# terms

id: GO:0021608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the accessory nerve. This process pertains to the initial formation of a structure from unspecified parts. The spinal branch of this motor nerve innervates the trapezius and the sternocleidomastoid muscles. The cranial branch joins the vagus nerve and innervates the same targets as the vagus nerve.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"accessory nerve morphogenesis","termid":"GO:0021607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"accessory nerve formation","synonyms":[{"name":"CN XI biosynthesis","type":"related"},{"name":"CN XI formation","type":"related"}],"termid":"GO:0021608"}


id: PBO:0002018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-methyltransferase (predicted)","termid":"PBO:0002018"}


id: PBO:0000066
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomeric duplication","termid":"PBO:0000066"}


id: GO:0170021
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when a soluble compound has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["PMID:36828965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"taste receptor activity","termid":"GO:0008527"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic ion channel activity","termid":"GO:0015276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0038023","GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ionotropic taste receptor activity","termid":"GO:0170021"}


id: PBO:0072338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 24","termid":"PBO:0072338"}


id: GO:0030586
data:
  {"annotated_genes":["SJAG_04459","SJAG_04042"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86092,98793],"is_not":false,"summary":null,"term":"GO:0030586"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: [methionine synthase]-cob(II)alamin + NADPH + H+ + S-adenosyl methionine = [methionine synthase]-methylcob(I)alamin + S-adenosylhomocysteine + NADP+.","definition_xrefs":["RHEA:23908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on metal ions, NAD or NADP as acceptor","termid":"GO:0016723"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04042":null,"SJAG_04459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"[methionine synthase] reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:2.1.1.135-RXN","Reactome:R-HSA-3149518","EC:1.16.1.8"],"synonyms":[{"name":"5-methyltetrahydrofolate-homocysteine methyltransferase reductase","type":"related"},{"name":"[methionine synthase]-cobalamin methyltransferase (cob(II)alamin reducing) activity","type":"exact"},{"name":"methionine synthase cob(II)alamin reductase (methylating) activity","type":"related"},{"name":"methionine synthase reductase activity","type":"related"},{"name":"methionine synthase-cobalamin methyltransferase (cob(II)alamin reducing)","type":"related"},{"name":"methionine synthase-methylcob(I)alamin,S-adenosylhomocysteine:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0030586","terms_by_termid":{"GO:0030586":null}}


id: PBO:0056875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MHC class I polypeptide-related sequence E (pseudogene)","termid":"PBO:0056875"}


id: PR:O60188
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- utp6 gene.","definition_xrefs":["UniProtKB:O60188","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC244.02c","synonyms":[{"name":"Spom972h-utp6","type":"exact"},{"name":"U3 snoRNA-associated protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60188"}


id: PBO:0005163
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRE1-like","termid":"PBO:0005163"}


id: PBO:0056245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrophage interferon regulatory lncRNA","termid":"PBO:0056245"}


id: PBO:0005170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 reductase (predicted)","termid":"PBO:0005170"}


id: PBO:0091873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pho84 repressing sense RNA Prt2","termid":"PBO:0091873"}


id: PBO:0056727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesoderm development LRP chaperone","termid":"PBO:0056727"}


id: PBO:0067362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 461, pseudogene","termid":"PBO:0067362"}


id: PBO:0113339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; regulates actin cable stability and branched-chain amino acid (BCAA) metabolism; involved in mitochondrial quality control and longevity; proposed to be involved in resistance to streptozotocin and camptothecin; localizes to punctate cytosolic structures","termid":"PBO:0113339"}


id: PBO:0042453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 pseudogene 6","termid":"PBO:0042453"}


id: GO:0002266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in the morphology or behavior of a follicular dendritic cell resulting from exposure to an activating factor such as a cellular or soluble ligand.","definition_xrefs":["GOC:add","PMID:15606789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation","termid":"GO:0001775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"follicular dendritic cell activation","termid":"GO:0002266"}


id: FYPO:0000425
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of endocytosis is increased. A phenotype may affect endocytosis of all cargoes, or of specific cargo such as a particular protein.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endocytosis during vegetative growth","termid":"FYPO:0000034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"increased endocytosis during vegetative growth","synonyms":[{"name":"endocytosis: increased during vegetative growth","type":"related"},{"name":"increased actin-mediated endocytosis during vegetative growth","type":"exact"},{"name":"increased endocytosis during mitotic cell cycle","type":"related"},{"name":"increased protein internalization during vegetative growth","type":"narrow"}],"termid":"FYPO:0000425"}


id: GO:0000936
data:
  {"annotated_genes":["SJAG_00667","SJAG_05285"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96205,111883],"is_not":false,"summary":null,"term":"GO:0000936"}]},"cv_name":"cellular_component","definition":"A cell septum that forms following nuclear division.","definition_xrefs":["ISBN:0471940526","GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"division septum","termid":"GO:0000935"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000935"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0000935"],"is_obsolete":false,"name":"primary cell septum","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"primary septum","type":"broad"}],"termid":"GO:0000936","terms_by_termid":{"GO:0000936":null}}


id: GO:0043763
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of UTP:glucose-1-phosphate uridylyltransferase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"UTP:glucose-1-phosphate uridylyltransferase regulator activity","synonyms":[{"name":"UDP-glucose diphosphorylase regulator activity","type":"exact"},{"name":"UDP-glucose pyrophosphorylase regulator activity","type":"exact"},{"name":"glucose-1-phosphate uridylyltransferase regulator activity","type":"exact"}],"termid":"GO:0043763"}


id: PR:O13983
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hrq1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent helicase hrq1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23A1.19c","synonyms":[{"name":"Spom972h-hrq1","type":"exact"},{"name":"homologous to recQ protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13983"}


id: PBO:0049326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIB","termid":"PBO:0049326"}


id: PBO:0064117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin 1, transient receptor potential channel interacting pseudogene 4","termid":"PBO:0064117"}


id: PBO:0046357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 15","termid":"PBO:0046357"}


id: FYPO:0004956
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial RNA 3'-end processing is abnormal.","definition_xrefs":["PMID:18304578","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0000294"],"is_obsolete":false,"name":"abnormal mitochondrial RNA 3'-end processing","synonyms":[{"name":"abnormal mitochondrial RNA 3' end processing","type":"exact"},{"name":"abnormal mitochondrial RNA 3'-end processing during mitotic cell cycle","type":"related"},{"name":"abnormal mitochondrial RNA 3'-end processing during vegetative growth","type":"exact"}],"termid":"FYPO:0004956"}


id: PBO:0003839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-isopropylmalate dehydrogenase Leu1","termid":"PBO:0003839"}


id: PBO:0091986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf meiotic drive antidote Wtf23","termid":"PBO:0091986"}


id: PBO:0067839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 141","termid":"PBO:0067839"}


id: PBO:0036343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAK-related GC kinase Ppk11","termid":"PBO:0036343"}


id: PBO:0060520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NARF antisense RNA 2","termid":"PBO:0060520"}


id: PBO:0003646
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDG-Ii","termid":"PBO:0003646"}


id: PBO:0047067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 131 member B","termid":"PBO:0047067"}


id: GO:0043542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of an endothelial cell into the extracellular matrix to form an endothelium.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration","termid":"GO:0010631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial cell migration","termid":"GO:0043542"}


id: GO:0035874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of copper ions.","definition_xrefs":["GOC:vw","PMID:16467469"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"},{"relation_name":"is_a","term_name":"response to copper ion starvation","termid":"GO:0120126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to copper ion starvation","synonyms":[{"name":"cellular response to copper starvation","type":"exact"}],"termid":"GO:0035874"}


id: PBO:0053651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 703","termid":"PBO:0053651"}


id: PBO:0073196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selectin P","termid":"PBO:0073196"}


id: PBO:0017008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR42","termid":"PBO:0017008"}


id: PBO:0074320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD9 intronic transcript 1","termid":"PBO:0074320"}


id: FYPO:0003140
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues in one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased protein tyrosine phosphorylation during cellular response to heat (obsolete FYPO:0003140)","synonyms":[{"name":"decreased peptidyl-tyrosine phosphorylation during cellular response to heat","type":"exact"},{"name":"decreased protein tyrosine phosphorylation during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"decreased protein tyrosine phosphorylation during cellular response to heat during vegetative growth","type":"exact"},{"name":"decreased tyrosine phosphorylation during cellular response to heat","type":"exact"},{"name":"reduced protein tyrosine phosphorylation during cellular response to heat","type":"exact"}],"termid":"FYPO:0003140"}


id: GO:0015956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a bis(5'-nucleosidyl) oligophosphate, a compound formed of two nucleosides joined together through their 5' carbons by a chain of phosphate molecules.","definition_xrefs":["GOC:mah","PMID:10970777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"bis(5'-nucleosidyl) oligophosphate metabolic process","synonyms":[{"name":"bis(5'-nucleosidyl) oligophosphate metabolism","type":"exact"}],"termid":"GO:0015956"}


id: PBO:0045950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGF like domain multiple 6","termid":"PBO:0045950"}


id: GO:0008058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of intracellular pigment storage granules in the ocellus.","direct_ancestors":[{"relation_name":"is_a","term_name":"pigment granule organization","termid":"GO:0048753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ocellus pigment granule organization","synonyms":[{"name":"ocellus pigment granule organisation","type":"exact"},{"name":"ocellus pigment granule organization and biogenesis","type":"related"}],"termid":"GO:0008058"}


id: PBO:0052920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 19-3","termid":"PBO:0052920"}


id: GO:0043013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or prevents the binding and fusion of a sperm to the oocyte plasma membrane.","definition_xrefs":["PMID:34459848","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fusion of sperm to egg plasma membrane","termid":"GO:0043012"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"fusion of sperm to egg plasma membrane involved in single fertilization","termid":"GO:0007342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"negative regulation of fusion of sperm to egg plasma membrane","synonyms":[{"name":"down regulation of fusion of sperm to egg plasma membrane","type":"exact"},{"name":"down-regulation of fusion of sperm to egg plasma membrane","type":"exact"},{"name":"downregulation of fusion of sperm to egg plasma membrane","type":"exact"},{"name":"inhibition of fusion of sperm to egg plasma membrane","type":"narrow"},{"name":"inhibition of sperm-oocyte fusion","type":"narrow"},{"name":"negative regulation of sperm-oocyte fusion","type":"narrow"}],"termid":"GO:0043013"}


id: PBO:0072843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor APC domain containing 1","termid":"PBO:0072843"}


id: PBO:0062337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 76","termid":"PBO:0062337"}


id: GO:0070715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, sodium-dependent, movement of organic cations into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"sodium-dependent organic cation transport","termid":"GO:0070715"}


id: GO:0044728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of adding or removing a methyl group from one or more nucleotides within an DNA molecule.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA methylation or demethylation (obsolete GO:0044728)","synonyms":[{"name":"changes in DNA methylation","type":"related"}],"termid":"GO:0044728"}


id: PBO:0081453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 320","termid":"PBO:0081453"}


id: PBO:0036219
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_prospore_membrane_formation","termid":"PBO:0036219"}


id: GO:0034669
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alpha4 subunit and one beta7 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"integrin alpha4-beta7 complex","synonyms":[{"name":"ITGA4-ITGB7 complex","type":"narrow"},{"name":"alpha4-beta7 integrin complex","type":"exact"}],"termid":"GO:0034669"}


id: PR:Q10474
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lys7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.02c","synonyms":[{"name":"AASD-PPT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lys7","type":"exact"}],"termid":"PR:Q10474"}


id: PBO:0078225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 11-3","termid":"PBO:0078225"}


id: GO:0010125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mycothiol, which consists of N-acetyl-L-cysteine linked to a pseudodisaccharide, D-glucosamine and myo-inositol. Mycothiol is produced in actinomycetes like mycobacteria and serves similar functions to glutathione.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mycothiol metabolic process","termid":"GO:0010126"},{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"mycothiol biosynthetic process","secondary_identifiers":["MetaCyc:PWY1G-0"],"synonyms":[{"name":"mycothiol anabolism","type":"exact"},{"name":"mycothiol biosynthesis","type":"exact"},{"name":"mycothiol formation","type":"exact"},{"name":"mycothiol synthesis","type":"exact"}],"termid":"GO:0010125"}


id: PBO:0068210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 517","termid":"PBO:0068210"}


id: PR:Q9Y8G3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nuclear RNA export factor 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA export factor mex67 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1921.03c","secondary_identifiers":["UniProtKB:Q9Y8G3"],"synonyms":[{"name":"SPBC1921.03c","type":"related"},{"name":"Spom972h-NXF1","type":"exact"}],"termid":"PR:Q9Y8G3"}


id: PBO:0004271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar sorting protein Vps33","termid":"PBO:0004271"}


id: PBO:0091673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane glycerophosphodiester transmembrane transporter","termid":"PBO:0091673"}


id: PATO:0002343
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's lying or growing on the ground but with erect or rising tips.","definition_xrefs":["thefreedictionary:www.thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostrate","termid":"PATO:0000631"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decumbent","termid":"PATO:0002343"}


id: PBO:0000243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium ion transporter Trk2","termid":"PBO:0000243"}


id: PBO:0005226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human leukocyte receptor 1 ortholog","termid":"PBO:0005226"}


id: PBO:0000391
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homodimer","termid":"PBO:0000391"}


id: GO:0060924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to atrial cardiac muscle cell fates and their capacity to differentiate into cardiac muscle cells of the atrium. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell fate commitment","termid":"GO:0060923"},{"relation_name":"part_of","term_name":"atrial cardiac muscle cell differentiation","termid":"GO:0055011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial cardiac muscle cell fate commitment","synonyms":[{"name":"atrial cardiomyocyte cell fate commitment","type":"related"},{"name":"atrial heart muscle cell fate commitment","type":"exact"}],"termid":"GO:0060924"}


id: PBO:0087656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the HIR complex; HIR is a nucleosome assembly complex involved in regulation of histone gene transcription; contributes to nucleosome formation, heterochromatic gene silencing, and formation of functional kinetochores","termid":"PBO:0087656"}


id: PBO:0091267
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc25 can modulate the probability of entering mitosis at a given cell size","termid":"PBO:0091267"}


id: PBO:0088797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-diphospho-oligosaccharide-protein glycosyltransferase Ost1","termid":"PBO:0088797"}


id: PBO:0030756
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_glutamate_dehydrogenase_(NAD+)_activity","termid":"PBO:0030756"}


id: PBO:0029833
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_endomembrane_system","termid":"PBO:0029833"}


id: GO:0090426
data:
  {"annotated_genes":["SJAG_04498","SJAG_02864","SJAG_04621","SJAG_00938"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94352,85394,94092,104189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071520"}]},"cv_name":"biological_process","definition":"A process of actin filament bundle distribution that results in the compaction of actin filaments.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle distribution","termid":"GO:0070650"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_02864":null,"SJAG_04498":null,"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"actin filament bundle convergence","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090426","terms_by_termid":{"GO:0071520":null}}


id: GO:0051524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell switches from bipolar cell growth to monopolar cell growth.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of monopolar cell polarity","termid":"GO:0061162"},{"relation_name":"is_a","term_name":"regulation of direction of cell growth","termid":"GO:0061389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"cell growth mode switching, bipolar to monopolar","termid":"GO:0051524"}


id: PBO:0084306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Iron transporter, mediates Fe2+ transport across inner mito membrane; mitochondrial carrier family member; active under low-iron conditions; may transport other cations; MRS3 has a paralog, MRS4, that arose from the whole genome duplication","termid":"PBO:0084306"}


id: PBO:0080884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yrdC N6-threonylcarbamoyltransferase domain containing","termid":"PBO:0080884"}


id: PBO:0061626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 9 pseudogene 1","termid":"PBO:0061626"}


id: PBO:0049151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione peroxidase 8 (putative)","termid":"PBO:0049151"}


id: PBO:0043921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary rootlet coiled-coil, rootletin family member 2","termid":"PBO:0043921"}


id: GO:0021845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The response of migrating interneurons to neurotransmitters that alter electrical activity in cells in calcium dependent manner.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:cls","GOC:dgh","PMID:12626695","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"part_of","term_name":"substrate-independent telencephalic tangential interneuron migration","termid":"GO:0021843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neurotransmitter-mediated guidance of interneurons involved in substrate-independent cerebral cortex tangential migration","termid":"GO:0021845"}


id: GO:0047753
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: choline sulfate + H2O = choline + H+ + sulfate.","definition_xrefs":["EC:3.1.6.6","RHEA:20820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"choline-sulfatase activity","secondary_identifiers":["KEGG_REACTION:R01028","MetaCyc:CHOLINE-SULFATASE-RXN"],"synonyms":[{"name":"choline-sulfate sulfohydrolase activity","type":"related"},{"name":"choline-sulphatase activity","type":"exact"}],"termid":"GO:0047753"}


id: GO:1901208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of heart looping.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart looping","termid":"GO:1901207"},{"relation_name":"is_a","term_name":"negative regulation of morphogenesis of an epithelium","termid":"GO:1905331"},{"relation_name":"negatively_regulates","term_name":"heart looping","termid":"GO:0001947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of heart looping","synonyms":[{"name":"down regulation of cardiac looping","type":"exact"},{"name":"down regulation of heart looping","type":"exact"},{"name":"down-regulation of cardiac looping","type":"exact"},{"name":"down-regulation of heart looping","type":"exact"},{"name":"downregulation of cardiac looping","type":"exact"},{"name":"downregulation of heart looping","type":"exact"},{"name":"inhibition of cardiac looping","type":"exact"},{"name":"inhibition of heart looping","type":"narrow"},{"name":"negative regulation of cardiac looping","type":"exact"}],"termid":"GO:1901208"}


id: PR:O59779
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1235.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1235.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.01","synonyms":[{"name":"Spom972h-SPCC1235.01","type":"exact"}],"termid":"PR:O59779"}


id: PBO:0043317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clathrin interactor 1","termid":"PBO:0043317"}


id: FYPO:0002375
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues in one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased protein tyrosine phosphorylation during vegetative growth (obsolete FYPO:0002375)","synonyms":[{"name":"decreased peptidyl-tyrosine phosphorylation during vegetative growth","type":"exact"},{"name":"decreased protein tyrosine phosphorylation during mitotic cell cycle","type":"related"},{"name":"decreased tyrosine phosphorylation during vegetative growth","type":"exact"},{"name":"reduced protein tyrosine phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002375"}


id: GO:0019669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of glycine, yielding energy in the form of ATP.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycine catabolic process","termid":"GO:0006546"},{"relation_name":"is_a","term_name":"anaerobic amino acid catabolic process","termid":"GO:0019665"},{"relation_name":"is_a","term_name":"nitrogenous compound fermentation","termid":"GO:0019666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150","GO:0044248","GO:0006091"],"is_obsolete":false,"name":"anaerobic glycine catabolic process","synonyms":[{"name":"glycine fermentation","type":"exact"}],"termid":"GO:0019669"}


id: PBO:0078176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 2-1","termid":"PBO:0078176"}


id: PBO:0061837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OGFR antisense RNA 1","termid":"PBO:0061837"}


id: GO:0070799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of conidiophore stalk development, a process that leads to the formation of a conidiophore stalk. The conidiophore stalk is part of a specialized hypha that extends aerially from the growth substrate and supports structures from which conidia, or asexual spores, develop.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"conidiophore stalk development","termid":"GO:0070788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of conidiophore stalk development","termid":"GO:0070799"}


id: PBO:0043318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAP-Gly domain containing linker protein 1","termid":"PBO:0043318"}


id: PBO:0030616
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cilofungin","termid":"PBO:0030616"}


id: PBO:0055556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2992","termid":"PBO:0055556"}


id: PBO:0076833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomeric repeat binding factor 1","termid":"PBO:0076833"}


id: PR:O13679
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC737.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C737.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC737.05","synonyms":[{"name":"Spom972h-SPCC737.05","type":"exact"}],"termid":"PR:O13679"}


id: PBO:0082012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger SWIM-type containing 9","termid":"PBO:0082012"}


id: PBO:0057508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 626","termid":"PBO:0057508"}


id: FYPO:0000567
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of septum assembly is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum assembly","termid":"FYPO:0000117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0000032","FYPO:0001320"],"is_obsolete":false,"name":"decreased duration of septum assembly","synonyms":[{"name":"decreased division septum formation involved in mitotic cytokinesis","type":"related"},{"name":"decreased duration of division septum assembly","type":"exact"},{"name":"decreased duration of division septum formation involved in mitotic cytokinesis","type":"exact"},{"name":"decreased duration of septation","type":"broad"},{"name":"decreased duration of septum assembly during mitotic cell cycle","type":"related"},{"name":"decreased duration of septum assembly during vegetative growth","type":"exact"},{"name":"decreased septation","type":"related"},{"name":"decreased septum formation","type":"related"},{"name":"reduced duration of septum assembly","type":"exact"},{"name":"septum formation: decreased","type":"broad"}],"termid":"FYPO:0000567"}


id: GO:0050981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events by which an electrical stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:dos","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of abiotic stimulus","termid":"GO:0009582"},{"relation_name":"is_a","term_name":"response to electrical stimulus","termid":"GO:0051602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of electrical stimulus","termid":"GO:0050981"}


id: GO:0010253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of UDP-L-rhamnose, a substance composed of rhamnose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["PMID:15134748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"UDP-rhamnose metabolic process","termid":"GO:0033478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"UDP-rhamnose biosynthetic process","secondary_identifiers":["MetaCyc:PWY-3261"],"synonyms":[{"name":"UDP-rhamnose anabolism","type":"exact"},{"name":"UDP-rhamnose biosynthesis","type":"exact"},{"name":"UDP-rhamnose formation","type":"exact"},{"name":"UDP-rhamnose synthesis","type":"exact"}],"termid":"GO:0010253"}


