# terms

id: GO:0100035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates transmembrane transport.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transmembrane transport by transcription from RNA polymerase II promoter (obsolete GO:0100035)","termid":"GO:0100035"}


id: PATO:0000139
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000139 relative orientation (obsolete PATO:0000139)","termid":"PATO:0000139"}


id: PBO:0005137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUE domain protein Cue1/4 family involved in ER associated protein catabolism (predicted)","termid":"PBO:0005137"}


id: PBO:0056430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 3","termid":"PBO:0056430"}


id: GO:0001312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Replication of rDNA following its excision from the chromosome of dividing cells as they age. Extrachromosomal rDNA forms a circle that contains at least one autonomously replicating sequence (ARS), which supports replication independent of chromosomal replication.","definition_xrefs":["GOC:jh","PMID:12044934"],"gene_count":0,"genotype_count":0,"name":"obsolete replication of extrachromosomal rDNA circles involved in replicative cell aging (obsolete GO:0001312)","synonyms":[{"name":"replication of extrachromosomal rDNA circles during replicative cell ageing","type":"related"},{"name":"replication of extrachromosomal rDNA circles during replicative cell aging","type":"related"},{"name":"replication of extrachromosomal ribosomal DNA circles during replicative cell aging","type":"related"}],"termid":"GO:0001312"}


id: PBO:0036369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helper of TIM Hot13 (predicted)","termid":"PBO:0036369"}


id: GO:0018526
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-aminobenzoyl-CoA + 2 H+ + 2 e- = NH3 + benzoyl-CoA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-aminobenzoyl-CoA reductase activity (obsolete GO:0018526)","termid":"GO:0018526"}


id: PBO:0072516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 45","termid":"PBO:0072516"}


id: PBO:0031440
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_cytoplasm_during_vegetative_growth","termid":"PBO:0031440"}


id: GO:0009194
data:
  {"annotated_genes":["SJAG_00779"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[111645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrimidine ribonucleoside diphosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside diphosphate biosynthetic process","termid":"GO:0009139"},{"relation_name":"is_a","term_name":"ribonucleoside diphosphate biosynthetic process","termid":"GO:0009188"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside diphosphate metabolic process","termid":"GO:0009193"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00779":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"pyrimidine ribonucleoside diphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine ribonucleoside diphosphate anabolism","type":"exact"},{"name":"pyrimidine ribonucleoside diphosphate biosynthesis","type":"exact"},{"name":"pyrimidine ribonucleoside diphosphate formation","type":"exact"},{"name":"pyrimidine ribonucleoside diphosphate synthesis","type":"exact"}],"termid":"GO:0009194","terms_by_termid":{"GO:0006225":null,"GO:0046705":null}}


id: GO:0004708
data:
  {"annotated_genes":["SJAG_01181","SJAG_00993","SJAG_02342"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88236,106399,107040],"is_not":false,"summary":null,"term":"GO:0004708"}]},"cv_name":"molecular_function","definition":"Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a T-X-Y motif in the activation loop of a MAP kinase (MAPK) substrate.","definition_xrefs":["PMID:12623839","PMID:38270553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine/tyrosine kinase activity","termid":"GO:0004712"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_01181":null,"SJAG_02342":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0016740","GO:0016301","GO:0003824","GO:0004672"],"is_obsolete":false,"name":"MAP kinase kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.7.12.2","Reactome:R-HSA-450333","MetaCyc:2.7.12.2-RXN","Reactome:R-HSA-3238999","Reactome:R-HSA-448951","Reactome:R-HSA-5218804","Reactome:R-HSA-1247960"],"synonyms":[{"name":"ATP:protein phosphotransferase (MAPKKK-activated) activity","type":"related"},{"name":"ERK activator kinase activity","type":"exact"},{"name":"MAP kinase kinase 4 activity","type":"narrow"},{"name":"MAP kinase kinase 7 activity","type":"narrow"},{"name":"MAP kinase or ERK kinase activity","type":"related"},{"name":"MAP2K","type":"related"},{"name":"MAPK activator activity","type":"exact"},{"name":"MAPKK","type":"related"},{"name":"MAPKK activity","type":"exact"},{"name":"MAPKK1","type":"related"},{"name":"MEK activity","type":"broad"},{"name":"MEK1","type":"related"},{"name":"MEK2","type":"related"},{"name":"MKK","type":"related"},{"name":"MKK2","type":"related"},{"name":"MKK4","type":"related"},{"name":"MKK6","type":"related"},{"name":"MKK7","type":"related"},{"name":"STK27","type":"related"},{"name":"mitogen-activated protein kinase kinase activity","type":"related"}],"termid":"GO:0004708","terms_by_termid":{"GO:0004708":null}}


id: PBO:0048493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCSH pseudogene 5","termid":"PBO:0048493"}


id: GO:0001819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of production of a cytokine.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of cytokine production","secondary_identifiers":["GO:0042108","GO:0050715"],"synonyms":[{"name":"activation of cytokine production","type":"narrow"},{"name":"positive regulation of cytokine biosynthetic process","type":"narrow"},{"name":"positive regulation of cytokine secretion","type":"narrow"},{"name":"stimulation of cytokine production","type":"narrow"},{"name":"up regulation of cytokine production","type":"exact"},{"name":"up-regulation of cytokine production","type":"exact"},{"name":"upregulation of cytokine production","type":"exact"}],"termid":"GO:0001819"}


id: GO:0050463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nitrite + NAD(P)+ + H2O = nitrate + NAD(P)H + H+.","definition_xrefs":["EC:1.7.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrate reductase activity","termid":"GO:0008940"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor","termid":"GO:0046857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"nitrate reductase [NAD(P)H] activity","synonyms":[{"name":"NAD(P)H bispecific nitrate reductase activity","type":"related"},{"name":"NAD(P)H-nitrate reductase activity","type":"related"},{"name":"NAD(P)H2:nitrate oxidoreductase activity","type":"related"},{"name":"NAD(P)H:nitrate oxidoreductase activity","type":"related"},{"name":"assimilatory NAD(P)H-nitrate reductase activity","type":"related"},{"name":"assimilatory nitrate reductase activity","type":"related"},{"name":"nitrate reductase (reduced nicotinamide adenine dinucleotide (phosphate)) activity","type":"related"},{"name":"nitrate reductase NAD(P)H activity","type":"related"},{"name":"nitrate reductase [NAD(P)H2]","type":"related"},{"name":"nitrite:NAD(P)+ oxidoreductase activity","type":"related"}],"termid":"GO:0050463"}


id: PBO:0075533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E13","termid":"PBO:0075533"}


id: GO:1902249
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to IMP, inosine monophosphate.","definition_xrefs":["GOC:TermGenie","PMID:4314233","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide binding","termid":"GO:0032555"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"IMP binding","termid":"GO:1902249"}


id: GO:1902443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ripoptosome assembly involved in a necroptotic process.","definition_xrefs":["GOC:TermGenie","PMID:21052097","GOC:dph","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of ripoptosome assembly involved in necroptotic process","termid":"GO:1902442"},{"relation_name":"negatively_regulates","term_name":"ripoptosome assembly involved in necroptotic process","termid":"GO:1901026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"negative regulation of ripoptosome assembly involved in necroptotic process","synonyms":[{"name":"down regulation of ripoptosome assembly involved in necroptosis","type":"exact"},{"name":"down-regulation of ripoptosome assembly involved in necroptosis","type":"exact"},{"name":"downregulation of ripoptosome assembly involved in necroptosis","type":"exact"},{"name":"inhibition of ripoptosome assembly involved in necroptosis","type":"narrow"},{"name":"negative regulation of ripoptosome assembly involved in necroptosis","type":"narrow"}],"termid":"GO:1902443"}


id: PBO:0086714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; mutant is deficient in cell wall mannosylphosphate and has long chronological lifespan; genetic interactions suggest a role in ER-associated protein degradation (ERAD); SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, while mCherry fusion localizes to just the vacuole","termid":"PBO:0086714"}


id: GO:0061009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the common bile duct over time, from its formation to the mature structure. The common bile duct is formed from the joining of the common hepatic duct running from the liver, and the cystic duct running from the gallbladder. The common bile duct transports bile from the liver and gallbladder to the intestine.","definition_xrefs":["PMID:20614624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"part_of","term_name":"hepaticobiliary system development","termid":"GO:0061008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"common bile duct development","synonyms":[{"name":"CBD development","type":"exact"},{"name":"EHBD development","type":"broad"},{"name":"bile duct development","type":"exact"},{"name":"extrahepatic bile duct development","type":"broad"}],"termid":"GO:0061009"}


id: PBO:0085926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; member of the seripauperin multigene family encoded mainly in subtelomeric regions; SWAT-GFP fusion protein localizes to both the endoplasmic reticulum and vacuole","termid":"PBO:0085926"}


id: GO:0047440
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-dehydro-3-deoxy-D-arabinonate = glycolaldehyde + pyruvate.","definition_xrefs":["RHEA:20609","EC:4.1.2.28"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-dehydro-3-deoxy-D-pentonate aldolase activity","secondary_identifiers":["MetaCyc:4.1.2.28-RXN","KEGG_REACTION:R01782"],"synonyms":[{"name":"2-dehydro-3-deoxy-D-pentonate glycolaldehyde-lyase activity","type":"related"},{"name":"2-keto-3-deoxy-D-pentonate aldolase activity","type":"related"},{"name":"3-deoxy-D-pentulosonic acid aldolase","type":"broad"}],"termid":"GO:0047440"}


id: FYPO:0005037
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of the serine residue at position 5 within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II normal (i.e. indistinguishable from wild type) when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah","GO:0071620","PMID:22144909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during nitrogen starvation","termid":"FYPO:0005035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal phosphorylation of RNA polymerase II C-terminal domain serine 5 residues during nitrogen starvation","synonyms":[{"name":"decreased phosphorylation of RNA polymerase II C-terminal domain serine 5 residues during nitrogen deprivation","type":"exact"},{"name":"decreased phosphorylation of RNA polymerase II CTD serine 5 residues during nitrogen depletion","type":"exact"},{"name":"reduced phosphorylation of RNA polymerase II C-terminal domain serine 5 residues during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005037"}


id: PR:Q9UT70
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A trafficking protein particle complex subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01316","PRO:DNx","PANTHER:PTHR23249:SF9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transport protein particle subunit bet5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G9.16c","secondary_identifiers":["UniProtKB:Q9UT70"],"synonyms":[{"name":"Spom972h-TRAPPC1","type":"exact"}],"termid":"PR:Q9UT70"}


id: PBO:0089121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl peptidase, unknown specificity, implicated in glutathione metabolism","termid":"PBO:0089121"}


id: GO:0034730
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SMN-Sm protein complex formed by the association of the methylated Sm proteins B/B', D1, D2, D3, E, F, and G with the SMN complex.","definition_xrefs":["PMID:17401408","PMID:12975319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SMN-Sm protein complex","termid":"GO:0034719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"SmD-containing SMN-Sm protein complex","synonyms":[{"name":"SMN-containing protein complex","type":"broad"}],"termid":"GO:0034730"}


id: GO:1900761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving averantin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"averantin metabolic process","synonyms":[{"name":"averantin metabolism","type":"exact"}],"termid":"GO:1900761"}


id: PBO:0052585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine rich nucleolar protein 1 pseudogene 3","termid":"PBO:0052585"}


id: GO:0051946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of L-glutamate into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of L-glutamate import across plasma membrane","termid":"GO:0002036"},{"relation_name":"is_a","term_name":"regulation of amino acid uptake involved in synaptic transmission","termid":"GO:0051941"},{"relation_name":"regulates","term_name":"glutamate reuptake","termid":"GO:0051935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of glutamate uptake involved in transmission of nerve impulse","synonyms":[{"name":"regulation of L-glutamate reuptake","type":"exact"},{"name":"regulation of L-glutamate uptake during transmission of nerve impulse","type":"exact"},{"name":"regulation of glutamate reuptake","type":"exact"},{"name":"regulation of glutamate uptake during transmission of nerve impulse","type":"related"},{"name":"regulation of glutamate uptake involved in conduction of nerve impulse","type":"exact"}],"termid":"GO:0051946"}


id: PBO:0047153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 183 member D, pseudogene","termid":"PBO:0047153"}


id: PBO:0044665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dicarbonyl and L-xylulose reductase","termid":"PBO:0044665"}


id: PBO:0067809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 111","termid":"PBO:0067809"}


id: PBO:0061345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 3","termid":"PBO:0061345"}


id: PBO:0072698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUS family member 1","termid":"PBO:0072698"}


id: FYPO:0003028
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patch localization is normal during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actin cortical patch localization","termid":"FYPO:0001294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal actin cortical patch localization during mitosis","synonyms":[{"name":"normal F-actin patch localization during mitosis","type":"exact"},{"name":"normal actin cortical patch localisation during mitosis","type":"exact"},{"name":"normal actin cortical patch localization during mitosis during mitotic cell cycle","type":"related"},{"name":"normal actin cortical patch localization during mitosis during vegetative growth","type":"exact"},{"name":"normal actin cortical patch localization during mitotic M phase","type":"related"},{"name":"normal actin cortical patch localization during mitotic nuclear division","type":"exact"},{"name":"normal actin cortical patch location during mitosis","type":"related"},{"name":"normal actin patch localization during mitosis","type":"exact"}],"termid":"FYPO:0003028"}


id: PBO:0072732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine-1-phosphate receptor 2","termid":"PBO:0072732"}


id: PBO:0027538
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_response_to_S-phase_DNA_damage_checkpoint_signaling","termid":"PBO:0027538"}


id: PBO:0052380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 22","termid":"PBO:0052380"}


id: GO:1902158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to G2 DNA damage checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to DNA damage checkpoint signaling","termid":"GO:1902154"},{"relation_name":"is_a","term_name":"regulation of response to G2 DNA damage checkpoint signaling","termid":"GO:1902157"},{"relation_name":"positively_regulates","term_name":"response to G2 DNA damage checkpoint signaling","termid":"GO:0072426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to G2 DNA damage checkpoint signaling","synonyms":[{"name":"activation of G2/M transition DNA damage checkpoint effector process","type":"exact"},{"name":"activation of response to G2 DNA damage checkpoint signaling","type":"narrow"},{"name":"activation of response to signal involved in G2/M transition DNA damage checkpoint","type":"exact"},{"name":"positive regulation of G2/M transition DNA damage checkpoint effector process","type":"exact"},{"name":"positive regulation of response to signal involved in G2/M transition DNA damage checkpoint","type":"exact"},{"name":"up regulation of G2/M transition DNA damage checkpoint effector process","type":"exact"},{"name":"up regulation of response to G2 DNA damage checkpoint signaling","type":"exact"},{"name":"up regulation of response to signal involved in G2/M transition DNA damage checkpoint","type":"exact"},{"name":"up-regulation of G2/M transition DNA damage checkpoint effector process","type":"exact"},{"name":"up-regulation of response to G2 DNA damage checkpoint signaling","type":"exact"},{"name":"up-regulation of response to signal involved in G2/M transition DNA damage checkpoint","type":"exact"},{"name":"upregulation of G2/M transition DNA damage checkpoint effector process","type":"exact"},{"name":"upregulation of response to G2 DNA damage checkpoint signaling","type":"exact"},{"name":"upregulation of response to signal involved in G2/M transition DNA damage checkpoint","type":"exact"}],"termid":"GO:1902158"}


id: GO:0031264
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed by the association of signaling proteins with a death receptor upon ligand binding. The complex includes procaspases and death domain-containing proteins in addition to the ligand-bound receptor, and may control the activation of caspases 8 and 10.","definition_xrefs":["PMID:12655293","GOC:mtg_apoptosis","PMID:8521815","PMID:12628743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"death-inducing signaling complex","secondary_identifiers":["Wikipedia:Death-inducing_signaling_complex"],"synonyms":[{"name":"DISC","type":"exact"},{"name":"DISC protein complex","type":"exact"},{"name":"death receptor-induced signaling complex","type":"exact"},{"name":"death receptor-induced signalling complex","type":"exact"},{"name":"death-inducing signalling complex","type":"exact"}],"termid":"GO:0031264"}


id: PBO:0009122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-tubulin Gtb1","termid":"PBO:0009122"}


id: PBO:0061785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oncomodulin","termid":"PBO:0061785"}


id: PBO:0002746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMN family protein Yip11","termid":"PBO:0002746"}


id: PBO:0056959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 20b","termid":"PBO:0056959"}


id: FYPO:0006634
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115161,115173,115616],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0001122"},{"annotations":[115390],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which cell length, i.e. the maximum distance between the cell ends, is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"},{"relation_name":"is_a","term_name":"increased cell length","termid":"FYPO:0006633"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null,"SJAG_04312":null,"SJAG_04332":null},"genotype_count":4,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased vegetative cell length","references_by_uniquename":{"PMID:25866389":null,"PMID:27678009":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_04332","SJAG_00266","SJAG_02592","SJAG_04312"],"single_locus_genotype_uniquenames":["atf1delta","sty1delta","pka1delta","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased cell length during vegetative growth","type":"exact"},{"name":"increased vegetative cell length during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006634","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000102":null,"FYECO:0000137":null,"FYPO:0001122":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000003":null}}


id: PR:Q9HGP1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC29B5.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HGP1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C29B5.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29B5.04c","synonyms":[{"name":"Spom972h-SPBC29B5.04c","type":"exact"}],"termid":"PR:Q9HGP1"}


id: PBO:0004222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-end-recognizing protein Ubr1","termid":"PBO:0004222"}


id: GO:0062148
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-gamma-glutamyl-L-propargylglycine + O2 = CO2 + L-gamma-glutamyl-(3R)-L-beta-ethynylserine + succinate.","definition_xrefs":["RHEA:59900","PMID:30867596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"L-gamma-glutamyl-L-propargylglycine hydroxylase activity","termid":"GO:0062148"}


id: GO:0106280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the UDP-N-acetylglucosamine biosynthetic process.","definition_xrefs":["PMID:32579556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of phosphorus metabolic process","termid":"GO:0010562"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of UDP-N-acetylglucosamine biosynthetic process","termid":"GO:0106278"},{"relation_name":"positively_regulates","term_name":"UDP-N-acetylglucosamine biosynthetic process","termid":"GO:0006048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of UDP-N-acetylglucosamine biosynthetic process","synonyms":[{"name":"positive egulation of UDP-N-acetylglucosamine formation","type":"related"},{"name":"positive regulation of UDP-GlcNAc biosynthetic process","type":"related"},{"name":"positive regulation of UDP-N-acetylglucosamine anabolism","type":"related"},{"name":"positive regulation of UDP-N-acetylglucosamine biosynthesis","type":"related"},{"name":"positive regulation of UDP-N-acetylglucosamine synthesis","type":"related"}],"termid":"GO:0106280"}


id: PR:O13987
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mga2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13987"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin and IPT/TIG repeat-containing protein C26H5.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26H5.05","synonyms":[{"name":"Spom972h-mga2","type":"exact"}],"termid":"PR:O13987"}


id: GO:0060269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell migration process in which a follicle cell migrates as part of an epithelial sheet between the nurse cells and the oocyte. At the end of migration, they cover the anterior of the oocyte.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"follicle cell of egg chamber migration","termid":"GO:0007297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"centripetally migrating follicle cell migration","termid":"GO:0060269"}


id: PBO:0079274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 41, pseudogene","termid":"PBO:0079274"}


id: PBO:0074965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-7","termid":"PBO:0074965"}


id: GO:0102490
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 8-oxo-dGTP + 2 H2O = 8-oxo-dGMP + 2 hydrogenphosphate + 2 H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 8-oxo-dGTP phosphohydrolase activity (obsolete GO:0102490)","termid":"GO:0102490"}


id: GO:1905482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any cytoplasmic sequestering of protein that is involved in G2 DNA damage checkpoint.","definition_xrefs":["GO_REF:0000060","PMID:10523629","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic sequestering of protein involved in G2 DNA damage checkpoint (obsolete GO:1905482)","termid":"GO:1905482"}


id: PBO:0084215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homodimeric Zn2Cys6 zinc finger transcription factor; binds to a weak acid response element to induce transcription of PDR12 and FUN34, encoding an acid transporter and a putative ammonia transporter, respectively","termid":"PBO:0084215"}


id: GO:0048931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a glial cell in the posterior lateral line nerve.","definition_xrefs":["PMID:15832385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line nerve glial cell differentiation","termid":"GO:0048895"},{"relation_name":"part_of","term_name":"posterior lateral line nerve development","termid":"GO:0048918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line nerve glial cell differentiation","termid":"GO:0048931"}


id: PBO:0029852
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_heterochromatin_during_vegetative_growth","termid":"PBO:0029852"}


id: MOD:00933
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative - 5-hydro-5-methylimidazol-4-one, arginine methylglyoxal arginine adduct (+54 amu)","definition_xrefs":["Unimod:319#R"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C3-H2-O adduct (+54 amu) of malondialdehyde with lysine or methylglyoxal with arginine.","termid":"MOD:00630"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylglyoxal arginine adduct (+54 amu)","synonyms":[{"name":"Delta:H(2)C(3)O(1)","type":"related"},{"name":"MDA adduct +54","type":"related"}],"termid":"MOD:00933"}


id: GO:0047637
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-diacyl-sn-glycero-3-phospho-(1'-sn-glycerol) + L-alanyl-tRNA(Ala) = 1,2-diacyl-sn-glycero-3-phospho-1'-(3'-O-L-alanyl)-sn-glycerol + tRNA(Ala).","definition_xrefs":["EC:2.3.2.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phosphatidylglycerol alanyltransferase activity","secondary_identifiers":["RHEA:20489","MetaCyc:ALANYLPHOSPHATIDYLGLYCEROL-SYNTHASE-RXN"],"synonyms":[{"name":"alanyl phosphatidylglycerol synthetase activity","type":"exact"}],"termid":"GO:0047637"}


id: GO:0060605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a lumen by hollowing out a solid rod or cord.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube formation","termid":"GO:0035148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tube lumen cavitation","termid":"GO:0060605"}


id: GO:0002611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of plasmacytoid dendritic cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of dendritic cell antigen processing and presentation","termid":"GO:0002605"},{"relation_name":"is_a","term_name":"regulation of plasmacytoid dendritic cell antigen processing and presentation","termid":"GO:0002610"},{"relation_name":"negatively_regulates","term_name":"plasmacytoid dendritic cell antigen processing and presentation","termid":"GO:0002470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of plasmacytoid dendritic cell antigen processing and presentation","synonyms":[{"name":"down regulation of plasmacytoid dendritic cell antigen processing and presentation","type":"exact"},{"name":"down-regulation of plasmacytoid dendritic cell antigen processing and presentation","type":"exact"},{"name":"downregulation of plasmacytoid dendritic cell antigen processing and presentation","type":"exact"},{"name":"inhibition of plasmacytoid dendritic cell antigen processing and presentation","type":"narrow"}],"termid":"GO:0002611"}


id: FYPO:0000989
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115660,115662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"},{"annotations":[115663,115661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004573"}],"single_locus_phenotype":[{"annotations":[115647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004205"},{"annotations":[115424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003727"},{"annotations":[115570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004695"},{"annotations":[115569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002227"},{"annotations":[115648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"},{"annotations":[115379,115377,115378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001327"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of a specific substance measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00426":null,"SJAG_01956":null,"SJAG_02621":null,"SJAG_03118":null,"SJAG_03198":null,"SJAG_03351":null,"SJAG_03575":null,"SJAG_03689":null,"SJAG_04697":null},"genotype_count":8,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03689","SJAG_02621","SJAG_03118"],"name":"altered level of substance in cell","references_by_uniquename":{"PMID:23786411":null,"PMID:25318672":null,"PMID:35226668":null,"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_03351","SJAG_04697","SJAG_03689","SJAG_03575","SJAG_00426","SJAG_01956"],"single_locus_genotype_uniquenames":["apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","dcr1delta","gms1delta"],"synonyms":[{"name":"abnormal level of substance in cell","type":"exact"}],"termid":"FYPO:0000989","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0001327":null,"FYPO:0002227":null,"FYPO:0003727":null,"FYPO:0004205":null,"FYPO:0004573":null,"FYPO:0004695":null,"FYPO:0004982":null,"FYPO_EXT:0000001":null}}


id: PBO:0043181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDGSH iron sulfur domain 1 pseudogene 1","termid":"PBO:0043181"}


