],"synonyms":[{"name":"acetyl-CoA transporter activity","type":"related"}],"termid":"GO:0008521","terms_by_termid":{"GO:0008521":null}}


id: PBO:0048329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 40","termid":"PBO:0048329"}


id: MOD:00045
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to pros-phospho-L-histidine (N-pi-phospho-L-histidine, 3'-phospho-L-histidine).","definition_xrefs":["PubMed:7803390","RESID:AA0036","PubMed:5642389","PubMed:1549615","PubMed:6692818","PubMed:7669763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylated L-histidine","termid":"MOD:00890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"3'-phospho-L-histidine","synonyms":[{"name":"(2S)-2-amino-3-(3-phosphono-3H-imidazol-4-yl)propanoic acid","type":"exact"},{"name":"2-azanyl-3-(3-phosphono-3H-imidazol-4-yl)propanoic acid","type":"exact"},{"name":"3'-phospho-L-histidine","type":"exact"},{"name":"ACT_SITE Pros-phosphohistidine intermediate","type":"exact"},{"name":"MOD_RES Pros-phosphohistidine","type":"exact"},{"name":"N(pi)-phosphohistidine","type":"exact"},{"name":"N3-phosphonohistidine","type":"exact"},{"name":"ND1-phosphonohistidine","type":"exact"},{"name":"NpPHis","type":"exact"},{"name":"Npi-phosphorylated L-histidine","type":"exact"},{"name":"Phospho","type":"related"},{"name":"Phosphorylation","type":"related"},{"name":"histidine-1-phosphate","type":"related"},{"name":"histidine-N(delta)-phosphate","type":"exact"},{"name":"histidine-N3'-phosphate","type":"exact"},{"name":"pros-phosphohistidine","type":"exact"}],"termid":"MOD:00045"}


id: GO:0030881
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to beta-2-microglobulin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"beta-2-microglobulin binding","termid":"GO:0030881"}


id: PBO:0044126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 12, pseudogene","termid":"PBO:0044126"}


id: GO:0061394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Modulation of the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of an arsenic stimulus from compounds containing arsenic, including arsenates, arsenites, and arsenides.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to arsenic-containing substance (obsolete GO:0061394)","termid":"GO:0061394"}


id: PBO:0060640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor coactivator 3","termid":"PBO:0060640"}


id: FYPO:0004723
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the mitotic spindle is assembled in an incorrect orientation. Spindle orientation is later corrected so that the spindle is parallel to the long axis of the cell.","definition_xrefs":["PomBase:mah","PMID:15772152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"misoriented mitotic spindle","termid":"FYPO:0007388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000120","FYPO:0000054","FYPO:0001985","FYPO:0005447","FYPO:0002399","FYPO:0000002"],"is_obsolete":false,"name":"transiently misoriented mitotic spindle","synonyms":[{"name":"transient mitotic spindle misorientation","type":"exact"},{"name":"transient abnormal mitotic spindle orientation","type":"exact"},{"name":"transiently misoriented mitotic spindle during vegetative growth","type":"exact"},{"name":"transiently misoriented spindle during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0004723"}


id: GO:0039660
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a virion.","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of virion","synonyms":[{"name":"viral matrix protein","type":"narrow"}],"termid":"GO:0039660"}


id: PBO:0049816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 8","termid":"PBO:0049816"}


id: PBO:0070006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1303, pseudogene","termid":"PBO:0070006"}


id: GO:0070690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-threonine (the L-enantiomer of 2-amino-3-hydroxybutyric acid) into glycine and acetaldehyde, with acetaldehyde being subsequently converted to acetyl-CoA.","definition_xrefs":["GOC:bf","GOC:mah","MetaCyc:PWY-5436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyl-CoA metabolic process","termid":"GO:0006084"},{"relation_name":"is_a","term_name":"threonine catabolic process","termid":"GO:0006567"},{"relation_name":"is_a","term_name":"amide catabolic process","termid":"GO:0043605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150","GO:0044248","GO:0006520","GO:0006790"],"is_obsolete":false,"name":"L-threonine catabolic process to acetyl-CoA","synonyms":[{"name":"L-threonine breakdown to acetyl-CoA","type":"exact"},{"name":"L-threonine catabolism to acetyl-CoA","type":"exact"},{"name":"L-threonine degradation to acetyl-CoA","type":"exact"},{"name":"threonine catabolic process to acetyl-CoA","type":"broad"}],"termid":"GO:0070690"}


id: GO:0072191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of smooth muscle in the ureter over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle tissue development","termid":"GO:0048745"},{"relation_name":"part_of","term_name":"ureter development","termid":"GO:0072189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureter smooth muscle development","termid":"GO:0072191"}