id: PBO:0060826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nectin cell adhesion molecule 2","termid":"PBO:0060826"}


id: PBO:0050626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor 1","termid":"PBO:0050626"}


id: PBO:0083352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene IES1/YFL013C","termid":"PBO:0083352"}


id: PBO:0087383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sterol/phosphatidylinositol-4-phosphate (PI(4)P) exchanger; one of seven members of the yeast oxysterol binding protein family; involved in negative regulation of Sec14p-dependent Golgi complex secretory functions, peripheral membrane protein that localizes to the Golgi complex; KES1 has a paralog, HES1, that arose from the whole genome duplication","termid":"PBO:0087383"}


id: GO:0021982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the pineal gland over time from its initial formation until its mature state. The pineal gland is an endocrine gland that secretes melatonin and is involved in circadian rhythms.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:dgh","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"},{"relation_name":"part_of","term_name":"diencephalon development","termid":"GO:0021536"},{"relation_name":"part_of","term_name":"endocrine system development","termid":"GO:0035270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pineal gland development","synonyms":[{"name":"epiphysis development","type":"exact"}],"termid":"GO:0021982"}


id: PR:O14310
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- npp106 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin npp106 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.14","synonyms":[{"name":"Spom972h-npp106","type":"exact"},{"name":"nuclear pore protein npp106 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14310"}


id: GO:0021634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the optic nerve. This process pertains to the initial formation of a structure from unspecified parts. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain.","definition_xrefs":["GOC:cls","GOC:dgh","GO_REF:0000021","GOC:jid","ISBN:0838580343","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"optic nerve morphogenesis","termid":"GO:0021631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optic nerve formation","synonyms":[{"name":"CN II biosynthesis","type":"related"},{"name":"CN II formation","type":"related"}],"termid":"GO:0021634"}


id: GO:1905421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of plant organ morphogenesis.","definition_xrefs":["GOC:tb","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"plant organ morphogenesis","termid":"GO:1905392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of plant organ morphogenesis","termid":"GO:1905421"}


id: GO:0000421
data:
  {"annotated_genes":["SJAG_06309","SJAG_02414"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86139,109702],"is_not":false,"summary":null,"term":"GO:0000421"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding an autophagosome, a double-membrane-bounded vesicle in which endogenous cellular material is sequestered.","definition_xrefs":["GOC:autophagy","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar membrane","termid":"GO:0005774"},{"relation_name":"part_of","term_name":"autophagosome","termid":"GO:0005776"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02414":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005773","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"autophagosome membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"autophagic vacuole membrane","type":"exact"}],"termid":"GO:0000421","terms_by_termid":{"GO:0000421":null}}


id: GO:0010846
data:
  {"annotated_genes":["SJAG_00266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104020],"is_not":false,"summary":null,"term":"GO:0010846"}]},"cv_name":"biological_process","definition":"Any process that starts the inactive process of reciprocal meiotic recombination. Reciprocal meiotic recombination is the cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of reciprocal meiotic recombination","termid":"GO:0010845"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"positively_regulates","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0008150","GO:0140013","GO:0007049"],"is_obsolete":false,"name":"activation of reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of meiotic recombination","type":"related"}],"termid":"GO:0010846","terms_by_termid":{"GO:0010846":null}}


id: PBO:0072014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S8","termid":"PBO:0072014"}


id: PBO:0111841
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain","termid":"PBO:0111841"}


id: GO:0060383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of DNA strand elongation. DNA strand elongation is the DNA metabolic process in which an existing DNA strand is extended by activities including the addition of nucleotides to the 3' end of the strand.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA metabolic process","termid":"GO:0051054"},{"relation_name":"is_a","term_name":"regulation of DNA strand elongation","termid":"GO:0060382"},{"relation_name":"positively_regulates","term_name":"DNA strand elongation","termid":"GO:0022616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"positive regulation of DNA strand elongation","termid":"GO:0060383"}


id: PR:Q7Z9I1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pfl4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q7Z9I1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell agglutination protein C188.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC188.09c","synonyms":[{"name":"Spom972h-pfl4","type":"exact"}],"termid":"PR:Q7Z9I1"}


id: PBO:0002047
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N syndrome","termid":"PBO:0002047"}


id: GO:0021959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the dorsal root ganglion towards target cells in the medulla. This axonal process is a member of those that make up the cuneatus tract, a group of axons that are from neurons involved in proprioception from the upper trunk and upper limb.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dgh","GOC:jid","PMID:12867698","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cuneatus tract morphogenesis","synonyms":[{"name":"tract of Burdach morphogenesis","type":"exact"}],"termid":"GO:0021959"}


id: GO:0060229
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a lipase, an enzyme that catalyzes of the hydrolysis of a lipid.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140677","GO:0098772","GO:0030234"],"is_obsolete":false,"name":"lipase activator activity","termid":"GO:0060229"}


id: GO:0047909
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 mono-beta-D-galactosyldiacylglycerol = acylmono-beta-D-galactosyl-diacylglycerol + mono-beta-D-galactosylacylglycerol.","definition_xrefs":["EC:2.3.1.134","MetaCyc:GALACTOLIPID-O-ACYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"galactolipid O-acyltransferase activity","synonyms":[{"name":"galactolipid:galactolipid acyltransferase activity","type":"related"},{"name":"mono-beta-D-galactosyldiacylglycerol:mono-beta-D-galactosyldiacylglycerol acyltransferase activity","type":"related"}],"termid":"GO:0047909"}


id: FYPO:0003531
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which peroxisome size is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal peroxisome size","synonyms":[{"name":"normal peroxisome size during mitotic cell cycle","type":"related"},{"name":"normal peroxisome size during vegetative growth","type":"exact"}],"termid":"FYPO:0003531"}


id: GO:1905526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Golgi lumen acidification.","definition_xrefs":["GOC:TermGenie","GOC:dph","PMID:23447592","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular pH reduction","termid":"GO:0032847"},{"relation_name":"regulates","term_name":"Golgi lumen acidification","termid":"GO:0061795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of Golgi lumen acidification","termid":"GO:1905526"}


id: PR:Q9USL2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC18B5.09c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USL2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18B5.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18B5.09c","synonyms":[{"name":"Spom972h-SPCC18B5.09c","type":"exact"}],"termid":"PR:Q9USL2"}


id: FYPO:0000003
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01205:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01205","name":"crb2delta","uniquename":"SJAG_01205:allele-1"},"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_01410:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01410","name":"rad51delta","uniquename":"SJAG_01410:allele-1"},"SJAG_01605:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01605","name":"rad9delta","uniquename":"SJAG_01605:allele-1"},"SJAG_01680:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01680","name":"chk1delta","uniquename":"SJAG_01680:allele-1"},"SJAG_01753:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01753","name":"mdh1delta","uniquename":"SJAG_01753:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_01946:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01946","name":"cem1delta","uniquename":"SJAG_01946:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02409","name":"stc1delta","uniquename":"SJAG_02409:allele-1"},"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02594:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02594","name":"arb1delta","uniquename":"SJAG_02594:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_02668:allele-1":{"allele_type":"amino_acid_mutation","description":"R77W","gene_uniquename":"SJAG_02668","name":"mpe1-R77W","uniquename":"SJAG_02668:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"},"SJAG_02860:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02860","name":"wcs1delta","uniquename":"SJAG_02860:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03118:allele-2":{"allele_type":"nonsense_mutation","description":"aa61->stop","gene_uniquename":"SJAG_03118","name":"frameshift","uniquename":"SJAG_03118:allele-2"},"SJAG_03198:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03198","name":"oar2delta","uniquename":"SJAG_03198:allele-1"},"SJAG_03198:allele-2":{"allele_type":"amino_acid_mutation","description":"Y189D cold sensitive","gene_uniquename":"SJAG_03198","name":"oar2-51","uniquename":"SJAG_03198:allele-2"},"SJAG_03198:allele-3":{"allele_type":"amino_acid_mutation","description":"R72A,L75A,R106A,L109A","gene_uniquename":"SJAG_03198","name":"oar2-dm12","synonyms":[{"name":"destruction box mutations","reference":"PMID:23786411","type":"exact"}],"uniquename":"SJAG_03198:allele-3"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03356:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03356","name":"rdp1delta","uniquename":"SJAG_03356:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"},"SJAG_03720:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03720","name":"tel1delta","uniquename":"SJAG_03720:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_03916:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03916","name":"chp1delta","uniquename":"SJAG_03916:allele-1"},"SJAG_03920:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03920","name":"sdh3delta","uniquename":"SJAG_03920:allele-1"},"SJAG_04061:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04061","name":"arb2delta","uniquename":"SJAG_04061:allele-1"},"SJAG_04287:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04287","name":"cds1delta","uniquename":"SJAG_04287:allele-1"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-3":{"allele_type":"other","description":"Pmk1 from S. pombe","gene_uniquename":"SJAG_04551","name":"Pmk1Sp","uniquename":"SJAG_04551:allele-3"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"},"SJAG_04574:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04574","name":"clr4delta","uniquename":"SJAG_04574:allele-1"},"SJAG_04671:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04671","name":"mrc1delta","uniquename":"SJAG_04671:allele-1"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"},"SJAG_04843:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04843","name":"fum1delta","uniquename":"SJAG_04843:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"},"SJAG_05242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05242","name":"wcs2delta","uniquename":"SJAG_05242:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002061"},{"annotations":[115372,115374,115376,115373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000674"},{"annotations":[115272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000085"},{"annotations":[115269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000088"},{"annotations":[115652,115655,115654,115653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002058"}],"single_locus_phenotype":[{"annotations":[115163,115175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004481"},{"annotations":[115416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003535"},{"annotations":[115425,115624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000082"},{"annotations":[115360,115361,115359,115375,115487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000080"},{"annotations":[115174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000708"},{"annotations":[115251,115252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0008046"},{"annotations":[115462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000584"},{"annotations":[115432,115323,115440,115436,115241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001355"},{"annotations":[115503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0009111"},{"annotations":[115500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000588"},{"annotations":[115640,115656,115646,115645,115641,115642,115643,115644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002061"},{"annotations":[115622,115365,115367,115366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001387"},{"annotations":[115506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005705"},{"annotations":[115618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000245"},{"annotations":[115504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005231"},{"annotations":[115282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001690"},{"annotations":[115314,115313,115571,115312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001357"},{"annotations":[115281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004693"},{"annotations":[115590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005152"},{"annotations":[115597,115582,115603,115611,115608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007521"},{"annotations":[115502,115620,115166,115178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000097"},{"annotations":[115561,115560,115277,115276,115278,115270,115271,115562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000085"},{"annotations":[115596,115581],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000079"},{"annotations":[115505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001408"},{"annotations":[115619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000087"},{"annotations":[115273,115274,115275,115268,115267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000088"},{"annotations":[115426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000106"},{"annotations":[115468,115421,115420,115469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000107"},{"annotations":[115488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000714"},{"annotations":[115177,115165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000726"},{"annotations":[115621],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001214"},{"annotations":[115164,115176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000271"},{"annotations":[115179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000841"},{"annotations":[115591],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007522"},{"annotations":[115555,115485,115311,115279,115554,115280,115296,115486,115338,115206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001234"},{"annotations":[115328,115329,115330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002058"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype that is observed at the level of a population of cells.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenotype","termid":"FYPO:0000001"}],"gene_count":53,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00364":null,"SJAG_00409":null,"SJAG_00426":null,"SJAG_00429":null,"SJAG_00514":null,"SJAG_00601":null,"SJAG_00610":null,"SJAG_01205":null,"SJAG_01242":null,"SJAG_01355":null,"SJAG_01410":null,"SJAG_01605":null,"SJAG_01680":null,"SJAG_01753":null,"SJAG_01787":null,"SJAG_01794":null,"SJAG_01946":null,"SJAG_01956":null,"SJAG_02392":null,"SJAG_02409":null,"SJAG_02527":null,"SJAG_02592":null,"SJAG_02594":null,"SJAG_02621":null,"SJAG_02668":null,"SJAG_02763":null,"SJAG_02819":null,"SJAG_02860":null,"SJAG_03118":null,"SJAG_03198":null,"SJAG_03351":null,"SJAG_03356":null,"SJAG_03449":null,"SJAG_03453":null,"SJAG_03575":null,"SJAG_03689":null,"SJAG_03720":null,"SJAG_03892":null,"SJAG_03916":null,"SJAG_03920":null,"SJAG_04061":null,"SJAG_04287":null,"SJAG_04312":null,"SJAG_04464":null,"SJAG_04551":null,"SJAG_04574":null,"SJAG_04671":null,"SJAG_04697":null,"SJAG_04703":null,"SJAG_04843":null,"SJAG_05207":null,"SJAG_05242":null},"genotype_count":66,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(Pmk1 from S. pombe)","display_uniquename":"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-3","expression":"Not assayed or wild type"}]}]},"ago1delta":{"display_name":"ago1delta","display_uniquename":"ago1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]}]},"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__cem1delta":{"display_name":"apc2-361(E548K ts) cem1delta","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__cem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01946:allele-1","expression":"Null"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts) oar2-51(Y189D cold sensitive)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-2","expression":"Not assayed or wild type"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression":{"display_name":"apc2-361(E548K ts) oar2-dm12(R72A,L75A,R106A,L109A aa)[Overexpression]","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-3","expression":"Overexpression"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2delta":{"display_name":"apc2-361(E548K ts) oar2delta","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-1","expression":"Null"}]}]},"arb1delta":{"display_name":"arb1delta","display_uniquename":"arb1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02594:allele-1","expression":"Null"}]}]},"arb2delta":{"display_name":"arb2delta","display_uniquename":"arb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04061:allele-1","expression":"Null"}]}]},"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]},"cds1delta":{"display_name":"cds1delta","display_uniquename":"cds1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04287:allele-1","expression":"Null"}]}]},"cem1delta":{"display_name":"cem1delta","display_uniquename":"cem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01946:allele-1","expression":"Null"}]}]},"chk1delta":{"display_name":"chk1delta","display_uniquename":"chk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01680:allele-1","expression":"Null"}]}]},"chk1delta__crb2delta":{"display_name":"chk1delta crb2delta","display_uniquename":"chk1delta__crb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01680:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01205:allele-1","expression":"Null"}]}]},"chp1delta":{"display_name":"chp1delta","display_uniquename":"chp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03916:allele-1","expression":"Null"}]}]},"clr4delta":{"display_name":"clr4delta","display_uniquename":"clr4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04574:allele-1","expression":"Null"}]}]},"clr4delta__leo1delta":{"display_name":"clr4delta leo1delta","display_uniquename":"clr4delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04574:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"crb2delta":{"display_name":"crb2delta","display_uniquename":"crb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01205:allele-1","expression":"Null"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__frameshift-aa61->stop-nonsense_mutation-expression-not_assayed_or_wild_type":{"display_name":"dcr1delta frameshift(aa61->stop)","display_uniquename":"dcr1delta__frameshift-aa61->stop-nonsense_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-2","expression":"Not assayed or wild type"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta__mpe1-R77W-R77W-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"dcr1delta mpe1-R77W(aa)","display_uniquename":"dcr1delta__mpe1-R77W-R77W-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02668:allele-1","expression":"Not assayed or wild type"}]}]},"efc25delta":{"display_name":"efc25delta","display_uniquename":"efc25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02819:allele-1","expression":"Null"}]}]},"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]},"fum1delta":{"display_name":"fum1delta","display_uniquename":"fum1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04843:allele-1","expression":"Null"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"gpd1delta":{"display_name":"gpd1delta","display_uniquename":"gpd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00409:allele-1","expression":"Null"}]}]},"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"mdh1delta":{"display_name":"mdh1delta","display_uniquename":"mdh1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01753:allele-1","expression":"Null"}]}]},"mrc1delta":{"display_name":"mrc1delta","display_uniquename":"mrc1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04671:allele-1","expression":"Null"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]},"oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression":{"display_name":"oar2-51(Y189D cold sensitive)[Overexpression]","display_uniquename":"oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-2","expression":"Overexpression"}]}]},"oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression":{"display_name":"oar2-dm12(R72A,L75A,R106A,L109A aa)[Overexpression]","display_uniquename":"oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-3","expression":"Overexpression"}]}]},"oar2delta":{"display_name":"oar2delta","display_uniquename":"oar2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-1","expression":"Null"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rad26delta":{"display_name":"rad26delta","display_uniquename":"rad26delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00429:allele-1","expression":"Null"}]}]},"rad3delta":{"display_name":"rad3delta","display_uniquename":"rad3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00364:allele-1","expression":"Null"}]}]},"rad51delta":{"display_name":"rad51delta","display_uniquename":"rad51delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01410:allele-1","expression":"Null"}]}]},"rad9delta":{"display_name":"rad9delta","display_uniquename":"rad9delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01605:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"rdp1delta":{"display_name":"rdp1delta","display_uniquename":"rdp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03356:allele-1","expression":"Null"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]},"sdh3delta":{"display_name":"sdh3delta","display_uniquename":"sdh3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03920:allele-1","expression":"Null"}]}]},"stc1delta":{"display_name":"stc1delta","display_uniquename":"stc1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02409:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"tel1delta":{"display_name":"tel1delta","display_uniquename":"tel1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03720:allele-1","expression":"Null"}]}]},"vps32delta":{"display_name":"vps32delta","display_uniquename":"vps32delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01242:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]},"wcs1delta":{"display_name":"wcs1delta","display_uniquename":"wcs1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02860:allele-1","expression":"Null"}]}]},"wcs2delta":{"display_name":"wcs2delta","display_uniquename":"wcs2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05242:allele-1","expression":"Null"}]}]}},"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03575","SJAG_01205","SJAG_03198","SJAG_03118","SJAG_01680","SJAG_02668","SJAG_04574","SJAG_02621","SJAG_01946","SJAG_03689"],"name":"cell population phenotype","references_by_uniquename":{"PMID:20368354":null,"PMID:23090706":null,"PMID:23786411":null,"PMID:23873862":null,"PMID:24184107":null,"PMID:25318672":null,"PMID:25866389":null,"PMID:26774782":null,"PMID:27678009":null,"PMID:28954740":null,"PMID:29566183":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:31150379":null,"PMID:32109380":null,"PMID:32243490":null,"PMID:32915139":null,"PMID:33791858":null,"PMID:34198697":null,"PMID:35226668":null,"PMID:36058798":null,"PMID:37164017":null,"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_03356","SJAG_01355","SJAG_03916","SJAG_02392","SJAG_01946","SJAG_04671","SJAG_04464","SJAG_04551","SJAG_00266","SJAG_04287","SJAG_01605","SJAG_00409","SJAG_00429","SJAG_03892","SJAG_03449","SJAG_04843","SJAG_01787","SJAG_00426","SJAG_02594","SJAG_02592","SJAG_03351","SJAG_05207","SJAG_03453","SJAG_00514","SJAG_01410","SJAG_03198","SJAG_01794","SJAG_02860","SJAG_01680","SJAG_01205","SJAG_03920","SJAG_04703","SJAG_01956","SJAG_04061","SJAG_00601","SJAG_02527","SJAG_02763","SJAG_03720","SJAG_01242","SJAG_02819","SJAG_03575","SJAG_00610","SJAG_01753","SJAG_04697","SJAG_05242","SJAG_03689","SJAG_04312","SJAG_02409","SJAG_00364","SJAG_04574","SJAG_02621"],"single_locus_genotype_uniquenames":["clr4delta","mrc1delta","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","cmp7delta","pom1delta","for3delta","lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","arb1delta","ned1delta","rad9delta","arb2delta","cds1delta","fum1delta","gpd1delta","tel1delta","vps4delta","gms1delta","ago1delta","pka1delta","wcs2delta","dcr1delta","sdh3delta","sty1delta","ras1delta","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","scd2delta","oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression","scd1delta","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","atf1delta","efc25delta","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cox6delta","oar2delta","pck2delta","Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","rad3delta","rad26delta","oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","stc1delta","pmk1delta","chk1delta","rad51delta","vps32delta","mdh1delta","rip1delta","cem1delta","chp1delta","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","crb2delta","pck1delta","rdp1delta","wcs1delta","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","man1delta"],"synonyms":[{"name":"fission yeast cell population phenotype","type":"exact"}],"termid":"FYPO:0000003","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000078":null,"FYECO:0000081":null,"FYECO:0000103":null,"FYECO:0000117":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000207":null,"FYECO:0000272":null,"FYECO:0000314":null,"FYECO:0000315":null,"FYPO:0000079":null,"FYPO:0000080":null,"FYPO:0000082":null,"FYPO:0000085":null,"FYPO:0000087":null,"FYPO:0000088":null,"FYPO:0000097":null,"FYPO:0000106":null,"FYPO:0000107":null,"FYPO:0000245":null,"FYPO:0000271":null,"FYPO:0000584":null,"FYPO:0000588":null,"FYPO:0000674":null,"FYPO:0000708":null,"FYPO:0000714":null,"FYPO:0000726":null,"FYPO:0000841":null,"FYPO:0001214":null,"FYPO:0001234":null,"FYPO:0001355":null,"FYPO:0001357":null,"FYPO:0001387":null,"FYPO:0001408":null,"FYPO:0001690":null,"FYPO:0002058":null,"FYPO:0002061":null,"FYPO:0003535":null,"FYPO:0004481":null,"FYPO:0004693":null,"FYPO:0005152":null,"FYPO:0005231":null,"FYPO:0005705":null,"FYPO:0007521":null,"FYPO:0007522":null,"FYPO:0008046":null,"FYPO:0009111":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: PBO:0011426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"no apparent S. cerevisiae ortholog","termid":"PBO:0011426"}