id: PBO:0079460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans-golgi network vesicle protein 23 homolog B","termid":"PBO:0079460"}


id: GO:0055007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cardiac muscle precursor cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction.","definition_xrefs":["GOC:mtg_heart","GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiocyte differentiation","termid":"GO:0035051"},{"relation_name":"is_a","term_name":"striated muscle cell differentiation","termid":"GO:0051146"},{"relation_name":"part_of","term_name":"cardiac muscle tissue development","termid":"GO:0048738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle cell differentiation","synonyms":[{"name":"cardiomyocyte differentiation","type":"exact"},{"name":"heart muscle cell differentiation","type":"related"}],"termid":"GO:0055007"}


id: PBO:0069830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1116, pseudogene","termid":"PBO:0069830"}


id: PBO:0090188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar sorting protein Vps68","termid":"PBO:0090188"}


id: GO:0019453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-cysteine, via the intermediate cystine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cysteine catabolic process","termid":"GO:0019448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0006520","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"L-cysteine catabolic process via cystine","synonyms":[{"name":"L-cysteine breakdown via cystine","type":"exact"},{"name":"L-cysteine degradation via cystine","type":"exact"}],"termid":"GO:0019453"}


id: PBO:0039567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 62 pseudogene 1","termid":"PBO:0039567"}


id: PBO:0061633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 15 pseudogene 1","termid":"PBO:0061633"}


id: GO:0009646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an absence of light stimuli.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light intensity","termid":"GO:0009642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to absence of light","synonyms":[{"name":"response to darkness","type":"related"}],"termid":"GO:0009646"}


id: PR:O13882
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrps18 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein S18, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.18c","synonyms":[{"name":"Spom972h-mrps18","type":"exact"}],"termid":"PR:O13882"}


id: GO:0102384
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 19-O-beta-glucopyranosyl-steviol + UDP-alpha-D-glucose = rubusoside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 19-O-beta-glucopyranosyl-steviol glucosyltransferase activity (obsolete GO:0102384)","termid":"GO:0102384"}


id: PR:P87172
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02799","PRO:DNx","PANTHER:PTHR12526:SF37"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol N-acetylglucosaminyltransferase gpi3 subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.07","secondary_identifiers":["UniProtKB:P87172"],"synonyms":[{"name":"GlcNAc-PI synthesis protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PIGA","type":"exact"}],"termid":"PR:P87172"}


id: PBO:0054938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2352","termid":"PBO:0054938"}


id: PBO:0074197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 7","termid":"PBO:0074197"}


id: GO:0002194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a hepatocyte during the development of the liver. Hepatocytes emerge from the hepatic epithelium, populating the septum transversum and lateral mesenchymal areas of the hepatic lobes.","definition_xrefs":["CL:0000182","PMID:9794819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatocyte cell migration","termid":"GO:0002194"}


id: GO:0044407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which microorganisms of the same species attach to and grow in or on a host species, and produce extracellular polymers that facilitate attachment and matrix formation, resulting in a change in the microorganisms' growth rate and gene transcription. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-species biofilm formation","termid":"GO:0044010"},{"relation_name":"is_a","term_name":"adhesion of symbiont to host","termid":"GO:0044406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"single-species biofilm formation in or on host organism","termid":"GO:0044407"}


id: GO:0039708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a virus capsid that occurs in the nucleus. The assembly of large icosahedral shells for herpesviridae and adenoviridae requires structural proteins that act as chaperones for assembly.","definition_xrefs":["VZ:1516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral capsid assembly","termid":"GO:0019069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nuclear capsid assembly","termid":"GO:0039708"}


id: GO:0004013
data:
  {"annotated_genes":["SJAG_03556"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108764],"is_not":false,"summary":null,"term":"GO:0004013"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-homocysteine + H2O = adenosine + L-homocysteine.","definition_xrefs":["RHEA:21708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-sulfur bonds","termid":"GO:0046508"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03556":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"adenosylhomocysteinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5579084","MetaCyc:ADENOSYLHOMOCYSTEINASE-RXN","EC:3.13.2.1","Reactome:R-HSA-174401"],"synonyms":[{"name":"AdoHcyase activity","type":"related"},{"name":"S-adenosyl-L-homocysteine hydrolase activity","type":"related"},{"name":"S-adenosylhomocysteinase activity","type":"related"},{"name":"S-adenosylhomocysteine hydrolase activity","type":"broad"},{"name":"S-adenosylhomocysteine synthase activity","type":"related"},{"name":"SAHase activity","type":"related"},{"name":"adenosylhomocysteine hydrolase activity","type":"related"}],"termid":"GO:0004013","terms_by_termid":{"GO:0004013":null}}


id: PBO:0053064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"large tumor suppressor kinase 1","termid":"PBO:0053064"}


id: PBO:0060456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear apoptosis inducing factor 1","termid":"PBO:0060456"}


id: GO:0007349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The separation of a multi-nucleate cell or syncytium into individual cells. An example of this is found in Drosophila melanogaster embryo development.","definition_xrefs":["GOC:go_curators","GOC:mtg_sensu","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellularization","secondary_identifiers":["GO:0009796"],"termid":"GO:0007349"}


id: GO:0035416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of mitotic prometaphase, the stage following prophase in mitosis (in higher eukaryotes) during which the nuclear envelope is disrupted and breaks into membrane vesicles, and the spindle microtubules enter the nuclear region.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of mitotic prometaphase (obsolete GO:0035416)","synonyms":[{"name":"positive regulation of mitotic prometaphase","type":"exact"}],"termid":"GO:0035416"}


id: FYPO:0007772
data:
  {"alleles_by_uniquename":{"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_03891:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03891","name":"alx1delta","uniquename":"SJAG_03891:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115483,115484,115491,115515,115516,115522,115523,115682],"is_not":false,"summary":null,"term":"FYPO:0007772"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which reformation of the nuclear envelope after mitotic nuclear division begins later than normal.","definition_xrefs":["PMID:32109380","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope organization","termid":"FYPO:0000815"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01242":null,"SJAG_01745":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_05207":null},"genotype_count":5,"genotypes_by_uniquename":{"alx1delta":{"display_name":"alx1delta","display_uniquename":"alx1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03891:allele-1","expression":"Null"}]}]},"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"vps32delta":{"display_name":"vps32delta","display_uniquename":"vps32delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01242:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of mitotic nuclear membrane reassembly","references_by_uniquename":{"PMID:21802294":null,"PMID:32109380":null,"PMID:32243490":null},"single_locus_annotated_genes":["SJAG_03891","SJAG_05207","SJAG_01745","SJAG_01242","SJAG_03892"],"single_locus_genotype_uniquenames":["vps32delta","cmp7delta","alx1delta","vps4delta","lem2delta"],"synonyms":[{"name":"delayed mitotic nuclear membrane reassembly","type":"exact"},{"name":"delayed onset of mitotic nuclear envelope reassembly","type":"related"},{"name":"delayed onset of mitotic nuclear membrane reassembly during mitotic cell cycle","type":"related"},{"name":"delayed onset of mitotic nuclear membrane reassembly during vegetative growth","type":"exact"}],"termid":"FYPO:0007772","terms_by_termid":{"FYPO:0007772":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: SO:0001634
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located within a half KB of the end of a gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"downstream_gene_variant","termid":"SO:0001632"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"500B_downstream_variant","synonyms":[{"name":"500B downstream variant","type":"exact"},{"name":"near-gene-3","type":"exact"}],"termid":"SO:0001634"}


id: PBO:0082312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Assembly factor for F1 sector of mitochondrial F1F0 ATP synthase; conserved protein; required for assembly of alpha and beta subunits into F1 sector of mitochondrial F1F0 ATP synthase; human homolog ATPAF2 can complement yeast atp12 mutant; mutation of human homolog reduces active ATP synthase levels and is associated with the disorder ATPAF2 deficiency","termid":"PBO:0082312"}


id: PATO:0001528
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sound amplitude which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sound quality","termid":"PATO:0001519"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"loud","termid":"PATO:0001528"}


id: PBO:0079356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha 1c","termid":"PBO:0079356"}


id: PR:O74982
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cid2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caffeine-induced death protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.04","synonyms":[{"name":"Spom972h-cid2","type":"exact"}],"termid":"PR:O74982"}


id: GO:0061290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes that contribute to the progression of the metanephric kidney over time. In this pathway, the activated receptor signals via downstream effectors that result in the inhibition of beta-catenin phosphorylation, thereby preventing degradation of beta-catenin. Stabilized beta-catenin can then accumulate and travel to the nucleus to trigger changes in transcription of target genes.","definition_xrefs":["GOC:mtg_kidney_jan10"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in metanephric kidney development (obsolete GO:0061290)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in metanephric kidney development","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in metanephric kidney development","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in metanephric kidney development","type":"exact"}],"termid":"GO:0061290"}


id: PBO:0090114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate phosphatase Inp53","termid":"PBO:0090114"}


id: GO:0045499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Providing the environmental signal that initiates the directed movement of a motile cell or organism towards a lower concentration of that signal.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor ligand activity","termid":"GO:0048018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674","GO:0140677","GO:0098772"],"is_obsolete":false,"name":"chemorepellent activity","synonyms":[{"name":"chemorepellant activity","type":"exact"}],"termid":"GO:0045499"}


id: PBO:0073295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 17","termid":"PBO:0073295"}


id: MOD:00451
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a propanoyl group.","definition_xrefs":["PubMed:12175151","PubMed:11999733","Unimod:58#N-term","PubMed:11857757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"propanoylated residue","termid":"MOD:01894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"alpha-amino propanoylated residue","synonyms":[{"name":"Propionate labeling reagent light form (N-term & K)","type":"related"},{"name":"Propionyl","type":"related"}],"termid":"MOD:00451"}


id: GO:0061695
data:
  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id: PBO:0074720
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id: PBO:0070574
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 40","termid":"PBO:0070574"}


id: GO:0015322
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of an oligopeptide or oligopeptides from one side of a membrane to the other, up the solute's concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete secondary active oligopeptide transmembrane transporter activity (obsolete GO:0015322)","synonyms":[{"name":"oligopeptide porter activity","type":"related"}],"termid":"GO:0015322"}


id: PBO:0063190
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated transcript 2","termid":"PBO:0063190"}


id: PBO:0003405
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein intermediate chain Dic1","termid":"PBO:0003405"}


id: GO:0002572
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id: PBO:0026997
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_DNA_binding_at_PCB","termid":"PBO:0026997"}


id: PBO:0090616
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome maturation factor Ump1","termid":"PBO:0090616"}


id: GO:0033476
data:
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id: PBO:0054392
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1788","termid":"PBO:0054392"}


id: PBO:0060197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 19, oligomeric","termid":"PBO:0060197"}


id: GO:0047356
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ribitol phosphate(n) + CDP-ribitol = ribitol phosphate(n+1) + CMP.","definition_xrefs":["EC:2.7.8.14","MetaCyc:2.7.8.14-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016780"],"is_obsolete":false,"name":"CDP-ribitol ribitolphosphotransferase activity","secondary_identifiers":["RHEA:13353","MetaCyc:RXN-18380"],"synonyms":[{"name":"CDP-ribitol:poly(ribitol phosphate) ribitolphosphotransferase activity","type":"related"},{"name":"CDPribitol ribitolphosphotransferase activity","type":"related"},{"name":"poly(ribitol phosphate) synthetase activity","type":"related"},{"name":"polyribitol phosphate polymerase activity","type":"related"},{"name":"polyribitol phosphate synthetase activity","type":"related"},{"name":"teichoate synthase activity","type":"related"},{"name":"teichoate synthetase activity","type":"related"},{"name":"teichoic-acid synthase activity","type":"broad"}],"termid":"GO:0047356"}


id: GO:0001116
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins, DNA, and RNA molecules to form a protein-DNA-RNA complex.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA-RNA complex organization","termid":"GO:0001115"},{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"protein-DNA-RNA complex assembly","termid":"GO:0001116"}


id: PBO:0045819
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 9","termid":"PBO:0045819"}


id: PBO:0042208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin J","termid":"PBO:0042208"}


id: SO:0002239
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene which codes for 28S_rRNA, which functions as a component of the large subunit of the ribosome in eukaryotes.","direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic_LSU_rRNA_gene","termid":"SO:0002361"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_rRNA_28S_gene","synonyms":[{"name":"28S rRNA gene","type":"exact"},{"name":"28S_rRNA_gene","type":"exact"}],"termid":"SO:0002239"}


id: PBO:0089225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L38","termid":"PBO:0089225"}


id: GO:1901782
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of p-cumate.","definition_xrefs":["GOC:yaf","PMID:8631713","GOC:TermGenie","UniPathway:UPA00937","MetaCyc:PWY-5273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"p-cumate metabolic process","termid":"GO:1901781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"p-cumate catabolic process","synonyms":[{"name":"p-cumate breakdown","type":"exact"},{"name":"p-cumate catabolism","type":"exact"},{"name":"p-cumate degradation","type":"exact"}],"termid":"GO:1901782"}


id: PBO:0113044
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromatin-associated negative regulator of RNA polymerase III assembly; differentially and dynamically occupies RNA polymerase III-transcribed genes; promotes eviction of RNAPIII; occupancy depends on TFIIIB and TFIIIC, not RNAPIII; protein abundance increases in response to DNA replication stress","termid":"PBO:0113044"}


id: PBO:0088053
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-like protein modifier; promotes alternative splicing of SRC1 pre-mRNA; binds non-covalently to the HIND domain of Snu66, may function in modification of Sph1p and Hbt1p, functionally complemented by the human or S. pombe ortholog; mechanism of Hub1p adduct formation not yet clear","termid":"PBO:0088053"}


id: PBO:0083167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps verified ORF PAD1/YDR538W","termid":"PBO:0083167"}


id: FYPO:0000121
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ascospore formation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process phenotype","termid":"FYPO:0000679"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle process","termid":"FYPO:0002739"}],"gene_count":0,"genotype_count":0,"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"abnormal sporulation","synonyms":[{"name":"abnormal ascospore formation","type":"exact"},{"name":"sporulation defects","type":"exact"},{"name":"sporulation: abnormal","type":"related"}],"termid":"FYPO:0000121"}


id: PR:000050562
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 2 subunit alpha (Schizosaccharomyces pombe) that has been phosphorylated at the position equivalent to Ser-52 of the amino acid sequence represented by UniProtKB:P56286. UniProtKB:P56286, Ser-52, MOD:00046.","definition_xrefs":["PomBase:VW","PRO:DAN","PMID:28771613"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eukaryotic translation initiation factor 2 subunit alpha (Schizosaccharomyces pombe)","termid":"PR:000050560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tif211/Phos(S52)","pombase_gene_id":"SPAC3G9.09c","synonyms":[{"name":"tif211/Phos(S52)","type":"exact"},{"name":"PomBase_original_PRO_term_name: eukaryotic translation initiation factor 2 subunit alpha phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-EIF2S1/Phos:1","type":"exact"},{"name":"UniProtKB:P56286, Ser-52, MOD:00046","type":"exact"},{"name":"UniProtKB:P56286-1, Ser-52, MOD:00046","type":"narrow"}],"termid":"PR:000050562"}


id: GO:2000043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac cell fate specification.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate specification","termid":"GO:0042659"},{"relation_name":"is_a","term_name":"regulation of cardiocyte differentiation","termid":"GO:1905207"},{"relation_name":"regulates","term_name":"cardiac cell fate specification","termid":"GO:0060912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac cell fate specification","termid":"GO:2000043"}


id: GO:1903765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of potassium ion export across the plasma membrane.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GO_REF:0000058","GOC:rl","PMID:19646991","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of potassium ion transmembrane transport","termid":"GO:1901380"},{"relation_name":"is_a","term_name":"regulation of potassium ion export across plasma membrane","termid":"GO:1903764"},{"relation_name":"negatively_regulates","term_name":"potassium ion export across plasma membrane","termid":"GO:0097623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of potassium ion export across plasma membrane","secondary_identifiers":["GO:1902303"],"synonyms":[{"name":"down regulation of potassium export","type":"broad"},{"name":"down regulation of potassium ion export","type":"broad"},{"name":"down regulation of potassium ion export across plasma membrane","type":"exact"},{"name":"down-regulation of potassium export","type":"broad"},{"name":"down-regulation of potassium ion export","type":"broad"},{"name":"down-regulation of potassium ion export across plasma membrane","type":"exact"},{"name":"downregulation of potassium export","type":"broad"},{"name":"downregulation of potassium ion export","type":"broad"},{"name":"downregulation of potassium ion export across plasma membrane","type":"exact"},{"name":"inhibition of potassium export","type":"narrow"},{"name":"inhibition of potassium ion export","type":"related"},{"name":"inhibition of potassium ion export across plasma membrane","type":"exact"},{"name":"negative regulation of potassium export","type":"broad"},{"name":"negative regulation of potassium ion export","type":"broad"}],"termid":"GO:1903765"}


id: PBO:0025481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluoride channel Fex2","termid":"PBO:0025481"}


id: PBO:0046062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF3J pseudogene 1","termid":"PBO:0046062"}


id: GO:0039594
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any endoribonuclease activity that contributes to the viral-induced catabolism of host mRNA.","definition_xrefs":["GOC:bf","PMID:22046136"],"gene_count":0,"genotype_count":0,"name":"obsolete endoribonuclease activity involved in viral induction of host mRNA catabolic process (obsolete GO:0039594)","termid":"GO:0039594"}


id: GO:0043575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell is received and converted into a molecular signal.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to osmotic stress","termid":"GO:0006970"},{"relation_name":"is_a","term_name":"detection of abiotic stimulus","termid":"GO:0009582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of osmotic stimulus","termid":"GO:0043575"}


id: PBO:0038300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kegg_pathway","termid":"PBO:0038300"}


id: GO:0043591
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The structures that lie outside the inner membrane and surround the entire endospore; consists of a peptidoglycan-containing inner layer (the endospore cortex) surrounded by a multilayered proteinaceous coat. An exosporium may be present as an extreme outer layer.","definition_xrefs":["GOC:go_curators","PMID:15035041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore wall","termid":"GO:0031160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"endospore external encapsulating structure","secondary_identifiers":["GO:0055030"],"synonyms":[{"name":"endospore wall","type":"exact"},{"name":"peptidoglycan-based spore wall","type":"exact"},{"name":"spore wall","type":"broad"}],"termid":"GO:0043591"}


id: PBO:0080480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vault RNA 3-1, pseudogene","termid":"PBO:0080480"}


id: GO:0099031
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic density membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of postsynaptic density membrane (obsolete GO:0099031)","termid":"GO:0099031"}


id: PBO:0049921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HFE antisense RNA 1","termid":"PBO:0049921"}


id: GO:0045767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of anti-apoptosis.","definition_xrefs":["GOC:mtg_apoptosis","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of anti-apoptosis (obsolete GO:0045767)","synonyms":[{"name":"regulation of anti-apoptosis","type":"exact"}],"termid":"GO:0045767"}


id: FYPO:0001565
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-threonine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular threonine level","synonyms":[{"name":"increased cellular L-threonine level","type":"exact"},{"name":"increased cellular threonine level during mitotic cell cycle","type":"related"},{"name":"increased cellular threonine level during vegetative growth","type":"exact"},{"name":"increased threonine accumulation","type":"related"}],"termid":"FYPO:0001565"}


id: PBO:0091385
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAs-Like","termid":"PBO:0091385"}


id: PBO:0058035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4256","termid":"PBO:0058035"}


id: PBO:0066567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid 5 homolog 2","termid":"PBO:0066567"}


id: PBO:0072200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 17","termid":"PBO:0072200"}


id: PBO:0048963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein IX platelet","termid":"PBO:0048963"}


id: PBO:0082713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the mitotic exit network; associates with and is required for the activation and Cdc15p-dependent phosphorylation of the Dbf2p kinase; required for cytokinesis and cell separation; component of the CCR4 transcriptional complex; relocalizes from cytoplasm to the nuclear periphery upon DNA replication stress","termid":"PBO:0082713"}


id: GO:2000517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T-helper 1 cell activation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of CD4-positive, alpha-beta T cell activation","termid":"GO:2000514"},{"relation_name":"regulates","term_name":"T-helper 1 cell activation","termid":"GO:0035711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T-helper 1 cell activation","synonyms":[{"name":"regulation of Th1 cell activation","type":"exact"}],"termid":"GO:2000517"}


id: GO:2000546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endothelial cell chemotaxis to fibroblast growth factor.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell chemotaxis to fibroblast growth factor","termid":"GO:1904849"},{"relation_name":"is_a","term_name":"regulation of endothelial cell chemotaxis to fibroblast growth factor","termid":"GO:2000544"},{"relation_name":"is_a","term_name":"positive regulation of endothelial cell chemotaxis","termid":"GO:2001028"},{"relation_name":"positively_regulates","term_name":"endothelial cell chemotaxis to fibroblast growth factor","termid":"GO:0035768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endothelial cell chemotaxis to fibroblast growth factor","termid":"GO:2000546"}


id: PBO:0079177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 6, pseudogene","termid":"PBO:0079177"}


id: PBO:0045607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 18 (pseudogene)","termid":"PBO:0045607"}


id: PR:O13869
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding protein GUF1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02049","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation factor guf1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.04c","secondary_identifiers":["UniProtKB:O13869"],"synonyms":[{"name":"EF-4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GTPase guf1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GUF1","type":"exact"},{"name":"elongation factor 4 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ribosomal back-translocase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13869"}


id: PBO:0049236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate metabotropic receptor 7","termid":"PBO:0049236"}


id: GO:0051963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synapse assembly, the aggregation, arrangement and bonding together of a set of components to form a synapse.","definition_xrefs":["GOC:pr","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse organization","termid":"GO:0050807"},{"relation_name":"is_a","term_name":"regulation of cell junction assembly","termid":"GO:1901888"},{"relation_name":"regulates","term_name":"synapse assembly","termid":"GO:0007416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of synapse assembly","synonyms":[{"name":"regulation of synapse biogenesis","type":"exact"},{"name":"regulation of synaptogenesis","type":"exact"}],"termid":"GO:0051963"}


id: PBO:0011428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial NAD transmembrane transporter (predicted)","termid":"PBO:0011428"}


id: GO:0021573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of rhombomere 7 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GO_REF:0000021","GOC:jid","GOC:cls","GOC:curators","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 7 development","termid":"GO:0021573"}


id: PBO:0083379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps ALT2/YDR111C; null mutant displays increased levels of spontaneous Rad52p foci","termid":"PBO:0083379"}


id: PBO:0002809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rer1 family protein (predicted)","termid":"PBO:0002809"}


id: PBO:0059802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 28","termid":"PBO:0059802"}


id: PBO:0017602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP cyclohydrolase Rib1 (predicted)","termid":"PBO:0017602"}


id: FYPO:0000619
data:
  {"alleles_by_uniquename":{"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115630],"is_not":false,"summary":null,"term":"FYPO:0000619"}],"single_locus_phenotype":[{"annotations":[115631],"is_not":false,"summary":null,"term":"FYPO:0000619"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested in anaphase under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic M phase","termid":"FYPO:0000608"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00871":null,"SJAG_04284":null,"SJAG_04464":null},"genotype_count":2,"genotypes_by_uniquename":{"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut3-T19E(aa) pim1-R152C(aa)","display_uniquename":"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00871:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_00871","SJAG_04464"],"name":"abnormal cell cycle arrest in mitotic anaphase","references_by_uniquename":{"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_04284"],"single_locus_genotype_uniquenames":["nup61delta"],"synonyms":[{"name":"abnormal cell cycle arrest in anaphase during mitotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic anaphase during vegetative growth","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic anaphase with condensed chromosomes","type":"exact"},{"name":"abnormal mitotic cell cycle arrest in anaphase","type":"exact"},{"name":"mitotic cell cycle progression in late anaphase: arrested","type":"narrow"}],"termid":"FYPO:0000619","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000619":null,"FYPO_EXT:0000001":null}}


id: FYPO:0006569
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which DNA repair is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"},{"relation_name":"is_a","term_name":"normal cellular response to stress during vegetative growth","termid":"FYPO:0000968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000298","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal DNA repair","synonyms":[{"name":"normal DNA repair during mitotic cell cycle","type":"related"},{"name":"normal DNA repair during vegetative growth","type":"exact"}],"termid":"FYPO:0006569"}


id: PBO:0091897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, probably longer, possible ght6 antisense","termid":"PBO:0091897"}


id: PBO:0060703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A5","termid":"PBO:0060703"}


id: GO:0060610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a mammary gland mesenchymal cell. Mammary gland mesenchymal cells form a loosely connected network of cells that surround the mammary ducts.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell differentiation","termid":"GO:0048762"},{"relation_name":"part_of","term_name":"mammary gland development","termid":"GO:0030879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell differentiation involved in mammary gland development","synonyms":[{"name":"mammary gland mesenchymal cell differentiation","type":"exact"}],"termid":"GO:0060610"}


id: PBO:0051647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine monophosphate dehydrogenase 1 pseudogene 2","termid":"PBO:0051647"}


id: PBO:0086126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for function of the Sit4p protein phosphatase; member of a family of similar proteins that form complexes with Sit4p, including Sap155p, Sap185p, and Sap190p; SAP4 has a paralog, SAP155, that arose from the whole genome duplication","termid":"PBO:0086126"}


id: GO:2000980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of inner ear receptor cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mechanoreceptor differentiation","termid":"GO:0045631"},{"relation_name":"regulates","term_name":"inner ear receptor cell differentiation","termid":"GO:0060113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of inner ear receptor cell differentiation","synonyms":[{"name":"regulation of inner ear hair cell differentiation","type":"exact"}],"termid":"GO:2000980"}


id: PBO:0058408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4777","termid":"PBO:0058408"}


id: PR:Q9HDT9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB2B2.18 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDT9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0768 protein PB2B2.18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.18","synonyms":[{"name":"Spom972h-SPBPB2B2.18","type":"exact"}],"termid":"PR:Q9HDT9"}


id: PBO:0076407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 4b","termid":"PBO:0076407"}


id: PBO:0083087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding protein of the mitochondria; involved in repair of mitochondrial DNA; has ATPase activity and binds to DNA mismatches; has homology to E. coli MutS; transcription is induced during meiosis","termid":"PBO:0083087"}


id: GO:0009086
data:
  {"annotated_genes":["SJAG_00395","SJAG_03614","SJAG_00419","SJAG_00234","SJAG_04042","SJAG_02293","SJAG_03102","SJAG_01466","SJAG_04953","SJAG_03152","SJAG_02290","SJAG_04425","SJAG_02689","SJAG_00309","SJAG_03881","SJAG_00881","SJAG_01404","SJAG_04459","SJAG_03712","SJAG_02972","SJAG_03671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86091,92705,94472,94588,98792,99662,102036,107149,108028,111851],"is_not":false,"summary":null,"term":"GO:0009086"},{"annotations":[106559,64692,107147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071266"},{"annotations":[96729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"},{"annotations":[99661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019281"},{"annotations":[110002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019279"},{"annotations":[106561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019283"},{"annotations":[91627,96062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990355"},{"annotations":[108490,96715,88705,85843,95074,103057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019509"},{"annotations":[103058,95075,88706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019284"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid biosynthetic process","termid":"GO:0000097"},{"relation_name":"is_a","term_name":"methionine metabolic process","termid":"GO:0006555"},{"relation_name":"is_a","term_name":"aspartate family amino acid biosynthetic process","termid":"GO:0009067"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00234":null,"SJAG_00309":null,"SJAG_00395":null,"SJAG_00419":null,"SJAG_00881":null,"SJAG_01404":null,"SJAG_01466":null,"SJAG_02290":null,"SJAG_02293":null,"SJAG_02689":null,"SJAG_02972":null,"SJAG_03102":null,"SJAG_03152":null,"SJAG_03614":null,"SJAG_03671":null,"SJAG_03712":null,"SJAG_03881":null,"SJAG_04042":null,"SJAG_04425":null,"SJAG_04459":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006790","GO:0006520"],"is_obsolete":false,"name":"methionine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"methionine anabolism","type":"exact"},{"name":"methionine biosynthesis","type":"exact"},{"name":"methionine formation","type":"exact"},{"name":"methionine synthesis","type":"exact"}],"termid":"GO:0009086","terms_by_termid":{"GO:0009086":null,"GO:0019279":null,"GO:0019280":null,"GO:0019281":null,"GO:0019283":null,"GO:0019284":null,"GO:0019509":null,"GO:0071266":null,"GO:1990355":null}}


id: SO:0000833
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"},{"relation_name":"part_of","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_region","synonyms":[{"name":"transcript region","type":"exact"}],"termid":"SO:0000833"}


id: FYPO:0001530
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of GTPase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"abnormal GTPase activity","termid":"FYPO:0001530"}


id: PBO:0055214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2640","termid":"PBO:0055214"}


id: PBO:0039338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaline phosphatase, placental","termid":"PBO:0039338"}


id: PBO:0030368
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_origin_firing_efficiency","termid":"PBO:0030368"}


id: GO:0140997
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a phosphate group to a histone H4.","definition_xrefs":["PMID:25303536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone kinase activity","termid":"GO:0035173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0004672","GO:0016301","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"histone H4 kinase activity","termid":"GO:0140997"}


id: PR:O14105
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC31G5.05c gene.","definition_xrefs":["UniProtKB:O14105","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribulose-phosphate 3-epimerase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.05c","synonyms":[{"name":"PPE (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RPE (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC31G5.05c","type":"exact"},{"name":"pentose-5-phosphate 3-epimerase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14105"}


id: GO:0061246
data:
  {"annotated_genes":["SJAG_00845","SJAG_00333","SJAG_00236","SJAG_01799","SJAG_03637","SJAG_00661","SJAG_03581","SJAG_00596","SJAG_02022","SJAG_04461"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100586],"is_not":false,"summary":null,"term":"GO:0061246"},{"annotations":[99767,96235,101402,89797],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2000247"},{"annotations":[99768],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0061361"},{"annotations":[109115,100590,101405,87191,91726,114848,90642,96238],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000100"}]},"cv_name":"biological_process","definition":"Any cellular process that results in the specification, formation or maintenance of a bipolar intracellular organization or cell growth patterns that regulates the shaping of a cell.","definition_xrefs":["GOC:vw","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of bipolar cell polarity","termid":"GO:0061245"},{"relation_name":"is_a","term_name":"establishment or maintenance of cell polarity regulating cell shape","termid":"GO:0071963"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00236":null,"SJAG_00333":null,"SJAG_00596":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_01799":null,"SJAG_02022":null,"SJAG_03581":null,"SJAG_03637":null,"SJAG_04461":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment or maintenance of bipolar cell polarity regulating cell shape","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061246","terms_by_termid":{"GO:0061246":null,"GO:0061361":null,"GO:2000100":null,"GO:2000247":null}}


id: PBO:0070346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 19","termid":"PBO:0070346"}


id: PR:O94462
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- puf3 gene.","definition_xrefs":["UniProtKB:O94462","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA-binding protein puf3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.22c","synonyms":[{"name":"Spom972h-puf3","type":"exact"},{"name":"pumilio homology domain family member 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94462"}


id: GO:0046097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of deoxyuridine, 2-deoxyribosyluracil, one of the four major nucleosides of DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyuridine metabolic process","termid":"GO:0046096"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside biosynthetic process","termid":"GO:0046126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"deoxyuridine biosynthetic process","synonyms":[{"name":"deoxyuridine anabolism","type":"exact"},{"name":"deoxyuridine biosynthesis","type":"exact"},{"name":"deoxyuridine formation","type":"exact"},{"name":"deoxyuridine synthesis","type":"exact"}],"termid":"GO:0046097"}


id: PR:O14065
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC962.01 gene.","definition_xrefs":["UniProtKB:O14065","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C962.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC962.01","synonyms":[{"name":"Spom972h-SPCC962.01","type":"exact"}],"termid":"PR:O14065"}


id: PBO:0088722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA demethylase","termid":"PBO:0088722"}


id: PBO:0044081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centriolar satellite-associated tubulin polyglutamylase complex regulator 1","termid":"PBO:0044081"}


id: PBO:0004151
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Xeroderma pigmentosum","termid":"PBO:0004151"}


id: PBO:0027877
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_nucleosome_binding","termid":"PBO:0027877"}


id: GO:0042880
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of D-glucuronate, the D-enantiomer of glucuronate, from one side of a membrane to the other.","definition_xrefs":["ISBN:0198506732","GOC:jsg","GOC:jl","ISBN:0815340729","GOC:mtg_transport","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronate transmembrane transporter activity","termid":"GO:0015135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"D-glucuronate transmembrane transporter activity","termid":"GO:0042880"}


id: GO:1905033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of membrane repolarization during cardiac muscle cell action potential.","definition_xrefs":["GO_REF:0000058","GOC:rph","PMID:23157812","GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:BHF_miRNA","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of membrane repolarization during cardiac muscle cell action potential","termid":"GO:1905031"},{"relation_name":"positively_regulates","term_name":"membrane repolarization during cardiac muscle cell action potential","termid":"GO:0086013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of membrane repolarization during cardiac muscle cell action potential","synonyms":[{"name":"activation of membrane repolarization during cardiac muscle cell action potential","type":"narrow"},{"name":"up regulation of membrane repolarization during cardiac muscle cell action potential","type":"exact"},{"name":"up-regulation of membrane repolarization during cardiac muscle cell action potential","type":"exact"},{"name":"upregulation of membrane repolarization during cardiac muscle cell action potential","type":"exact"}],"termid":"GO:1905033"}


id: PBO:0060777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B8 pseudogene 3","termid":"PBO:0060777"}


id: GO:0071059
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha6-beta1 integrin complex bound to the tetraspanin CD151.","definition_xrefs":["PMID:11884516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alpha6-beta1 integrin-CD151 complex","synonyms":[{"name":"ITGA6-ITGB1-CD151 complex","type":"narrow"}],"termid":"GO:0071059"}


id: PBO:0047869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(2)(q33)","termid":"PBO:0047869"}


id: GO:0098962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neurotransmitter receptor activity involved in synaptic transmission. Modulation may be via an effect on ligand affinity, or effector function such as ion selectivity or pore opening/closing in ionotropic receptors.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nervous system process","termid":"GO:0031644"},{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"is_a","term_name":"regulation of neurotransmitter receptor activity","termid":"GO:0099601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of postsynaptic neurotransmitter receptor activity","termid":"GO:0098962"}


id: GO:0097752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the stability of DNA.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of DNA stability","termid":"GO:0097752"}


id: GO:0042187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of p-xylene (1,4-dimethylbenzene), a colorless, liquid aromatic hydrocarbon.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"p-xylene metabolic process","termid":"GO:0018951"},{"relation_name":"is_a","term_name":"xylene catabolic process","termid":"GO:0042184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"p-xylene catabolic process","synonyms":[{"name":"p-xylene breakdown","type":"exact"},{"name":"p-xylene catabolism","type":"exact"},{"name":"p-xylene degradation","type":"exact"},{"name":"para-xylene catabolic process","type":"exact"},{"name":"para-xylene catabolism","type":"exact"}],"termid":"GO:0042187"}


id: PBO:0044253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CWF19 like cell cycle control factor 1","termid":"PBO:0044253"}


id: PBO:0038926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor L1","termid":"PBO:0038926"}


id: PBO:0050376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3","termid":"PBO:0050376"}


id: PBO:0053184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LENG8 antisense RNA 1","termid":"PBO:0053184"}


id: GO:0004683
data:
  {"annotated_genes":["SJAG_03486","SJAG_02858","SJAG_04287","SJAG_01855","SJAG_02249"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72350,74120,89620,97057,112564],"is_not":false,"summary":null,"term":"GO:0004683"}]},"cv_name":"molecular_function","definition":"Calmodulin-dependent catalysis of the reactions: ATP + a protein serine = ADP + protein serine phosphate; and ATP + a protein threonine = ADP + protein threonine phosphate. This activity require the presence of calcium-bound calmodulin.","definition_xrefs":["PMID:11264466","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01855":null,"SJAG_02249":null,"SJAG_02858":null,"SJAG_03486":null,"SJAG_04287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0003674","GO:0016740","GO:0016301","GO:0004672"],"is_obsolete":false,"name":"calcium/calmodulin-dependent protein kinase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9006992","Reactome:R-HSA-9618750","EC:2.7.11.17","Reactome:R-HSA-416320","Reactome:R-HSA-111915","Reactome:R-HSA-9619478","GO:0004685","GO:0004688","Reactome:R-HSA-9617583","Reactome:R-HSA-9619125","Reactome:R-HSA-111912","Reactome:R-HSA-9619355","Reactome:R-HSA-9619367","Reactome:R-HSA-442749","Reactome:R-HSA-9619783","GO:0004684"],"synonyms":[{"name":"ATP:caldesmon O-phosphotransferase activity","type":"narrow"},{"name":"ATP:protein phosphotransferase (Ca2+/calmodulin-dependent) activity","type":"related"},{"name":"CAM PKII","type":"related"},{"name":"Ca2+/CaM-dependent kinase activity","type":"exact"},{"name":"Ca2+/calmodulin-dependent microtubule-associated protein 2 kinase activity","type":"narrow"},{"name":"Ca2+/calmodulin-dependent protein kinase 1 activity","type":"narrow"},{"name":"Ca2+/calmodulin-dependent protein kinase II activity","type":"narrow"},{"name":"Ca2+/calmodulin-dependent protein kinase IV activity","type":"narrow"},{"name":"Ca2+/calmodulin-dependent protein kinase activity","type":"related"},{"name":"Ca2+/calmodulin-dependent protein kinase kinase activity","type":"narrow"},{"name":"Ca2+/calmodulin-dependent protein kinase kinase beta activity","type":"narrow"},{"name":"CaM kinase II activity","type":"narrow"},{"name":"CaM kinase activity","type":"related"},{"name":"CaM-regulated serine/threonine kinase activity","type":"related"},{"name":"CaMKI","type":"related"},{"name":"CaMKII","type":"related"},{"name":"CaMKIV","type":"related"},{"name":"CaMKKalpha","type":"related"},{"name":"CaMKKbeta","type":"related"},{"name":"STK20","type":"related"},{"name":"calcium- and calmodulin-dependent protein kinase activity","type":"exact"},{"name":"calcium/calmodulin-dependent protein kinase type II activity","type":"narrow"},{"name":"caldesmon kinase (phosphorylating) activity","type":"narrow"},{"name":"calmodulin regulated protein kinase activity","type":"exact"},{"name":"calmodulin-dependent kinase II activity","type":"narrow"},{"name":"calmodulin-dependent protein kinase I activity","type":"narrow"},{"name":"calmodulin-dependent protein kinase activity","type":"exact"},{"name":"microtubule-associated protein 2 kinase activity","type":"related"},{"name":"multifunctional calcium- and calmodulin-regulated protein kinase activity","type":"related"},{"name":"multifunctional calcium/calmodulin regulated protein kinase activity","type":"related"}],"termid":"GO:0004683","terms_by_termid":{"GO:0004683":null}}


id: RO:0002625
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"parasitized_by","termid":"RO:0002445"},{"relation_name":"is_a","term_name":"visited_by","termid":"RO:0002619"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_eggs_laid_in_by","termid":"RO:0002625"}


id: PBO:0049159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 4 pseudogene 1","termid":"PBO:0049159"}


id: PBO:0001118
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human RNF4","termid":"PBO:0001118"}


id: PBO:0067848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 150","termid":"PBO:0067848"}


id: PBO:0027602
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_secondary_cell_septum_thickness","termid":"PBO:0027602"}


id: SO:0001848
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A core promoter element that has the consensus sequence CAGTCACA (or its inverted form TGTGACTG), and plays the role of a TATA box in promoters that do not contain a canonical TATA sequence.","definition_xrefs":["PMID:7501449","PMID:21673110","PMID:8458332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homol_D_box","synonyms":[{"name":"homoID","type":"exact"},{"name":"homol D box","type":"exact"}],"termid":"SO:0001848"}


id: PBO:0080861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yip1 domain family member 2","termid":"PBO:0080861"}


id: GO:2000779
data:
  {"annotated_genes":["SJAG_03048","SJAG_01205","SJAG_00369","SJAG_03417","SJAG_00823"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86968,102623],"is_not":false,"summary":null,"term":"GO:2000779"},{"annotations":[98427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001033"},{"annotations":[103459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001034"},{"annotations":[105368],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010569"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of double-strand break repair.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA repair","termid":"GO:0006282"},{"relation_name":"regulates","term_name":"double-strand break repair","termid":"GO:0006302"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00369":null,"SJAG_00823":null,"SJAG_01205":null,"SJAG_03048":null,"SJAG_03417":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"regulation of double-strand break repair","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000779","terms_by_termid":{"GO:0010569":null,"GO:2000779":null,"GO:2001033":null,"GO:2001034":null}}


id: GO:0000961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving catabolism in the mitochondrion of RNA transcribed from the mitochondrial genome.","definition_xrefs":["GOC:mah","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial RNA catabolic process","termid":"GO:0000960"},{"relation_name":"is_a","term_name":"negative regulation of RNA catabolic process","termid":"GO:1902369"},{"relation_name":"negatively_regulates","term_name":"mitochondrial RNA catabolic process","termid":"GO:0000957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitochondrial RNA catabolic process","termid":"GO:0000961"}


id: GO:0015568
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-idonate from one side of a membrane to the other. L-idonate is an aldonic acid derived from L-idose, an aldohexose which is epimeric with D-glucose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"aldonate transmembrane transporter activity","termid":"GO:0042879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"L-idonate transmembrane transporter activity","synonyms":[{"name":"L-idonate/D-gluconate:hydrogen symporter activity","type":"narrow"}],"termid":"GO:0015568"}


id: RO:0002410
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"This relation groups causal relations between material entities and causal relations between processes","direct_ancestors":[{"relation_name":"is_a","term_name":"related_via_dependence_to","termid":"RO:0002609"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_related_to","termid":"RO:0002410"}


id: PBO:0047161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 187 member A","termid":"PBO:0047161"}


id: GO:1990492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A Mad2-dependent mitotic cell cycle checkpoint which delays cytokinetic actinomycin ring assembly if there is a delay in early M-phase.","definition_xrefs":["PMID:12186944"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic cell cycle checkpoint inhibiting CAR assembly (obsolete GO:1990492)","synonyms":[{"name":"Mad2-dependent mitotic cell cycle checkpoint","type":"related"},{"name":"mitotic cell cycle checkpoint inhibiting cytokinetic actomyosin ring assembly","type":"exact"}],"termid":"GO:1990492"}


id: GO:0050420
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 alpha-D-glucose 1-phosphate = maltose + 2 phosphate.","definition_xrefs":["EC:2.4.1.139","MetaCyc:MALTOSE-SYNTHASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"maltose synthase activity","secondary_identifiers":["RHEA:22320"],"synonyms":[{"name":"alpha-D-glucose-1-phosphate:alpha-D-glucose-1-phosphate 4-alpha-D-glucosyltransferase (dephosphorylating)","type":"related"}],"termid":"GO:0050420"}


id: GO:0045462
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the 3-O-acetylation of a trichothecene. Trichothecenes are sesquiterpene epoxide mycotoxins that act as potent inhibitors of eukaryotic protein synthesis.","definition_xrefs":["PMID:10583973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"trichothecene 3-O-acetyltransferase activity","termid":"GO:0045462"}


id: GO:0036221
data:
  {"annotated_genes":["SJAG_01651"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93172],"is_not":false,"summary":null,"term":"GO:0036221"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: UTP + H2O = UMP + H+ + diphosphate.","definition_xrefs":["RHEA:29395","GOC:dgf","PMID:17899088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01651":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0047429"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0047429","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"UTP diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00662"],"synonyms":[{"name":"uridine triphosphate pyrophosphohydrolase activity","type":"exact"}],"termid":"GO:0036221","terms_by_termid":{"GO:0036221":null}}


id: PBO:0046751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 5 pseudogene 1","termid":"PBO:0046751"}


id: PR:Q9P6S0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mucin-22 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell agglutination protein 1742.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1742.01","secondary_identifiers":["UniProtKB:Q9P6S0"],"synonyms":[{"name":"Spom972h-MUC22","type":"exact"}],"termid":"PR:Q9P6S0"}


id: PBO:0051831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon regulatory factor 5 pseudogene 1","termid":"PBO:0051831"}


id: GO:0034880
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: citrazinate + H2O = 2,3,6-trihydroxyisonicotinate + 2 H+ + 2 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete citrazinate dehydrogenase activity (obsolete GO:0034880)","termid":"GO:0034880"}


id: PR:P87168
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trz2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease Z 2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.03c","synonyms":[{"name":"RNase Z 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-trz2","type":"exact"},{"name":"tRNA 3 endonuclease 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNase Z 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87168"}


id: PBO:0082352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-NADH kinase; phosphorylates both NAD and NADH; homooctameric structure consisting of 60-kDa subunits; similar to Pos5p; overexpression complements certain pos5 phenotypes; YEF1 has a paralog, UTR1, that arose from the whole genome duplication","termid":"PBO:0082352"}


id: PBO:0048626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GIPC PDZ domain containing family member 2","termid":"PBO:0048626"}


id: GO:0030706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which one relatively unspecialized immature cystocyte of the germ-line cyst in the germarium acquires the specialized features of an oocyte. An example of this process can be found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oocyte differentiation","termid":"GO:0009994"},{"relation_name":"part_of","term_name":"germarium-derived egg chamber formation","termid":"GO:0007293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germarium-derived oocyte differentiation","synonyms":[{"name":"oocyte cell differentiation","type":"related"}],"termid":"GO:0030706"}


id: PBO:0085114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleocytoplasmic shuttling assembly chaperone; co-translationally associates with nascent Rps3p in the cytoplasm and delivers it to pre-ribosomal subunits in the nucleus; required for 40S ribosomal subunit nuclear export, biogenesis and adaptation to osmotic and oxidative stress;  contains ankyrin-repeats; expression repressed by heat shock","termid":"PBO:0085114"}


id: GO:1904217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of CDP-diacylglycerol-serine O-phosphatidyltransferase activity.","definition_xrefs":["GOC:TermGenie","GOC:rl","GO_REF:0000059","PMID:16120614","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of CDP-diacylglycerol-serine O-phosphatidyltransferase activity","synonyms":[{"name":"regulation of CDP-diacylglycerol-L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"regulation of CDP-diacylglycerol:L-serine 3-O-phosphatidyltransferase activity","type":"exact"},{"name":"regulation of CDP-diglyceride-L-serine phosphatidyltransferase activity","type":"exact"},{"name":"regulation of CDP-diglyceride:serine phosphatidyltransferase activity","type":"exact"},{"name":"regulation of CDP-diglycerine-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"regulation of CDPdiacylglycerol-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"regulation of CDPdiglyceride-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"regulation of PS synthase activity","type":"exact"},{"name":"regulation of cytidine 5'-diphospho-1,2-diacyl-sn-glycerol (CDPdiglyceride):L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"regulation of cytidine 5'-diphospho-1,2-diacyl-sn-glycerol:L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"regulation of cytidine diphosphoglyceride-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"regulation of phosphatidylserine synthase activity","type":"exact"},{"name":"regulation of phosphatidylserine synthetase activity","type":"exact"},{"name":"regulation of serine exchange enzyme","type":"broad"}],"termid":"GO:1904217"}


id: FYPO:0004950
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell is elongated, and the nucleus is longer than normal and undergoes oscillatory movement.","definition_xrefs":["PomBase:mah","PomBase:vw","PMID:16611238"],"direct_ancestors":[{"relation_name":"has_part","term_name":"elongated nucleus during vegetative growth","termid":"FYPO:0000832"},{"relation_name":"is_a","term_name":"elongated nucleus during vegetative growth","termid":"FYPO:0000832"},{"relation_name":"is_a","term_name":"elongated vegetative cell with oscillating nucleus","termid":"FYPO:0005002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001985","FYPO:0002403","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"elongated vegetative cell with elongated oscillating nucleus","synonyms":[{"name":"elongated cell with elongated oscillating nucleus during vegetative growth","type":"exact"},{"name":"elongated vegetative cell with elongated oscillating nucleus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004950"}


id: GO:0070821
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a tertiary granule.","definition_xrefs":["GOC:rl","PMID:12070036","GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule membrane","termid":"GO:0030667"},{"relation_name":"part_of","term_name":"tertiary granule","termid":"GO:0070820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"tertiary granule membrane","termid":"GO:0070821"}