id: GO:0003120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels as a result of secretion of epinephrine into the bloodstream.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vasoconstriction by epinephrine","termid":"GO:0003115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vasoconstriction by circulating epinephrine","synonyms":[{"name":"regulation of vasoconstriction by circulating adrenaline","type":"exact"}],"termid":"GO:0003120"}


id: PBO:0079526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-yW synthesizing protein 1 homolog","termid":"PBO:0079526"}


id: FYECO:0000041
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which a sugar alcohol was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000041 sugar alcohol added (obsolete FYECO:0000041)","termid":"FYECO:0000041"}


id: FYPO:0000963
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000139","FYPO:0000003","FYPO:0002058","FYPO:0000257","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on hydroxyurea","synonyms":[{"name":"normal cell population growth in presence of hydroxyurea","type":"exact"},{"name":"normal cell population growth on HU","type":"exact"},{"name":"normal cell population growth on hydroxyurea","type":"exact"},{"name":"normal vegetative cell population growth on hydroxyurea","type":"exact"}],"termid":"FYPO:0000963"}


id: PBO:0085718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in synthesis of the thiamine precursor HMP; member of a subtelomeric gene family including THI5, THI11, THI12, and THI13; hydroxymethylpyrimidine is also known as HMP","termid":"PBO:0085718"}


id: GO:0035445
data:
  {"annotated_genes":["SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57316],"is_not":false,"summary":null,"term":"GO:0035445"},{"annotations":[107019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140159"}]},"cv_name":"biological_process","definition":"The process in which borate is transported across a membrane. Borate is the anion (BO3)3-; boron is a group 13 element, with properties which are borderline between metals and non-metals.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"borate transport","termid":"GO:0046713"},{"relation_name":"is_a","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"borate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"borate membrane transport","type":"exact"},{"name":"boron transmembrane transport","type":"related"}],"termid":"GO:0035445","terms_by_termid":{"GO:0035445":null,"GO:0140159":null}}


id: PBO:0059327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S2","termid":"PBO:0059327"}


id: SO:0002227
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant extending the CDS, that causes elongation of the resulting polypeptide sequence.","definition_xrefs":["PMID:14732127","PMID:15864293","PMID:27984720","PMID:31216041","PMID:32020195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDS","termid":"SO:0000316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS_extension","synonyms":[{"name":"CDS Extension","type":"exact"},{"name":"elongated CDS","type":"exact"},{"name":"elongated_CDS","type":"exact"}],"termid":"SO:0002227"}


id: PBO:0056307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase 3","termid":"PBO:0056307"}


id: GO:0102104
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (4-coumaroyl)acetyl-CoA + feruloyl-CoA + H2O = demethoxycurcumin + 2 coenzyme A + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete demethoxycurcumin synthase (obsolete GO:0102104)","termid":"GO:0102104"}


id: FYPO:0007885
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of Lms2-8 complex binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:33378677","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"decreased Lsm2-8 complex binding","synonyms":[{"name":"reduced Lsm2-8 complex binding","type":"exact"}],"termid":"FYPO:0007885"}


id: PBO:0071030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 32","termid":"PBO:0071030"}


id: FYPO:0006160
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad51 accumulates is lower than normal during prophase of the first meiotic nuclear division.","definition_xrefs":["PMID:16532353","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased number of Rad51 foci during meiotic prophase I","synonyms":[{"name":"decreased number of Rad51 foci during prophase I","type":"exact"},{"name":"reduced number of Rad51 foci during prophase I","type":"exact"}],"termid":"FYPO:0006160"}


id: PBO:0084967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD-dependent 5,10-methylenetetrahydrafolate dehydrogenase; plays a catalytic role in oxidation of cytoplasmic one-carbon units; expression is regulated by Bas1p and Bas2p, repressed by adenine, and may be induced by inositol and choline","termid":"PBO:0084967"}


id: GO:0098540
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the trans-Golgi network transport vesicle membrane that faces the lumen.","definition_xrefs":["GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lumenal side of transport vesicle membrane","termid":"GO:0098538"},{"relation_name":"part_of","term_name":"trans-Golgi network transport vesicle membrane","termid":"GO:0012510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"lumenal side of trans-Golgi network transport vesicle membrane","synonyms":[{"name":"internal side of trans-Golgi network transport vesicle membrane","type":"related"}],"termid":"GO:0098540"}


id: PR:Q10413
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1F3.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F3.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.08c","synonyms":[{"name":"Spom972h-SPAC1F3.08c","type":"exact"}],"termid":"PR:Q10413"}


id: PBO:0089931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex platform subcomplex scaffold subunit Apc15","termid":"PBO:0089931"}


id: PBO:0091128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific microprotein Smp3","termid":"PBO:0091128"}


id: PBO:0042504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDH23 antisense RNA 1","termid":"PBO:0042504"}


id: GO:0060252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of glial cell proliferation.","definition_xrefs":["GOC:dph","GOC:sl","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"positive regulation of gliogenesis","termid":"GO:0014015"},{"relation_name":"is_a","term_name":"regulation of glial cell proliferation","termid":"GO:0060251"},{"relation_name":"positively_regulates","term_name":"glial cell proliferation","termid":"GO:0014009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glial cell proliferation","termid":"GO:0060252"}


id: PBO:0029591
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphorylation_during_cellular_response_to_heat","termid":"PBO:0029591"}


id: PBO:0044678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage inducible 1 homolog 2","termid":"PBO:0044678"}


id: FYPO:0009024
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing cysteine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0002057","FYPO:0000139"],"is_obsolete":false,"name":"increased cell population growth on cysteine nitrogen source","synonyms":[{"name":"increased growth on cysteine nitrogen source","type":"broad"},{"name":"increased vegetative cell growth on cysteine nitrogen source","type":"exact"}],"termid":"FYPO:0009024"}


id: PBO:0051002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGBP1 antisense RNA 2","termid":"PBO:0051002"}


id: PBO:0016587
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatase Two C","termid":"PBO:0016587"}


id: GO:0034811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: benzo(a)pyrene + O2 = benzo(a)pyrene-cis-9,10-dihydrodiol.","definition_xrefs":["UM-BBD_reactionID:r1132"],"gene_count":0,"genotype_count":0,"name":"obsolete benzo(a)pyrene 9,10-dioxygenase activity (obsolete GO:0034811)","termid":"GO:0034811"}


id: GO:0002604
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of dendritic cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation","termid":"GO:0002577"},{"relation_name":"regulates","term_name":"dendritic cell antigen processing and presentation","termid":"GO:0002468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dendritic cell antigen processing and presentation","termid":"GO:0002604"}


id: PBO:0003747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor, Atf-CREB family Atf21","termid":"PBO:0003747"}


id: PBO:0088258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER transmembrane protein, DUF423 family protein, human TMEM256 ortholog, implicated in lipid metabolism or membrane organization","termid":"PBO:0088258"}


id: GO:1901528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any hydrogen peroxide mediated signaling pathway that is involved in stomatal movement.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete hydrogen peroxide mediated signaling pathway involved in stomatal movement (obsolete GO:1901528)","synonyms":[{"name":"H2O2 mediated signaling pathway involved in stomatal movement","type":"exact"},{"name":"hydrogen peroxide mediated signalling pathway involved in stomatal movement","type":"exact"}],"termid":"GO:1901528"}


id: PBO:0113063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the NuA3b histone acetyltransferase complex; binds to Pol II and stimulates elongation; regulates interaction between NuA3b and H3K36me3 at transcribed regions of genes; contains PWWP domain; protein abundance increases in response to DNA replication stress; relocalizes to the cytosol in response to hypoxia; extensive sequence similarity (~25% identity; ~39% similarity) to the N-terminal region of human NDF","termid":"PBO:0113063"}


id: FYPO:0006340
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which endocytosis occurs only at the old end of the cell during interphase of the mitotic cell cycle. Normally, endocytosis takes place at the old cell end throughout interphase, and also at the new end after NETO.","definition_xrefs":["PomBase:mah","PMID:16141239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endocytosis during vegetative growth","termid":"FYPO:0000034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"endocytosis restricted to old cell end","synonyms":[{"name":"endocytosis abolished at new cell end","type":"exact"},{"name":"endocytosis restricted to old cell end during interphase of mitotic cell cycle","type":"exact"},{"name":"endocytosis restricted to old cell end during mitotic interphase","type":"exact"},{"name":"endocytosis restricted to old cell end during vegetative growth","type":"exact"},{"name":"endocytosis restricted to old cell tip","type":"exact"}],"termid":"FYPO:0006340"}


id: PBO:0004914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein O-mannosyltransferase Ogm4","termid":"PBO:0004914"}


id: PBO:0050154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 10","termid":"PBO:0050154"}


id: GO:0070893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a transposable element is incorporated into another DNA molecule such as a chromosome.","definition_xrefs":["PMID:10882723","GOC:jp"],"gene_count":0,"genotype_count":0,"name":"obsolete transposon integration (obsolete GO:0070893)","termid":"GO:0070893"}


id: GO:0009429
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the central rod of the bacterial-type flagellar basal body that is proximal to the cell membrane; the proximal rod connects the distal rod to the flagellar motor.","definition_xrefs":["PMID:11133968","GOC:mtg_sensu","PMID:10572114","GOC:cilia","PMID:12624192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacterial-type flagellum basal body, rod","termid":"GO:0030694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial-type flagellum basal body, proximal rod","synonyms":[{"name":"flagellar basal body, proximal rod","type":"exact"},{"name":"flagellin-based flagellum basal body, proximal rod","type":"exact"}],"termid":"GO:0009429"}


id: PBO:0084040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-anchored protein involved in efficient glucose uptake; possible role in apical bud growth; GPI-anchoring on the plasma membrane crucial to function; phosphorylated in mitochondria; similar to Sps2p; ECM33 has a paralog, PST1, that arose from the whole genome duplication","termid":"PBO:0084040"}


id: RO:0002516
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x has start sequence y if the start of x is identical to the start of y, and x has y as a subsequence","direct_ancestors":[{"relation_name":"is_a","term_name":"has_subsequence","termid":"RO:0002524"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_start_sequence","termid":"RO:0002516"}


id: PBO:0054696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2105","termid":"PBO:0054696"}


id: PBO:0087730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SF3a splicing factor complex; required for spliceosome assembly; acts after the formation of the U1 snRNP-pre-mRNA complex","termid":"PBO:0087730"}


id: GO:0097205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A renal system process in which fluid circulating through the body is filtered through a barrier system.","definition_xrefs":["GOC:sart","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process","termid":"GO:0003014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal filtration","termid":"GO:0097205"}


id: GO:0047276
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-galactosyl-(1,4)-beta-N-acetyl-D-glucosaminyl-R + UDP-galactose = alpha-D-galactosyl-(1,3)-beta-D-galactosyl-(1,4)-beta-N-acetyl-D-glucosaminyl-R + UDP.","definition_xrefs":["MetaCyc:2.4.1.87-RXN","EC:2.4.1.87","RHEA:13013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"N-acetyllactosaminide 3-alpha-galactosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.151-RXN","GO:0003946"],"synonyms":[{"name":"N-acetyllactosaminide alpha-1,3-galactosyltransferase activity","type":"exact"},{"name":"UDP-Gal:Gal-beta-1->4GlcNAc-R alpha-1->3-galactosyltransferase activity","type":"related"},{"name":"UDP-Gal:Galbeta1->4GlcNAc-R alpha1->3-galactosyltransferase activity","type":"related"},{"name":"UDP-Gal:N-acetyllactosaminide alpha(1,3)-galactosyltransferase activity","type":"related"},{"name":"UDP-Gal:N-acetyllactosaminide alpha-(1,3)-galactosyltransferase activity","type":"related"},{"name":"UDP-Gal:N-acetyllactosaminide alpha-1,3-D-galactosyltransferase activity","type":"related"},{"name":"UDP-Gal:beta-D-Gal(1,4)-D-GlcNAc alpha(1,3)-galactosyltransferase activity","type":"related"},{"name":"UDP-Gal:beta-D-Gal(1,4)-D-GlcNAc alpha-(1,3)-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose-acetyllactosamine alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:N-acetyllactosaminide 3-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:beta-D-galactosyl-beta-1,4-N-acetyl-D-glucosaminyl-glycopeptide alpha-1,3-D-galactosyltransferase activity","type":"related"},{"name":"alpha-galactosyltransferase activity","type":"related"},{"name":"beta-D-galactosyl-N-acetylglucosaminylglycopeptide alpha-1,3-galactosyltransferase activity","type":"related"},{"name":"beta-galactosyl-N-acetylglucosaminylglycopeptide alpha-1,3-galactosyltransferase activity","type":"exact"},{"name":"glucosaminylglycopeptide alpha-1,3-galactosyltransferase activity","type":"related"},{"name":"uridine diphosphogalactose-acetyllactosamine alpha-1->3-galactosyltransferase activity","type":"related"},{"name":"uridine diphosphogalactose-acetyllactosamine alpha1->3-galactosyltransferase activity","type":"related"},{"name":"uridine diphosphogalactose-acetyllactosamine galactosyltransferase activity","type":"related"},{"name":"uridine diphosphogalactose-galactosylacetylglucosaminylgalactosyl-glucosylceramide galactosyltransferase activity","type":"related"},{"name":"uridine diphosphogalactose-galactosylacetylglucosaminylgalactosylglucosylceramide galactosyltransferase activity","type":"related"}],"termid":"GO:0047276"}


id: GO:0047575
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-2-(carboxymethyl)-5-oxo-2,5-dihydro-2-furoate + H+ = 5-oxo-4,5-dihydro-2-furylacetate + CO2.","definition_xrefs":["EC:4.1.1.44","RHEA:23348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"4-carboxymuconolactone decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R03470","MetaCyc:4-CARBOXYMUCONOLACTONE-DECARBOXYLASE-RXN"],"synonyms":[{"name":"4-carboxymonolactone carboxy-lyase activity","type":"related"},{"name":"4-carboxymuconolactone carboxy-lyase (4,5-dihydro-5-oxofuran-2-acetate-forming)","type":"related"},{"name":"4-carboxymuconolactone carboxy-lyase activity","type":"related"},{"name":"gamma-4-carboxymuconolactone decarboxylase activity","type":"related"}],"termid":"GO:0047575"}


id: PBO:0087785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sugar alcohol phosphatase; polyol phosphatase that hydrolyzes sorbitol-6-phosphate, ribitol-5-phosphate, and (D)-glycerol-3-phosphate, maintaining phosphoglucose isomerase (PGI) activity in the presence of PGI-inhibitory sugar alcohols; expression correlated with growth rate; GFP-fusion protein localizes to the cytoplasm and nucleus; homozygous diploid mutant displays increased glycogen accumulation; member of the haloacid dehalogenase (HAD) superfamily","termid":"PBO:0087785"}


id: PBO:0030281
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized_equatorial_microtubule_organizing_center","termid":"PBO:0030281"}


id: PBO:0047107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 156 member B","termid":"PBO:0047107"}


id: GO:0045042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The conservative import of proteins into the mitochondrial intermembrane space. The entire protein enters the matrix, and then the second targeting sequence directs the protein, presumably bound to a matrix protein, across the inner membrane to the intermembrane space.","definition_xrefs":["ISBN:0716731363"],"gene_count":0,"genotype_count":0,"name":"obsolete protein import into mitochondrial intermembrane space, conservative (obsolete GO:0045042)","synonyms":[{"name":"conservative mitochondrial IMS protein import","type":"exact"},{"name":"conservative mitochondrial intermembrane space protein import","type":"exact"},{"name":"conservative protein transport into mitochondrial IMS","type":"exact"},{"name":"conservative protein transport into mitochondrial intermembrane space","type":"exact"},{"name":"protein import into mitochondrial IMS, conservative","type":"exact"},{"name":"protein import into mitochondrial intermembrane space, conservative","type":"exact"},{"name":"protein transport into mitochondrial IMS, conservative","type":"exact"},{"name":"protein transport into mitochondrial intermembrane space, conservative","type":"exact"}],"termid":"GO:0045042"}


id: PBO:0059278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L37","termid":"PBO:0059278"}


id: PBO:0059031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MMP20 antisense RNA 1","termid":"PBO:0059031"}


id: MOD:00248
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-phenylalanine residue to form L-phenylalanine thiazole-4-carboxylic acid.","definition_xrefs":["RESID:AA0243","PubMed:1880060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-phenylalanine thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1-amino-2-phenylethyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1-azanyl-2-phenylethyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazole-4-carboxylic acid (Phe-Cys)","type":"exact"},{"name":"L-phenylalanine thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:00248"}


id: PBO:0062520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily L member 1 pseudogene","termid":"PBO:0062520"}


id: PBO:0048343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 54","termid":"PBO:0048343"}


id: FYPO:0005840
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A septation phenotype observed in the vegetative growth phase of the life cycle in which a cell forms a septum that does not have uniform thickness and does not extend over the entire cell division site.","definition_xrefs":["PomBase:mah","PMID:26877082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete septum","termid":"FYPO:0005870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000032","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"incomplete, asymmetric septum","synonyms":[{"name":"discontinuous, asymmetric secondary septum","type":"exact"},{"name":"incomplete, asymmetric secondary cell septum","type":"exact"},{"name":"incomplete, asymmetric secondary cell septum during mitotic cell cycle","type":"related"},{"name":"incomplete, asymmetric secondary cell septum during vegetative growth","type":"exact"},{"name":"incomplete, asymmetric secondary septum","type":"exact"}],"termid":"FYPO:0005840"}


id: GO:0001804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of type III hypersensitivity, a type of inflammatory response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type III hypersensitivity","termid":"GO:0001803"},{"relation_name":"is_a","term_name":"negative regulation of hypersensitivity","termid":"GO:0002884"},{"relation_name":"is_a","term_name":"negative regulation of myeloid leukocyte mediated immunity","termid":"GO:0002887"},{"relation_name":"is_a","term_name":"negative regulation of immunoglobulin mediated immune response","termid":"GO:0002890"},{"relation_name":"negatively_regulates","term_name":"type III hypersensitivity","termid":"GO:0001802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of type III hypersensitivity","synonyms":[{"name":"down regulation of type III hypersensitivity","type":"exact"},{"name":"down-regulation of type III hypersensitivity","type":"exact"},{"name":"downregulation of type III hypersensitivity","type":"exact"},{"name":"inhibition of type III hypersensitivity","type":"narrow"}],"termid":"GO:0001804"}


id: FYPO:0001453
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of ethanol than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002682","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"resistance to ethanol","synonyms":[{"name":"resistance to ethanol during mitotic cell cycle","type":"related"},{"name":"resistance to ethanol during vegetative growth","type":"exact"},{"name":"resistance to ethyl alcohol","type":"exact"},{"name":"resistant to ethanol","type":"exact"}],"termid":"FYPO:0001453"}


id: PBO:0069720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1000, pseudogene","termid":"PBO:0069720"}


id: PBO:0004509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YjgF family protein Mmf1","termid":"PBO:0004509"}


id: PBO:0067607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 775, pseudogene","termid":"PBO:0067607"}


id: GO:0098793
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of a synapse that is part of the presynaptic cell.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"presynapse","synonyms":[{"name":"presynaptic terminal","type":"exact"}],"termid":"GO:0098793"}


id: SO:0001605
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant within a CDS resulting in the gain of an amino acid to the resulting polypeptide.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_sequence_variant","termid":"SO:0001603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino_acid_insertion","synonyms":[{"name":"amino acid insertion","type":"exact"}],"termid":"SO:0001605"}


id: PBO:0111535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid transmembrane transporter Nrg1","termid":"PBO:0111535"}


id: PBO:0078801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 19-1","termid":"PBO:0078801"}


id: PBO:0083617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex; catalyzes the direct oxidative decarboxylation of pyruvate to acetyl-CoA; phosphorylated; regulated by glucose; PDH complex is concentrated in spots within the mitochondrial matrix, often near the ERMES complex and near peroxisomes","termid":"PBO:0083617"}


id: GO:1902346
data:
  {"annotated_genes":["SJAG_02294"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96703],"is_not":false,"summary":null,"term":"GO:1902346"}]},"cv_name":"biological_process","definition":"Any meiotic strand displacement that is involved in double-strand break repair via synthesis-dependent strand annealing (SDSA).","definition_xrefs":["PMID:22723423","GOC:al","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic strand displacement","termid":"GO:0000714"},{"relation_name":"part_of","term_name":"double-strand break repair via synthesis-dependent strand annealing","termid":"GO:0045003"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006281","GO:0007049","GO:0006259"],"is_obsolete":false,"name":"meiotic strand displacement involved in double-strand break repair via SDSA","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"meiotic D-loop dissociation involved in double-strand break repair via synthesis-dependent strand annealing","type":"related"},{"name":"meiotic D-loop dissociation involved in mitotic gene conversion","type":"related"},{"name":"meiotic D-loop processing involved in double-strand break repair via synthesis-dependent strand annealing","type":"related"},{"name":"meiotic D-loop processing involved in mitotic gene conversion","type":"related"},{"name":"meiotic displacement loop dissociation involved in double-strand break repair via synthesis-dependent strand annealing","type":"related"},{"name":"meiotic displacement loop dissociation involved in mitotic gene conversion","type":"related"},{"name":"meiotic displacement loop processing involved in double-strand break repair via synthesis-dependent strand annealing","type":"related"},{"name":"meiotic displacement loop processing involved in mitotic gene conversion","type":"related"},{"name":"meiotic strand displacement involved in SDSA","type":"broad"},{"name":"meiotic strand displacement involved in double-strand break repair via synthesis-dependent strand annealing","type":"exact"},{"name":"meiotic strand displacement involved in mitotic gene conversion","type":"related"}],"termid":"GO:1902346","terms_by_termid":{"GO:1902346":null}}


id: GO:0006876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A homeostatic process involved in the maintenance of a steady state level of cadmium ions within a cell.","definition_xrefs":["GOC:mah","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete intracellular cadmium ion homeostasis (obsolete GO:0006876)","synonyms":[{"name":"cadmium homeostasis","type":"broad"},{"name":"cellular cadmium ion homeostasis","type":"exact"}],"termid":"GO:0006876"}


id: PR:O42651
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg17 gene.","definition_xrefs":["UniProtKB:O42651","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy-related protein 17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.11c","synonyms":[{"name":"Spom972h-atg17","type":"exact"}],"termid":"PR:O42651"}


id: PBO:0084400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lunapark family member involved in ER network formation; regulates the ER asymmetry-induced inheritance block during ER stress; localizes to ER junctions and this localization is regulated by the yeast atlastin ortholog Sey1p; required for reticulophagy where it is proposed to stabilize the actin-dependent remodeling of the ER; interacts with the reticulon protein Rtn1p; induced in response to the DNA-damaging agent MMS","termid":"PBO:0084400"}


id: SO:0002157
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene cassette array containing H+ mating type specific information.","definition_xrefs":["PMID:18354497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silent_mating_type_cassette_array","termid":"SO:0001984"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mat2P","termid":"SO:0002157"}


id: PBO:0031526
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_DNA-1,N6-ethenoadenine_N-glycosylase_activity","termid":"PBO:0031526"}


id: PBO:0089348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial sorting and assembly machinery complex subunit Sam50","termid":"PBO:0089348"}


id: GO:0071062
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphav-beta3 integrin complex bound to vitronectin.","definition_xrefs":["PMID:10835423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alphav-beta3 integrin-vitronectin complex","synonyms":[{"name":"ITGAV-ITGB3-VTN complex","type":"narrow"}],"termid":"GO:0071062"}


id: GO:1990131
data:
  {"annotated_genes":["SJAG_03371","SJAG_00457"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[105311,114423],"is_not":false,"summary":null,"term":"GO:1990131"}]},"cv_name":"cellular_component","definition":"A heterodimer GTPase complex. In S. cerevisiae, this complex contains Gtr1p and Gtr2p proteins.","definition_xrefs":["GOC:rb","PMID:10388807","PMID:16143306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTPase complex","termid":"GO:1905360"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00457":null,"SJAG_03371":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Gtr1-Gtr2 GTPase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990131","terms_by_termid":{"GO:1990131":null}}


id: PBO:0082692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the histone deacetylase Rpd3L complex; possibly involved in cell fusion and invasive growth; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0082692"}


id: PBO:0040818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BICRA like chromatin remodeling complex associated protein","termid":"PBO:0040818"}


id: GO:0010294
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-abscisate + UDP-D-glucose = abscisic acid glucose ester + UDP.","definition_xrefs":["DOI:10.1016/j.tetasy.2004.11.062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"abscisic acid glucosyltransferase activity","secondary_identifiers":["RHEA:31031","MetaCyc:RXN-8155"],"termid":"GO:0010294"}


id: GO:0034858
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxybenzothiazole + 1/2 O2 = 2,6-dihydroxybenzothiazole.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxybenzothiazole monooxygenase activity (obsolete GO:0034858)","termid":"GO:0034858"}


id: PBO:0075458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 8","termid":"PBO:0075458"}


id: PBO:0059515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded long non-coding cardiac associated RNA","termid":"PBO:0059515"}


id: GO:0061097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of protein tyrosine kinase activity.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein kinase activity","termid":"GO:0045859"},{"relation_name":"is_a","term_name":"regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein tyrosine kinase activity","termid":"GO:0061097"}


id: PBO:0017597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein Ssz1 (predicted)","termid":"PBO:0017597"}


id: PBO:0034693
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K16_acetylation_at_telomere","termid":"PBO:0034693"}


id: PBO:0043607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic oncogenic antisense to MET transcript","termid":"PBO:0043607"}


id: PBO:0067493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 628, pseudogene","termid":"PBO:0067493"}


id: _global:inheres_in_part_of
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"q characteristic of part of w if and only if there exists some p such that q inheres in p and p part of w.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inheres_in_part_of","secondary_identifiers":["RO:0002314"],"termid":"_global:inheres_in_part_of"}


id: PBO:0056651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 18","termid":"PBO:0056651"}


id: PBO:0091564
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3 is incorporated as a placeholder in new nucleosomes at centromeres during mitotic S phase, and is replaced by Cnp1 (CENP-A) in G2 phase","termid":"PBO:0091564"}


id: PBO:0062825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OSGEPL1 antisense RNA 1","termid":"PBO:0062825"}


id: PBO:0064167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group IVD","termid":"PBO:0064167"}


id: GO:0032741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-18 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-18 production","termid":"GO:0032661"},{"relation_name":"positively_regulates","term_name":"interleukin-18 production","termid":"GO:0032621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-18 production","secondary_identifiers":["GO:0045383","GO:0150122"],"synonyms":[{"name":"activation of interleukin-18 production","type":"narrow"},{"name":"positive regulation of IL-18 production","type":"exact"},{"name":"positive regulation of interleukin-18 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-18 secretion","type":"narrow"},{"name":"stimulation of interleukin-18 production","type":"narrow"},{"name":"up regulation of interleukin-18 production","type":"exact"},{"name":"up-regulation of interleukin-18 production","type":"exact"},{"name":"upregulation of interleukin-18 production","type":"exact"}],"termid":"GO:0032741"}


id: SO:0001698
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"\\\"A primer containing an SNV at the 3' end for accurate genotyping.","direct_ancestors":[{"relation_name":"is_a","term_name":"primer","termid":"SO:0000112"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASPE_primer","synonyms":[{"name":"ASPE primer","type":"exact"},{"name":"allele specific primer extension primer","type":"exact"}],"termid":"SO:0001698"}


id: PBO:0060086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 33","termid":"PBO:0060086"}


id: PBO:0081102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger E-box binding homeobox 2","termid":"PBO:0081102"}


id: GO:0043383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of elimination of immature T cells which react strongly with self-antigens.","definition_xrefs":["ISBN:0781735149","PMID:12414722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell selection","termid":"GO:0045058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative T cell selection","synonyms":[{"name":"negative T lymphocyte selection","type":"exact"},{"name":"negative T-cell selection","type":"exact"},{"name":"negative T-lymphocyte selection","type":"exact"}],"termid":"GO:0043383"}


id: PBO:0034770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-diacylglycerol-glycerol-3-phosphate3-phosphatidyltransferase Pgs1","termid":"PBO:0034770"}


id: PATO:0000538
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000538 alkali sensitivity value (obsolete PATO:0000538)","termid":"PATO:0000538"}


id: GO:0003930
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate.","definition_xrefs":["EC:3.6.1.47"],"gene_count":0,"genotype_count":0,"name":"obsolete RAS small monomeric GTPase activity (obsolete GO:0003930)","synonyms":[{"name":"RAS small monomeric GTPase activity","type":"exact"}],"termid":"GO:0003930"}


id: GO:0008426
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of protein kinase C, an enzyme which phosphorylates a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase inhibitor activity","termid":"GO:0030291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0030234","GO:0098772","GO:0004857","GO:0003674","GO:0140678"],"is_obsolete":false,"name":"protein kinase C inhibitor activity","secondary_identifiers":["GO:0004863"],"synonyms":[{"name":"PKC inhibitor activity","type":"exact"},{"name":"diacylglycerol-activated phospholipid-dependent PKC inhibitor activity","type":"exact"},{"name":"diacylglycerol-activated phospholipid-dependent protein kinase C inhibitor activity","type":"exact"}],"termid":"GO:0008426"}


id: PBO:0059888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 11","termid":"PBO:0059888"}


id: PBO:0055216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2642","termid":"PBO:0055216"}


id: GO:0080165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which callose is transported to, and/or maintained in, phloem sieve plate. Callose is a linear 1,3-beta-d-glucan formed from UDP-glucose and is found in certain plant cell walls.","definition_xrefs":["PMID:19470642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"callose localization","termid":"GO:0052545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"callose deposition in phloem sieve plate","termid":"GO:0080165"}


id: PBO:0005246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically upregulated gene Mug123","termid":"PBO:0005246"}


id: PBO:0078124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 8-6","termid":"PBO:0078124"}


id: PR:Q9UTM9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fap2 gene.","definition_xrefs":["UniProtKB:Q9UTM9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-saccharopine oxidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC139.04c","synonyms":[{"name":"Spom972h-fap2","type":"exact"}],"termid":"PR:Q9UTM9"}


id: GO:0009699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of aromatic derivatives of trans-cinnamic acid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid metabolic process","termid":"GO:0009698"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"phenylpropanoid biosynthetic process","synonyms":[{"name":"phenylpropanoid anabolism","type":"exact"},{"name":"phenylpropanoid biosynthesis","type":"exact"},{"name":"phenylpropanoid formation","type":"exact"},{"name":"phenylpropanoid synthesis","type":"exact"}],"termid":"GO:0009699"}


id: GO:0140240
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A neuron to neuron synapse of a pyramidal neuron in the entorhinal cortex onto a granule cell in the dentate gyrus of the hippocampus.","definition_xrefs":["PMID:29199135","PMID:22727665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"perforant pathway to dendrate granule cell synapse","synonyms":[{"name":"perforant pathway to DG granule cell synapse","type":"exact"}],"termid":"GO:0140240"}


id: PBO:0091427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase","termid":"PBO:0091427"}


id: PBO:0005091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S8 (predicted)","termid":"PBO:0005091"}


id: GO:0034020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-violaxanthin = all-trans-neoxanthin.","definition_xrefs":["RHEA:10128","EC:5.3.99.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"neoxanthin synthase activity","secondary_identifiers":["KEGG_REACTION:R06948","MetaCyc:RXN1F-155"],"synonyms":[{"name":"NSY","type":"related"},{"name":"violaxanthin-neoxanthin isomerase (epoxide-opening) activity","type":"related"}],"termid":"GO:0034020"}


id: GO:0007294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process in which a germarium-derived cell becomes capable of differentiating autonomously into an oocyte cell regardless of its environment; upon determination, the cell fate cannot be reversed. An example of this is found in Drosophila melanogaster.","definition_xrefs":["ISBN:0879694238","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"oocyte fate determination","termid":"GO:0030716"},{"relation_name":"part_of","term_name":"germarium-derived oocyte differentiation","termid":"GO:0030706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germarium-derived oocyte fate determination","secondary_identifiers":["GO:0016350"],"synonyms":[{"name":"maintenance of oocyte identity","type":"related"},{"name":"oocyte cell fate determination","type":"related"}],"termid":"GO:0007294"}


id: GO:0050803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the physical form or the activity of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of synapse structure or activity","termid":"GO:0050803"}


id: FYPO:0006175
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the centromere of a chromosome is abnormal during metaphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during vegetative growth","termid":"FYPO:0000449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization to centromere during mitotic metaphase","synonyms":[{"name":"abnormal protein localisation to centromere during mitotic metaphase","type":"exact"},{"name":"abnormal protein localisation to chromosome, centromeric region during mitotic metaphase","type":"exact"},{"name":"abnormal protein localization to centromere during metaphase during vegetative growth","type":"exact"},{"name":"abnormal protein localization to chromosome, centric region during mitotic metaphase","type":"exact"},{"name":"abnormal protein localization to chromosome, centromeric region during mitotic metaphase","type":"exact"}],"termid":"FYPO:0006175"}


id: PBO:0067497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 633, pseudogene","termid":"PBO:0067497"}


id: GO:0090260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate, or extent of retinal ganglion cell axon guidance, the process in which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues.","definition_xrefs":["GOC:tb","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of retinal ganglion cell axon guidance","termid":"GO:0090259"},{"relation_name":"is_a","term_name":"negative regulation of axon guidance","termid":"GO:1902668"},{"relation_name":"negatively_regulates","term_name":"retinal ganglion cell axon guidance","termid":"GO:0031290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of retinal ganglion cell axon guidance","synonyms":[{"name":"axon growth cone collapse","type":"related"}],"termid":"GO:0090260"}


id: PBO:0048204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit beta2","termid":"PBO:0048204"}


id: PBO:0039686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloid beta precursor protein binding family B member 3","termid":"PBO:0039686"}


id: PBO:0089537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2B-K119 ubiquitin ligase complex (HULC) subunit, ubiquitin-protein ligase E3 Brl2","termid":"PBO:0089537"}


id: FYPO:0004846
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of DNA replication pause sites in telomeric regions at which the protein Rad52 (also called Rad22) accumulates is greater than normal.","definition_xrefs":["PMID:26041456","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of Rad52 foci during vegetative growth","termid":"FYPO:0000972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased number of Rad52 foci at telomeres","synonyms":[{"name":"increased number of Rad22 foci at telomeres","type":"exact"},{"name":"increased number of Rad52 foci at telomeres during mitotic cell cycle","type":"related"},{"name":"increased number of Rad52 foci at telomeres during vegetative growth","type":"exact"}],"termid":"FYPO:0004846"}


id: GO:0008556
data:
  {"annotated_genes":["SJAG_04167"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108410],"is_not":false,"summary":null,"term":"GO:0008556"},{"annotations":[108411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008900"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + K+(out) = ADP + phosphate + K+(in).","definition_xrefs":["RHEA:16777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium ion transmembrane transporter activity","termid":"GO:0015079"},{"relation_name":"is_a","term_name":"P-type ion transporter activity","termid":"GO:0015662"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04167":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"P-type potassium transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015618","EC:7.2.2.6","MetaCyc:TRANS-RXN-2"],"synonyms":[{"name":"ATP phosphohydrolase (K+-importing)","type":"related"},{"name":"ATP-dependent potassium transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled potassium transmembrane transporter activity","type":"related"},{"name":"K(+)-importing ATPase activity","type":"narrow"},{"name":"K(+)-transporting ATPase activity","type":"related"},{"name":"K+-importing ATPase activity","type":"related"},{"name":"K+-transporting ATPase activity","type":"exact"},{"name":"potassium ABC transporter","type":"narrow"},{"name":"potassium transmembrane transporter activity, phosphorylative mechanism","type":"exact"},{"name":"potassium transporting ATPase activity","type":"exact"},{"name":"potassium-importing ATPase activity","type":"narrow"},{"name":"potassium-transporting ATPase activity","type":"exact"},{"name":"potassium-uptake-ATPase activity","type":"exact"}],"termid":"GO:0008556","terms_by_termid":{"GO:0008556":null,"GO:0008900":null}}


id: PBO:0066034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN pseudogene 3","termid":"PBO:0066034"}


id: PBO:0076837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TERF1 pseudogene 4","termid":"PBO:0076837"}


id: CHEBI:16480
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide","termid":"CHEBI:16480"}


id: FYPO:0005942
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency of occurrence of intergenic meiotic recombination is normal (i.e. indistinguishable from wild type). Intergenic meiotic recombination reflects crossovers between homologous chromosomes.","definition_xrefs":["PMID:19752195","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal intergenic meiotic recombination frequency","synonyms":[{"name":"normal meiotic intergenic recombination frequency","type":"exact"}],"termid":"FYPO:0005942"}


id: FYPO:0003897
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An abnormal intracellular mitochondrion distribution phenotype observed in the vegetative growth phase of the life cycle in which mitochondria cluster together more than normal during a cellular response to reactive oxygen species.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial aggregation","termid":"FYPO:0000895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"mitochondrial aggregation during cellular response to reactive oxygen species","synonyms":[{"name":"aggregated mitochondria during cellular response to reactive oxygen species","type":"narrow"},{"name":"mitochondrial aggregation at cell end during cellular response to reactive oxygen species","type":"related"},{"name":"mitochondrial aggregation at cell tip during cellular response to reactive oxygen species","type":"related"},{"name":"mitochondrial aggregation during cellular response to ROS","type":"exact"},{"name":"mitochondrial aggregation during cellular response to reactive oxygen species during mitotic cell cycle","type":"related"},{"name":"mitochondrial aggregation during cellular response to reactive oxygen species during vegetative growth","type":"exact"}],"termid":"FYPO:0003897"}


id: PBO:0079085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 2-1","termid":"PBO:0079085"}


id: GO:0004661
data:
  {"annotated_genes":["SJAG_04923","SJAG_03029","SJAG_04434","SJAG_03810"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97458],"is_not":false,"summary":null,"term":"GO:0004661"},{"annotations":[91784,97455,91783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004662"},{"annotations":[85596,111018,97459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004663"}]},"cv_name":"molecular_function","definition":"Catalysis of the covalent addition of a geranylgeranyl (20-carbon isoprenoid) group via thioether linkages to a cysteine residue at or near the C terminus of a protein.","definition_xrefs":["PMID:8621375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein prenyltransferase activity","termid":"GO:0008318"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03029":null,"SJAG_03810":null,"SJAG_04434":null,"SJAG_04923":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016765","GO:0016740","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"protein geranylgeranyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0018224","RHEA:21240"],"synonyms":[{"name":"protein-cysteine geranylgeranyltransferase activity","type":"exact"}],"termid":"GO:0004661","terms_by_termid":{"GO:0004661":null,"GO:0004662":null,"GO:0004663":null}}


id: GO:0060784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell proliferation resulting in the maintenance of a steady-state number of cells within a tissue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"part_of","term_name":"homeostasis of number of cells within a tissue","termid":"GO:0048873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell proliferation involved in tissue homeostasis","termid":"GO:0060784"}


id: MOD:01252
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00933. Remap to MOD:00933.","definition_xrefs":["Unimod:319#R","PubMed:9448752"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01252 5-hydro-5-methylimidazol-4-one, methylglyoxal arginine adduct (+54 amu) (obsolete MOD:01252)","synonyms":[{"name":"Delta:H(2)C(3)O(1)","type":"related"},{"name":"MDA adduct +54","type":"related"}],"termid":"MOD:01252"}


id: PBO:0079503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin pseudogene 1","termid":"PBO:0079503"}


id: GO:0043261
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha2, beta1 and gamma3 polypeptide chains.","definition_xrefs":["PMID:10842354","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"laminin-12 complex","synonyms":[{"name":"laminin-213 complex","type":"exact"}],"termid":"GO:0043261"}


id: GO:0033134
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a ubiquitin activating enzyme, any of the E1 proteins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small protein activating enzyme binding","termid":"GO:0044388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"ubiquitin activating enzyme binding","termid":"GO:0033134"}


id: PBO:0049998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeodomain interacting protein kinase 4","termid":"PBO:0049998"}


id: GO:0003147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The characteristic movement of a cell from the dorsal ridge of the neural tube towards the heart and that contributes to heart formation.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural crest cell migration","termid":"GO:0001755"},{"relation_name":"is_a","term_name":"cell migration involved in heart formation","termid":"GO:0060974"},{"relation_name":"part_of","term_name":"cardiac neural crest cell development involved in heart development","termid":"GO:0061308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest cell migration involved in heart formation","termid":"GO:0003147"}


id: GO:0003829
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-galactosyl-(1->3)-N-acetyl-D-galactosaminyl-R = UDP + beta-D-galactosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->6)]-N-acetyl-D-galactosaminyl-R.","definition_xrefs":["EC:2.4.1.102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity","secondary_identifiers":["Reactome:R-HSA-914012","MetaCyc:2.4.1.102-RXN","RHEA:18705","Reactome:R-HSA-914018"],"synonyms":[{"name":"O-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase I activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:O-glycosyl-glycoprotein (N-acetyl-D-glucosamine to N-acetyl-D-galactosamine of beta-D-galactosyl-1,3-N-acetyl-D-galactosaminyl-R) beta-1,6-N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"beta(6)-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"beta6-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"core 2 acetylglucosaminyltransferase activity","type":"related"},{"name":"core 6-beta-GlcNAc-transferase A","type":"related"},{"name":"uridine diphosphoacetylglucosamine-mucin beta-(1,6)-acetylglucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-mucin beta-(1->6)-acetylglucosaminyltransferase activity","type":"related"}],"termid":"GO:0003829"}


id: FYPO:0002843
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the nucleoplasm is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to nucleus during vegetative growth","termid":"FYPO:0000784"},{"relation_name":"output_of","term_name":"abnormal protein localization to nucleoplasm","termid":"FYPO:0002529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"protein mislocalized to nucleoplasm","synonyms":[{"name":"ectopic protein localization to nucleoplasm","type":"exact"},{"name":"protein mislocalised to nucleoplasm","type":"exact"},{"name":"protein mislocalised to nucleoplasm during vegetative growth","type":"exact"},{"name":"protein mislocalized to nucleoplasm during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to nucleoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0002843"}


id: PBO:0087775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of UAF (upstream activation factor) complex; UAF is an RNA polymerase I specific transcription stimulatory factor composed of Uaf30p, Rrn5p, Rrn9p, Rrn10p, histones H3 and H4; targeting factor for the UAF that facilitates activation of many rDNA genes; deletion decreases cellular growth rate; UAF30 has a paralog, TRI1, that arose from the whole genome duplication","termid":"PBO:0087775"}


id: FYPO:0004083
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell","termid":"FYPO:0001076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein level","synonyms":[{"name":"protein/peptide accumulation: normal","type":"related"}],"termid":"FYPO:0004083"}


id: GO:0004201
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of interleukin 1-beta by specific cleavage of Asp116-Ala117 and Asp27-Gly28 bonds in precursor. Enzymes with this function can also hydrolyze the terminal bond in the small-molecule substrate, Ac-Tyr-Val-Ala-Asp-NHMec.","definition_xrefs":["EC:3.4.22.36"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase-1 activity (obsolete GO:0004201)","synonyms":[{"name":"ICE","type":"broad"},{"name":"caspase-1 activity","type":"exact"}],"termid":"GO:0004201"}