id: SO:0000328
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence used experimentally to detect the presence or absence of a complementary nucleic acid.","direct_ancestors":[{"relation_name":"is_a","term_name":"probe","termid":"SO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microarray_oligo","synonyms":[{"name":"microarray oligo","type":"exact"},{"name":"microarray oligonucleotide","type":"exact"}],"termid":"SO:0000328"}


id: PBO:0074754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 113","termid":"PBO:0074754"}


id: GO:0070162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of adiponectin, a protein hormone, by adipose tissue.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"is_a","term_name":"endocrine hormone secretion","termid":"GO:0060986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0023052"],"is_obsolete":false,"name":"adiponectin secretion","termid":"GO:0070162"}


id: PBO:0039373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amnion associated transmembrane protein","termid":"PBO:0039373"}


id: FYPO:0009064
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a combination of X-rays and ramapycin.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"},{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to X-rays and rapamycin during vegetative growth.","synonyms":[{"name":"decreased vegetative cell population growth when treated with rapamycin and X-rays","type":"exact"}],"termid":"FYPO:0009064"}


id: PBO:0089358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pheromone p-factor receptor Mam2","termid":"PBO:0089358"}


id: PBO:0063704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidoglycan recognition protein 3","termid":"PBO:0063704"}


id: PBO:0072319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 5","termid":"PBO:0072319"}


id: GO:0010341
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + a gibberellin = S-adenosyl-L-homocysteine + a gibberellin methyl ester.","definition_xrefs":["PMID:17220201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxyl-O-methyltransferase activity","termid":"GO:0010340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"gibberellin carboxyl-O-methyltransferase activity","termid":"GO:0010341"}


id: GO:0002870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process contributing to anergy in T cells, a state of functional inactivation which is part of T cell tolerance induction.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte anergy","termid":"GO:0002249"},{"relation_name":"is_a","term_name":"T cell tolerance induction","termid":"GO:0002517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell anergy","synonyms":[{"name":"T lymphocyte anergy","type":"exact"},{"name":"T-cell anergy","type":"exact"},{"name":"T-lymphocyte anergy","type":"exact"}],"termid":"GO:0002870"}


id: PBO:0071823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 18","termid":"PBO:0071823"}


id: PBO:0089506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ mediated genome instability protein Rmi1","termid":"PBO:0089506"}


id: PBO:0029199
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_serine_phosphorylation_during_vegetative_growth","termid":"PBO:0029199"}


id: PR:O74926
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rbd2 gene.","definition_xrefs":["UniProtKB:O74926","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC790.03","synonyms":[{"name":"Spom972h-rbd2","type":"exact"}],"termid":"PR:O74926"}


id: PBO:0041746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAMTA1 antisense RNA 3","termid":"PBO:0041746"}


id: PATO:0001204
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001204 not enlarged (obsolete PATO:0001204)","termid":"PATO:0001204"}


id: PBO:0061352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 10","termid":"PBO:0061352"}


id: PBO:0000545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bZIP (basic leucine zipper) transcription factor family","termid":"PBO:0000545"}


id: PBO:0060954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor kappa B subunit 2","termid":"PBO:0060954"}


id: GO:0046593
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: mandelonitrile = cyanide + benzaldehyde.","definition_xrefs":["EC:4.1.2.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"mandelonitrile lyase activity","secondary_identifiers":["MetaCyc:MANDELONITRILE-LYASE-RXN","RHEA:18313"],"synonyms":[{"name":"(R)-oxynitrilase activity","type":"related"},{"name":"D-alpha-hydroxynitrile lyase activity","type":"related"},{"name":"D-oxynitrilase activity","type":"related"},{"name":"hydroxynitrile lyase activity","type":"broad"},{"name":"mandelonitrile benzaldehyde-lyase (cyanide-forming)","type":"related"},{"name":"mandelonitrile benzaldehyde-lyase activity","type":"related"}],"termid":"GO:0046593"}


id: PBO:0064560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein O-mannosyltransferase 1","termid":"PBO:0064560"}


id: GO:0140092
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A brain-specific SWI/SNF-type complex that contains eight or nine proteins, including both conserved (core) and nonconserved components; contains the ATPase product of either the SMARCA4/BAF190A/BRG1 gene, the mammalian ortholog of the yeast SNF2 gene, or the SMARCA2/BAF190B/BRM gene, the mammalian ortholog of the Drosophila brm (brahma) gene, or an ortholog of either of these genes. Compared to the neuron-specific nBAF complex (GO:0071565) it does not contain DPF1, DPF3 or SMARCC1 or their orthologs. May contain PB1/BAF180.","definition_xrefs":["GOC:bhm","PMID:12368262","PMID:17640523","PMID:12620226","PMID:15525990","PMID:17920018","PMID:8804307","PMID:8895581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SWI/SNF superfamily-type complex","termid":"GO:0070603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"bBAF complex","synonyms":[{"name":"brain-specific BAF complex","type":"exact"},{"name":"brain-specific SWI/SNF complex","type":"exact"}],"termid":"GO:0140092"}


id: PR:Q10186
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3F10.12c gene.","definition_xrefs":["UniProtKB:Q10186","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized bHLH domain-containing protein C3F10.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3F10.12c","synonyms":[{"name":"Spom972h-SPAC3F10.12c","type":"exact"}],"termid":"PR:Q10186"}


id: FYPO:0005860
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the cell contains a detectable Mei2 nuclear dot complex during the vegetative growth phase of the life cycle. Normally the Mei2 nuclear dot is only present during the meiotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:26942678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"Mei2 nuclear dot present in cell during vegetative growth","synonyms":[{"name":"Mei2 nuclear dot present in cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005860"}


id: PBO:0063673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 3 pseudogene 2","termid":"PBO:0063673"}


id: PBO:0068380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 181","termid":"PBO:0068380"}


id: PBO:0064516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II, I and III subunit L","termid":"PBO:0064516"}


id: GO:1901409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of phosphorylation of RNA polymerase II C-terminal domain.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphorylation of RNA polymerase II C-terminal domain (obsolete GO:1901409)","synonyms":[{"name":"activation of CTD domain phosphorylation of RNA polymerase II","type":"exact"},{"name":"activation of generation of II(0) form of RNA polymerase II","type":"exact"},{"name":"activation of generation of hyperphosphorylated CTD of RNA polymerase II","type":"exact"},{"name":"activation of hyperphosphorylation of RNA polymerase II C-terminal domain","type":"exact"},{"name":"activation of phosphorylation of RNA polymerase II C-terminal domain","type":"narrow"},{"name":"positive regulation of CTD domain phosphorylation of RNA polymerase II","type":"exact"},{"name":"positive regulation of generation of II(0) form of RNA polymerase II","type":"exact"},{"name":"positive regulation of generation of hyperphosphorylated CTD of RNA polymerase II","type":"exact"},{"name":"positive regulation of hyperphosphorylation of RNA polymerase II C-terminal domain","type":"exact"},{"name":"up regulation of CTD domain phosphorylation of RNA polymerase II","type":"exact"},{"name":"up regulation of generation of II(0) form of RNA polymerase II","type":"exact"},{"name":"up regulation of generation of hyperphosphorylated CTD of RNA polymerase II","type":"exact"},{"name":"up regulation of hyperphosphorylation of RNA polymerase II C-terminal domain","type":"exact"},{"name":"up regulation of phosphorylation of RNA polymerase II C-terminal domain","type":"exact"},{"name":"up-regulation of CTD domain phosphorylation of RNA polymerase II","type":"exact"},{"name":"up-regulation of generation of II(0) form of RNA polymerase II","type":"exact"},{"name":"up-regulation of generation of hyperphosphorylated CTD of RNA polymerase II","type":"exact"},{"name":"up-regulation of hyperphosphorylation of RNA polymerase II C-terminal domain","type":"exact"},{"name":"up-regulation of phosphorylation of RNA polymerase II C-terminal domain","type":"exact"},{"name":"upregulation of CTD domain phosphorylation of RNA polymerase II","type":"exact"},{"name":"upregulation of generation of II(0) form of RNA polymerase II","type":"exact"},{"name":"upregulation of generation of hyperphosphorylated CTD of RNA polymerase II","type":"exact"},{"name":"upregulation of hyperphosphorylation of RNA polymerase II C-terminal domain","type":"exact"},{"name":"upregulation of phosphorylation of RNA polymerase II C-terminal domain","type":"exact"}],"termid":"GO:1901409"}


id: GO:0046159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ocellus pigments, any general or particular coloring matter in living organisms, found or utilized in the ocellus, a minute simple eye found in many invertebrates.","definition_xrefs":["PMID:15176085","GOC:ai","PMID:18421706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment catabolic process","termid":"GO:0046149"},{"relation_name":"is_a","term_name":"ocellus pigment metabolic process","termid":"GO:0046158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"ocellus pigment catabolic process","synonyms":[{"name":"ocellus pigment breakdown","type":"exact"},{"name":"ocellus pigment catabolism","type":"exact"},{"name":"ocellus pigment degradation","type":"exact"}],"termid":"GO:0046159"}


id: PBO:0081893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 844","termid":"PBO:0081893"}


id: PATO:0000663
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000663 occurrent (obsolete PATO:0000663)","termid":"PATO:0000663"}


id: PBO:0028714
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_premeiotic_DNA_replication","termid":"PBO:0028714"}


id: SO:0000918
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An edit to delete a uridine.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000918 delete_U (obsolete SO:0000918)","synonyms":[{"name":"delete U","type":"exact"}],"termid":"SO:0000918"}


id: PBO:0081528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 438","termid":"PBO:0081528"}


id: GO:1990216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont initiates, promotes, or enhances transcription of genes into mRNA in its host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:21994350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host transcription","termid":"GO:0052026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated activation of host transcription","synonyms":[{"name":"positive regulation by symbiont of host transcription","type":"exact"}],"termid":"GO:1990216"}


id: GO:0070579
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-methylcytosine (5mC) in DNA + 2-oxoglutarate + O2 = 5-hydroxymethylcytosine (5hmC) in DNA + succinate + CO2. This reaction is the first step in the removal of cytosine methylated on position 5 in double-stranded DNA. This activity can iteratively oxidize 5hmC to 5-formylcytosine (5fC) and to 5-carboxylcytosine (5caC).","definition_xrefs":["PMID:21778364","PMID:21496894","PMID:19372391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"5-methylcytosine dioxygenase activity","secondary_identifiers":["Reactome:R-HSA-5220952","Reactome:R-HSA-5220990","WIkipedia:DNA_demethylation","Reactome:R-HSA-9817458","EC:1.14.11.80","Reactome:R-HSA-5221014"],"synonyms":[{"name":"methylcytosine dioxygenase activity","type":"broad"}],"termid":"GO:0070579"}


id: PBO:0039565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 61","termid":"PBO:0039565"}


id: GO:1904971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of viral translation.","definition_xrefs":["GOC:bhm","GOC:TermGenie","GO_REF:0000058","PMID:19666601"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral process","termid":"GO:0050792"},{"relation_name":"regulates","term_name":"viral translation","termid":"GO:0019081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of viral translation","synonyms":[{"name":"regulation of viral protein anabolism","type":"exact"},{"name":"regulation of viral protein biosynthesis","type":"exact"},{"name":"regulation of viral protein biosynthetic process","type":"exact"},{"name":"regulation of viral protein formation","type":"exact"},{"name":"regulation of viral protein synthesis","type":"exact"}],"termid":"GO:1904971"}


id: GO:0047759
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: butanal + CoA + NAD(P)+ = butanoyl-CoA + NAD(P)H + H+.","definition_xrefs":["MetaCyc:BUTANAL-DEHYDROGENASE-RXN","EC:1.2.1.57"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"butanal dehydrogenase activity","synonyms":[{"name":"butanal:NAD(P)+ oxidoreductase (CoA-acylating)","type":"related"}],"termid":"GO:0047759"}


id: PBO:0003990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO E1-like activator enzyme Fub2 (predicted)","termid":"PBO:0003990"}


id: PBO:0109838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NuA4 histone acetyltransferase core complex-Piccolo HAT module linker protein Epl1","termid":"PBO:0109838"}


id: FYPO:0004882
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cytokinesis takes place before the mitotic spindle has disassembled. As a result, the contractile ring cuts through the spindle.","definition_xrefs":["PMID:25963819","PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis","termid":"FYPO:0000032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000032","FYPO:0005447","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"cytokinesis in presence of assembled mitotic spindle","synonyms":[{"name":"cytokinesis in presence of assembled mitotic spindle during vegetative growth","type":"exact"},{"name":"cytokinesis in presence of assembled spindle during mitotic cell cycle","type":"exact"},{"name":"mitotic spindle cut by actomyosin contractile ring","type":"exact"}],"termid":"FYPO:0004882"}


id: PBO:0057004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 98","termid":"PBO:0057004"}


id: FYPO:0002369
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 56 of histone H3 in centromere outer repeat regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased H3-K56 acetylation during vegetative growth","termid":"FYPO:0008270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0002494","FYPO:0001320","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H3-K56 acetylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"abnormal histone H3-K56 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K56 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K56 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"abnormal histone H3-K56 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"increased histone H3-K56 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H3K56 acetylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0002369"}


id: PBO:0065883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB33A, member RAS oncogene family","termid":"PBO:0065883"}


id: PBO:0057468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 586","termid":"PBO:0057468"}


id: PBO:0064219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C beta 4","termid":"PBO:0064219"}


id: PBO:0081629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 559","termid":"PBO:0081629"}


id: PBO:0034783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hrd1 ubiquitin ligase complex synviolin family ubiquitin-protein ligase E3 subunit, Hrd1","termid":"PBO:0034783"}


id: PBO:0083430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YER076C","termid":"PBO:0083430"}


id: PBO:0055518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2952","termid":"PBO:0055518"}


id: PBO:0060755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B3 pseudogene 5","termid":"PBO:0060755"}


id: PBO:0004847
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.3.3.1","termid":"PBO:0004847"}


id: GO:0043971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an acetyl group to a lysine residue at position 18 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K18 acetylation (obsolete GO:0043971)","synonyms":[{"name":"histone H3 acetylation at K18","type":"exact"},{"name":"histone H3K18 acetylation","type":"exact"}],"termid":"GO:0043971"}


id: GO:0047355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycerophosphate(n) + CDP-glycerol = glycerophosphate(n+1) + CMP.","definition_xrefs":["EC:2.7.8.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016780","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"CDP-glycerol glycerophosphotransferase activity","secondary_identifiers":["MetaCyc:TEICHOICSYN4-RXN","RHEA:13565"],"synonyms":[{"name":"CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase activity","type":"related"},{"name":"CDPglycerol glycerophosphotransferase activity","type":"related"},{"name":"CGPTase activity","type":"related"},{"name":"cytidine diphosphoglycerol glycerophosphotransferase activity","type":"related"},{"name":"glycerophosphate synthetase activity","type":"related"},{"name":"poly(glycerol phosphate) polymerase activity","type":"related"},{"name":"teichoic acid glycerol transferase activity","type":"related"},{"name":"teichoic-acid synthase activity","type":"broad"}],"termid":"GO:0047355"}


id: GO:0009571
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The space enclosed by the double membrane of a proplastid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid stroma","termid":"GO:0009532"},{"relation_name":"part_of","term_name":"proplastid","termid":"GO:0009537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"proplastid stroma","termid":"GO:0009571"}


id: PBO:0083031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deletion suppressor of mpt5 mutation; relocalizes from bud neck to cytoplasm upon DNA replication stress","termid":"PBO:0083031"}


id: PBO:0078458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable 10 (non-functional)","termid":"PBO:0078458"}


id: GO:0072090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of mesenchymal stem cells, resulting in the expansion of a stem cell population, that contributes to the shaping of a nephron.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal stem cell proliferation","termid":"GO:0097168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal stem cell proliferation involved in nephron morphogenesis","termid":"GO:0072090"}


id: PBO:0052256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KDEL endoplasmic reticulum protein retention receptor 3","termid":"PBO:0052256"}


id: PBO:0051148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-30","termid":"PBO:0051148"}


id: PBO:0054563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1965","termid":"PBO:0054563"}


id: FYPO:0003450
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nucleus is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus","termid":"FYPO:0002956"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to nucleus","synonyms":[{"name":"abolished protein localisation to nucleus","type":"exact"},{"name":"nuclear exclusion","type":"related"},{"name":"nuclear protein exclusion","type":"related"},{"name":"protein localization to nucleus abolished","type":"exact"}],"termid":"FYPO:0003450"}


id: PBO:0091634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sub-telomeric 5Tm protein family Ftm3","termid":"PBO:0091634"}


id: GO:0170003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of heme B from one side of a membrane to the other.","definition_xrefs":["PMID:32121449","PMID:15369674","PMID:9657107","PMID:20610401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme transmembrane transporter activity","termid":"GO:0015232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"heme B transmembrane transporter activity","secondary_identifiers":["RHEA:75443"],"termid":"GO:0170003"}


id: PBO:0085137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein required for maturation of 18S rRNA; member of the eIF4A subfamily of DEAD-box ATP-dependent RNA helicases; 18S rRNA biogenesis defect of the null mutant is functionally complemented by human EIF4A3","termid":"PBO:0085137"}


id: GO:0060390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of SMAD protein signal transduction.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"SMAD protein signal transduction","termid":"GO:0060395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of SMAD protein signal transduction","secondary_identifiers":["GO:0007184"],"synonyms":[{"name":"SMAD protein import into nucleus","type":"narrow"},{"name":"regulation of SMAD protein nuclear translocation","type":"narrow"}],"termid":"GO:0060390"}


id: GO:0033834
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-galactose + kaempferol = UDP + kaempferol 3-O-beta-D-galactoside.","definition_xrefs":["EC:2.4.1.234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosyltransferase activity","termid":"GO:0008378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"kaempferol 3-O-galactosyltransferase activity","secondary_identifiers":["RHEA:15709","MetaCyc:2.4.1.234-RXN"],"synonyms":[{"name":"F3GalTase activity","type":"related"},{"name":"UDP-galactose:kaempferol 3-O-beta-D-galactosyltransferase activity","type":"related"}],"termid":"GO:0033834"}


id: GO:1903828
data:
  {"annotated_genes":["SJAG_05978","SJAG_01373","SJAG_03970","SJAG_01084","SJAG_01825","SJAG_01716","SJAG_01311","SJAG_02392","SJAG_04597","SJAG_03591","SJAG_00883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[87789,111405,102303,102400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905412"},{"annotations":[101856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"},{"annotations":[87016,91913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903067"},{"annotations":[90467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"},{"annotations":[103285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902543"},{"annotations":[110532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900181"},{"annotations":[91914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903077"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a protein localization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"negatively_regulates","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01084":null,"SJAG_01311":null,"SJAG_01373":null,"SJAG_01716":null,"SJAG_01825":null,"SJAG_02392":null,"SJAG_03591":null,"SJAG_03970":null,"SJAG_04597":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of cellular protein localisation","type":"exact"},{"name":"down regulation of cellular protein localization","type":"exact"},{"name":"down-regulation of cellular protein localisation","type":"exact"},{"name":"down-regulation of cellular protein localization","type":"exact"},{"name":"downregulation of cellular protein localisation","type":"exact"},{"name":"downregulation of cellular protein localization","type":"exact"},{"name":"inhibition of cellular protein localisation","type":"narrow"},{"name":"inhibition of cellular protein localization","type":"narrow"},{"name":"negative regulation of cellular protein localisation","type":"exact"},{"name":"negative regulation of cellular protein localization","type":"exact"}],"termid":"GO:1903828","terms_by_termid":{"GO:0042308":null,"GO:0042997":null,"GO:0140325":null,"GO:1900181":null,"GO:1902543":null,"GO:1903067":null,"GO:1903077":null,"GO:1905412":null}}


id: PBO:0081695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 618","termid":"PBO:0081695"}


id: GO:0071666
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-carbohydrate complex that consists of a transmembrane roundabout (Robo) receptor, an extracellular Slit ligand and heparin/heparan sulfate.","definition_xrefs":["PMID:17062560","GOC:sart","PMID:18359766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-carbohydrate complex","termid":"GO:0032992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Slit-Robo signaling complex","synonyms":[{"name":"Slit-Robo signalling complex","type":"exact"}],"termid":"GO:0071666"}


id: PBO:0069311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 567, pseudogene","termid":"PBO:0069311"}


id: GO:0034774
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of a secretory granule.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"secretory granule lumen","termid":"GO:0034774"}


id: PBO:0080347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 111 pseudogene","termid":"PBO:0080347"}


id: PBO:0027474
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_silencing_at_telomere","termid":"PBO:0027474"}


id: GO:0004970
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transmembrane transfer of an ion by a channel that opens when glutamate has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate receptor activity","termid":"GO:0008066"},{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"},{"relation_name":"is_a","term_name":"transmitter-gated monoatomic ion channel activity","termid":"GO:0022824"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0038023","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"glutamate-gated receptor activity","synonyms":[{"name":"ionotropic glutamate receptor activity","type":"exact"}],"termid":"GO:0004970"}


id: PBO:0069334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 593, pseudogene","termid":"PBO:0069334"}


id: PBO:0031630
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_spore_germination_frequency","termid":"PBO:0031630"}


id: GO:0006649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transfer of a phospholipid from its site of synthesis to the plasma membrane.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transport","termid":"GO:0015914"},{"relation_name":"part_of","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"phospholipid transfer to membrane","termid":"GO:0006649"}


id: PR:Q9UUH8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC630.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUH8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C630.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC630.04c","synonyms":[{"name":"Spom972h-SPAC630.04c","type":"exact"}],"termid":"PR:Q9UUH8"}


id: PBO:0003251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein Vac8 (predicted)","termid":"PBO:0003251"}


id: SO:1000171
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal deletion whereby three breaks occur in the same chromosome; one central region is lost, and the other is inverted.","definition_xrefs":["SO:ke","FB:reference_manual"],"direct_ancestors":[{"relation_name":"has_part","term_name":"deletion","termid":"SO:0000159"},{"relation_name":"has_part","term_name":"inversion","termid":"SO:1000036"},{"relation_name":"is_a","term_name":"chromosomal_deletion","termid":"SO:1000029"},{"relation_name":"is_a","term_name":"chromosomal_inversion","termid":"SO:1000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deficient_inversion","synonyms":[{"name":"(Drosophila)Df","type":"related"},{"name":"(Drosophila)DfIn","type":"related"},{"name":"deficient inversion","type":"exact"}],"termid":"SO:1000171"}


id: PR:O74409
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A uricase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uricase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1223.09","secondary_identifiers":["UniProtKB:O74409"],"synonyms":[{"name":"Spom972h-Uox","type":"exact"},{"name":"urate oxidase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74409"}


id: GO:0043770
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2-demethylmenaquinol + S-adenosyl-L-methionine = a menaquinol + H+ + S-adenosyl-L-homocysteine. Reaction substrates can have varying polyprenyl side chain length.","definition_xrefs":["RHEA:42640","PMID:1444716","PMID:9045837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"demethylmenaquinone methyltransferase activity","secondary_identifiers":["EC:2.1.1.163","MetaCyc:RXN-11046"],"termid":"GO:0043770"}


id: GO:0017084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamate + ATP + NADPH = ADP + L-glutamate gamma-semialdehyde + NADP+ + phosphate.","definition_xrefs":["MetaCyc:PROLINE-MULTI"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"delta1-pyrroline-5-carboxylate synthetase activity","secondary_identifiers":["RHEA:33207","Reactome:R-HSA-508040"],"synonyms":[{"name":"D1-pyrroline-5-carboxylate synthetase activity","type":"exact"}],"termid":"GO:0017084"}


id: PBO:0005351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridylate kinase (predicted)","termid":"PBO:0005351"}


id: PR:Q9URX6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal protein L31 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02089","PANTHER:PTHR10956:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC890.08","secondary_identifiers":["UniProtKB:Q9URX6"],"synonyms":[{"name":"Spom972h-RPL31","type":"exact"}],"termid":"PR:Q9URX6"}


id: GO:0097163
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Covalently binding to sulfur and delivering it to an acceptor molecule.","definition_xrefs":["PMID:16387657","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular carrier activity","termid":"GO:0140104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140104"],"is_obsolete":false,"name":"sulfur carrier activity","termid":"GO:0097163"}


id: GO:2000678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of transcription regulatory region DNA binding.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA binding","termid":"GO:0043392"},{"relation_name":"is_a","term_name":"regulation of transcription regulatory region DNA binding","termid":"GO:2000677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of transcription regulatory region DNA binding","termid":"GO:2000678"}


id: PBO:0038464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABCA3 pseudogene 1","termid":"PBO:0038464"}


id: PBO:0031254
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_spindle_assembly","termid":"PBO:0031254"}


id: FYPO:0001273
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic spindle elongation begins, but mitotic sister chromatid segregation stops before completing separation of chromosomes, and DNA remains in a single mass at or near the midpoint of the mitotic spindle.","definition_xrefs":["PomBase:vw","PomBase:mah","PMID:22711988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete, unequal mitotic sister chromatid segregation","termid":"FYPO:0001271"},{"relation_name":"is_a","term_name":"mitotic spindle elongation without chromosome separation","termid":"FYPO:0003758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0000337","FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"mitotic spindle elongation with incomplete, unequal mitotic sister chromatid segregation and unseparated DNA","synonyms":[{"name":"mitotic spindle elongation with incomplete, unequal mitotic sister chromatid segregation and unseparated DNA during vegetative growth","type":"exact"},{"name":"mitotic spindle elongation with incomplete, unequal mitotic sister chromatid separation, with unseparated DNA","type":"related"},{"name":"spindle elongation with incomplete, unequal mitotic sister chromatid segregation and unseparated DNA during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001273"}


id: PBO:0017540
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Copper regulated Meiotic gene","termid":"PBO:0017540"}


id: GO:1905194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chloroplast fission.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:26862170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of chloroplast fission","termid":"GO:1905192"},{"relation_name":"positively_regulates","term_name":"chloroplast fission","termid":"GO:0010020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chloroplast fission","synonyms":[{"name":"activation of chloroplast division","type":"narrow"},{"name":"activation of chloroplast fission","type":"narrow"},{"name":"positive regulation of chloroplast division","type":"exact"},{"name":"up regulation of chloroplast division","type":"exact"},{"name":"up regulation of chloroplast fission","type":"exact"},{"name":"up-regulation of chloroplast division","type":"exact"},{"name":"up-regulation of chloroplast fission","type":"exact"},{"name":"upregulation of chloroplast division","type":"exact"},{"name":"upregulation of chloroplast fission","type":"exact"}],"termid":"GO:1905194"}


id: FYPO:0000677
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype in which protein localization to the prospore membrane is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization to prospore membrane","synonyms":[{"name":"abnormal protein localisation to prospore membrane","type":"exact"},{"name":"abnormal protein localization to forespore membrane","type":"exact"}],"termid":"FYPO:0000677"}


id: PBO:0057397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548f-5","termid":"PBO:0057397"}


id: PBO:0043815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copine 6","termid":"PBO:0043815"}


id: SO:0000657
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence containing one or more repeat units.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"repeat_unit","termid":"SO:0000726"},{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repeat_region","synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:other","type":"exact"},{"name":"repeat region","type":"exact"}],"termid":"SO:0000657"}


id: PBO:0069738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1019, pseudogene","termid":"PBO:0069738"}


id: PBO:0090968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome export GTP binding protein Nog1","termid":"PBO:0090968"}


id: PBO:0017034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase, RIO family Rio2 (predicted)","termid":"PBO:0017034"}


id: PBO:0070728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 33","termid":"PBO:0070728"}


id: PBO:0073279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14","termid":"PBO:0073279"}


id: PBO:0061586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"netrin G1","termid":"PBO:0061586"}


id: PBO:0077866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin 3 pseudogene 7","termid":"PBO:0077866"}


id: PBO:0076981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine aldolase 1, pseudogene","termid":"PBO:0076981"}


id: PBO:0039723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein B mRNA editing enzyme catalytic subunit 3D","termid":"PBO:0039723"}


id: GO:0043584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the nose over time, from its formation to the mature structure. The nose is the specialized structure of the face that serves as the organ of the sense of smell and as part of the respiratory system. Includes the nasi externus (external nose) and cavitas nasi (nasal cavity).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"},{"relation_name":"part_of","term_name":"respiratory system development","termid":"GO:0060541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nose development","synonyms":[{"name":"nasus development","type":"exact"}],"termid":"GO:0043584"}


id: PBO:0030849
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_translation","termid":"PBO:0030849"}


id: PBO:0005857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Nsa2 (predicted)","termid":"PBO:0005857"}


id: PBO:0036048
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-curved_mitotic_spindle_during_anaphase_B","termid":"PBO:0036048"}


id: PBO:0034353
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_postdisplacement_relationship_with","termid":"PBO:0034353"}


id: PBO:0002416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor Spt6 (predicted)","termid":"PBO:0002416"}


id: GO:0097316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an N-acetyl-D-glucosamine stimulus.","definition_xrefs":["PMID:21700702","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to N-acetyl-D-glucosamine","termid":"GO:0097315"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to N-acetyl-D-glucosamine","termid":"GO:0097316"}


id: PBO:0041577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 21 open reading frame 91","termid":"PBO:0041577"}


id: PBO:0084278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein, member of the p24 family; forms complex with Erp3p, Erp5p, and Emp24p; non-essential gene identified in a screen for mutants with increased levels of rDNA transcription","termid":"PBO:0084278"}


id: PBO:0063682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 4 pseudogene 6","termid":"PBO:0063682"}


id: PBO:0055967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and death domain containing 1","termid":"PBO:0055967"}


id: PATO:0001809
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pattern quality inhering in a bearer by virtue of the bearer's being compact or dense in arrangement.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regular spatial pattern","termid":"PATO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tight","termid":"PATO:0001809"}


id: GO:0090576
data:
  {"annotated_genes":["SJAG_03546","SJAG_03354","SJAG_03007","SJAG_00421","SJAG_03120","SJAG_01827","SJAG_00585","SJAG_05339","SJAG_02815"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[112277,91639,99131],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000126"},{"annotations":[95637,84257,105184,111432,102974,108706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000127"}]},"cv_name":"cellular_component","definition":"A transcription factor complex that acts at a regulatory region of a gene transcribed by RNA polymerase III.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator complex","termid":"GO:0005667"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00421":null,"SJAG_00585":null,"SJAG_01827":null,"SJAG_02815":null,"SJAG_03007":null,"SJAG_03120":null,"SJAG_03354":null,"SJAG_03546":null,"SJAG_05339":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"RNA polymerase III transcription regulator complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA polymerase III transcription factor complex","type":"narrow"}],"termid":"GO:0090576","terms_by_termid":{"GO:0000126":null,"GO:0000127":null}}


id: PBO:0068599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 50, pseudogene","termid":"PBO:0068599"}


id: GO:0040029
data:
  {"annotated_genes":["SJAG_00746","SJAG_01325","SJAG_01938","SJAG_03047","SJAG_04755","SJAG_02447","SJAG_00896","SJAG_03033","SJAG_01111","SJAG_00414","SJAG_03042","SJAG_02385","SJAG_02927","SJAG_02576","SJAG_01611","SJAG_03635","SJAG_04596","SJAG_02589","SJAG_00349","SJAG_03394","SJAG_02549","SJAG_04613","SJAG_02592","SJAG_00873","SJAG_01046","SJAG_03128","SJAG_00441","SJAG_02500","SJAG_00160","SJAG_04061","SJAG_01653","SJAG_03982","SJAG_02303","SJAG_03916","SJAG_00676","SJAG_01075","SJAG_02311","SJAG_02466","SJAG_01599","SJAG_00266","SJAG_03576","SJAG_01823","SJAG_02723","SJAG_05313","SJAG_00641","SJAG_07011","SJAG_03255","SJAG_04574","SJAG_02458","SJAG_03776","SJAG_04253","SJAG_02622","SJAG_03366","SJAG_00961","SJAG_02382","SJAG_04274","SJAG_02621","SJAG_02773","SJAG_02798","SJAG_02872","SJAG_01926","SJAG_01601","SJAG_03664","SJAG_00184","SJAG_02409","SJAG_03668","SJAG_04389","SJAG_00440","SJAG_03680","SJAG_01016","SJAG_00584","SJAG_03006","SJAG_00293","SJAG_04097","SJAG_00769","SJAG_01873","SJAG_03624","SJAG_02416","SJAG_03118","SJAG_04989","SJAG_00739","SJAG_03579","SJAG_01540","SJAG_04213","SJAG_00868","SJAG_01836","SJAG_03543","SJAG_02869","SJAG_04039","SJAG_05192","SJAG_01675","SJAG_03942","SJAG_01230","SJAG_04369","SJAG_02541","SJAG_03689","SJAG_04194","SJAG_02981","SJAG_01622","SJAG_03193","SJAG_00320","SJAG_00045","SJAG_00581","SJAG_01331","SJAG_03844","SJAG_00087","SJAG_01511","SJAG_01610","SJAG_03441","SJAG_00743","SJAG_02768","SJAG_02329","SJAG_02170","SJAG_02342","SJAG_02119","SJAG_00756","SJAG_04141","SJAG_02701","SJAG_00058","SJAG_03356","SJAG_05020","SJAG_04758","SJAG_00883","SJAG_03997","SJAG_01110","SJAG_01465","SJAG_01658","SJAG_01804","SJAG_02778","SJAG_03944","SJAG_03694","SJAG_01475","SJAG_02906","SJAG_04005","SJAG_02066","SJAG_00341","SJAG_01513","SJAG_02165","SJAG_02401","SJAG_00735","SJAG_02571","SJAG_03787","SJAG_01878","SJAG_02817","SJAG_03145","SJAG_03884","SJAG_04038","SJAG_00335","SJAG_02319","SJAG_02698","SJAG_00302","SJAG_03752","SJAG_02314","SJAG_02908","SJAG_02990","SJAG_03627","SJAG_00142","SJAG_02381","SJAG_04030","SJAG_01711","SJAG_03431","SJAG_04942","SJAG_01745","SJAG_02594","SJAG_04396","SJAG_04205","SJAG_00701","SJAG_02725","SJAG_04879","SJAG_03599","SJAG_04576","SJAG_03758","SJAG_00934","SJAG_03945","SJAG_01579","SJAG_01008","SJAG_04186","SJAG_02254","SJAG_03839","SJAG_04768","SJAG_01867","SJAG_02846"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87289,89441,93285,100250,105514,108166,112283,114904],"is_not":false,"summary":null,"term":"GO:0040029"},{"annotations":[109667,107327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140719"},{"annotations":[90137,99285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140718"},{"annotations":[86815,95210,108673,99119,95184,111321,113195,108672,84226,90138,98067,99286,94962,108671,98068,109121,92221,98066,113820],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0033696"},{"annotations":[115666,111475,115667,110182,110053,87322,105997,98071,100252,100154,105515,90408,87838,98069,98470,100251,86816,88650,108269,108675,111071,108676,108674,98070,113775,90666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031507"},{"annotations":[93398,89249,89286,99180,93286,110209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045814"},{"annotations":[102697],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0061188"},{"annotations":[104543],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0060906"},{"annotations":[108682,88878,86116,92794,94320,98075,95190,98076,98077,100155,106540,108270,110484,88120,87323,98844,108167,107330,108680,108681,110056,109359,86275,90140,89497,104215,99288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031508"},{"annotations":[87398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140462"},{"annotations":[95022],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0031453"},{"annotations":[87236],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090053"},{"annotations":[87237,90431,106397],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090055"},{"annotations":[103288,109360,104216,100156,110485,88121,108168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000183"},{"annotations":[86870,94630],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0031445"},{"annotations":[93255,96363],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090052"},{"annotations":[113821],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010964"},{"annotations":[93256,87911,96364,113822,114178],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902801"},{"annotations":[109733,100157,109123,103836,114154,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process that modulates the frequency, rate or extent of gene expression through chromatin remodeling either by modifying higher order chromatin fiber structure, nucleosomal histones, or cytosine methylation of DNA. Once established, this regulation may be maintained over many cell divisions. It can also be heritable in the absence of the instigating signal.","definition_xrefs":["PMID:11498582","PMID:22243696","PMID:34414474","PMID:10521337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin remodeling","termid":"GO:0006338"},{"relation_name":"is_a","term_name":"regulation of gene expression","termid":"GO:0010468"}],"gene_count":182,"genes_by_uniquename":{"SJAG_00045":null,"SJAG_00058":null,"SJAG_00087":null,"SJAG_00142":null,"SJAG_00160":null,"SJAG_00184":null,"SJAG_00266":null,"SJAG_00293":null,"SJAG_00302":null,"SJAG_00320":null,"SJAG_00335":null,"SJAG_00341":null,"SJAG_00349":null,"SJAG_00414":null,"SJAG_00440":null,"SJAG_00441":null,"SJAG_00581":null,"SJAG_00584":null,"SJAG_00641":null,"SJAG_00676":null,"SJAG_00701":null,"SJAG_00735":null,"SJAG_00739":null,"SJAG_00743":null,"SJAG_00746":null,"SJAG_00756":null,"SJAG_00769":null,"SJAG_00868":null,"SJAG_00873":null,"SJAG_00883":null,"SJAG_00896":null,"SJAG_00934":null,"SJAG_00961":null,"SJAG_01008":null,"SJAG_01016":null,"SJAG_01046":null,"SJAG_01075":null,"SJAG_01110":null,"SJAG_01111":null,"SJAG_01230":null,"SJAG_01325":null,"SJAG_01331":null,"SJAG_01465":null,"SJAG_01475":null,"SJAG_01511":null,"SJAG_01513":null,"SJAG_01540":null,"SJAG_01579":null,"SJAG_01599":null,"SJAG_01601":null,"SJAG_01610":null,"SJAG_01611":null,"SJAG_01622":null,"SJAG_01653":null,"SJAG_01658":null,"SJAG_01675":null,"SJAG_01711":null,"SJAG_01745":null,"SJAG_01804":null,"SJAG_01823":null,"SJAG_01836":null,"SJAG_01867":null,"SJAG_01873":null,"SJAG_01878":null,"SJAG_01926":null,"SJAG_01938":null,"SJAG_02066":null,"SJAG_02119":null,"SJAG_02165":null,"SJAG_02170":null,"SJAG_02254":null,"SJAG_02303":null,"SJAG_02311":null,"SJAG_02314":null,"SJAG_02319":null,"SJAG_02329":null,"SJAG_02342":null,"SJAG_02381":null,"SJAG_02382":null,"SJAG_02385":null,"SJAG_02401":null,"SJAG_02409":null,"SJAG_02416":null,"SJAG_02447":null,"SJAG_02458":null,"SJAG_02466":null,"SJAG_02500":null,"SJAG_02541":null,"SJAG_02549":null,"SJAG_02571":null,"SJAG_02576":null,"SJAG_02589":null,"SJAG_02592":null,"SJAG_02594":null,"SJAG_02621":null,"SJAG_02622":null,"SJAG_02698":null,"SJAG_02701":null,"SJAG_02723":null,"SJAG_02725":null,"SJAG_02768":null,"SJAG_02773":null,"SJAG_02778":null,"SJAG_02798":null,"SJAG_02817":null,"SJAG_02846":null,"SJAG_02869":null,"SJAG_02872":null,"SJAG_02906":null,"SJAG_02908":null,"SJAG_02927":null,"SJAG_02981":null,"SJAG_02990":null,"SJAG_03006":null,"SJAG_03033":null,"SJAG_03042":null,"SJAG_03047":null,"SJAG_03118":null,"SJAG_03128":null,"SJAG_03145":null,"SJAG_03193":null,"SJAG_03255":null,"SJAG_03356":null,"SJAG_03366":null,"SJAG_03394":null,"SJAG_03431":null,"SJAG_03441":null,"SJAG_03543":null,"SJAG_03576":null,"SJAG_03579":null,"SJAG_03599":null,"SJAG_03624":null,"SJAG_03627":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03668":null,"SJAG_03680":null,"SJAG_03689":null,"SJAG_03694":null,"SJAG_03752":null,"SJAG_03758":null,"SJAG_03776":null,"SJAG_03787":null,"SJAG_03839":null,"SJAG_03844":null,"SJAG_03884":null,"SJAG_03916":null,"SJAG_03942":null,"SJAG_03944":null,"SJAG_03945":null,"SJAG_03982":null,"SJAG_03997":null,"SJAG_04005":null,"SJAG_04030":null,"SJAG_04038":null,"SJAG_04039":null,"SJAG_04061":null,"SJAG_04097":null,"SJAG_04141":null,"SJAG_04186":null,"SJAG_04194":null,"SJAG_04205":null,"SJAG_04213":null,"SJAG_04253":null,"SJAG_04274":null,"SJAG_04369":null,"SJAG_04389":null,"SJAG_04396":null,"SJAG_04574":null,"SJAG_04576":null,"SJAG_04596":null,"SJAG_04613":null,"SJAG_04755":null,"SJAG_04758":null,"SJAG_04768":null,"SJAG_04879":null,"SJAG_04942":null,"SJAG_04989":null,"SJAG_05020":null,"SJAG_05192":null,"SJAG_05313":null,"SJAG_07011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006325","GO:0008150"],"is_obsolete":false,"name":"epigenetic regulation of gene expression","references_by_uniquename":{"GO_REF:0000107":null,"PMID:35226668":null},"synonyms":[{"name":"regulation of gene expression, epigenetic","type":"exact"}],"termid":"GO:0040029","terms_by_termid":{"GO:0000183":null,"GO:0010964":null,"GO:0030466":null,"GO:0031048":null,"GO:0031445":null,"GO:0031453":null,"GO:0031507":null,"GO:0031508":null,"GO:0031509":null,"GO:0033696":null,"GO:0040029":null,"GO:0045814":null,"GO:0045815":null,"GO:0060906":null,"GO:0061188":null,"GO:0090052":null,"GO:0090053":null,"GO:0090055":null,"GO:0140462":null,"GO:0140718":null,"GO:0140719":null,"GO:0140727":null,"GO:0141005":null,"GO:0141194":null,"GO:1902794":null,"GO:1902795":null,"GO:1902801":null}}


id: GO:0032810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a sterol response element (SRE), a nonpalindromic sequence found in the promoters of genes involved in lipid metabolism.","definition_xrefs":["GOC:vk","PMID:11994399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding","termid":"GO:0000978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0000976","GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"sterol response element binding","synonyms":[{"name":"SRE binding","type":"exact"}],"termid":"GO:0032810"}


id: GO:0048859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the limits of an anatomical structure are generated. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome.","definition_xrefs":["GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of anatomical boundary","termid":"GO:0048859"}


id: PBO:0109377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 9A","termid":"PBO:0109377"}


id: PBO:0057502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 620","termid":"PBO:0057502"}


id: FYPO:0002451
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell is inviable and cell shape is altered in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal cell shape","termid":"FYPO:0001126"},{"relation_name":"has_part","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"is_a","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000005","FYPO:0001985","FYPO:0000004"],"is_obsolete":false,"name":"inviable vegetative cell with abnormal cell shape","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"inviable vegetative cell with abnormal cell shape during mitotic cell cycle","type":"related"},{"name":"inviable, abnormal cell shape during vegetative growth","type":"exact"},{"name":"lethal; vegetative cell with abnormal cell shape","type":"exact"}],"termid":"FYPO:0002451","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: MOD:01482
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a calcium atom or a cluster containing calcium for hydrogen atoms, or that coordinates a calcium ion.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal or metal cluster containing modified residue","termid":"MOD:00698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium containing modified residue","synonyms":[{"name":"CaRes","type":"exact"}],"termid":"MOD:01482"}


id: PBO:0046215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 8","termid":"PBO:0046215"}


id: PBO:0060057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 4","termid":"PBO:0060057"}


id: GO:0021829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of oligodendrocytes from the subpallium to the cerebral cortex during forebrain development.","definition_xrefs":["GO_REF:0000021","GOC:jid","GOC:dgh","GOC:cls","PMID:12626695","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substrate-independent telencephalic tangential migration","termid":"GO:0021826"},{"relation_name":"is_a","term_name":"telencephalon glial cell migration","termid":"GO:0022030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oligodendrocyte cell migration from the subpallium to the cortex","termid":"GO:0021829"}


id: GO:0031545
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl L-proline + 2-oxoglutarate + O2 = peptidyl trans-4-hydroxy-L-proline + succinate + CO2.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-proline dioxygenase activity","termid":"GO:0031543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491","GO:0140096"],"is_obsolete":false,"name":"peptidyl-proline 4-dioxygenase activity","secondary_identifiers":["Reactome:R-HSA-1234179","RHEA:63484","Reactome:R-HSA-1234166","Reactome:R-HSA-1234173","Reactome:R-HSA-1234177","Reactome:R-HSA-1234181","Reactome:R-HSA-1234165"],"synonyms":[{"name":"HIF-type prolyl 4-hydroxylase","type":"narrow"},{"name":"prolyl 4-hydroxylase","type":"broad"}],"termid":"GO:0031545"}


id: PBO:0044636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA cross-link repair 1C pseudogene 1","termid":"PBO:0044636"}


id: PBO:0090689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin alpha family nuclear import signal receptor adaptor Cut15","termid":"PBO:0090689"}


id: PBO:0016518
data:
  {"annotation_feature_type":"gene","cv_name":"pathway","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mkh1-Pek1-Pmk1 MAP kinase","termid":"PBO:0016518"}


id: PBO:0034551
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_subtelomeric_chromatin_knob_formation","termid":"PBO:0034551"}


id: PBO:0049948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIF1A antisense RNA 1","termid":"PBO:0049948"}


id: PBO:0066661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIPK2 divergent transcript","termid":"PBO:0066661"}


id: PBO:0044800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 4A","termid":"PBO:0044800"}


id: PBO:0040322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit epsilon pseudogene 1","termid":"PBO:0040322"}


id: PBO:0111869
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PP2A","termid":"PBO:0111869"}


id: PATO:0002438
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being located or placed beneath the skin.","definition_xrefs":["thefreedictionary:thefreedictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subdermal","synonyms":[{"name":"subcutaneous","type":"exact"}],"termid":"PATO:0002438"}


id: PBO:0002646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosyltransferase complex subunit Alg9 (predicted)","termid":"PBO:0002646"}


id: GO:0036312
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a regulatory subunit of phosphatidylinositol 3-kinase. The regulatory subunit associates with the catalytic subunit to regulate both its activity and subcellular location.","definition_xrefs":["GOC:bf","PMID:20505341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol 3-kinase binding","termid":"GO:0043548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"phosphatidylinositol 3-kinase regulatory subunit binding","synonyms":[{"name":"PI3K regulatory subunit binding","type":"exact"},{"name":"p85 binding","type":"related"}],"termid":"GO:0036312"}


id: PBO:0051456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 7-35 (pseudogene)","termid":"PBO:0051456"}


id: PBO:0047416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBXW7 antisense RNA 1","termid":"PBO:0047416"}


id: PBO:0036423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP, GTPase activating protein Rga7","termid":"PBO:0036423"}


id: PBO:0049805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 1","termid":"PBO:0049805"}


id: GO:1990107
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-deoxy-D-xylulose 5-phosphate + 2-iminoacetate + thiocarboxy-adenylate-[sulfur-carrier protein ThiS] = 2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate + [sulfur-carrier protein ThiS] + 2 H2O.","definition_xrefs":["PMID:22031445","EC:2.8.1.10","GOC:cjk","RHEA:26297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase activity","termid":"GO:0016783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016782"],"is_obsolete":false,"name":"thiazole synthase activity","synonyms":[{"name":"1-deoxy-D-xylulose 5-phosphate:thiol sulfurtransferase activity","type":"exact"}],"termid":"GO:1990107"}


id: PBO:0108705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RanGAP Hba1","termid":"PBO:0108705"}


id: GO:0075045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of symbiont haustorium formation for nutrient acquisition from host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"regulation of biological process involved in symbiotic interaction","termid":"GO:0043903"},{"relation_name":"is_a","term_name":"modulation of formation of structure involved in a symbiotic process","termid":"GO:0044145"},{"relation_name":"regulates","term_name":"formation of haustorium for nutrient acquisition","termid":"GO:0052094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of formation by symbiont of haustorium for nutrient acquisition from host","termid":"GO:0075045"}


id: GO:1902162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator.","definition_xrefs":["PMID:17719541","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA damage response, signal transduction by p53 class mediator","termid":"GO:0043516"},{"relation_name":"regulates","term_name":"DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator","termid":"GO:0006978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator","termid":"GO:1902162"}


id: GO:0100006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates sulfite transport.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of sulfite transport by transcription from RNA polymerase II promoter (obsolete GO:0100006)","termid":"GO:0100006"}