id: PBO:0012594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit beta 1 Pre3 (predicted)","termid":"PBO:0012594"}


id: GO:0060981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell from one site to another that will contribute to the formation of new blood vessels in the heart from pre-existing blood vessels.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in heart development","termid":"GO:0060973"},{"relation_name":"part_of","term_name":"angiogenesis involved in coronary vascular morphogenesis","termid":"GO:0060978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in coronary angiogenesis","termid":"GO:0060981"}


id: GO:0004609
data:
  {"annotated_genes":["SJAG_02902","SJAG_02980","SJAG_03524"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90712,92480,100399],"is_not":false,"summary":null,"term":"GO:0004609"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + phosphatidyl-L-serine = CO2 + phosphatidylethanolamine.","definition_xrefs":["RHEA:20828","EC:4.1.1.65"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02902":null,"SJAG_02980":null,"SJAG_03524":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"phosphatidylserine decarboxylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1483212","KEGG_REACTION:R02055","MetaCyc:PHOSPHASERDECARB-RXN"],"synonyms":[{"name":"PS decarboxylase activity","type":"related"},{"name":"phosphatidyl-L-serine carboxy-lyase (phosphatidylethanolamine-forming)","type":"related"},{"name":"phosphatidyl-L-serine carboxy-lyase activity","type":"related"}],"termid":"GO:0004609","terms_by_termid":{"GO:0004609":null}}


id: FYPO:0003992
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to menadione is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal RNA level during cellular response to menadione","synonyms":[{"name":"normal RNA accumulation during cellular response to menadione","type":"related"},{"name":"normal RNA level during cellular response to menadione during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to menadione during vegetative growth","type":"exact"},{"name":"normal mRNA level during cellular response to menadione","type":"narrow"},{"name":"normal transcript level during cellular response to menadione","type":"exact"}],"termid":"FYPO:0003992"}


id: PBO:0003193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear membrane organization protein Apq12 (predicted)","termid":"PBO:0003193"}


id: PBO:0053609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 642","termid":"PBO:0053609"}


id: GO:0044610
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of flavine mononucleotide (FMN) from one side of a membrane to the other.","definition_xrefs":["GOC:ans","PMID:22185573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transporter activity","termid":"GO:0015215"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"FMN transmembrane transporter activity","synonyms":[{"name":"flavine mononucleotide transmembrane transporter activity","type":"exact"}],"termid":"GO:0044610"}


id: PBO:0083207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene YJL197C/UBP12","termid":"PBO:0083207"}


id: GO:0015746
data:
  {"annotated_genes":["SJAG_01872","SJAG_00275"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87829,108326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006843"}]},"cv_name":"biological_process","definition":"The directed movement of citrate, 2-hydroxy-1,2,3-propanetricarboyxlate, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid transport","termid":"GO:0006842"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00275":null,"SJAG_01872":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"citrate transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015746","terms_by_termid":{"GO:0006843":null}}


id: PBO:0074112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 29 member 4","termid":"PBO:0074112"}


id: PBO:0063695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein geranylgeranyltransferase type I subunit beta pseudogene 2","termid":"PBO:0063695"}


id: GO:1904690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cytoplasmic translational initiation.","definition_xrefs":["GOC:TermGenie","PMID:12242291","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translational initiation","termid":"GO:0045948"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic translational initiation","termid":"GO:1904688"},{"relation_name":"positively_regulates","term_name":"cytoplasmic translational initiation","termid":"GO:0002183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0002181","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of cytoplasmic translational initiation","synonyms":[{"name":"activation of cytoplasmic translational initiation","type":"narrow"},{"name":"up regulation of cytoplasmic translational initiation","type":"exact"},{"name":"up-regulation of cytoplasmic translational initiation","type":"exact"},{"name":"upregulation of cytoplasmic translational initiation","type":"exact"}],"termid":"GO:1904690"}


id: PBO:0045901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"estrogen-induced osteoclastogenesis regulator 1","termid":"PBO:0045901"}


id: PBO:0058964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"makorin ring finger protein 7, pseudogene","termid":"PBO:0058964"}


id: FYPO:0002340
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of DNA recombination is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination during vegetative growth","termid":"FYPO:0001345"},{"relation_name":"is_a","term_name":"decreased DNA recombination","termid":"FYPO:0002712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000293","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased DNA recombination during vegetative growth","synonyms":[{"name":"decreased DNA recombination during mitotic cell cycle","type":"related"},{"name":"decreased DNA recombination frequency during vegetative growth","type":"exact"},{"name":"decreased DNA recombination rate during vegetative growth","type":"related"},{"name":"decreased recombination during vegetative growth","type":"exact"},{"name":"reduced DNA recombination during vegetative growth","type":"exact"}],"termid":"FYPO:0002340"}


id: GO:2000776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any histone H4 acetylation that is involved in a response to DNA damage stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4 acetylation involved in response to DNA damage stimulus (obsolete GO:2000776)","synonyms":[{"name":"histone H4 acetylation of DNA damage response","type":"exact"},{"name":"histone H4 acetylation of cellular DNA damage response","type":"exact"},{"name":"histone H4 acetylation of cellular response to DNA damage stimulus","type":"exact"},{"name":"histone H4 acetylation of response to DNA damage stimulus","type":"exact"},{"name":"histone H4 acetylation of response to genotoxic stress","type":"exact"}],"termid":"GO:2000776"}


id: GO:0008592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the Tl signaling pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"Toll signaling pathway","termid":"GO:0008063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of Toll signaling pathway","synonyms":[{"name":"regulation of Tl signaling pathway","type":"exact"},{"name":"regulation of Tl signalling pathway","type":"exact"},{"name":"regulation of Toll signalling pathway","type":"exact"}],"termid":"GO:0008592"}


id: GO:0018339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-aspartic acid to form peptidyl-L-beta-methylthioaspartic acid, typical of bacterial ribosomal protein S12.","definition_xrefs":["RESID:AA0232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-aspartic acid modification","termid":"GO:0018197"},{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid","synonyms":[{"name":"peptidyl-L-beta-methylthioaspartic acid anabolism from peptidyl-aspartic acid","type":"exact"},{"name":"peptidyl-L-beta-methylthioaspartic acid formation from peptidyl-aspartic acid","type":"exact"},{"name":"peptidyl-L-beta-methylthioaspartic acid synthesis from peptidyl-aspartic acid","type":"exact"},{"name":"peptidyl-aspartic acid methylthiolation","type":"exact"}],"termid":"GO:0018339"}


id: PBO:0056384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 14","termid":"PBO:0056384"}


id: GO:0106155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protein L-lysine + 2-oxoglutarate + O2 = protein 3-hydroxy-L-lysine + succinate + CO2.","definition_xrefs":["PMID:29915238","GOC:al","RHEA:57152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0140096","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"peptidyl-lysine 3-dioxygenase activity","secondary_identifiers":["Reactome:R-HSA-9629578","Reactome:R-HSA-9629591","EC:1.14.11.63"],"termid":"GO:0106155"}


id: PR:Q96UP3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rif1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q96UP3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere length regulator protein rif1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.17","synonyms":[{"name":"Spom972h-rif1","type":"exact"}],"termid":"PR:Q96UP3"}


id: MOD:01853
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to L-lysinoalanine either by forming a cross-link with peptidyl-cysteine or peptidyl-serine, or by condensation with free serine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lysinoalanine","termid":"MOD:01853"}


id: PBO:0066794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 93","termid":"PBO:0066794"}


id: PBO:0066360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCSD domain containing 1","termid":"PBO:0066360"}


id: GO:0140671
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chromatin remodeling complex that regulates transcription via acetylation primarily of nucleosomal histones H3 and H2B. In budding yeast shares the histone acetylation (HAT) module of ADA2-GCN5-NGG1-SGF29 with the related SAGA complex.","definition_xrefs":["PMID:21734642","GOC:bhm","PMID:28966424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SAGA-type complex","termid":"GO:0070461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"ADA complex","synonyms":[{"name":"ADA HAT complex","type":"exact"},{"name":"ADA histone acetyltransferase complex","type":"exact"},{"name":"Ada2/Gcn5/Ada3 transcription activator complex","type":"related"},{"name":"scADA","type":"narrow"}],"termid":"GO:0140671"}


id: PBO:0030273
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_mitotic_DNA_replication_initiation_resulting_in_complete_rereplication","termid":"PBO:0030273"}


id: GO:0003864
data:
  {"annotated_genes":["SJAG_05200"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94797],"is_not":false,"summary":null,"term":"GO:0003864"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,10-methylenetetrahydrofolate + 3-methyl-2-oxobutanoate = tetrahydrofolate + 2-dehydropantoate.","definition_xrefs":["EC:2.1.2.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05200":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"3-methyl-2-oxobutanoate hydroxymethyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN","RHEA:11824"],"synonyms":[{"name":"5,10-methylene tetrahydrofolate:alpha-ketoisovalerate hydroxymethyltransferase activity","type":"related"},{"name":"5,10-methylenetetrahydrofolate:3-methyl-2-oxobutanoate hydroxymethyltransferase activity","type":"related"},{"name":"alpha-ketoisovalerate hydroxymethyltransferase activity","type":"related"},{"name":"dehydropantoate hydroxymethyltransferase activity","type":"related"},{"name":"ketopantoate hydroxymethyltransferase activity","type":"related"},{"name":"oxopantoate hydroxymethyltransferase activity","type":"related"}],"termid":"GO:0003864","terms_by_termid":{"GO:0003864":null}}


id: SO:0001822
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An inframe non synonymous variant that deletes bases from the coding sequence.","definition_xrefs":["EBI:gr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inframe_indel","termid":"SO:0001820"},{"relation_name":"is_a","term_name":"feature_truncation","termid":"SO:0001906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inframe_deletion","secondary_identifiers":["SO:0001652","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences","http://snpeff.sourceforge.net/SnpEff_manual.html","http://vat.gersteinlab.org/formats.php"],"synonyms":[{"name":"ANNOVAR:nonframeshift deletion","type":"exact"},{"name":"Jannovar:inframe_deletion","type":"exact"},{"name":"VAT:deletionNFS","type":"exact"},{"name":"VEP:inframe_deletion","type":"exact"},{"name":"inframe codon loss","type":"related"},{"name":"inframe decrease in CDS length","type":"exact"},{"name":"inframe deletion","type":"related"},{"name":"inframe_codon_loss","type":"exact"},{"name":"snpEff:CODON_DELETION","type":"related"}],"termid":"SO:0001822"}


id: PBO:0067939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 241","termid":"PBO:0067939"}


id: PBO:0045853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 43","termid":"PBO:0045853"}


id: PBO:0111645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone chaperone/ATP-dependent chromatin remodeller, SMARCAD1 family Fft3","termid":"PBO:0111645"}


id: GO:0004536
data:
  {"annotated_genes":["SJAG_01044","SJAG_02828","SJAG_02556","SJAG_01832","SJAG_05373","SJAG_04752","SJAG_00377","SJAG_02031","SJAG_01262","SJAG_00623","SJAG_01648","SJAG_01173","SJAG_03734","SJAG_05280","SJAG_02818","SJAG_02298","SJAG_02908","SJAG_01163","SJAG_04410","SJAG_02708","SJAG_01948","SJAG_05237","SJAG_03994","SJAG_04183","SJAG_03675"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86445],"is_not":false,"summary":null,"term":"GO:0004536"},{"annotations":[114828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990599"},{"annotations":[101276,105165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008296"},{"annotations":[113181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048257"},{"annotations":[101986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990043"},{"annotations":[100223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990601"},{"annotations":[84464,89049,93193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035312"},{"annotations":[84465,100224,97231,99260,93194,103813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017108"},{"annotations":[97583,90792,92990,59336,113182,97232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008821"},{"annotations":[111752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033699"},{"annotations":[86444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004520"},{"annotations":[106006,84620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008311"},{"annotations":[93196,103814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051908"},{"annotations":[97233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990238"},{"annotations":[97234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106332"},{"annotations":[97202,103410,84623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008310"},{"annotations":[107650,93198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045145"},{"annotations":[84624,106084,86449,106882],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000014"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid.","definition_xrefs":["GOC:mah","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease activity","termid":"GO:0004518"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00377":null,"SJAG_00623":null,"SJAG_01044":null,"SJAG_01163":null,"SJAG_01173":null,"SJAG_01262":null,"SJAG_01648":null,"SJAG_01832":null,"SJAG_01948":null,"SJAG_02031":null,"SJAG_02298":null,"SJAG_02556":null,"SJAG_02708":null,"SJAG_02818":null,"SJAG_02828":null,"SJAG_02908":null,"SJAG_03675":null,"SJAG_03734":null,"SJAG_03994":null,"SJAG_04183":null,"SJAG_04410":null,"SJAG_04752":null,"SJAG_05237":null,"SJAG_05280":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0140097","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"DNA nuclease activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0004537","Reactome:R-HSA-211247","Reactome:R-HSA-5685994","Reactome:R-HSA-6785986"],"synonyms":[{"name":"caspase-activated deoxyribonuclease activity","type":"narrow"},{"name":"deoxyribonuclease activity","type":"exact"}],"termid":"GO:0004536","terms_by_termid":{"GO:0000014":null,"GO:0004520":null,"GO:0004536":null,"GO:0008296":null,"GO:0008310":null,"GO:0008311":null,"GO:0008821":null,"GO:0017108":null,"GO:0033699":null,"GO:0035312":null,"GO:0045145":null,"GO:0048257":null,"GO:0051908":null,"GO:0106332":null,"GO:1990043":null,"GO:1990238":null,"GO:1990599":null,"GO:1990601":null}}


id: PBO:0050820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronidase 6, pseudogene","termid":"PBO:0050820"}


id: PBO:0054525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1925","termid":"PBO:0054525"}


id: GO:0019954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of reproduction in which new individuals are produced from a single organism, either from an unfertilized egg or from a single cell or group of cells.","definition_xrefs":["PMID:22977071","ISBN:0387520546","PMID:29559496","PMID:28779329"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"asexual reproduction","secondary_identifiers":["Wikipedia:Asexual_reproduction"],"synonyms":[{"name":"parthenogenesis","type":"related"}],"termid":"GO:0019954"}


id: SO:0001570
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant whereby a new splice site is created due to the activation of a new acceptor.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cryptic_splice_site_variant","termid":"SO:0001569"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic_splice_acceptor","synonyms":[{"name":"cryptic splice acceptor","type":"exact"}],"termid":"SO:0001570"}


id: GO:0001208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of a H2A-H2B histone dimer from a nucleosome within chromatin.","definition_xrefs":["PMID:17496903","PMID:21807128","PMID:15525516","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A-H2B dimer displacement (obsolete GO:0001208)","termid":"GO:0001208"}


id: PBO:0031699
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_nuclear_fusion_during_mating","termid":"PBO:0031699"}


id: PBO:0045381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPP3 pseudogene 2","termid":"PBO:0045381"}


id: PBO:0003988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome-c reductase complex subunit 5","termid":"PBO:0003988"}


id: GO:0018590
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: methylsilanetriol + O2 + 2 H+ + 2 e- = H2O + hydroxymethylsilanetriol.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete methylsilanetriol hydroxylase activity (obsolete GO:0018590)","termid":"GO:0018590"}


id: PBO:0066235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 43","termid":"PBO:0066235"}


id: PATO:0000646
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphological quality inhering in a bearer by virtue of the bearer's being distorted during formation.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deformed","termid":"PATO:0001617"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malformed","synonyms":[{"name":"malformation","type":"narrow"}],"termid":"PATO:0000646"}


id: GO:0052762
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gellan = n beta-D-4-deoxy-delta4,5-GlcAp-(1->4)-beta-D-Glcp-(1->4)-alpha-L-Rhap-(1->3)-beta-D-Glcp. This reaction is the eliminative cleavage of beta-D-glucopyranosyl-(1->4)-beta-D-glucopyranosyluronate bonds of gellan backbone, releasing tetrasaccharides containing a 4-deoxy-4,5-unsaturated D-glucopyranosyluronic acid at the non-reducing end; in the product, the abbreviations are D-glucose (Glc), D-glucuronic acid (GlcA), and L-rhamnose (Rha).","definition_xrefs":["GOC:mengo_curators","MetaCyc:RXN-12269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"gellan lyase activity","secondary_identifiers":["EC:4.2.2.25"],"termid":"GO:0052762"}


id: PBO:0068493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 77, pseudogene","termid":"PBO:0068493"}


id: GO:0038131
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a neuregulin, a member of the EGF family of growth factors, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["PMID:20672328","PMID:16460914","GOC:bf","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"neuregulin receptor activity","synonyms":[{"name":"NRG receptor activity","type":"exact"},{"name":"NRG1 receptor activity","type":"narrow"},{"name":"NRG2 receptor activity","type":"narrow"}],"termid":"GO:0038131"}


id: GO:0001179
data:
  {"annotated_genes":["SJAG_00202"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78643],"is_not":false,"summary":null,"term":"GO:0001179"}]},"cv_name":"molecular_function","definition":"Binding to an RNA polymerase I transcription factor, a protein required to initiate or regulate transcription by RNA polymerase I.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"general transcription initiation factor binding","termid":"GO:0140296"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00202":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"RNA polymerase I general transcription initiation factor binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"RNA polymerase I transcription factor binding","type":"broad"}],"termid":"GO:0001179","terms_by_termid":{"GO:0001179":null}}


id: SO:0002321
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A stop_gained (SO:0001587) variant that is degraded by nonsense-mediated decay (NMD).","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stop_gained","termid":"SO:0001587"},{"relation_name":"is_a","term_name":"NMD_triggering_variant","termid":"SO:0002319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stop_gained_NMD_triggering","synonyms":[{"name":"stop gained variant-nonsense-mediated decay triggering","type":"exact"},{"name":"stop gained-NMD triggering","type":"exact"}],"termid":"SO:0002321"}


id: PBO:0060700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDUFA4 mitochondrial complex associated like 2","termid":"PBO:0060700"}


id: GO:0106230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a propionyl group from a residue in a peptide or protein.","definition_xrefs":["PMID:30026585","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deacylation","termid":"GO:0035601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein depropionylation","termid":"GO:0106230"}


id: PBO:0073433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3b subunit 3","termid":"PBO:0073433"}


id: PBO:0088943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PhoD-like superfamily","termid":"PBO:0088943"}


id: PBO:0027485
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondria_present_in_decreased_numbers_during_G0","termid":"PBO:0027485"}


id: PBO:0089077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L6","termid":"PBO:0089077"}


id: PBO:0042535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK5 regulatory subunit associated protein 2","termid":"PBO:0042535"}


id: PBO:0111533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, implicated in rRNA processing","termid":"PBO:0111533"}


id: PBO:0061776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otoconin 90","termid":"PBO:0061776"}


id: PBO:0075021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-32","termid":"PBO:0075021"}


id: GO:0021633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the optic nerve. This process pertains to the physical shaping of a rudimentary structure. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain.","definition_xrefs":["GOC:cls","GOC:jid","ISBN:0838580343","GO_REF:0000021","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve structural organization","termid":"GO:0021604"},{"relation_name":"part_of","term_name":"optic nerve morphogenesis","termid":"GO:0021631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optic nerve structural organization","synonyms":[{"name":"CN II structural organization","type":"related"},{"name":"optic nerve structural organisation","type":"exact"}],"termid":"GO:0021633"}


id: GO:0032278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of a gonadotropin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gonadotropin secretion","termid":"GO:0032276"},{"relation_name":"is_a","term_name":"positive regulation of hormone secretion","termid":"GO:0046887"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"gonadotropin secretion","termid":"GO:0032274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of gonadotropin secretion","synonyms":[{"name":"activation of gonadotropin secretion","type":"narrow"},{"name":"positive regulation of gonadotrophin secretion","type":"exact"},{"name":"stimulation of gonadotropin secretion","type":"narrow"},{"name":"up regulation of gonadotropin secretion","type":"exact"},{"name":"up-regulation of gonadotropin secretion","type":"exact"},{"name":"upregulation of gonadotropin secretion","type":"exact"}],"termid":"GO:0032278"}


id: PBO:0051500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin superfamily member 23","termid":"PBO:0051500"}


id: GO:0061186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate, or extent of heterochromatin formation at silent mating-type cassette.","definition_xrefs":["PMID:10388812","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of heterochromatin formation","termid":"GO:0031452"},{"relation_name":"is_a","term_name":"regulation of silent mating-type cassette heterochromatin formation","termid":"GO:0090054"},{"relation_name":"negatively_regulates","term_name":"silent mating-type cassette heterochromatin formation","termid":"GO:0030466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of silent mating-type cassette heterochromatin formation","synonyms":[{"name":"negative regulation of chromatin silencing at silent mating-type cassette","type":"exact"},{"name":"negative regulation of silent mating-type cassette heterochromatin assembly","type":"exact"}],"termid":"GO:0061186"}


id: PBO:0055320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2748","termid":"PBO:0055320"}