id: PBO:0113273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIK-related protein kinase and rapamycin target; subunit of TORC1, a complex that regulates growth in response to nutrients and TORC2, a complex that regulates plasma membrane (PM) homeostasis and cell-cycle dependent polarization of the actin cytoskeleton; involved in meiosis; PM retention is dependent on Avo3p; malonyl-CoA is a direct ATP-competitive inhibitor of TORC1; TOR2 has a paralog, TOR1, that arose from the whole genome duplication","termid":"PBO:0113273"}


id: GO:0051150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of smooth muscle cell differentiation.","definition_xrefs":["CL:0000192","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle cell differentiation","termid":"GO:0051147"},{"relation_name":"regulates","term_name":"smooth muscle cell differentiation","termid":"GO:0051145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of smooth muscle cell differentiation","termid":"GO:0051150"}


id: FYPO:0007366
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 2,3-bisphosphoglyceric acid measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular bisphosphoglyceric acid level","termid":"FYPO:0006970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular 2,3-bisphosphoglyceric acid level","synonyms":[{"name":"decreased cellular 2,3-bisphosphoglycerate level","type":"related"},{"name":"decreased cellular 2,3-bisphosphoglyceric acid level during mitotic cell cycle","type":"related"},{"name":"decreased cellular 2,3-bisphosphoglyceric acid level during vegetative growth","type":"exact"},{"name":"decreased cellular 2-/3-bisphosphoglyceric acid level","type":"exact"},{"name":"decreased level of 2,3-bisphosphoglyceric acid in cell","type":"exact"},{"name":"reduced cellular 2,3-bisphosphoglyceric acid level","type":"exact"}],"termid":"FYPO:0007366"}


id: PBO:0029015
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_centromeric_outer_repeat_transcript-derived_siRNA_level","termid":"PBO:0029015"}


id: FYPO:0004690
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 9 of histone H3 at the silent mating-type cassettes occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0000892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H3-K9 acetylation at silent mating-type cassette during vegetative growth","synonyms":[{"name":"increased histone H3-K9 acetylation at mating-type region heterochromatin during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 acetylation at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 acetylation at silent mating-type cassette during vegetative growth","type":"exact"}],"termid":"FYPO:0004690"}


id: PBO:0078654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 7-1","termid":"PBO:0078654"}


id: FYPO:0004932
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which one or more proteins is localized to the prospore membrane for a longer time than normal.","definition_xrefs":["PMID:20410137","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to prospore membrane","termid":"FYPO:0000677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of protein localization to prospore membrane","synonyms":[{"name":"increased duration of protein localisation to prospore membrane","type":"exact"},{"name":"increased duration of protein localization to forespore membrane","type":"exact"},{"name":"prolonged protein localization to prospore membrane","type":"exact"}],"termid":"FYPO:0004932"}


id: PBO:0005183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin Cut15","termid":"PBO:0005183"}


id: PBO:0003721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase Ubp11","termid":"PBO:0003721"}


id: GO:0048500
data:
  {"annotated_genes":["SJAG_03411","SJAG_01840","SJAG_03684","SJAG_01759","SJAG_01282","SJAG_02456"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[112718,110429,87675,111996,86884,111194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005786"}]},"cv_name":"cellular_component","definition":"A complex of protein and RNA which facilitates translocation of proteins across membranes.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01282":null,"SJAG_01759":null,"SJAG_01840":null,"SJAG_02456":null,"SJAG_03411":null,"SJAG_03684":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"signal recognition particle","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Signal_recognition_particle"],"termid":"GO:0048500","terms_by_termid":{"GO:0005786":null}}


id: PATO:0001973
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being tapering gradually into a rigid point.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tapered","termid":"PATO:0001500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cuspidate","termid":"PATO:0001973"}


id: PBO:0055680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase I","termid":"PBO:0055680"}


id: PBO:0055350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2779","termid":"PBO:0055350"}


id: PBO:0027678
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitochondrial_translation","termid":"PBO:0027678"}


id: GO:1900377
data:
  {"annotated_genes":["SJAG_00792"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905569"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of secondary metabolite biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"negatively_regulates","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"negative regulation of secondary metabolite biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of secondary metabolite biosynthesis","type":"exact"},{"name":"down regulation of secondary metabolite biosynthetic process","type":"exact"},{"name":"down-regulation of secondary metabolite biosynthesis","type":"exact"},{"name":"down-regulation of secondary metabolite biosynthetic process","type":"exact"},{"name":"downregulation of secondary metabolite biosynthesis","type":"exact"},{"name":"downregulation of secondary metabolite biosynthetic process","type":"exact"},{"name":"inhibition of secondary metabolite biosynthesis","type":"exact"},{"name":"inhibition of secondary metabolite biosynthetic process","type":"narrow"},{"name":"negative regulation of secondary metabolite biosynthesis","type":"exact"}],"termid":"GO:1900377","terms_by_termid":{"GO:1905569":null}}


id: PBO:0044364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 53","termid":"PBO:0044364"}


id: GO:0030783
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + [cytochrome c]-methionine = S-adenosyl-L-homocysteine + [cytochrome c]-S-methyl-methionine.","definition_xrefs":["EC:2.1.1.123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"[cytochrome c]-methionine S-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.123-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:cytochrome c-methionine S-methyltransferase activity","type":"related"},{"name":"cytochrome c-methionine S-methyltransferase activity","type":"related"}],"termid":"GO:0030783"}


id: PBO:0036164
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_spindle_elongation_without_chromosome_separation_with_centromeric_DNA_associated_with_spindle","termid":"PBO:0036164"}


id: GO:1902886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of proteasome-activating ATPase activity.","definition_xrefs":["GOC:di","PMID:23995839","GOC:TermGenie","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of proteasome-activating ATPase activity (obsolete GO:1902886)","synonyms":[{"name":"down regulation of ATPase involved in positive regulation of proteasomal protein catabolic process","type":"exact"},{"name":"down regulation of proteasomal ATPase activity","type":"exact"},{"name":"down regulation of proteasome channel gating activity","type":"narrow"},{"name":"down regulation of proteasome channel opening activity","type":"narrow"},{"name":"down regulation of proteasome-activating ATPase activity","type":"exact"},{"name":"down-regulation of ATPase involved in positive regulation of proteasomal protein catabolic process","type":"exact"},{"name":"down-regulation of proteasomal ATPase activity","type":"exact"},{"name":"down-regulation of proteasome channel gating activity","type":"narrow"},{"name":"down-regulation of proteasome channel opening activity","type":"narrow"},{"name":"down-regulation of proteasome-activating ATPase activity","type":"exact"},{"name":"downregulation of ATPase involved in positive regulation of proteasomal protein catabolic process","type":"exact"},{"name":"downregulation of proteasomal ATPase activity","type":"exact"},{"name":"downregulation of proteasome channel gating activity","type":"narrow"},{"name":"downregulation of proteasome channel opening activity","type":"narrow"},{"name":"downregulation of proteasome-activating ATPase activity","type":"exact"},{"name":"inhibition of ATPase involved in positive regulation of proteasomal protein catabolic process","type":"narrow"},{"name":"inhibition of proteasomal ATPase activity","type":"narrow"},{"name":"inhibition of proteasome channel gating activity","type":"narrow"},{"name":"inhibition of proteasome channel opening activity","type":"narrow"},{"name":"inhibition of proteasome-activating ATPase activity","type":"narrow"},{"name":"negative regulation of ATPase involved in positive regulation of proteasomal protein catabolic process","type":"exact"},{"name":"negative regulation of proteasomal ATPase activity","type":"exact"},{"name":"negative regulation of proteasome channel gating activity","type":"narrow"},{"name":"negative regulation of proteasome channel opening activity","type":"narrow"}],"termid":"GO:1902886"}


id: FYPO:0003432
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of a protein to histone H3 methylated on the lysine at position 9 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein-protein interaction","termid":"FYPO:0000703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal histone H3K9me binding","synonyms":[{"name":"normal K9-methylated histone H3 binding","type":"exact"},{"name":"normal methylated histone H3K9me binding","type":"exact"}],"termid":"FYPO:0003432"}


id: PBO:0081345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 148","termid":"PBO:0081345"}


id: GO:1905278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of epithelial tube formation.","definition_xrefs":["GOC:bhm","PMID:25745997","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of epithelial tube formation","termid":"GO:1905276"},{"relation_name":"is_a","term_name":"positive regulation of morphogenesis of an epithelium","termid":"GO:1905332"},{"relation_name":"positively_regulates","term_name":"epithelial tube formation","termid":"GO:0072175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epithelial tube formation","synonyms":[{"name":"activation of epithelial tube formation","type":"narrow"},{"name":"up regulation of epithelial tube formation","type":"exact"},{"name":"up-regulation of epithelial tube formation","type":"exact"},{"name":"upregulation of epithelial tube formation","type":"exact"}],"termid":"GO:1905278"}


id: MOD:00069
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to N-palmitoyl-L-cysteine.","definition_xrefs":["PubMed:9593755","PubMed:4575979","PubMed:9056182","RESID:AA0060","PubMed:10896212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"palmitoylated-L-cysteine","termid":"MOD:01684"},{"relation_name":"is_a","term_name":"alpha-amino palmitoylated residue","termid":"MOD:01685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-palmitoyl-L-cysteine","synonyms":[{"name":"(2R)-2-hexadecanoylamino-3-sulfanylpropanoic acid","type":"exact"},{"name":"2-hexadecanamido-3-sulfanylpropanoic acid","type":"exact"},{"name":"2-hexadecanoylamino-3-mercaptopropanoic acid","type":"exact"},{"name":"LIPID N-palmitoyl cysteine","type":"exact"},{"name":"N-(1-oxahexadecyl)-L-cysteine","type":"exact"},{"name":"N-hexadecanoylated L-cysteine","type":"exact"},{"name":"N-palmitoyl-L-cysteine","type":"exact"},{"name":"N-palmitoylated L-cysteine","type":"exact"},{"name":"NPamCys","type":"exact"},{"name":"Palmitoyl","type":"related"},{"name":"Palmitoylation","type":"related"}],"termid":"MOD:00069"}


id: PBO:0072671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor transporter protein 4","termid":"PBO:0072671"}


id: PBO:0045805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EDRF1 divergent transcript","termid":"PBO:0045805"}


id: GO:0060115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes committed to become a vestibular receptor cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear receptor cell fate commitment","termid":"GO:0060120"},{"relation_name":"part_of","term_name":"vestibular receptor cell differentiation","termid":"GO:0060114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vestibular receptor cell fate commitment","synonyms":[{"name":"vestibular hair cell fate commitment","type":"exact"}],"termid":"GO:0060115"}


id: PBO:0074681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 63C","termid":"PBO:0074681"}


id: PBO:0075389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sp3 transcription factor","termid":"PBO:0075389"}


id: GO:0009781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Processes by which a molecule of water is oxidized during photosynthesis. P680+, the photochemically oxidized reaction-center chlorophyll of PSII, is a strong biological oxidant. The reduction potential of P680+ is more positive than that of water, and thus it can oxidize water to give O2 and H+ ions. The oxygen escapes as a gas while the H+ ions remain in solution inside the thylakoid vesicle.","definition_xrefs":["ISBN:0716743663","GOC:jid","ISBN:0816017360"],"gene_count":0,"genotype_count":0,"name":"obsolete photosynthetic water oxidation (obsolete GO:0009781)","synonyms":[{"name":"photosynthetic water oxidation","type":"exact"}],"termid":"GO:0009781"}


id: PBO:0075338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sortilin related VPS10 domain containing receptor 3","termid":"PBO:0075338"}


id: PATO:0001120
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001120 relative momentum value (obsolete PATO:0001120)","termid":"PATO:0001120"}


id: PBO:0041413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 7 open reading frame 31","termid":"PBO:0041413"}


id: PBO:0056215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member B17","termid":"PBO:0056215"}


id: PBO:0088765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome assembly chaperone, gankyrin","termid":"PBO:0088765"}


id: PBO:0000835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR51b (predicted)","termid":"PBO:0000835"}


id: PBO:0110400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PERP pseudogene 3","termid":"PBO:0110400"}


id: PBO:0054903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2317","termid":"PBO:0054903"}


id: FYPO:0006806
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a galactosyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal galactosyltransferase activity","termid":"FYPO:0006805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"decreased galactosyltransferase activity","synonyms":[{"name":"reduced galactosyltransferase activity","type":"exact"}],"termid":"FYPO:0006806"}


id: PBO:0050227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 5","termid":"PBO:0050227"}


id: PBO:0080616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 53","termid":"PBO:0080616"}


id: GO:0009264
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"},{"annotations":[95048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a base linked to a deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide catabolic process","termid":"GO:0009166"},{"relation_name":"is_a","term_name":"deoxyribonucleotide metabolic process","termid":"GO:0009262"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"deoxyribonucleotide catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"deoxyribonucleotide breakdown","type":"exact"},{"name":"deoxyribonucleotide catabolism","type":"exact"},{"name":"deoxyribonucleotide degradation","type":"exact"}],"termid":"GO:0009264","terms_by_termid":{"GO:0035863":null,"GO:0046081":null}}


id: GO:0031728
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CCR3 chemokine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CCR chemokine receptor binding","termid":"GO:0048020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"CCR3 chemokine receptor binding","synonyms":[{"name":"CCR3 chemokine receptor ligand","type":"narrow"},{"name":"eosinophil eotaxin receptor binding","type":"exact"}],"termid":"GO:0031728"}


id: GO:0050941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of pigment cell differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"negative regulation of developmental pigmentation","termid":"GO:0048086"},{"relation_name":"is_a","term_name":"regulation of pigment cell differentiation","termid":"GO:0050932"},{"relation_name":"negatively_regulates","term_name":"pigment cell differentiation","termid":"GO:0050931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pigment cell differentiation","synonyms":[{"name":"down regulation of pigment cell differentiation","type":"exact"},{"name":"down-regulation of pigment cell differentiation","type":"exact"},{"name":"downregulation of pigment cell differentiation","type":"exact"},{"name":"inhibition of pigment cell differentiation","type":"narrow"}],"termid":"GO:0050941"}


id: GO:0002569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of variable numbers of random nucleotides by terminal deoxytransferase in the N regions of heavy chain immunoglobulin and T cell receptor genes. N regions are found at the V-D, D-D, V-J, and D-J recombinational junctions, depending on the immune receptor gene.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors","termid":"GO:0002200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic diversification of immune receptors by N region addition","termid":"GO:0002569"}


id: PBO:0048996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPC5 antisense RNA 2","termid":"PBO:0048996"}


id: GO:0002784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antimicrobial peptide production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of production of molecular mediator of immune response","termid":"GO:0002700"},{"relation_name":"is_a","term_name":"regulation of antimicrobial humoral response","termid":"GO:0002759"},{"relation_name":"regulates","term_name":"antimicrobial peptide production","termid":"GO:0002775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of antimicrobial peptide production","termid":"GO:0002784"}


id: GO:1905758
data:
  {"annotated_genes":["SJAG_04597","SJAG_04776","SJAG_04666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83612,88467,90473],"is_not":false,"summary":null,"term":"GO:1905758"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of primary cell septum biogenesis.","definition_xrefs":["PMID:27898700","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cytokinetic process","termid":"GO:1903438"},{"relation_name":"is_a","term_name":"regulation of primary cell septum biogenesis","termid":"GO:1905756"},{"relation_name":"positively_regulates","term_name":"primary cell septum biogenesis","termid":"GO:0031671"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0000281","GO:0007049"],"is_obsolete":false,"name":"positive regulation of primary cell septum biogenesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905758","terms_by_termid":{"GO:1905758":null}}


id: PBO:0112744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Telomerase Cajal body protein WRAP53 orthlog, Gnr1","termid":"PBO:0112744"}


id: GO:0032335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of activin from a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"regulates","term_name":"activin secretion","termid":"GO:0032333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of activin secretion","termid":"GO:0032335"}


id: PBO:0027778
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_rate_of_mitotic_spindle_elongation","termid":"PBO:0027778"}


id: PBO:0000383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGEF Gef1","termid":"PBO:0000383"}


id: GO:0034195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-galactonate, the anion of L-galactonic acid.","definition_xrefs":["GOC:mah","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate catabolic process","termid":"GO:0016052"},{"relation_name":"is_a","term_name":"galactonate catabolic process","termid":"GO:0019584"},{"relation_name":"is_a","term_name":"L-galactonate metabolic process","termid":"GO:0034193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"L-galactonate catabolic process","synonyms":[{"name":"L-galactonate breakdown","type":"exact"},{"name":"L-galactonate catabolism","type":"exact"},{"name":"L-galactonate degradation","type":"exact"}],"termid":"GO:0034195"}


id: GO:0097377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a spinal cord interneuron is directed to a specific target site in response to a combination of attractive and repulsive cues. A spinal cord interneuron is a CNS interneuron located in the spinal cord.","definition_xrefs":["CL:0005000","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interneuron axon guidance","termid":"GO:0097376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal cord interneuron axon guidance","termid":"GO:0097377"}


id: MOD:01599
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Applied Biosystems iTRAQ8plex-118 reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"iTRAQ8plex-118 reporter+balance reagent acylated residue","termid":"MOD:01563"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter fragment","termid":"MOD:01593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-118 reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01599"}


id: GO:0110034
data:
  {"annotated_genes":["SJAG_02481","SJAG_01245","SJAG_02426","SJAG_00266","SJAG_02311"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88135,88799,96500,104021,112456],"is_not":false,"summary":null,"term":"GO:0110034"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the adenylate cyclase-activating glucose-activated G protein-coupled receptor signaling pathway.","definition_xrefs":["GOC:al","PMID:24297439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway","termid":"GO:0106072"},{"relation_name":"is_a","term_name":"regulation of adenylate cyclase-activating glucose-activated G protein-coupled receptor signaling pathway","termid":"GO:0110033"},{"relation_name":"is_a","term_name":"negative regulation of glucose mediated signaling pathway","termid":"GO:1902660"},{"relation_name":"negatively_regulates","term_name":"adenylate cyclase-activating glucose-activated G protein-coupled receptor signaling pathway","termid":"GO:0010619"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_01245":null,"SJAG_02311":null,"SJAG_02426":null,"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of adenylate cyclase-activating glucose-activated G protein-coupled receptor signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of adenylate cyclase-activating glucose-activated G-protein coupled receptor signaling pathway","type":"exact"}],"termid":"GO:0110034","terms_by_termid":{"GO:0110034":null}}


id: PBO:0081019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger C2HC-type containing 1A","termid":"PBO:0081019"}


id: PBO:0029611
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_tapered_cell","termid":"PBO:0029611"}


id: GO:0045753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of acetate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular catabolic process","termid":"GO:0031330"},{"relation_name":"is_a","term_name":"regulation of acetate catabolic process","termid":"GO:0045734"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"acetate catabolic process","termid":"GO:0045733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"negative regulation of acetate catabolic process","synonyms":[{"name":"down regulation of acetate catabolic process","type":"exact"},{"name":"down-regulation of acetate catabolic process","type":"exact"},{"name":"downregulation of acetate catabolic process","type":"exact"},{"name":"inhibition of acetate catabolic process","type":"narrow"},{"name":"negative regulation of acetate breakdown","type":"exact"},{"name":"negative regulation of acetate catabolism","type":"exact"},{"name":"negative regulation of acetate degradation","type":"exact"}],"termid":"GO:0045753"}


id: PBO:0055236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2663","termid":"PBO:0055236"}


id: GO:0071080
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha3-beta1 integrin complex bound to the cell surface protein basigin.","definition_xrefs":["PMID:9360995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alpha3-beta1 integrin-basigin complex","synonyms":[{"name":"ITGA3-ITGB1-BSG complex","type":"narrow"}],"termid":"GO:0071080"}


id: SO:1000027
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transversion from guanine to thymine.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine_to_pyrimidine_transversion","termid":"SO:1000023"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G_to_T_transversion","synonyms":[{"name":"G to T transversion","type":"exact"}],"termid":"SO:1000027"}


id: PR:O14186
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 24 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C4F8.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.11","secondary_identifiers":["UniProtKB:O14186"],"synonyms":[{"name":"Spom972h-WDR24","type":"exact"}],"termid":"PR:O14186"}


id: PBO:0071824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 19","termid":"PBO:0071824"}


id: GO:0006999
data:
  {"annotated_genes":["SJAG_02210","SJAG_03200","SJAG_01834","SJAG_03182","SJAG_03593","SJAG_00840","SJAG_01833"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86194,87768,102201,103824,112538],"is_not":false,"summary":null,"term":"GO:0006999"},{"annotations":[99730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140516"},{"annotations":[103820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051292"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nuclear pore.","definition_xrefs":["GOC:mah","GOC:jid","GOC:dph","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus organization","termid":"GO:0006997"},{"relation_name":"is_a","term_name":"protein-containing complex organization","termid":"GO:0043933"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00840":null,"SJAG_01833":null,"SJAG_01834":null,"SJAG_02210":null,"SJAG_03182":null,"SJAG_03200":null,"SJAG_03593":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nuclear pore organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear pore complex organization and biogenesis","type":"related"},{"name":"nuclear pore organisation","type":"exact"},{"name":"nuclear pore organization and biogenesis","type":"related"}],"termid":"GO:0006999","terms_by_termid":{"GO:0006999":null,"GO:0051292":null,"GO:0140516":null}}


id: PR:O42972
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC20F10.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0588 membrane protein C20F10.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC20F10.02c","synonyms":[{"name":"Spom972h-SPBC20F10.02c","type":"exact"}],"termid":"PR:O42972"}


id: SO:0001893
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature ablation whereby the deleted region includes a transcript feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_ablation","termid":"SO:0001879"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_ablation","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"Jannovar:transcript_ablation","type":"exact"},{"name":"VEP:transcript_ablation","type":"exact"},{"name":"transcript ablation","type":"exact"}],"termid":"SO:0001893"}


id: GO:0019651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of citrate to diacetyl, yielding energy in the form of ATP.","definition_xrefs":["MetaCyc:P126-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"citrate metabolic process","termid":"GO:0006101"},{"relation_name":"is_a","term_name":"non-glycolytic fermentation","termid":"GO:0019662"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"tricarboxylic acid catabolic process","termid":"GO:0072352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150","GO:0006091"],"is_obsolete":false,"name":"citrate catabolic process to diacetyl","synonyms":[{"name":"citrate fermentation to diacetyl","type":"exact"},{"name":"diacetyl fermentation","type":"exact"}],"termid":"GO:0019651"}


id: PBO:0087722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SAGA transcriptional regulatory complex; involved in maintaining the integrity of the complex; mutant displays reduced transcription elongation in the G-less-based run-on (GLRO) assay","termid":"PBO:0087722"}


id: MOD:00561
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["Unimod:211","PubMed:12766232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-ethyl iodoacetamide-d0","synonyms":[{"name":"N-ethyl iodoacetamide-d0","type":"related"},{"name":"NEIAA","type":"related"}],"termid":"MOD:00561"}


id: GO:0039544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by a virus resulting in the hydrolysis of the host RIG-I protein (also known as DDX58) by cleavage of peptide bonds, thereby inhibiting RIG-I signal transduction.","definition_xrefs":["PMID:19628239"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host RIG-I activity by RIG-I proteolysis (obsolete GO:0039544)","synonyms":[{"name":"cleavage of RIG-I by viral proteinase","type":"exact"},{"name":"inhibition by virus of host RIG-I activity by RIG-I proteolysis","type":"related"}],"termid":"GO:0039544"}


id: FYPO:0003142
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to methyl methanesulfonate is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA level during cellular response to methyl methanesulfonate","synonyms":[{"name":"decreased RNA accumulation during cellular response to methyl methanesulfonate","type":"related"},{"name":"decreased RNA level during cellular response to MMS","type":"exact"},{"name":"decreased RNA level during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to methyl methanesulphonate","type":"exact"},{"name":"decreased mRNA level during cellular response to methyl methanesulfonate","type":"narrow"},{"name":"decreased transcript level during cellular response to methyl methanesulfonate","type":"exact"},{"name":"reduced RNA level during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0003142"}


id: GO:2000135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of regulation of secondary heart field cardioblast proliferation.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of regulation of secondary heart field cardioblast proliferation (obsolete GO:2000135)","synonyms":[{"name":"positive regulation of regulation of second heart field cardioblast proliferation","type":"exact"},{"name":"positive regulation of regulation of secondary heart field cardioblast proliferation","type":"exact"}],"termid":"GO:2000135"}


id: GO:1905247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of aspartic-type peptidase activity.","definition_xrefs":["PMID:21745575","GOC:jl","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peptidase activity","termid":"GO:0010952"},{"relation_name":"is_a","term_name":"regulation of aspartic-type peptidase activity","termid":"GO:1905245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of aspartic-type peptidase activity","synonyms":[{"name":"activation of aspartic-type peptidase activity","type":"narrow"},{"name":"up regulation of aspartic-type peptidase activity","type":"exact"},{"name":"up-regulation of aspartic-type peptidase activity","type":"exact"},{"name":"upregulation of aspartic-type peptidase activity","type":"exact"}],"termid":"GO:1905247"}


id: PR:Q10213
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- srs2 gene.","definition_xrefs":["UniProtKB:Q10213","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase srs2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.05","synonyms":[{"name":"Spom972h-srs2","type":"exact"}],"termid":"PR:Q10213"}


id: GO:1902770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of choline O-acetyltransferase activity.","definition_xrefs":["PMID:7576634","GO_REF:0000059","GOC:TermGenie","GOC:mr"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of choline O-acetyltransferase activity (obsolete GO:1902770)","synonyms":[{"name":"down regulation of CHOACTase activity","type":"exact"},{"name":"down regulation of acetyl-CoA:choline O-acetyltransferase activity","type":"exact"},{"name":"down regulation of choline O-acetyltransferase activity","type":"exact"},{"name":"down regulation of choline acetylase activity","type":"exact"},{"name":"down regulation of choline acetyltransferase activity","type":"exact"},{"name":"down-regulation of CHOACTase activity","type":"exact"},{"name":"down-regulation of acetyl-CoA:choline O-acetyltransferase activity","type":"exact"},{"name":"down-regulation of choline O-acetyltransferase activity","type":"exact"},{"name":"down-regulation of choline acetylase activity","type":"exact"},{"name":"down-regulation of choline acetyltransferase activity","type":"exact"},{"name":"downregulation of CHOACTase activity","type":"exact"},{"name":"downregulation of acetyl-CoA:choline O-acetyltransferase activity","type":"exact"},{"name":"downregulation of choline O-acetyltransferase activity","type":"exact"},{"name":"downregulation of choline acetylase activity","type":"exact"},{"name":"downregulation of choline acetyltransferase activity","type":"exact"},{"name":"inhibition of CHOACTase activity","type":"narrow"},{"name":"inhibition of acetyl-CoA:choline O-acetyltransferase activity","type":"narrow"},{"name":"inhibition of choline O-acetyltransferase activity","type":"narrow"},{"name":"inhibition of choline acetylase activity","type":"narrow"},{"name":"inhibition of choline acetyltransferase activity","type":"narrow"},{"name":"negative regulation of CHOACTase activity","type":"exact"},{"name":"negative regulation of acetyl-CoA:choline O-acetyltransferase activity","type":"exact"},{"name":"negative regulation of choline acetylase activity","type":"exact"},{"name":"negative regulation of choline acetyltransferase activity","type":"exact"}],"termid":"GO:1902770"}


id: PBO:0085443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polyphosphatidylinositol phosphatase; dephosphorylates multiple phosphatidylinositol phosphates; involved in trans Golgi network-to-early endosome pathway; hyperosmotic stress causes translocation to actin patches; contains Sac1 and 5-ptase domains; INP53 has a paralog, INP52, that arose from the whole genome duplication","termid":"PBO:0085443"}


id: PBO:0080233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VLDLR antisense RNA 1","termid":"PBO:0080233"}


id: PBO:0070519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 18","termid":"PBO:0070519"}


id: PBO:0043324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC like kinase 2","termid":"PBO:0043324"}


id: GO:0097387
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Simple or compound process of epithelial glial cells with a spherical head that inserts into photoreceptor axons. Capitate projections have only been observed in Brachycera (flies).","definition_xrefs":["PMID:3098431","GOC:mc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell projection","termid":"GO:0097386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"capitate projection","termid":"GO:0097387"}


id: PBO:0064717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 53","termid":"PBO:0064717"}


id: SO:0000618
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"This type of promoter recruits RNA pol III to transcribe genes mainly for t-RNA. This promoter is intragenic and includes an A box and a B box.","definition_xrefs":["PMID:12381659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNApol_III_promoter","termid":"SO:0000171"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNApol_III_promoter_type_2","synonyms":[{"name":"RNApol III promoter type 2","type":"exact"},{"name":"tRNA promoter","type":"related"}],"termid":"SO:0000618"}


id: PR:Q9P5N2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- aat1 gene.","definition_xrefs":["UniProtKB:Q9P5N2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid transporter 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC359.03c","synonyms":[{"name":"Spom972h-aat1","type":"exact"}],"termid":"PR:Q9P5N2"}


id: FYPO:0002344
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity phleomycin. Cells stop growing (and may die) at a concentration of phleomycin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to DNA damaging agents","termid":"FYPO:0000266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002683","FYPO:0000003","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to phleomycin","synonyms":[{"name":"hypersensitive to phleomycin","type":"exact"},{"name":"sensitive to phleomycin during mitotic cell cycle","type":"related"},{"name":"sensitive to phleomycin during vegetative growth","type":"exact"}],"termid":"FYPO:0002344"}


id: GO:0009153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of purine deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a purine base linked to a deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide biosynthetic process","termid":"GO:0006164"},{"relation_name":"is_a","term_name":"purine deoxyribonucleotide metabolic process","termid":"GO:0009151"},{"relation_name":"is_a","term_name":"2'-deoxyribonucleotide biosynthetic process","termid":"GO:0009265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"purine deoxyribonucleotide biosynthetic process","synonyms":[{"name":"purine deoxyribonucleotide anabolism","type":"exact"},{"name":"purine deoxyribonucleotide biosynthesis","type":"exact"},{"name":"purine deoxyribonucleotide formation","type":"exact"},{"name":"purine deoxyribonucleotide synthesis","type":"exact"}],"termid":"GO:0009153"}


id: GO:1900448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of pyrimidine nucleotide biosynthesis by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of pyrimidine nucleotide biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900448)","termid":"GO:1900448"}


id: PBO:0074473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"smoothelin like 2","termid":"PBO:0074473"}


id: PBO:0060186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 5B, oligomeric mucus/gel-forming","termid":"PBO:0060186"}


id: GO:0075251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process which specific outcome is the formation of an asexual, dikaryotic, often rusty-colored spore, produced in a structure called a uredinium; mostly found in the rust fungus.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"uredospore formation","synonyms":[{"name":"urediniospore formation","type":"exact"},{"name":"ureidospore formation","type":"exact"}],"termid":"GO:0075251"}


id: GO:0061791
data:
  {"annotated_genes":["SJAG_02384","SJAG_00031","SJAG_02848"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100708],"is_not":false,"summary":null,"term":"GO:0061791"},{"annotations":[98834,96024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990606"}]},"cv_name":"molecular_function","definition":"A motor activity driven by GTP hydrolysis.","definition_xrefs":["GOC:vw","GOC:dph","PMID:11242086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal motor activity","termid":"GO:0003774"},{"relation_name":"is_a","term_name":"GTPase activity","termid":"GO:0003924"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_02384":null,"SJAG_02848":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003924"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003774"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003924","GO:0016787","GO:0003774","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"GTPase motor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061791","terms_by_termid":{"GO:0061791":null,"GO:1990606":null}}


id: GO:0031321
data:
  {"annotated_genes":["SJAG_05309","SJAG_02248","SJAG_02241","SJAG_03915","SJAG_04901","SJAG_03688","SJAG_04615","SJAG_00663","SJAG_04483","SJAG_03536","SJAG_03746","SJAG_02529","SJAG_04080","SJAG_04781","SJAG_00826","SJAG_02320","SJAG_02736","SJAG_03250","SJAG_00114","SJAG_04470","SJAG_04922","SJAG_00486","SJAG_04275","SJAG_00405","SJAG_04010","SJAG_00971","SJAG_01769","SJAG_04271","SJAG_00821","SJAG_01483"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87549,93649,101017,105351,106168],"is_not":false,"summary":null,"term":"GO:0031321"},{"annotations":[113002,114894,97767,109997,95891,95960,106169,87342,101333,94885,91431,95890,93609,115078,93650,114596,103437],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032120"},{"annotations":[102879,100192,98982,93610,95892,88339,92936,103773,95893,109998],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031322"},{"annotations":[90563,112038,95895,95894,96178,102056],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"During ascospore formation, the process in which each haploid nucleus becomes encapsulated by a double membrane.","definition_xrefs":["GOC:mah","PMID:14702385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"ascospore formation","termid":"GO:0030437"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00405":null,"SJAG_00486":null,"SJAG_00663":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_01483":null,"SJAG_01769":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02529":null,"SJAG_02736":null,"SJAG_03250":null,"SJAG_03536":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04271":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04483":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04901":null,"SJAG_04922":null,"SJAG_05309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030437"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0030437","GO:0044085","GO:0007049"],"is_obsolete":false,"name":"ascospore-type prospore assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ascospore-type prospore formation","type":"exact"},{"name":"forespore formation","type":"related"}],"termid":"GO:0031321","terms_by_termid":{"GO:0031321":null,"GO:0031322":null,"GO:0032120":null,"GO:0070583":null}}


id: GO:1904998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of leukocyte adhesion to arterial endothelial cell.","definition_xrefs":["PMID:22267480","GOC:bc","GOC:BHF_miRNA","GO_REF:0000058","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte adhesion to vascular endothelial cell","termid":"GO:1904995"},{"relation_name":"is_a","term_name":"regulation of leukocyte adhesion to arterial endothelial cell","termid":"GO:1904997"},{"relation_name":"negatively_regulates","term_name":"leukocyte adhesion to arterial endothelial cell","termid":"GO:0061757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of leukocyte adhesion to arterial endothelial cell","synonyms":[{"name":"down regulation of leukocyte adhesion to arterial endothelial cell","type":"exact"},{"name":"down-regulation of leukocyte adhesion to arterial endothelial cell","type":"exact"},{"name":"downregulation of leukocyte adhesion to arterial endothelial cell","type":"exact"},{"name":"inhibition of leukocyte adhesion to arterial endothelial cell","type":"narrow"}],"termid":"GO:1904998"}


id: PBO:0030660
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_Man9GlcNAc_level","termid":"PBO:0030660"}


id: PBO:0002218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 5 (predicted)","termid":"PBO:0002218"}


id: GO:0042683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that restricts, stops or prevents a cell from specifying into a compound eye cone cell.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"regulation of compound eye cone cell fate specification","termid":"GO:0042682"},{"relation_name":"negatively_regulates","term_name":"compound eye cone cell fate specification","termid":"GO:0042679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of compound eye cone cell fate specification","secondary_identifiers":["GO:0010000"],"synonyms":[{"name":"down regulation of cone cell fate specification","type":"broad"},{"name":"down-regulation of cone cell fate specification","type":"broad"},{"name":"downregulation of cone cell fate specification","type":"broad"},{"name":"inhibition of cone cell fate specification","type":"broad"},{"name":"suppression of cone cell fate","type":"broad"}],"termid":"GO:0042683"}


id: PBO:0049298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase mu 2","termid":"PBO:0049298"}


id: PBO:0004126
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.19","termid":"PBO:0004126"}


id: PBO:0075730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 9 pseudogene 1","termid":"PBO:0075730"}


id: GO:0043426
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to Myogenic Regulatory Factor (MRF), a member of the basic Helix-Loop-Helix (bHLH) superfamily of transcription factors.","definition_xrefs":["PMID:10966875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bHLH transcription factor binding","termid":"GO:0043425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"MRF binding","secondary_identifiers":["GO:0051578","GO:0051576","GO:0051577","GO:0051579"],"synonyms":[{"name":"Mrf4 binding","type":"narrow"},{"name":"Myf5 binding","type":"narrow"},{"name":"MyoD binding","type":"narrow"},{"name":"myogenin binding","type":"narrow"}],"termid":"GO:0043426"}


id: MOD:02048
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-histidine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-histidine residue","synonyms":[{"name":"XlnkHis","type":"exact"}],"termid":"MOD:02048"}


id: PATO:0001110
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001110 absolute density value (obsolete PATO:0001110)","termid":"PATO:0001110"}


id: PBO:0003344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tea1 anchoring protein Mod5","termid":"PBO:0003344"}


id: PBO:0084270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein; localized to late Golgi vesicles along with the v-SNARE Tlg2p; may interact with ribosomes, based on co-purification experiments; may have a role in intracellular sterol transport","termid":"PBO:0084270"}


id: PBO:0086665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by expression profiling and mass spectrometry; SWAT-GFP fusion protein localizes to the nucleus","termid":"PBO:0086665"}


id: PBO:0088148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar transporter that mediates zinc transport into the vacuole; overexpression confers resistance to cobalt and rhodium; protein abundance increases in response to DNA replication stress; COT1 has a paralog, ZRC1, that arose from the whole genome duplication","termid":"PBO:0088148"}


id: PBO:0082454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-4 methyl sterol oxidase; catalyzes the first of three steps required to remove two C-4 methyl groups from an intermediate in ergosterol biosynthesis; mutants accumulate the sterol intermediate 4,4-dimethylzymosterol; human MSMO1 functionally complements the growth defect caused by repression of ERG25 expression","termid":"PBO:0082454"}


id: PBO:0083001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-2-hydroxyglutarate dehydrogenase, and minor D-lactate dehydrogenase; mitochondrial matrix protein that oxidizes D-2-hydroxyglutarate (D-2HG), an oncometabolite, to alpha-ketoglutarate with a minor role in lactate catabolism; located in the mitochondrial matrix","termid":"PBO:0083001"}


id: GO:0001916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T cell mediated cytotoxicity.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte mediated cytotoxicity","termid":"GO:0001912"},{"relation_name":"is_a","term_name":"regulation of T cell mediated cytotoxicity","termid":"GO:0001914"},{"relation_name":"is_a","term_name":"positive regulation of T cell mediated immunity","termid":"GO:0002711"},{"relation_name":"positively_regulates","term_name":"T cell mediated cytotoxicity","termid":"GO:0001913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell mediated cytotoxicity","synonyms":[{"name":"positive regulation of T cell mediated cell killing","type":"exact"},{"name":"activation of T cell mediated cytotoxicity","type":"narrow"},{"name":"positive regulation of T cell mediated apoptosis","type":"exact"},{"name":"positive regulation of T cell mediated cell death","type":"exact"},{"name":"positive regulation of T cell mediated cytolysis","type":"related"},{"name":"positive regulation of T lymphocyte mediated cytotoxicity","type":"exact"},{"name":"positive regulation of T-cell mediated apoptosis","type":"exact"},{"name":"positive regulation of T-cell mediated cell death","type":"exact"},{"name":"positive regulation of T-cell mediated cell killing","type":"exact"},{"name":"positive regulation of T-cell mediated cytolysis","type":"related"},{"name":"positive regulation of T-cell mediated cytotoxicity","type":"exact"},{"name":"positive regulation of T-lymphocyte mediated cytotoxicity","type":"exact"},{"name":"stimulation of T cell mediated cytotoxicity","type":"narrow"},{"name":"up regulation of T cell mediated cytotoxicity","type":"exact"},{"name":"up-regulation of T cell mediated cytotoxicity","type":"exact"},{"name":"upregulation of T cell mediated cytotoxicity","type":"exact"}],"termid":"GO:0001916"}


id: PBO:0091215
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pdc2-Repressed lncRNA","termid":"PBO:0091215"}


id: FYPO:0007892
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which histone exchange at subtelomeric heterochromatin is increased. Histone exchange is replacement, within chromatin, of resident histones or histone subunits with alternative, sometimes variant, histones or subunits.","definition_xrefs":["PomBase:vw","PMID:34731638"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone turnover","termid":"FYPO:0007472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased histone turnover at subtelomeric heterochromatin","termid":"FYPO:0007892"}


id: GO:0097560
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cilium (also called flagellum) found in Giardia species (trophozoite stage). It is nucleated by the left caudal basal body, extending cytoplasmically and exiting at the posterior end of the cell body.","definition_xrefs":["ISBN:9780124260207","PMID:16607022","GOC:giardia","PMID:5961344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"9+2 motile cilium","termid":"GO:0097729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"left caudal flagellum","synonyms":[{"name":"left caudal cilium","type":"exact"}],"termid":"GO:0097560"}


id: PBO:0076602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1D22A divergent transcript","termid":"PBO:0076602"}


id: PBO:0079996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 34","termid":"PBO:0079996"}


id: PBO:0063921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIK3IP1 divergent transcript","termid":"PBO:0063921"}


id: GO:2000745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of transcription from RNA polymerase III promoter that is involved in smooth muscle cell differentiation.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase III promoter involved in smooth muscle cell differentiation (obsolete GO:2000745)","synonyms":[{"name":"activation of transcription from RNA polymerase III promoter of nonstriated muscle cell differentiation","type":"related"},{"name":"activation of transcription from RNA polymerase III promoter of smooth muscle cell differentiation","type":"related"},{"name":"positive regulation of transcription from Pol III promoter of nonstriated muscle cell differentiation","type":"exact"},{"name":"positive regulation of transcription from Pol III promoter of smooth muscle cell differentiation","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase III promoter involved in smooth muscle cell differentiation","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase III promoter of nonstriated muscle cell differentiation","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase III promoter of smooth muscle cell differentiation","type":"exact"},{"name":"stimulation of transcription from RNA polymerase III promoter of nonstriated muscle cell differentiation","type":"related"},{"name":"stimulation of transcription from RNA polymerase III promoter of smooth muscle cell differentiation","type":"related"},{"name":"up regulation of transcription from RNA polymerase III promoter of nonstriated muscle cell differentiation","type":"exact"},{"name":"up regulation of transcription from RNA polymerase III promoter of smooth muscle cell differentiation","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase III promoter of nonstriated muscle cell differentiation","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase III promoter of smooth muscle cell differentiation","type":"exact"},{"name":"upregulation of transcription from RNA polymerase III promoter of nonstriated muscle cell differentiation","type":"exact"},{"name":"upregulation of transcription from RNA polymerase III promoter of smooth muscle cell differentiation","type":"exact"}],"termid":"GO:2000745"}


id: PBO:0012863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Csl4","termid":"PBO:0012863"}


id: PBO:0039947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AT-rich interaction domain 5B","termid":"PBO:0039947"}


id: GO:0043522
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a leucine zipper domain, a protein secondary structure exhibiting a periodic repetition of leucine residues at every seventh position over a distance covering eight helical turns.","definition_xrefs":["GOC:jl","InterPro:IPR002158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LRR domain binding","termid":"GO:0030275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"leucine zipper domain binding","synonyms":[{"name":"leucine zipper binding","type":"exact"}],"termid":"GO:0043522"}


id: PBO:0089779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex linker Mto1","termid":"PBO:0089779"}


id: GO:2001018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of retrograde axon cargo transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"regulation of retrograde axon cargo transport","termid":"GO:2001017"},{"relation_name":"negatively_regulates","term_name":"retrograde axonal transport","termid":"GO:0008090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of retrograde axon cargo transport","synonyms":[{"name":"negative regulation of retrograde axonal transport","type":"exact"}],"termid":"GO:2001018"}


id: PBO:0066434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulated endocrine specific protein 18","termid":"PBO:0066434"}


id: GO:0015881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of creatine across a membrane.","definition_xrefs":["GOC:pr","GOC:TermGenie","GO_REF:0000069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"modified amino acid transport","termid":"GO:0072337"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"creatine transmembrane transport","secondary_identifiers":["GO:1902598"],"synonyms":[{"name":"creatine transport","type":"broad"}],"termid":"GO:0015881"}


id: PBO:0081159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFPM2 antisense RNA 1","termid":"PBO:0081159"}


id: PBO:0076754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teratocarcinoma-derived growth factor 1 pseudogene 4","termid":"PBO:0076754"}


id: PR:P87154
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA polymerase epsilon catalytic subunit A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10670:SF0","OMA:SCHPO03630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon catalytic subunit A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.13c","secondary_identifiers":["UniProtKB:P87154"],"synonyms":[{"name":"DNA polymerase II subunit A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLE","type":"exact"}],"termid":"PR:P87154"}


id: PBO:0070122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 36 pseudogene","termid":"PBO:0070122"}


id: PBO:0076783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tectonin beta-propeller repeat containing 1","termid":"PBO:0076783"}


id: GO:0003407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the neural retina over time from its initial formation to the mature structure. The neural retina is the part of the retina that contains neurons and photoreceptor cells.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"retina development in camera-type eye","termid":"GO:0060041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural retina development","termid":"GO:0003407"}


id: GO:1902633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate.","definition_xrefs":["PMID:22562153","GOC:TermGenie","GOC:di","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol metabolic process","termid":"GO:0046488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate metabolic process","synonyms":[{"name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate metabolism","type":"exact"}],"termid":"GO:1902633"}


id: GO:1900098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of plasma cell differentiation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of B cell differentiation","termid":"GO:0045577"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"plasma cell differentiation","termid":"GO:0002317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of plasma cell differentiation","synonyms":[{"name":"regulation of plasma cell development","type":"related"}],"termid":"GO:1900098"}


id: PBO:0081857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 790","termid":"PBO:0081857"}


id: MOD:00790
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod - isotopic label ICPL method - The paper describes an H/D labeling strategy whereas the commercial product follows a C/13C labeling strategy. The digest is typically applied AFTER ICPL_light/heavy labeling, only Protein N-term labeling and Lys-specific labeling is applied.","definition_xrefs":["PubMed:15602776","URL:http://www.serva.de/products/sheets/39230-E.pdf","Unimod:365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, light form","synonyms":[{"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, light form","type":"related"},{"name":"ICPL","type":"related"}],"termid":"MOD:00790"}


id: PBO:0055364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2793","termid":"PBO:0055364"}


id: GO:0080049
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-gulono-1,4-lactone + 2 ferricytochrome c = L-ascorbate + 2 ferrocytochrome c.","definition_xrefs":["RHEA:47248","PMID:30112455","PMID:18190525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, cytochrome as acceptor","termid":"GO:0016632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"L-gulono-1,4-lactone dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-1439"],"termid":"GO:0080049"}


id: PBO:0061875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OOEP pseudogene 2","termid":"PBO:0061875"}


id: PBO:0053260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIF antisense RNA 1","termid":"PBO:0053260"}


id: PBO:0076459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAL bHLH transcription factor 2","termid":"PBO:0076459"}


id: GO:0004300
data:
  {"annotated_genes":["SJAG_01300"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102158"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-hydroxy-fatty acyl-CoA = a enoyl-CoA + H2O. This reaction usually occurs in the reverse direction, leading to the reduction of the double bound of enoyl-CoA in position 2 or 3. Specific reactions catalyzed include: a 4-saturated-(3S)-3-hydroxyacyl-CoA = a (3E)-enoyl-CoA + H2O and a (3S)-3-hydroxyacyl-CoA = a (2E)-enoyl-CoA + H2O.","definition_xrefs":["EC:4.2.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01300":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"enoyl-CoA hydratase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-70870","GO:0016510","Reactome:R-HSA-77277","Reactome:R-HSA-77256","Reactome:R-HSA-77344","Reactome:R-HSA-70830","Reactome:R-HSA-77333","Reactome:R-HSA-77314","Reactome:R-HSA-77301","MetaCyc:ENOYL-COA-HYDRAT-RXN","Reactome:R-HSA-77325"],"synonyms":[{"name":"(3S)-3-hydroxyacyl-CoA hydro-lyase activity","type":"related"},{"name":"2-enoyl-CoA hydratase activity","type":"related"},{"name":"2-octenoyl coenzyme A hydrase activity","type":"related"},{"name":"3-hydroxy-fatty acyl-CoA dehydratase","type":"exact"},{"name":"3-hydroxyacyl-CoA dehydratase","type":"exact"},{"name":"acyl coenzyme A hydrase activity","type":"related"},{"name":"beta-hydroxyacid dehydrase activity","type":"related"},{"name":"beta-hydroxyacyl-CoA dehydrase activity","type":"related"},{"name":"enol-CoA hydratase activity","type":"related"},{"name":"enoyl hydrase activity","type":"related"},{"name":"short-chain enoyl-CoA hydratase activity","type":"exact"},{"name":"unsaturated acyl-CoA hydratase activity","type":"related"}],"termid":"GO:0004300","terms_by_termid":{"GO:0102158":null}}