id: GO:0051261
data:
  {"annotated_genes":["SJAG_05296","SJAG_01297","SJAG_01224","SJAG_01993","SJAG_02700","SJAG_02336","SJAG_03025","SJAG_01894","SJAG_02624","SJAG_04312","SJAG_00723","SJAG_04841","SJAG_03380","SJAG_00279"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96979,88586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030042"},{"annotations":[93351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060172"},{"annotations":[94955,110384,84326,88371],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0051016"},{"annotations":[86359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072318"},{"annotations":[99959,104309,94683,85687,114209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007019"},{"annotations":[104318,99967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070462"},{"annotations":[97908],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0031117"}]},"cv_name":"biological_process","definition":"The process in which protein polymers, compounds composed of a large number of component monomers, are broken down. Depolymerization occurs by the successive removal of monomers from an existing poly- or oligomeric protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00723":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02336":null,"SJAG_02624":null,"SJAG_02700":null,"SJAG_03025":null,"SJAG_03380":null,"SJAG_04312":null,"SJAG_04841":null,"SJAG_05296":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein depolymerization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein polymer breakdown","type":"exact"},{"name":"protein polymer catabolic process","type":"exact"},{"name":"protein polymer catabolism","type":"exact"},{"name":"protein polymer degradation","type":"exact"}],"termid":"GO:0051261","terms_by_termid":{"GO:0007019":null,"GO:0030042":null,"GO:0031117":null,"GO:0051016":null,"GO:0060172":null,"GO:0070462":null,"GO:0072318":null}}


id: GO:0048052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire the specialized features of R1 and R6 photoreceptors. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor cell differentiation","termid":"GO:0001751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"R1/R6 cell differentiation","termid":"GO:0048052"}


id: GO:1903070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of ER-associated ubiquitin-dependent protein catabolic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:17872946","GOC:rph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of ER-associated ubiquitin-dependent protein catabolic process (obsolete GO:1903070)","termid":"GO:1903070"}


id: SO:0000300
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A location where a gene is rearranged due to recombination during mitosis or meiosis.","direct_ancestors":[{"relation_name":"is_a","term_name":"specific_recombination_site","termid":"SO:0000299"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination_feature_of_rearranged_gene","synonyms":[{"name":"recombination feature of rearranged gene","type":"exact"}],"termid":"SO:0000300"}


id: PBO:0054639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2044","termid":"PBO:0054639"}


id: FYPO:0002452
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell contains one or more septa, has abnormal morphology (i.e. size, shape, or structure) and is inviable.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"has_part","term_name":"septated vegetative cell","termid":"FYPO:0002342"},{"relation_name":"is_a","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"},{"relation_name":"is_a","term_name":"septated vegetative cell","termid":"FYPO:0002342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001320","FYPO:0001985","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"inviable septated vegetative cell with abnormal cell morphology","synonyms":[{"name":"lethal; septated vegetative cell with abnormal cell morphology","type":"exact"}],"termid":"FYPO:0002452"}


id: GO:0004990
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with oxytocin to initiate a change in cell activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"oxytocin receptor activity","termid":"GO:0004990"}


id: PBO:0067204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 269, pseudogene","termid":"PBO:0067204"}


id: PBO:0004172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair endonuclease Swi10","termid":"PBO:0004172"}


id: PomGeneEx:0000007
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneEx","definition":"A gene expression qualifier that indicates that an RNA or protein is present at the same level or produced at a the same rate under two or more sets of conditions or over a time course.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression qualifier","termid":"PomGeneEx:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"constant","synonyms":[{"name":"gene expression constant","type":"exact"},{"name":"gene product level constant","type":"exact"}],"termid":"PomGeneEx:0000007"}


id: PBO:0044539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DAN domain BMP antagonist family member 5","termid":"PBO:0044539"}


id: PBO:0071534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35","termid":"PBO:0071534"}


id: PBO:0031172
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_catastrophe_with_cut,_elongated_cell","termid":"PBO:0031172"}


id: GO:0035381
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when ATP has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand-gated channel activity","termid":"GO:0022834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ATP-gated ion channel activity","termid":"GO:0035381"}


id: SO:1000072
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence_variant_effect that changes the splice donor sequence.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000072 sequence_variant_affecting_splice_donor (obsolete SO:1000072)","synonyms":[{"name":"mutation affecting splice donor","type":"related"},{"name":"sequence variant affecting splice donor","type":"related"},{"name":"splice donor mutation","type":"exact"}],"termid":"SO:1000072"}


id: PBO:0079511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin reductase 2","termid":"PBO:0079511"}


id: SO:0000680
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A start codon that is not the usual AUG sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"start_codon","termid":"SO:0000318"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_canonical_start_codon","synonyms":[{"name":"non ATG start codon","type":"exact"},{"name":"non canonical start codon","type":"exact"},{"name":"non-canonical start codon","type":"exact"}],"termid":"SO:0000680"}


id: PBO:0090862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid transmembrane transporter Fnx1","termid":"PBO:0090862"}


id: PBO:0054354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1747","termid":"PBO:0054354"}


id: GO:0010065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the primary meristem over time, from formation to the mature structure, as it occurs during plant embryogenesis. The primary meristem tissue is the protoderm, ground meristem and procambium.","definition_xrefs":["ISBN:0471245208","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic meristem development","termid":"GO:0048508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary meristem tissue development","synonyms":[{"name":"primary meristem histogenesis","type":"exact"}],"termid":"GO:0010065"}


id: GO:0001110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that mediates the transition from the initiation to the elongation phases of transcription by RNA polymerase III, generally including a conformational change from the initiation conformation to the elongation conformation. Promoter clearance often involves breaking contact with transcription factors involved only in the initiation phase.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter clearance during DNA-templated transcription","termid":"GO:0001109"},{"relation_name":"part_of","term_name":"transcription by RNA polymerase III","termid":"GO:0006383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"RNA polymerase III promoter clearance","synonyms":[{"name":"promoter clearance from RNA polymerase III promoter","type":"exact"}],"termid":"GO:0001110"}


id: PBO:0044203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin L pseudogene 1","termid":"PBO:0044203"}


id: PBO:0089667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CP2 mannose-ethanolamine phosphotransferase GPI anchor biosynthesis protein Gpi7","termid":"PBO:0089667"}


id: PBO:0054164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1533","termid":"PBO:0054164"}


id: PBO:0079139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 2","termid":"PBO:0079139"}


id: PBO:0054481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1881","termid":"PBO:0054481"}


id: FYPO:0007629
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a normal proportion of cells in the population remains viable during G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"normal viability during G0","synonyms":[{"name":"maintains viability in G0","type":"exact"},{"name":"normal G0 maintenance","type":"exact"},{"name":"normal cell population viability during G0","type":"exact"},{"name":"normal viability during cell quiescence","type":"exact"},{"name":"normal viability during quiescence","type":"exact"},{"name":"normal viability in G0","type":"exact"}],"termid":"FYPO:0007629"}


id: PBO:0042744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein S","termid":"PBO:0042744"}


id: PBO:0090145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pex16 family peroxisome import protein Pex16","termid":"PBO:0090145"}


id: PBO:0055488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2922","termid":"PBO:0055488"}


id: PBO:0027146
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_farnesyltranstransferase_activity","termid":"PBO:0027146"}


id: PATO:0000135
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000135 relative_angle (obsolete PATO:0000135)","termid":"PATO:0000135"}


id: PBO:0017569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol cholinephosphotransferase/ diacylglycerol ethanolaminesphotransferase Ept1 (predicted)","termid":"PBO:0017569"}


id: FYPO:0006782
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a protein measured in a complex that is a precursor of the large ribosomal subunit is lower than normal.","definition_xrefs":["PomBase:mah","PMID:27667686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"},{"relation_name":"is_a","term_name":"abnormal protein complex composition","termid":"FYPO:0005003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein level in large ribosomal subunit precursor","synonyms":[{"name":"decreased large ribosomal subunit precursor complex protein level during vegetative growth","type":"exact"},{"name":"decreased protein level in large ribosomal subunit precursor during mitotic cell cycle","type":"related"},{"name":"decreased protein level in large ribosomal subunit precursor during vegetative growth","type":"exact"},{"name":"decreased protein level in preribosome, large subunit precursor","type":"exact"},{"name":"reduced protein level in large ribosomal subunit precursor","type":"exact"}],"termid":"FYPO:0006782"}


id: FYPO:0002560
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the actomyosin contractile ring is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis","termid":"FYPO:0000032"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex during vegetative growth","termid":"FYPO:0000928"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell division site","termid":"FYPO:0001401"},{"relation_name":"is_a","term_name":"abnormal protein localization to actin cytoskeleton during vegetative growth","termid":"FYPO:0007578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0000631","FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to actomyosin contractile ring","synonyms":[{"name":"abnormal protein localisation to actomyosin contractile ring","type":"exact"},{"name":"abnormal protein localization to actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"abnormal protein localization to actomyosin contractile ring involved in mitotic cytokinesis","type":"exact"},{"name":"abnormal protein localization to contractile ring","type":"exact"},{"name":"abnormal protein localization to cytokinetic contractile ring","type":"exact"},{"name":"abnormal protein localization to mitotic contractile ring","type":"exact"},{"name":"abnormal protein recruitment to actomyosin contractile ring","type":"related"}],"termid":"FYPO:0002560"}


id: GO:0034972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of a methyl group to arginine at position 26 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-R26 methylation (obsolete GO:0034972)","synonyms":[{"name":"histone H3 R26 methylation","type":"exact"},{"name":"histone H3R26me","type":"exact"},{"name":"histone lysine H3 R26 methylation","type":"exact"}],"termid":"GO:0034972"}


id: GO:0051898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of phosphatidylinositol 3-kinase/protein kinase B signal transduction.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction","termid":"GO:0051896"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"phosphatidylinositol 3-kinase/protein kinase B signal transduction","termid":"GO:0043491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction","synonyms":[{"name":"down regulation of protein kinase B signaling cascade","type":"related"},{"name":"down-regulation of protein kinase B signaling cascade","type":"related"},{"name":"downregulation of protein kinase B signaling cascade","type":"related"},{"name":"inhibition of protein kinase B signaling cascade","type":"narrow"},{"name":"negative regulation of AKT signaling cascade","type":"related"},{"name":"negative regulation of AKT signalling cascade","type":"related"},{"name":"negative regulation of PI3K-PKB/Akt pathway","type":"exact"},{"name":"negative regulation of PI3K/Akt signal transduction","type":"exact"},{"name":"negative regulation of PI3K/PKB signal transduction","type":"exact"},{"name":"negative regulation of PKB signaling cascade","type":"related"},{"name":"negative regulation of PKB signalling cascade","type":"related"},{"name":"negative regulation of phosphatidylinositol 3-kinase signaling/protein kinase B signal transduction","type":"exact"},{"name":"negative regulation of protein kinase B signaling","type":"related"},{"name":"negative regulation of protein kinase B signaling cascade","type":"related"},{"name":"negative regulation of protein kinase B signalling cascade","type":"related"}],"termid":"GO:0051898"}


id: PBO:0074328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4","termid":"PBO:0074328"}


id: PBO:0050826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxypyruvate isomerase (putative)","termid":"PBO:0050826"}


id: PBO:0029762
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_vacuolated_vegetative_cell","termid":"PBO:0029762"}


id: GO:0030913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of the junction between an axon and the glial cell that forms the myelin sheath. Paranodal junctions form at each paranode, i.e. at the ends of the unmyelinated nodes of Ranvier.","definition_xrefs":["PMID:14715942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction assembly","termid":"GO:0007043"},{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"part_of","term_name":"myelin assembly","termid":"GO:0032288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"paranodal junction assembly","synonyms":[{"name":"paranodal axoglial junction formation","type":"exact"},{"name":"paranodal junction biosynthesis","type":"exact"},{"name":"paranodal junction formation","type":"exact"}],"termid":"GO:0030913"}


id: GO:0061379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the inferior colliculus over time, from its formation to the mature structure. The inferior colliculus (IC) (Latin, lower hill) is the principal midbrain nucleus of the auditory pathway and receives input from several more peripheral brainstem nuclei in the auditory pathway, as well as inputs from the auditory cortex. The inferior colliculus has three subdivisions: the central nucleus (CIC), a dorsal cortex (DCIC) by which it is surrounded, and an external cortex (ICX) which is located laterally.","definition_xrefs":["GOC:yaf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"corpora quadrigemina development","termid":"GO:0061378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inferior colliculus development","termid":"GO:0061379"}


id: GO:0047696
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + beta-adrenergic receptor = ADP + phospho-beta-adrenergic receptor.","definition_xrefs":["MetaCyc:BETA-ADRENERGIC-RECEPTOR-KINASE-RXN","EC:2.7.11.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0003824","GO:0016740","GO:0004672","GO:0016301"],"is_obsolete":false,"name":"beta-adrenergic receptor kinase activity","secondary_identifiers":["Reactome:R-HSA-8866268","RHEA:19429","Reactome:R-HSA-8851797"],"synonyms":[{"name":"GRK2","type":"related"},{"name":"ADRBK1","type":"related"},{"name":"ATP:beta-adrenergic-receptor phosphotransferase activity","type":"broad"},{"name":"BARK1","type":"related"},{"name":"GRK3","type":"related"},{"name":"STK15","type":"related"},{"name":"[b-adrenergic-receptor] kinase activity","type":"related"},{"name":"adrenergic receptor kinase activity","type":"broad"},{"name":"beta-AR kinase activity","type":"related"},{"name":"beta-ARK","type":"related"},{"name":"beta-ARK 1","type":"related"},{"name":"beta-ARK 2","type":"related"},{"name":"beta-adrenergic receptor-specific kinase activity","type":"related"},{"name":"beta-adrenergic-receptor kinase (phosphorylating) activity","type":"related"},{"name":"beta-adrenergic-receptor kinase activity","type":"related"},{"name":"beta-adrenoceptor kinase 1 activity","type":"narrow"},{"name":"beta-adrenoceptor kinase 2 activity","type":"narrow"},{"name":"beta-adrenoceptor kinase activity","type":"related"},{"name":"beta-receptor kinase activity","type":"related"},{"name":"beta2ARK","type":"related"},{"name":"betaARK1","type":"related"}],"termid":"GO:0047696"}


id: PBO:0031663
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_modification","termid":"PBO:0031663"}


id: GO:0060522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signaling at short range from mesenchymal cells to cells of an epithelium that results in a developmental change in the epithelial cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inductive cell-cell signaling","termid":"GO:0031129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inductive mesenchymal to epithelial cell signaling","synonyms":[{"name":"inductive mesenchymal to epithelial cell signalling","type":"exact"}],"termid":"GO:0060522"}


id: PBO:0043957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin gamma B","termid":"PBO:0043957"}


id: PBO:0000248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase (predicted)","termid":"PBO:0000248"}


id: PBO:0054388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1784","termid":"PBO:0054388"}


id: PBO:0069369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 629, pseudogene","termid":"PBO:0069369"}


id: GO:0046262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of nitrotoluene, any methylbenzene molecule with NO2 group(s) attached.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete nitrotoluene biosynthetic process (obsolete GO:0046262)","synonyms":[{"name":"nitrotoluene anabolism","type":"exact"},{"name":"nitrotoluene biosynthesis","type":"exact"},{"name":"nitrotoluene biosynthetic process","type":"exact"},{"name":"nitrotoluene formation","type":"exact"},{"name":"nitrotoluene synthesis","type":"exact"}],"termid":"GO:0046262"}


id: PBO:0012257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteiasome complex subunit Ecm29","termid":"PBO:0012257"}