id: GO:0009995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The recognition of soluble molecules in the environment.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"soluble molecule recognition","termid":"GO:0009995"}


id: GO:0034113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell to a cell of a different type via adhesion molecules.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"heterotypic cell-cell adhesion","termid":"GO:0034113"}


id: GO:0038046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an enkephalin, and transmitting the signal across the membrane by activating an associated G-protein. A enkephalin is a pentapeptide (Tyr-Gly-Gly-Phe-Met or Tyr-Gly-Gly-Phe-Leu) involved in regulating nociception in the body.","definition_xrefs":["GOC:bf","Wikipedia:Enkephalin"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled opioid receptor activity","termid":"GO:0004985"},{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled enkephalin receptor activity","synonyms":[{"name":"delta-opioid receptor activity","type":"related"},{"name":"enkephalin receptor activity","type":"broad"}],"termid":"GO:0038046"}


id: PR:O59676
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59676"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain-containing protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.13","synonyms":[{"name":"Spom972h-pdp1","type":"exact"},{"name":"set9-associated factor pdp1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59676"}


id: GO:0018500
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: trans-9R,10R-dihydrodiolphenanthrene + NAD+ = NADH + H+ + 9,10-dihydroxyphenanthrene.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-9R,10R-dihydrodiolphenanthrene dehydrogenase activity (obsolete GO:0018500)","termid":"GO:0018500"}


id: PBO:0110420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGFBRAP1 antisense RNA 1","termid":"PBO:0110420"}


id: PBO:0061856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactomedin like 1","termid":"PBO:0061856"}


id: PBO:0060181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 2, oligomeric mucus/gel-forming","termid":"PBO:0060181"}


id: GO:1990732
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A non-membrane-bounded organelle found within the chloroplasts of algae and hornworts; responsible for carbon dioxide fixation.","definition_xrefs":["GOC:cjm","GOC:pr","PMID:23345319","Wikipedia:Pyrenoid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"pyrenoid","termid":"GO:1990732"}


id: GO:0097081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to a vascular smooth muscle cell fate and their capacity to differentiate into vascular smooth muscle cells. A vascular smooth muscle cell is a non-striated, elongated, spindle-shaped cell found lining the blood vessels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell fate commitment","termid":"GO:0042693"},{"relation_name":"part_of","term_name":"vascular associated smooth muscle cell differentiation","termid":"GO:0035886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle cell fate commitment","synonyms":[{"name":"vascular smooth muscle cell fate commitment","type":"exact"}],"termid":"GO:0097081"}


id: FYPO:0002611
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a lower extent than normal at subtelomeric regions during S phase of the mitotic cell cycle. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0000002","FYPO:0002274","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased histone H2A phosphorylation at subtelomeric heterochromatin during mitotic S phase","synonyms":[{"name":"decreased histone H2A phosphorylation at subtelomere during mitotic S phase","type":"exact"},{"name":"decreased histone H2A phosphorylation at subtelomeric heterochromatin during S phase during vegetative growth","type":"exact"},{"name":"reduced histone H2A phosphorylation at subtelomeric heterochromatin during mitotic S phase","type":"exact"}],"termid":"FYPO:0002611"}


id: GO:0005780
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the intraperoxisomal membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:jl","GOC:dos","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"peroxisomal membrane","termid":"GO:0005778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005777"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005777","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of intraperoxisomal membrane","synonyms":[{"name":"extrinsic to intraperoxisomal membrane","type":"exact"},{"name":"intra-peroxisomal peripheral membrane","type":"related"}],"termid":"GO:0005780"}


id: PATO:0000061
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000061 relative pattern (obsolete PATO:0000061)","termid":"PATO:0000061"}


id: PBO:0053777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1023","termid":"PBO:0053777"}


id: GO:0080058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The protein modification process in which a glutathione molecule is removed from a protein amino acid by breaking a disulfide linkage.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein deglutathionylation","synonyms":[{"name":"protein amino acid deglutathionylation","type":"exact"}],"termid":"GO:0080058"}


id: PBO:0030152
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_mercury","termid":"PBO:0030152"}


id: PBO:0059301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L49","termid":"PBO:0059301"}


id: PBO:0059659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 25","termid":"PBO:0059659"}


id: PBO:0058796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7702","termid":"PBO:0058796"}


id: GO:0004139
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde.","definition_xrefs":["EC:4.1.2.4","RHEA:12821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"deoxyribose-phosphate aldolase activity","secondary_identifiers":["KEGG_REACTION:R01066","Reactome:R-HSA-6787321","MetaCyc:DEOXYRIBOSE-P-ALD-RXN"],"synonyms":[{"name":"deoxyriboaldolase activity","type":"related"},{"name":"2-deoxy-D-ribose-5-phosphate acetaldehyde-lyase (D-glyceraldehyde-3-phosphate-forming)","type":"related"},{"name":"2-deoxy-D-ribose-5-phosphate acetaldehyde-lyase activity","type":"related"},{"name":"2-deoxyribose-5-phosphate aldolase activity","type":"related"},{"name":"deoxyribose-5-phosphate aldolase activity","type":"related"},{"name":"phosphodeoxyriboaldolase activity","type":"related"}],"termid":"GO:0004139"}


id: PBO:0072223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S19 pseudogene 6","termid":"PBO:0072223"}


id: GO:0140759
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + histone H3 L-lysine (position 56) = S-adenosyl-L-homocysteine + histone H3 N6-methyl-L-lysine (position 56). This reaction is the addition of a methyl group to the lysine residue at position 56 of the histone H3 protein.","definition_xrefs":["PMID:23451023","PMID:28743002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lysine N-methyltransferase activity","termid":"GO:0016279"},{"relation_name":"is_a","term_name":"histone H3 methyltransferase activity","termid":"GO:0140938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0008276","GO:0003674","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"histone H3K56 methyltransferase activity","synonyms":[{"name":"histone H3K56 methylase activity","type":"exact"},{"name":"histone lysine N-methyltransferase activity (H3-K56 specific)","type":"exact"},{"name":"histone methyltransferase activity (H3-K56 specific)","type":"exact"},{"name":"histone-H3K56 methyltransferase activity","type":"exact"}],"termid":"GO:0140759"}


id: PBO:0053448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 396","termid":"PBO:0053448"}


id: PBO:0027892
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete_mitotic_sister_chromatid_segregation,_with_unseparated_DNA_and_centromeric_DNA_associated_with_spindle","termid":"PBO:0027892"}


id: PBO:0091351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial expression network (MIOREX) component Mrx11","termid":"PBO:0091351"}


id: PBO:0050980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 27","termid":"PBO:0050980"}


id: PBO:0062502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily G member 2 pseudogene","termid":"PBO:0062502"}


id: GO:0050649
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: testosterone + donor-H2 + O2 = 6-beta-hydroxytestosterone + H2O.","definition_xrefs":["GOC:ai","PMID:11726664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"testosterone 6-beta-hydroxylase activity","synonyms":[{"name":"testosterone 6b-hydroxylase activity","type":"exact"}],"termid":"GO:0050649"}


id: PBO:0038445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aralkylamine N-acetyltransferase","termid":"PBO:0038445"}


id: GO:0004407
data:
  {"annotated_genes":["SJAG_03844","SJAG_04039","SJAG_03627","SJAG_00581","SJAG_04186","SJAG_01075"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93287,105517,108172],"is_not":false,"summary":null,"term":"GO:0004407"},{"annotations":[105518,100257,108173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031078"},{"annotations":[100258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990162"},{"annotations":[105519,100259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032129"},{"annotations":[105520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140937"},{"annotations":[100260,105521,93288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034739"},{"annotations":[105522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180033"},{"annotations":[105523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180032"},{"annotations":[86120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032041"},{"annotations":[86121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140765"},{"annotations":[100262,110487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046969"},{"annotations":[100263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046970"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone N6-acetyl-L-lysine + H2O = histone L-lysine + acetate. This reaction represents the removal of an acetyl group from a histone, a class of proteins complexed to DNA in chromatin and chromosomes.","definition_xrefs":["PMID:9893272","RHEA:58196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"protein lysine deacetylase activity","termid":"GO:0033558"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00581":null,"SJAG_01075":null,"SJAG_03627":null,"SJAG_03844":null,"SJAG_04039":null,"SJAG_04186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0140096","GO:0033558","GO:0003824","GO:0016810","GO:0019213","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"histone deacetylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2545253","Reactome:R-HSA-427514","Reactome:R-HSA-3769447","Reactome:R-HSA-433672","EC:3.5.1.98","Reactome:R-HSA-2545203","Reactome:R-HSA-3777129","Reactome:R-HSA-6805650","Reactome:R-HSA-3782655","MetaCyc:3.5.1.98-RXN","Reactome:R-HSA-3782637"],"termid":"GO:0004407","terms_by_termid":{"GO:0004407":null,"GO:0031078":null,"GO:0032041":null,"GO:0032129":null,"GO:0034739":null,"GO:0046969":null,"GO:0046970":null,"GO:0140765":null,"GO:0140937":null,"GO:0180032":null,"GO:0180033":null,"GO:1990162":null}}


id: GO:0050093
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methanol + NAD+ = formaldehyde + H+ + NADH.","definition_xrefs":["RHEA:19401","EC:1.1.1.244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NAD+) activity","termid":"GO:0004022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"methanol dehydrogenase (NAD+) activity","secondary_identifiers":["KEGG_REACTION:R00605","MetaCyc:METHANOL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"methanol dehydrogenase activity","type":"broad"},{"name":"methanol:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0050093"}


id: GO:0050738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a fructosyl group to an acceptor molecule, typically another carbohydrate or a lipid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"fructosyltransferase activity","termid":"GO:0050738"}


id: PBO:0024483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec14 cytosolic factor family, glycerophospholipid-transfer protein Crs103 (predicted)","termid":"PBO:0024483"}


id: PBO:0005812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metacaspase Pca1","termid":"PBO:0005812"}


id: PBO:0004614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 implicated in trancription (predicted)","termid":"PBO:0004614"}


id: GO:0098824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The sulfation of peptidyl-cysteine to form S-sulfo-L-cysteine.","definition_xrefs":["RESID:AA0171"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-cysteine sulfation (obsolete GO:0098824)","termid":"GO:0098824"}


id: PR:Q09900
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3802 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L38-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30D11.12","synonyms":[{"name":"Spom972h-rpl3802","type":"exact"}],"termid":"PR:Q09900"}


id: GO:0032483
data:
  {"annotated_genes":["SJAG_03488","SJAG_04329"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69186,112576],"is_not":false,"summary":null,"term":"GO:0032483"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Rab protein signal transduction.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small GTPase mediated signal transduction","termid":"GO:0051056"},{"relation_name":"regulates","term_name":"Rab protein signal transduction","termid":"GO:0032482"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03488":null,"SJAG_04329":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of Rab protein signal transduction","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0032483","terms_by_termid":{"GO:0032483":null}}


id: PBO:0052979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactamase beta 2","termid":"PBO:0052979"}


id: GO:0009661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the chromoplast. A chromoplast is a plastid containing pigments other than chlorophyll, usually yellow and orange carotenoid pigments.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid organization","termid":"GO:0009657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chromoplast organization","synonyms":[{"name":"chromoplast organisation","type":"exact"},{"name":"chromoplast organization and biogenesis","type":"related"}],"termid":"GO:0009661"}


id: PBO:0045533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deltex E3 ubiquitin ligase 3L","termid":"PBO:0045533"}


id: GO:0051209
data:
  {"annotated_genes":["SJAG_03850","SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89435],"is_not":false,"summary":null,"term":"GO:0051209"},{"annotations":[104720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061454"}]},"cv_name":"biological_process","definition":"The process in which calcium ions sequestered in the endoplasmic reticulum, Golgi apparatus or mitochondria are released into the cytosolic compartment.","definition_xrefs":["GOC:mtg_lung","PMID:1814929","GOC:dph","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sequestering of calcium ion","termid":"GO:0051283"},{"relation_name":"is_a","term_name":"calcium ion transmembrane import into cytosol","termid":"GO:0097553"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00321":null,"SJAG_03850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"release of sequestered calcium ion into cytosol","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"calcium ion (Ca2+) mobilization","type":"broad"},{"name":"calcium mobilization","type":"broad"},{"name":"cytoplasmic release of sequestered calcium ion (Ca2+)","type":"broad"},{"name":"cytoplasmic release of stored calcium ion (Ca2+)","type":"broad"},{"name":"cytosolic release of sequestered calcium ion (Ca2+)","type":"exact"},{"name":"cytosolic release of stored calcium ion (Ca2+)","type":"exact"},{"name":"release of sequestered calcium ion (Ca2+)","type":"broad"},{"name":"release of sequestered calcium ion into cytoplasm","type":"broad"},{"name":"release of stored calcium ion (Ca2+)","type":"broad"},{"name":"release of stored calcium ion (Ca2+) into cytoplasm","type":"broad"},{"name":"release of stored calcium ion (Ca2+) into cytosol","type":"exact"}],"termid":"GO:0051209","terms_by_termid":{"GO:0051209":null,"GO:0061454":null}}


id: PBO:0005385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific UPF0300 family protein 5","termid":"PBO:0005385"}


id: PBO:0069636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 913, pseudogene","termid":"PBO:0069636"}


id: PR:Q9HDV4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lysine-specific demethylase 5A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lid2 complex component lid2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP19A11.06","secondary_identifiers":["UniProtKB:Q9HDV4"],"synonyms":[{"name":"Lid2C component lid2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBP19A11.06","type":"related"},{"name":"Spom972h-KDM5A","type":"exact"}],"termid":"PR:Q9HDV4"}


id: PBO:0016118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced P-specific polypeptide Pc","termid":"PBO:0016118"}


id: PR:P26306
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell cycle checkpoint control protein RAD9B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00700","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rad9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.07c","secondary_identifiers":["UniProtKB:P26306"],"synonyms":[{"name":"Spom972h-RAD9B","type":"exact"}],"termid":"PR:P26306"}


id: PBO:0029078
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-third_meiotic_division","termid":"PBO:0029078"}


id: MOD:01438
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-[2-(pyridin-2-yl)ethyl]-L-cysteine.","definition_xrefs":["PubMed:18369855","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-pyridylethyl-L-cysteine","termid":"MOD:00424"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-[2-(pyridin-2-yl)ethyl]-L-cysteine","synonyms":[{"name":"2-PEC","type":"exact"},{"name":"2-vinylpyridine derivatized cysteine residue","type":"exact"},{"name":"Pyridylethyl","type":"related"},{"name":"Pyridylethyl Cystenyl","type":"exact"},{"name":"S-(pyridin-2-ylethyl)-L-cysteine","type":"exact"},{"name":"S-pyridylethylation","type":"related"}],"termid":"MOD:01438"}


id: PBO:0029728
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_1,3-beta-D-glucan_synthase_activity_during_growth_on_aculeacin_A","termid":"PBO:0029728"}


id: PBO:0085531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S29 and bacterial S14; RPS29B has a paralog, RPS29A, that arose from the whole genome duplication","termid":"PBO:0085531"}


id: GO:1900182
data:
  {"annotated_genes":["SJAG_03048","SJAG_03453","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98447,86906,90430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to nucleus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to nucleus","termid":"GO:1900180"},{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"positively_regulates","term_name":"protein localization to nucleus","termid":"GO:0034504"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_03048":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to nucleus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of protein localisation to nucleus","type":"narrow"},{"name":"activation of protein localization in cell nucleus","type":"narrow"},{"name":"activation of protein localization in nucleus","type":"exact"},{"name":"activation of protein localization to nucleus","type":"narrow"},{"name":"positive regulation of protein localisation to nucleus","type":"exact"},{"name":"positive regulation of protein localization in cell nucleus","type":"exact"},{"name":"positive regulation of protein localization in nucleus","type":"exact"},{"name":"up regulation of protein localisation to nucleus","type":"exact"},{"name":"up regulation of protein localization in cell nucleus","type":"exact"},{"name":"up regulation of protein localization in nucleus","type":"exact"},{"name":"up regulation of protein localization to nucleus","type":"exact"},{"name":"up-regulation of protein localisation to nucleus","type":"exact"},{"name":"up-regulation of protein localization in cell nucleus","type":"exact"},{"name":"up-regulation of protein localization in nucleus","type":"exact"},{"name":"up-regulation of protein localization to nucleus","type":"exact"},{"name":"upregulation of protein localisation to nucleus","type":"exact"},{"name":"upregulation of protein localization in cell nucleus","type":"exact"},{"name":"upregulation of protein localization in nucleus","type":"exact"},{"name":"upregulation of protein localization to nucleus","type":"exact"}],"termid":"GO:1900182","terms_by_termid":{"GO:0042307":null}}


id: GO:0009508
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A circular DNA molecule containing plastid encoded genes.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome","termid":"GO:0005694"},{"relation_name":"part_of","term_name":"plastid nucleoid","termid":"GO:0042646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005737","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"plastid chromosome","termid":"GO:0009508"}


id: GO:1990034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of calcium ions from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["GOC:mah","PMID:2145281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion transmembrane transport","termid":"GO:0070588"},{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"calcium ion export across plasma membrane","synonyms":[{"name":"calcium ion efflux from cell","type":"exact"},{"name":"calcium ion export from cell","type":"exact"}],"termid":"GO:1990034"}


id: PR:000037030
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the rho3 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein rho3 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC23C4.08","synonyms":[{"name":"Spom-rho3","type":"exact"}],"termid":"PR:000037030"}


id: GO:0018837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxy-2 H-benzo[h]chromene-2-carboxylate = cis -4-(1'-hydroxynaphth-2'-yl)-2-oxobut-3-enoate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxy-2H-benzo[h]chromene-2-carboxylate isomerase activity (obsolete GO:0018837)","termid":"GO:0018837"}


id: PBO:0056136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper and CTNNBIP1 domain containing","termid":"PBO:0056136"}


id: PBO:0088572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, ATP:ADP antiporter","termid":"PBO:0088572"}


id: PR:O94520
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- emc4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1281.03c","synonyms":[{"name":"Spom972h-emc4","type":"exact"}],"termid":"PR:O94520"}


id: GO:0015152
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of glucose-6-phosphate from one side of a membrane to the other. Glucose-6-phosphate is a monophosphorylated derivative of glucose with the phosphate group attached to C-6.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"hexose phosphate transmembrane transporter activity","termid":"GO:0015119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"glucose-6-phosphate transmembrane transporter activity","termid":"GO:0015152"}


id: GO:0098865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or temporarily subverts the tight cell-cell junctions between cells of the host. Tight cell-cell junctions, a cell-cell junction that seals cells together in an epithelium in a way that prevents even small molecules from leaking from one side of the sheet to the other.","definition_xrefs":["PMID:24287273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cell-cell junction","termid":"GO:0044067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host tight cell-cell junction","synonyms":[{"name":"disruption by symbiont of host tight cell-cell junction","type":"exact"},{"name":"disruption of host tight cell-cell junction","type":"broad"},{"name":"modification by symbiont of host bicellular tight junctions","type":"related"},{"name":"symbiont-mediated disruption of host tight cell-cell junction","type":"related"}],"termid":"GO:0098865"}


id: PR:Q9P376
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA polymerase II subunit A C-terminal domain phosphatase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23081:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit A C-terminal domain phosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19B12.05c","secondary_identifiers":["UniProtKB:Q9P376"],"synonyms":[{"name":"CTD phosphatase fcp1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC19B12.05c","type":"related"},{"name":"Spom972h-CTDP1","type":"exact"}],"termid":"PR:Q9P376"}


id: PBO:0062154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily G member 4 pseudogene","termid":"PBO:0062154"}


id: PBO:0090697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major poly(A) binding protein Pabp/Pab1","termid":"PBO:0090697"}


id: PBO:0029866
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_spores,_undivided_germinated_spores_and_divided_germinated_spores_(obsolete_FYPO:0002371)","termid":"PBO:0029866"}


id: PR:O74523
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC70.02c gene.","definition_xrefs":["UniProtKB:O74523","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase inhibitor, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC70.02c","synonyms":[{"name":"Spom972h-SPCC70.02c","type":"exact"}],"termid":"PR:O74523"}


id: PATO:0000183
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000183 limb tone (obsolete PATO:0000183)","termid":"PATO:0000183"}


id: GO:0072682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of an eosinophil from the blood vessels into the surrounding tissue.","definition_xrefs":["GOC:mah","GOC:BHF","CL:0000771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular extravasation","termid":"GO:0045123"},{"relation_name":"is_a","term_name":"eosinophil migration","termid":"GO:0072677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eosinophil extravasation","termid":"GO:0072682"}


id: PBO:0082734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Rpd3L histone deacetylase complex; required for diauxic shift-induced histone H2B deposition onto rDNA genes; transcriptional modulator involved in regulation of structural phospholipid biosynthesis genes and metabolically unrelated genes, as well as maintenance of telomeres, mating efficiency, and sporulation","termid":"PBO:0082734"}


id: GO:0000904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The change in form (cell shape and size) that occurs when relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cell morphogenesis involved in differentiation (obsolete GO:0000904)","termid":"GO:0000904"}


id: GO:0071642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of macrophage inflammatory protein 1 alpha.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"is_a","term_name":"regulation of macrophage inflammatory protein 1 alpha production","termid":"GO:0071640"},{"relation_name":"positively_regulates","term_name":"macrophage inflammatory protein-1 alpha production","termid":"GO:0071608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage inflammatory protein 1 alpha production","synonyms":[{"name":"positive regulation of CCL3 production","type":"exact"},{"name":"positive regulation of MIP-1a production","type":"exact"},{"name":"positive regulation of chemokine (C-C motif) ligand 3 production","type":"exact"},{"name":"positive regulation of macrophage inflammatory protein production","type":"broad"}],"termid":"GO:0071642"}


id: PBO:0078044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 34","termid":"PBO:0078044"}


id: PBO:0000426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA Z5","termid":"PBO:0000426"}


id: FYPO:0002200
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable and has one or more septa, and the cell diameter is larger than normal and the cell length is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable stubby vegetative cell","termid":"FYPO:0002107"},{"relation_name":"is_a","term_name":"inviable septated vegetative cell with abnormal cell morphology","termid":"FYPO:0002452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"inviable stubby septated vegetative cell","synonyms":[{"name":"inviable stubby septated cell during vegetative growth","type":"exact"},{"name":"inviable stubby septated vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable watermelon-shaped septated vegetative cell","type":"exact"},{"name":"lethal; stubby septated vegetative cell","type":"exact"},{"name":"stubby septated inviable vegetative cell","type":"exact"}],"termid":"FYPO:0002200"}


id: GO:0036204
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: abieta-7,13-dien-18-ol + NADPH + H+ + O2 = abieta-7,13-dien-18-al + NADP+ + 2 H2O. This is a two step reaction. The first step is: abieta-7,13-dien-18-ol + NADPH + H+ + O2 = abieta-7,13-dien-18,18-diol + + NADP+ + H2O. The second step is a spontaneous reaction: abieta-7,13-dien-18,18-diol = abieta-7,13-dien-18-al + H2O.","definition_xrefs":["EC:1.14.14.145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"abieta-7,13-dien-18-ol hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-12799","RHEA:26221","KEGG_REACTION:R06354"],"termid":"GO:0036204"}


id: FYPO:0001427
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which negative regulation of the initiation of mitotic DNA replication is abnormal, resulting in a single round of rereplication of the entire genome, which takes place more slowly than normal replication.","definition_xrefs":["PomBase:mah","PMID:10388806"],"direct_ancestors":[{"relation_name":"has_output","term_name":"DNA content increased during vegetative growth","termid":"FYPO:0000158"},{"relation_name":"is_a","term_name":"abnormal negative regulation of mitotic DNA replication initiation","termid":"FYPO:0000216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in slow rereplication","synonyms":[{"name":"abnormal negative regulation of DNA replication initiation during vegetative growth, resulting in slow rereplication","type":"exact"},{"name":"abnormal negative regulation of DNA replication initiation resulting in slow rereplication during mitotic cell cycle","type":"related"},{"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in slow re-replication","type":"exact"},{"name":"slow mitotic DNA re-replication","type":"related"},{"name":"slow mitotic DNA rereplication","type":"related"}],"termid":"FYPO:0001427"}