id: GO:0016072
data:
  {"annotated_genes":["SJAG_02427","SJAG_00945","SJAG_03234","SJAG_01153","SJAG_04492","SJAG_02879","SJAG_02020","SJAG_04582","SJAG_01272","SJAG_02372","SJAG_02382","SJAG_02377","SJAG_04224","SJAG_00722","SJAG_02287","SJAG_02256","SJAG_02681","SJAG_03846","SJAG_01907","SJAG_01476","SJAG_03422","SJAG_04108","SJAG_00572","SJAG_04321","SJAG_01169","SJAG_04081","SJAG_03077","SJAG_04754","SJAG_03413","SJAG_04261","SJAG_04818","SJAG_04908","SJAG_05223","SJAG_00749","SJAG_03276","SJAG_04524","SJAG_02547","SJAG_01420","SJAG_02101","SJAG_03730","SJAG_04519","SJAG_03125","SJAG_01347","SJAG_02156","SJAG_00253","SJAG_01562","SJAG_03617","SJAG_03572","SJAG_00323","SJAG_04974","SJAG_03773","SJAG_00294","SJAG_03466","SJAG_00841","SJAG_05253","SJAG_00813","SJAG_01821","SJAG_03539","SJAG_02374","SJAG_01604","SJAG_04252","SJAG_04424","SJAG_00752","SJAG_01958","SJAG_03956","SJAG_02821","SJAG_04062","SJAG_03507","SJAG_02662","SJAG_00245","SJAG_04890","SJAG_00562","SJAG_03144","SJAG_04069","SJAG_03425","SJAG_05018","SJAG_03341","SJAG_00410","SJAG_03332","SJAG_03877","SJAG_00854","SJAG_06613","SJAG_01609","SJAG_03458","SJAG_01172","SJAG_04433","SJAG_05190","SJAG_03479","SJAG_00311","SJAG_03654","SJAG_01323","SJAG_02358","SJAG_04838","SJAG_02499","SJAG_03952","SJAG_05276","SJAG_03796","SJAG_02553","SJAG_02300","SJAG_03954","SJAG_03984","SJAG_04006","SJAG_02275","SJAG_00083","SJAG_00798","SJAG_00689","SJAG_00950","SJAG_02046","SJAG_02371","SJAG_02747","SJAG_01623","SJAG_02702","SJAG_03016","SJAG_01182","SJAG_04527","SJAG_01313","SJAG_02644","SJAG_01877","SJAG_00897","SJAG_01765","SJAG_03789","SJAG_02417","SJAG_00583","SJAG_01764","SJAG_00772","SJAG_04004","SJAG_01650","SJAG_00879","SJAG_01698","SJAG_00139","SJAG_00259","SJAG_04330","SJAG_00344","SJAG_02350","SJAG_00882","SJAG_04766","SJAG_00468","SJAG_03289","SJAG_02871","SJAG_01234","SJAG_02508","SJAG_04084","SJAG_01250","SJAG_02530","SJAG_00202","SJAG_01948","SJAG_03578","SJAG_01818","SJAG_02608","SJAG_00597","SJAG_04339","SJAG_00566","SJAG_04979","SJAG_02813","SJAG_04767","SJAG_02024","SJAG_02281","SJAG_00692","SJAG_00965","SJAG_04283","SJAG_04824","SJAG_00657","SJAG_00949","SJAG_02585","SJAG_03252","SJAG_03383","SJAG_04029","SJAG_00616","SJAG_00955","SJAG_00401","SJAG_04746","SJAG_01056","SJAG_04106","SJAG_03012","SJAG_01551","SJAG_03410","SJAG_02911","SJAG_00986","SJAG_03857","SJAG_03179","SJAG_04033","SJAG_03872","SJAG_01674","SJAG_01581","SJAG_04900","SJAG_03156","SJAG_03713","SJAG_02250","SJAG_02952","SJAG_02025","SJAG_05186","SJAG_01128","SJAG_02653","SJAG_04153","SJAG_02815","SJAG_01431","SJAG_04916","SJAG_04650","SJAG_04174","SJAG_02993","SJAG_02830","SJAG_04669","SJAG_05187","SJAG_03728","SJAG_00537","SJAG_00538","SJAG_01521","SJAG_00838","SJAG_02070","SJAG_03028","SJAG_03569","SJAG_04687","SJAG_02749","SJAG_01191","SJAG_04264","SJAG_00744","SJAG_01444","SJAG_03551","SJAG_00081","SJAG_02829","SJAG_03755","SJAG_03008","SJAG_01618","SJAG_01369","SJAG_00731","SJAG_05029","SJAG_03745","SJAG_04369","SJAG_00943","SJAG_04289","SJAG_05331","SJAG_01811","SJAG_16455"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84892],"is_not":false,"summary":null,"term":"GO:0016072"},{"annotations":[105185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042791"},{"annotations":[87742,100178,91014,114620],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0000448"},{"annotations":[95875,111263,103673],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0000480"},{"annotations":[89466,104001,90765,109551,101610,100605,100822,99187,101702,103674,95549,111462,92855,101703,92561,95876,105056,111374,114654],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0000447"},{"annotations":[90385,84418,104755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000479"},{"annotations":[101611],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0000461"},{"annotations":[103675,105057,111264,95877],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0000472"},{"annotations":[88322,102272,87259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000455"},{"annotations":[93310,104542,100455,111949,111509,91973,88288,94998,114359,86043,102507,103504,101302,98135,89119],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0000467"},{"annotations":[103505],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0000465"},{"annotations":[88858,112234,97094,88951,114961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000460"},{"annotations":[94041,85693,110908,102046,106866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000466"},{"annotations":[85601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000481"},{"annotations":[112235,88952,109677,114962,88859,103927,92279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000470"},{"annotations":[75192,106867,94042,88436,88145,111385,94009,110909,96792,102047,113716,76271,85907,113737,85694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000463"},{"annotations":[103418,84758,108055,106024,90813,93930,87367,91789,94583,109603,88092,100633,85098,92280,94847,88323,89337,96521,92920,96651,97739,97981,91888,106151,112508,89752,106624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030490"},{"annotations":[110786,88682,101727,105773,93104,112823,111818,104756,97464,90386,83897,87282,103156,96816,84389,91740,103017,102261,106440,94400,95219,95220,96270,101726,91739,102022,97627,95257,85302,94401,107838,105148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000462"},{"annotations":[114360,100456,103506,111950,93556,93311,103597,88290,102508,112098,89120,101303,98136,91974,111510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070651"},{"annotations":[107994,105203,89220,105788,91465,112523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042790"},{"annotations":[88093,92281],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:2000234"},{"annotations":[90957,74384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070476"},{"annotations":[91459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000967"},{"annotations":[88660],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:1904812"},{"annotations":[91681,112274,87372,91250,109678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070475"},{"annotations":[86375,109333,109882,93800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016075"},{"annotations":[63707,85695,63153,94917,59264,65146,104436,105149,94469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031167"},{"annotations":[95675,102552,103937,111132,114621,107027,69758,92319,108737,109644,111775,101451,86852,86879,84853,87422,113255,88414,83819,86621,108962,87142,84893,104658,87727,109135,109972,89418,86620,108982,92177,99005,93178,110638,84253,102967,103489,96293,112438,100179,93370,99714,104506,72563,85265,98584,100573,103255,106869,99414,108499,99738,100896,101325,110881,101452,108202,87736,91707,98234,103159,108138,96967,87565,107114,100970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006364"},{"annotations":[97221,91414,86077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031118"},{"annotations":[94849,107407,106254,104147,90188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000452"},{"annotations":[102333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000454"},{"annotations":[109203,98746,83753,83754,91806,86443,88080,109578,106739,85624,105830,101839,109579,109865,91273,110280,111594,89967,99404,100926],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006362"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving rRNA, ribosomal RNA, a structural constituent of ribosomes.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":233,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00083":null,"SJAG_00139":null,"SJAG_00202":null,"SJAG_00245":null,"SJAG_00253":null,"SJAG_00259":null,"SJAG_00294":null,"SJAG_00311":null,"SJAG_00323":null,"SJAG_00344":null,"SJAG_00401":null,"SJAG_00410":null,"SJAG_00468":null,"SJAG_00537":null,"SJAG_00538":null,"SJAG_00562":null,"SJAG_00566":null,"SJAG_00572":null,"SJAG_00583":null,"SJAG_00597":null,"SJAG_00616":null,"SJAG_00657":null,"SJAG_00689":null,"SJAG_00692":null,"SJAG_00722":null,"SJAG_00731":null,"SJAG_00744":null,"SJAG_00749":null,"SJAG_00752":null,"SJAG_00772":null,"SJAG_00798":null,"SJAG_00813":null,"SJAG_00838":null,"SJAG_00841":null,"SJAG_00854":null,"SJAG_00879":null,"SJAG_00882":null,"SJAG_00897":null,"SJAG_00943":null,"SJAG_00945":null,"SJAG_00949":null,"SJAG_00950":null,"SJAG_00955":null,"SJAG_00965":null,"SJAG_00986":null,"SJAG_01056":null,"SJAG_01128":null,"SJAG_01153":null,"SJAG_01169":null,"SJAG_01172":null,"SJAG_01182":null,"SJAG_01191":null,"SJAG_01234":null,"SJAG_01250":null,"SJAG_01272":null,"SJAG_01313":null,"SJAG_01323":null,"SJAG_01347":null,"SJAG_01369":null,"SJAG_01420":null,"SJAG_01431":null,"SJAG_01444":null,"SJAG_01476":null,"SJAG_01521":null,"SJAG_01551":null,"SJAG_01562":null,"SJAG_01581":null,"SJAG_01604":null,"SJAG_01609":null,"SJAG_01618":null,"SJAG_01623":null,"SJAG_01650":null,"SJAG_01674":null,"SJAG_01698":null,"SJAG_01764":null,"SJAG_01765":null,"SJAG_01811":null,"SJAG_01818":null,"SJAG_01821":null,"SJAG_01877":null,"SJAG_01907":null,"SJAG_01948":null,"SJAG_01958":null,"SJAG_02020":null,"SJAG_02024":null,"SJAG_02025":null,"SJAG_02046":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02156":null,"SJAG_02250":null,"SJAG_02256":null,"SJAG_02275":null,"SJAG_02281":null,"SJAG_02287":null,"SJAG_02300":null,"SJAG_02350":null,"SJAG_02358":null,"SJAG_02371":null,"SJAG_02372":null,"SJAG_02374":null,"SJAG_02377":null,"SJAG_02382":null,"SJAG_02417":null,"SJAG_02427":null,"SJAG_02499":null,"SJAG_02508":null,"SJAG_02530":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_02585":null,"SJAG_02608":null,"SJAG_02644":null,"SJAG_02653":null,"SJAG_02662":null,"SJAG_02681":null,"SJAG_02702":null,"SJAG_02747":null,"SJAG_02749":null,"SJAG_02813":null,"SJAG_02815":null,"SJAG_02821":null,"SJAG_02829":null,"SJAG_02830":null,"SJAG_02871":null,"SJAG_02879":null,"SJAG_02911":null,"SJAG_02952":null,"SJAG_02993":null,"SJAG_03008":null,"SJAG_03012":null,"SJAG_03016":null,"SJAG_03028":null,"SJAG_03077":null,"SJAG_03125":null,"SJAG_03144":null,"SJAG_03156":null,"SJAG_03179":null,"SJAG_03234":null,"SJAG_03252":null,"SJAG_03276":null,"SJAG_03289":null,"SJAG_03332":null,"SJAG_03341":null,"SJAG_03383":null,"SJAG_03410":null,"SJAG_03413":null,"SJAG_03422":null,"SJAG_03425":null,"SJAG_03458":null,"SJAG_03466":null,"SJAG_03479":null,"SJAG_03507":null,"SJAG_03539":null,"SJAG_03551":null,"SJAG_03569":null,"SJAG_03572":null,"SJAG_03578":null,"SJAG_03617":null,"SJAG_03654":null,"SJAG_03713":null,"SJAG_03728":null,"SJAG_03730":null,"SJAG_03745":null,"SJAG_03755":null,"SJAG_03773":null,"SJAG_03789":null,"SJAG_03796":null,"SJAG_03846":null,"SJAG_03857":null,"SJAG_03872":null,"SJAG_03877":null,"SJAG_03952":null,"SJAG_03954":null,"SJAG_03956":null,"SJAG_03984":null,"SJAG_04004":null,"SJAG_04006":null,"SJAG_04029":null,"SJAG_04033":null,"SJAG_04062":null,"SJAG_04069":null,"SJAG_04081":null,"SJAG_04084":null,"SJAG_04106":null,"SJAG_04108":null,"SJAG_04153":null,"SJAG_04174":null,"SJAG_04224":null,"SJAG_04252":null,"SJAG_04261":null,"SJAG_04264":null,"SJAG_04283":null,"SJAG_04289":null,"SJAG_04321":null,"SJAG_04330":null,"SJAG_04339":null,"SJAG_04369":null,"SJAG_04424":null,"SJAG_04433":null,"SJAG_04492":null,"SJAG_04519":null,"SJAG_04524":null,"SJAG_04527":null,"SJAG_04582":null,"SJAG_04650":null,"SJAG_04669":null,"SJAG_04687":null,"SJAG_04746":null,"SJAG_04754":null,"SJAG_04766":null,"SJAG_04767":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_04838":null,"SJAG_04890":null,"SJAG_04900":null,"SJAG_04908":null,"SJAG_04916":null,"SJAG_04974":null,"SJAG_04979":null,"SJAG_05018":null,"SJAG_05029":null,"SJAG_05186":null,"SJAG_05187":null,"SJAG_05190":null,"SJAG_05223":null,"SJAG_05253":null,"SJAG_05276":null,"SJAG_05331":null,"SJAG_06613":null,"SJAG_16455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rRNA metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"rRNA metabolism","type":"exact"}],"termid":"GO:0016072","terms_by_termid":{"GO:0000447":null,"GO:0000448":null,"GO:0000452":null,"GO:0000454":null,"GO:0000455":null,"GO:0000460":null,"GO:0000461":null,"GO:0000462":null,"GO:0000463":null,"GO:0000465":null,"GO:0000466":null,"GO:0000467":null,"GO:0000470":null,"GO:0000472":null,"GO:0000479":null,"GO:0000480":null,"GO:0000481":null,"GO:0000967":null,"GO:0006362":null,"GO:0006364":null,"GO:0016072":null,"GO:0016075":null,"GO:0030490":null,"GO:0031118":null,"GO:0031167":null,"GO:0042790":null,"GO:0042791":null,"GO:0070475":null,"GO:0070476":null,"GO:0070651":null,"GO:1904812":null,"GO:2000234":null}}


id: MOD:00651
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino group with a palmitoylamino group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"palmitoylated residue","termid":"MOD:00440"},{"relation_name":"is_a","term_name":"N-acylated residue","termid":"MOD:00670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-palmitoylated residue","synonyms":[{"name":"N-hexadecanoylated residue","type":"exact"},{"name":"NPamRes","type":"exact"}],"termid":"MOD:00651"}


id: PBO:0062540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily G member 9","termid":"PBO:0062540"}


id: PBO:0049168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRB2 related adaptor protein 2","termid":"PBO:0049168"}


id: PBO:0090003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces japonicus specific serine/threonine rich protein","termid":"PBO:0090003"}


id: RO:0002002
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between a material entity and a 2D immaterial entity (the boundary), in which the boundary delimits the material entity","direct_ancestors":[{"relation_name":"is_a","term_name":"mereotopologically_related_to","termid":"RO:0002323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_2D_boundary","termid":"RO:0002002"}


id: PBO:0062171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 14","termid":"PBO:0062171"}


id: PBO:0085231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAS domain-containing serine/threonine protein kinase; coordinately regulates protein synthesis and carbohydrate metabolism and storage in response to a unknown metabolite that reflects nutritional status; PSK1 has a paralog, PSK2, that arose from the whole genome duplication","termid":"PBO:0085231"}


id: GO:1901722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell proliferation involved in kidney development.","definition_xrefs":["PMID:18182616","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"cell proliferation involved in kidney development","termid":"GO:0072111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell proliferation involved in kidney development","termid":"GO:1901722"}


id: PBO:0005613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med19/Rox3","termid":"PBO:0005613"}


id: PBO:0028022
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_DNA_polymerase_activity","termid":"PBO:0028022"}


id: PBO:0069755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1038, pseudogene","termid":"PBO:0069755"}


id: GO:0001729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + ceramide = ADP + ceramide-1-phosphate.","definition_xrefs":["EC:2.7.1.138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid kinase activity","termid":"GO:0001727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"ceramide kinase activity","secondary_identifiers":["RHEA:17929","Reactome:R-HSA-1638845","MetaCyc:CERAMIDE-KINASE-RXN"],"synonyms":[{"name":"ATP:ceramide 1-phosphotransferase activity","type":"related"},{"name":"acylsphingosine kinase activity","type":"related"}],"termid":"GO:0001729"}


id: GO:0052540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of symbiont processes resulting in the thickening of its cell walls, occurring as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of defense-related symbiont cell wall thickening (obsolete GO:0052540)","synonyms":[{"name":"positive regulation by organism of defense-related symbiont cell wall thickening","type":"exact"},{"name":"positive regulation by organism of symbiont defensive cell wall thickening","type":"exact"}],"termid":"GO:0052540"}


id: GO:1904718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of AMPA glutamate receptor clustering.","definition_xrefs":["GOC:hjd","PMID:21558424","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of postsynaptic membrane organization","termid":"GO:1901627"},{"relation_name":"is_a","term_name":"negative regulation of receptor clustering","termid":"GO:1903910"},{"relation_name":"is_a","term_name":"regulation of AMPA glutamate receptor clustering","termid":"GO:1904717"},{"relation_name":"negatively_regulates","term_name":"AMPA glutamate receptor clustering","termid":"GO:0097113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"negative regulation of AMPA glutamate receptor clustering","synonyms":[{"name":"down regulation of AMPA glutamate receptor clustering","type":"exact"},{"name":"down regulation of AMPA receptor clustering","type":"exact"},{"name":"down regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor clustering","type":"exact"},{"name":"down-regulation of AMPA glutamate receptor clustering","type":"exact"},{"name":"down-regulation of AMPA receptor clustering","type":"exact"},{"name":"down-regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor clustering","type":"exact"},{"name":"downregulation of AMPA glutamate receptor clustering","type":"exact"},{"name":"downregulation of AMPA receptor clustering","type":"exact"},{"name":"downregulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor clustering","type":"exact"},{"name":"inhibition of AMPA glutamate receptor clustering","type":"narrow"},{"name":"inhibition of AMPA receptor clustering","type":"narrow"},{"name":"inhibition of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor clustering","type":"narrow"},{"name":"negative regulation of AMPA receptor clustering","type":"exact"},{"name":"negative regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor clustering","type":"exact"}],"termid":"GO:1904718"}


id: PBO:0088071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-specific protease; specifically disassembles unanchored ubiquitin chains; involved in fructose-1,6-bisphosphatase (Fbp1p) degradation; similar to human isopeptidase T","termid":"PBO:0088071"}


id: PBO:0066506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RFX3 divergent transcript","termid":"PBO:0066506"}


id: PBO:0029992
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_thiamine_starvation","termid":"PBO:0029992"}


id: PR:P36579
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- arf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P36579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.18c","synonyms":[{"name":"Spom972h-arf1","type":"exact"}],"termid":"PR:P36579"}


id: GO:1990608
data:
  {"annotated_genes":["SJAG_02332","SJAG_03200","SJAG_05196","SJAG_04558","SJAG_01422","SJAG_01460"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86193,99523],"is_not":false,"summary":null,"term":"GO:1990608"},{"annotations":[107493,98884,96658,86192,99522,108903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140480"}]},"cv_name":"biological_process","definition":"A process in which a mitotic spindle pole body is transported to, or maintained in, a specific cellular location.","definition_xrefs":["PMID:24963130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body localization","termid":"GO:0070631"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01422":null,"SJAG_01460":null,"SJAG_02332":null,"SJAG_03200":null,"SJAG_04558":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"mitotic spindle pole body localization","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0071789","GO:0070632"],"synonyms":[{"name":"spindle pole body docking","type":"narrow"},{"name":"establishment and maintenance of spindle pole body localization","type":"exact"},{"name":"establishment of spindle pole body localisation","type":"narrow"},{"name":"establishment of spindle pole body localization","type":"narrow"},{"name":"mitotic spindle pole body localization to nuclear envelope","type":"narrow"},{"name":"spindle pole body localisation in nuclear envelope","type":"narrow"},{"name":"spindle pole body localization in nuclear envelope","type":"narrow"},{"name":"spindle pole body localization to nuclear envelope","type":"narrow"},{"name":"spindle pole body positioning","type":"narrow"}],"termid":"GO:1990608","terms_by_termid":{"GO:0140480":null,"GO:1990608":null}}


id: FYPO:0004139
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of a specific substance measured in a cell that is subject to nitrogen starvation differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell","termid":"FYPO:0000989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"altered level of substance in cell during nitrogen starvation","synonyms":[{"name":"abnormal level of substance in cell during nitrogen starvation","type":"exact"}],"termid":"FYPO:0004139"}


id: GO:0031864
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an EP1 subtype prostaglandin E2 receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostanoid receptor binding","termid":"GO:0031862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"EP1 subtype prostaglandin E2 receptor binding","synonyms":[{"name":"EP1 subtype prostaglandin E2 receptor ligand","type":"narrow"},{"name":"prostanoid EP1 receptor binding","type":"exact"}],"termid":"GO:0031864"}


id: GO:1901556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a candesartan stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to candesartan","termid":"GO:1901556"}


id: PBO:0030994
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_osmotic_stress","termid":"PBO:0030994"}


id: PBO:0075838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSTR5 antisense RNA 1","termid":"PBO:0075838"}


id: PATO:0000901
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000901 backcross sterile (obsolete PATO:0000901)","synonyms":[{"name":"backcross infertile","type":"related"}],"termid":"PATO:0000901"}


id: PBO:0079850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-80 homolog, NALCN channel complex subunit","termid":"PBO:0079850"}


id: PBO:0071416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 22","termid":"PBO:0071416"}


id: GO:0035531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of chemokine (C-C motif) ligand 6 (CCL6).","definition_xrefs":["GOC:add","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"chemokine (C-C motif) ligand 6 production","termid":"GO:0035530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of chemokine (C-C motif) ligand 6 production","secondary_identifiers":["GO:0035535","GO:0035534"],"synonyms":[{"name":"chemokine (C-C motif) ligand 6 secretion","type":"narrow"},{"name":"regulation of CCL6 production","type":"exact"},{"name":"regulation of chemokine (C-C motif) ligand 6 secretion","type":"narrow"}],"termid":"GO:0035531"}


id: PBO:0000789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAR domain protein (predicted)","termid":"PBO:0000789"}


id: GO:0032302
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimer involved in binding to and correcting insertion/deletion mutations. In human the complex consists of two subunits, MSH2 and MSH3.","definition_xrefs":["PMID:11005803"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair complex","termid":"GO:0032300"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"MutSbeta complex","synonyms":[{"name":"MMR complex","type":"broad"},{"name":"MSH2/MSH3 complex","type":"exact"}],"termid":"GO:0032302"}


id: GO:0097171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ADP-L-glycero-beta-D-manno-heptose, an ADP-L-glycero-D-manno-heptose having beta-configuration at the anomeric centre of the heptose. ADP-L-glycero-beta-D-manno-heptose (also called ADP-L-beta-D-heptose or ADP-L-glycero-D-manno-heptose) is a nucleotide-sugar precursor of the inner core lipopolysaccharide (LPS) from D-glycero-beta-D-manno-heptose 7-phosphate.","definition_xrefs":["GOC:yaf","PMID:11751812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"ADP-L-glycero-beta-D-manno-heptose metabolic process","termid":"GO:0097170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ADP-L-glycero-beta-D-manno-heptose biosynthetic process","synonyms":[{"name":"ADP-L-glycero-beta-D-manno-heptose anabolism","type":"exact"},{"name":"ADP-L-glycero-beta-D-manno-heptose biosynthesis","type":"exact"},{"name":"ADP-L-glycero-beta-D-manno-heptose formation","type":"exact"},{"name":"ADP-L-glycero-beta-D-manno-heptose synthesis","type":"exact"}],"termid":"GO:0097171"}


id: PBO:0001794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase complex II subunit Rpb7","termid":"PBO:0001794"}


id: PBO:0073875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 10 member 3","termid":"PBO:0073875"}


id: PBO:0075886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1","termid":"PBO:0075886"}


id: PBO:0083188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the uncharacterized gene YIL177C","termid":"PBO:0083188"}


id: PBO:0052263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 3A","termid":"PBO:0052263"}


id: PBO:0077510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 229B","termid":"PBO:0077510"}


id: PBO:0064452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein O-fucosyltransferase 1","termid":"PBO:0064452"}


id: PBO:0078599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 12, Y-linked","termid":"PBO:0078599"}


id: PBO:0031418
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_recombination","termid":"PBO:0031418"}


id: SO:1000083
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Sequence variant increases the stability (half-life) of the transcript.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000083 sequence_variant_increasing_transcript_stability (obsolete SO:1000083)","synonyms":[{"name":"mutation increasing transcript stability","type":"related"},{"name":"sequence variant increasing transcript stability","type":"exact"}],"termid":"SO:1000083"}


id: PR:O42849
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phenylalanine--tRNA ligase beta subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01700","PANTHER:PTHR10947:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenylalanine--tRNA ligase beta subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23A1.12c","secondary_identifiers":["UniProtKB:O42849"],"synonyms":[{"name":"PheRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-FARSB","type":"exact"},{"name":"phenylalanyl-tRNA synthetase beta subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42849"}


id: PR:O13894
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug103 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 103 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.02c","synonyms":[{"name":"Spom972h-mug103","type":"exact"}],"termid":"PR:O13894"}


id: PBO:0074942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 107","termid":"PBO:0074942"}


id: GO:0044425
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a membrane, a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete membrane part (obsolete GO:0044425)","termid":"GO:0044425"}


id: PBO:0043553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COL4A2 antisense RNA 2","termid":"PBO:0043553"}


id: GO:0045943
data:
  {"annotated_genes":["SJAG_02608","SJAG_01764","SJAG_01149","SJAG_05187"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88094,103018,106625,113068],"is_not":false,"summary":null,"term":"GO:0045943"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transcription mediated by RNA polymerase I.","definition_xrefs":["GOC:go_curators","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase I","termid":"GO:0006356"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"},{"relation_name":"positively_regulates","term_name":"transcription by RNA polymerase I","termid":"GO:0006360"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01149":null,"SJAG_01764":null,"SJAG_02608":null,"SJAG_05187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"positive regulation of transcription by RNA polymerase I","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of transcription from RNA polymerase I promoter","type":"narrow"},{"name":"positive regulation of transcription from Pol I promoter","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase I promoter","type":"exact"},{"name":"stimulation of transcription from RNA polymerase I promoter","type":"narrow"},{"name":"up regulation of transcription from RNA polymerase I promoter","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase I promoter","type":"exact"},{"name":"upregulation of transcription from RNA polymerase I promoter","type":"exact"}],"termid":"GO:0045943","terms_by_termid":{"GO:0045943":null}}


id: FYPO:0000315
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an elongated germ tube, and undergoes septation, but does not go on to form a viable dividing cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with elongated germ tube","termid":"FYPO:0002379"},{"relation_name":"is_a","term_name":"inviable septated vegetative cell with abnormal cell morphology","termid":"FYPO:0002452"},{"relation_name":"is_a","term_name":"elongated septated vegetative cell","termid":"FYPO:0004750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000004","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, with elongated, septated germ tube","synonyms":[{"name":"inviable after spore germination, without cell division, elongated, septated cell","type":"exact"},{"name":"inviable following spore germination with elongated, septated germ tube","type":"exact"},{"name":"inviable germinated spore, without cell division, with elongated, septated germ tube","type":"exact"},{"name":"lethal after spore germination, without cell division, with elongated, septated germ tube","type":"exact"}],"termid":"FYPO:0000315"}


id: GO:0033909
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of 1,2-alpha-L-fucoside linkages in fucoidan without release of sulfate.","definition_xrefs":["PMID:6417453","PMID:11910806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"fucoidanase activity","secondary_identifiers":["MetaCyc:RXN-20949","EC:3.2.1.211"],"synonyms":[{"name":"poly(1,2-alpha-L-fucoside-4-sulfate) glycanohydrolase activity","type":"related"}],"termid":"GO:0033909"}


id: PBO:0088534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CGI-48 family Utp18","termid":"PBO:0088534"}


id: PBO:0012276
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cdc-Fifteen-Interacting C2 domain","termid":"PBO:0012276"}


id: PBO:0000464
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.4.4","termid":"PBO:0000464"}


id: GO:0003938
data:
  {"annotated_genes":["SJAG_01298"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104326],"is_not":false,"summary":null,"term":"GO:0003938"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: inosine 5'-phosphate + NAD+ + H2O = xanthosine 5'-phosphate + NADH + H+.","definition_xrefs":["EC:1.1.1.205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01298":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"IMP dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-73794","MetaCyc:IMP-DEHYDROG-RXN","RHEA:11708","Reactome:R-HSA-9748945"],"synonyms":[{"name":"IMP oxidoreductase activity","type":"related"},{"name":"IMP:NAD+ oxidoreductase activity","type":"related"},{"name":"inosinate dehydrogenase activity","type":"related"},{"name":"inosine 5'-monophosphate dehydrogenase activity","type":"related"},{"name":"inosine monophosphate dehydrogenase activity","type":"related"},{"name":"inosine monophosphate oxidoreductase activity","type":"related"},{"name":"inosine-5'-phosphate dehydrogenase activity","type":"related"},{"name":"inosinic acid dehydrogenase activity","type":"related"}],"termid":"GO:0003938","terms_by_termid":{"GO:0003938":null}}


id: GO:0010561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the chemical reactions and pathways resulting in the formation of a glycoprotein, a protein that contains covalently bound glycose (i.e. monosaccharide) residues; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"regulation of glycoprotein biosynthetic process","termid":"GO:0010559"},{"relation_name":"is_a","term_name":"negative regulation of glycoprotein metabolic process","termid":"GO:1903019"},{"relation_name":"negatively_regulates","term_name":"glycoprotein biosynthetic process","termid":"GO:0009101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glycoprotein biosynthetic process","termid":"GO:0010561"}


id: FYPO:0001136
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any 27S rRNA precursor measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased rRNA precursor level","termid":"FYPO:0003600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"increased 27S rRNA precursor level","synonyms":[{"name":"increased 27S rRNA precursor accumulation","type":"related"},{"name":"increased 27S rRNA precursor level during mitotic cell cycle","type":"related"},{"name":"increased 27S rRNA precursor level during vegetative growth","type":"exact"},{"name":"increased 27S rRNA precursor transcript level","type":"exact"}],"termid":"FYPO:0001136"}


id: SO:0002351
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A fragile site found in the chromosomes of less than five percent of the human population.","definition_xrefs":["PMID:17608616","PMID:16236432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fragile_site","termid":"SO:0002349"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rare_fragile_site","termid":"SO:0002351"}


id: PBO:0042547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 11B","termid":"PBO:0042547"}


id: PBO:0041552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 18","termid":"PBO:0041552"}


id: PBO:0048469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glial cells missing transcription factor 2","termid":"PBO:0048469"}


id: GO:0002558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An inflammatory response driven by antigen recognition by antibodies bound to Fc receptors on mast cells, occurring within minutes after exposure of a sensitized individual to the antigen, and leading to the release of a variety of inflammatory mediators such as histamines.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mast cell mediated immunity","termid":"GO:0002448"},{"relation_name":"is_a","term_name":"type I hypersensitivity","termid":"GO:0016068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type I hypersensitivity mediated by mast cells","termid":"GO:0002558"}


id: PBO:0061489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor interacting protein 2","termid":"PBO:0061489"}


id: PBO:0068406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 225","termid":"PBO:0068406"}


id: GO:0035139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the pelvic fin are generated and organized. Pelvic fins are bilaterally paired fins mounted in a ventral-lateral position on most fish. These fins are used primarily for lateral mobility and propulsion.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fin morphogenesis","termid":"GO:0033334"},{"relation_name":"part_of","term_name":"pelvic fin development","termid":"GO:0033340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pelvic fin morphogenesis","termid":"GO:0035139"}


id: GO:0140663
data:
  {"annotated_genes":["SJAG_02895","SJAG_02994"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94996,96098],"is_not":false,"summary":null,"term":"GO:0140663"}]},"cv_name":"molecular_function","definition":"Binding to and delivering metal ions to a target protein, driven by ATP hydrolysis.","definition_xrefs":["PMID:16843540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metallochaperone activity","termid":"GO:0016530"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02895":null,"SJAG_02994":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140104","GO:0003674"],"is_obsolete":false,"name":"ATP-dependent FeS chaperone activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140663","terms_by_termid":{"GO:0140663":null}}


id: PBO:0068295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 2","termid":"PBO:0068295"}


id: PBO:0068797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 34, pseudogene","termid":"PBO:0068797"}


id: PBO:0064782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPM1B divergent transcript","termid":"PBO:0064782"}


id: PBO:0067324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 415, pseudogene","termid":"PBO:0067324"}


id: PBO:0003727
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally activates genes required for anaerobic growth under oxygen-limiting conditions","termid":"PBO:0003727"}


id: GO:0034348
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a type III interferon and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. Interferon lambda is the only member of the type III interferon found so far.","definition_xrefs":["PMID:16734557","PMID:15546383","GOC:signaling","GOC:add","ISBN:0126896631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interferon receptor activity","termid":"GO:0004904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"type III interferon receptor activity","synonyms":[{"name":"interferon-lambda receptor activity","type":"narrow"}],"termid":"GO:0034348"}


id: MOD:00516
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["RESID:AA0151#var","Unimod:148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"Hex1HexNAc2 N4-glycosylated asparagine","synonyms":[{"name":"Hex(1)HexNAc(2)","type":"related"},{"name":"Hex1HexNAc2","type":"related"}],"termid":"MOD:00516"}


id: PBO:0080652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WEE1 pseudogene 1","termid":"PBO:0080652"}


id: PBO:0076260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supervillin family member 2, pseudogene","termid":"PBO:0076260"}


id: GO:0016416
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a palmitoyl group to an oxygen atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"},{"relation_name":"is_a","term_name":"palmitoyltransferase activity","termid":"GO:0016409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"O-palmitoyltransferase activity","secondary_identifiers":["Reactome:R-HSA-2453855","Reactome:R-HSA-2466710","Reactome:R-HSA-2404137"],"termid":"GO:0016416"}


id: PR:Q9P7J8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gad8 gene.","definition_xrefs":["UniProtKB:Q9P7J8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase gad8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.07","synonyms":[{"name":"Spom972h-gad8","type":"exact"}],"termid":"PR:Q9P7J8"}


id: GO:0010283
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pinoresinol + NADPH + H+ = lariciresinol + NADP+.","definition_xrefs":["PMID:7592828","PMID:10066819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"pinoresinol reductase activity","termid":"GO:0010283"}


id: PBO:0078728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Met (anticodon CAT) 3-2","termid":"PBO:0078728"}


id: RO:0002502
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"depends_on","termid":"RO:0002502"}


id: MOD:00163
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(N-acetylaminogalactosyl)-L-serine.","definition_xrefs":["PubMed:9092502","RESID:AA0154","PubMed:115869","PubMed:3086323","PubMed:16005634","PubMed:8948436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylaminogalactosylated residue","termid":"MOD:00563"},{"relation_name":"is_a","term_name":"O-(N-acetylamino)hexosyl-L-serine","termid":"MOD:01675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"O-(N-acetylamino)galactosyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(2-acetamido-2-deoxy-alpha-D-galactopyranosyloxy)propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (GalNAc) serine","type":"exact"},{"name":"HexNAc","type":"related"},{"name":"O-(N-acetylamino)galactosyl-L-serine","type":"exact"},{"name":"O3-(N-acetylgalactosaminyl)serine","type":"exact"},{"name":"OGalNAcSer","type":"exact"},{"name":"mucin type O-glycosylserine","type":"exact"}],"termid":"MOD:00163"}


id: PBO:0055490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2924","termid":"PBO:0055490"}


id: GO:1904156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a DN3 thymocyte. A DN3 thymocyte is a CD4-,CD8- thymocyte that is also CD44+,CD25+.","definition_xrefs":["PMID:25398325","GOC:TermGenie","GO_REF:0000086","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell differentiation in thymus","termid":"GO:0033077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"DN3 thymocyte differentiation","termid":"GO:1904156"}


id: PBO:0034247
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_marker_for","termid":"PBO:0034247"}


id: GO:0050157
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-ornithine = D-ornithine.","definition_xrefs":["EC:5.1.1.12","MetaCyc:ORNITHINE-RACEMASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"ornithine racemase activity","secondary_identifiers":["RHEA:11584"],"termid":"GO:0050157"}


id: PBO:0111795
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin family","termid":"PBO:0111795"}


id: PBO:0034102
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_function","termid":"PBO:0034102"}


id: GO:0097411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by hypoxia-inducible factor (HIF1) in response to lowered oxygen levels (hypoxia). Under hypoxic conditions, the oxygen-sensitive alpha-subunit of hypoxia-inducible factor (HIF)-1 dimerizes with a HIF1-beta subunit (also called ARNT or aryl-hydrocarbon-receptor nuclear translocator), translocates to the nucleus and activates transcription of genes whose products participate in responding to hypoxia.","definition_xrefs":["GOC:bf","PMID:16887934","GOC:jc","PMID:26579469"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"},{"relation_name":"part_of","term_name":"cellular response to hypoxia","termid":"GO:0071456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"hypoxia-inducible factor-1alpha signaling pathway","synonyms":[{"name":"HIF1alpha pathway","type":"exact"},{"name":"hypoxia-inducible factor signaling","type":"exact"},{"name":"hypoxia-inducible factor-1alpha signalling pathway","type":"exact"}],"termid":"GO:0097411"}


id: PBO:0055273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2700","termid":"PBO:0055273"}


id: FYPO:0000450
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the centromere of a chromosome is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during vegetative growth","termid":"FYPO:0000449"},{"relation_name":"is_a","term_name":"decreased protein localization to chromosome during vegetative growth","termid":"FYPO:0002839"},{"relation_name":"is_a","term_name":"decreased protein localization to centromere","termid":"FYPO:0006238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to centromere during vegetative growth","synonyms":[{"name":"decreased protein localisation to centromere during vegetative growth","type":"exact"},{"name":"decreased protein localisation to chromosome, centromeric region during vegetative growth","type":"exact"},{"name":"decreased protein localization to centromere during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromosome, centric region during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromosome, centromeric region during vegetative growth","type":"exact"},{"name":"reduced protein localization to centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0000450"}


id: PBO:0055205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2630","termid":"PBO:0055205"}


id: GO:0090323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of a prostaglandin that contributes to the immune response. Prostaglandins are a group of biologically active metabolites which contain a cyclopentane ring.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin secretion","termid":"GO:0032310"},{"relation_name":"part_of","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052","GO:0051179"],"is_obsolete":false,"name":"prostaglandin secretion involved in immune response","termid":"GO:0090323"}


id: PBO:0027555
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_meiosis_II","termid":"PBO:0027555"}


id: PBO:0043235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride voltage-gated channel 6","termid":"PBO:0043235"}


id: GO:0070354
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the zinc finger transcription factor GATA2, the LIM domain protein Lmo2 (RBTN2), the basic helix-loop-helix protein TAL1 and its binding partner TCF3. The complex is involved transcriptional regulation in hematopoiesis.","definition_xrefs":["PMID:7568177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"GATA2-TAL1-TCF3-Lmo2 complex","termid":"GO:0070354"}


id: PBO:0002139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Uap56","termid":"PBO:0002139"}


id: FYPO:0001560
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-threonine measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular threonine level","secondary_identifiers":["FYPO:0001614"],"synonyms":[{"name":"decreased cellular L-threonine level","type":"exact"},{"name":"decreased cellular threonine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular threonine level during vegetative growth","type":"exact"},{"name":"decreased level of threonine in cell","type":"exact"},{"name":"decreased threonine accumulation","type":"related"},{"name":"reduced cellular threonine level","type":"exact"},{"name":"reduced level of threonine in cell","type":"exact"}],"termid":"FYPO:0001560"}


id: FYPO:0005996
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any ribosomal RNA (rRNA) primary transcript, rRNA precursor or processing intermediate, or mature rRNA measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"altered rRNA or precursor level","synonyms":[{"name":"abnormal rRNA or precursor level","type":"exact"},{"name":"altered rRNA or precursor accumulation","type":"related"},{"name":"altered rRNA or precursor level during mitotic cell cycle","type":"related"},{"name":"altered rRNA or precursor level during vegetative growth","type":"exact"},{"name":"altered rRNA or precursor transcript level","type":"exact"}],"termid":"FYPO:0005996"}


id: GO:0031705
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a bombesin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"bombesin receptor binding","synonyms":[{"name":"bombesin receptor ligand","type":"narrow"}],"termid":"GO:0031705"}


id: PBO:0052028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JPT1 pseudogene 1","termid":"PBO:0052028"}


id: GO:0045613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of plasmatocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hemocyte differentiation","termid":"GO:0045610"},{"relation_name":"regulates","term_name":"plasmatocyte differentiation","termid":"GO:0042387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of plasmatocyte differentiation","termid":"GO:0045613"}


id: GO:0034525
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-naphthaldehyde + NAD+ + H2O = 1-naphthoic acid + NADH + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-naphthaldehyde dehydrogenase activity (obsolete GO:0034525)","termid":"GO:0034525"}


id: PBO:0072456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 20","termid":"PBO:0072456"}


id: PBO:0051663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"innate immunity activator","termid":"PBO:0051663"}


id: GO:0002547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of the tissue kallikrein-kinin cascade.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of kinin cascade","termid":"GO:0002258"},{"relation_name":"is_a","term_name":"regulation of tissue kallikrein-kinin cascade","termid":"GO:0002382"},{"relation_name":"positively_regulates","term_name":"tissue kallikrein-kinin cascade","termid":"GO:0002255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0051604"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"positive regulation of tissue kallikrein-kinin cascade","synonyms":[{"name":"activation of tissue kallikrein-kinin cascade","type":"narrow"},{"name":"positive regulation of glandular kallikrein-kinin cascade","type":"exact"},{"name":"stimulation of tissue kallikrein-kinin cascade","type":"narrow"},{"name":"up regulation of tissue kallikrein-kinin cascade","type":"exact"},{"name":"up-regulation of tissue kallikrein-kinin cascade","type":"exact"},{"name":"upregulation of tissue kallikrein-kinin cascade","type":"exact"}],"termid":"GO:0002547"}


id: GO:0090639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphatidylcholine biosynthetic process that involves a one-step direct condensation of choline with CDP-diacylglycerol to form phosphatidylcholine.","definition_xrefs":["MetaCyc:PWY-6826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine biosynthetic process","termid":"GO:0006656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylcholine biosynthesis from choline and CDP-diacylglycerol","termid":"GO:0090639"}


id: GO:0046540
data:
  {"annotated_genes":["SJAG_04529","SJAG_00989","SJAG_02279","SJAG_01634","SJAG_00147","SJAG_00531","SJAG_02304","SJAG_03469","SJAG_04405","SJAG_02295","SJAG_01327","SJAG_03410","SJAG_00643","SJAG_04222","SJAG_03070","SJAG_01301","SJAG_01819","SJAG_03954","SJAG_05240","SJAG_01870","SJAG_02843","SJAG_04538","SJAG_02455","SJAG_04497","SJAG_00414","SJAG_02469","SJAG_03460","SJAG_03369","SJAG_04433","SJAG_01308"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85600,89002,89160,89368,90982,91241,91608,91665,91885,94075,94846,96688,98249,98608,101877,101919,102388,102589,104587,106116,106685,107193,107767,108944,110423,110923,110998,111274,111934,112479],"is_not":false,"summary":null,"term":"GO:0046540"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that is formed by the association of the U4/U6 and U5 snRNPs.","definition_xrefs":["GOC:krc","GOC:pr","ISBN:0879695897","PMID:11867543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal tri-snRNP complex","termid":"GO:0097526"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00147":null,"SJAG_00414":null,"SJAG_00531":null,"SJAG_00643":null,"SJAG_00989":null,"SJAG_01301":null,"SJAG_01308":null,"SJAG_01327":null,"SJAG_01634":null,"SJAG_01819":null,"SJAG_01870":null,"SJAG_02279":null,"SJAG_02295":null,"SJAG_02304":null,"SJAG_02455":null,"SJAG_02469":null,"SJAG_02843":null,"SJAG_03070":null,"SJAG_03369":null,"SJAG_03410":null,"SJAG_03460":null,"SJAG_03469":null,"SJAG_03954":null,"SJAG_04222":null,"SJAG_04405":null,"SJAG_04433":null,"SJAG_04497":null,"SJAG_04529":null,"SJAG_04538":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"U4/U6.U5 snRNP complex","type":"exact"}],"termid":"GO:0046540","terms_by_termid":{"GO:0046540":null}}


id: GO:0004032
data:
  {"annotated_genes":["SJAG_01869","SJAG_04660","SJAG_02010","SJAG_03958"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87861,91080,108791],"is_not":false,"summary":null,"term":"GO:0004032"},{"annotations":[91816,97240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032866"},{"annotations":[91817,97241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032867"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an alditol + NADP+ = an aldose + NADPH + H+.","definition_xrefs":["EC:1.1.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NADP+) activity","termid":"GO:0008106"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01869":null,"SJAG_02010":null,"SJAG_03958":null,"SJAG_04660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"aldose reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R02820","MetaCyc:ALDEHYDE-REDUCTASE-RXN","Reactome:R-HSA-196060","Reactome:R-HSA-5652172","RHEA:12789"],"synonyms":[{"name":"aldehyde reductase activity","type":"related"},{"name":"alditol:NADP+ 1-oxidoreductase activity","type":"exact"},{"name":"aldose reductase activity","type":"related"},{"name":"polyol dehydrogenase (NADP(+)) activity","type":"related"}],"termid":"GO:0004032","terms_by_termid":{"GO:0004032":null,"GO:0032866":null,"GO:0032867":null}}


id: FYPO:0007396
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of heme into the cell occurs to a lower extent than normal.","definition_xrefs":["GO:0140420","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased heme import","synonyms":[{"name":"decreased haem import","type":"exact"},{"name":"decreased heme import during mitotic cell cycle","type":"related"},{"name":"decreased heme import during vegetative growth","type":"exact"},{"name":"decreased heme import into cell","type":"exact"},{"name":"reduced heme import","type":"exact"}],"termid":"FYPO:0007396"}


id: PBO:0056886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial calcium uptake 1","termid":"PBO:0056886"}


id: PBO:0000460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S24 (predicted)","termid":"PBO:0000460"}


id: PBO:0031471
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_nickel","termid":"PBO:0031471"}


id: PBO:0090146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar transporter chaperone (VTC) complex polyphosphate synthetase subunit Vtc2/3","termid":"PBO:0090146"}


id: PBO:0075982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal transducer and activator of transcription 6","termid":"PBO:0075982"}


id: FYECO:0000411
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which egtazic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ egtazic acid","synonyms":[{"name":"+ EGTA","type":"exact"},{"name":"EGTA added","type":"exact"},{"name":"egtazic acid added","type":"exact"}],"termid":"FYECO:0000411"}


id: PBO:0005395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L12 (predicted)","termid":"PBO:0005395"}


id: PBO:0060348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin XVI","termid":"PBO:0060348"}


id: PBO:0065083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psoriasis associated non-protein coding RNA induced by stress","termid":"PBO:0065083"}


id: PBO:0086431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative integral membrane protein; member of DUP240 gene family; GFP-fusion protein is induced in response to the DNA-damaging agent MMS","termid":"PBO:0086431"}


id: FYPO:0002631
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which dTTP biosynthesis is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal dTTP biosynthetic process","synonyms":[{"name":"abnormal dTTP biosynthesis","type":"exact"},{"name":"abnormal dTTP biosynthetic process during mitotic cell cycle","type":"related"},{"name":"abnormal dTTP biosynthetic process during vegetative growth","type":"exact"}],"termid":"FYPO:0002631"}


id: GO:1903931
data:
  {"annotated_genes":["SJAG_04712"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84525],"is_not":false,"summary":null,"term":"GO:1903931"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pyrimidine-containing compound salvage.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23695302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"regulation of pyrimidine-containing compound salvage","termid":"GO:1903930"},{"relation_name":"positively_regulates","term_name":"pyrimidine-containing compound salvage","termid":"GO:0008655"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04712":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pyrimidine-containing compound salvage","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of pyrimidine salvage","type":"related"},{"name":"activation of pyrimidine-containing compound salvage","type":"narrow"},{"name":"positive regulation of pyrimidine salvage","type":"related"},{"name":"up regulation of pyrimidine salvage","type":"related"},{"name":"up regulation of pyrimidine-containing compound salvage","type":"exact"},{"name":"up-regulation of pyrimidine salvage","type":"related"},{"name":"up-regulation of pyrimidine-containing compound salvage","type":"exact"},{"name":"upregulation of pyrimidine salvage","type":"related"},{"name":"upregulation of pyrimidine-containing compound salvage","type":"exact"}],"termid":"GO:1903931","terms_by_termid":{"GO:1903931":null}}


id: GO:0018444
data:
  {"annotated_genes":["SJAG_01696","SJAG_00338"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87145,87146,113568],"is_not":false,"summary":null,"term":"GO:0018444"}]},"cv_name":"cellular_component","definition":"A heterodimeric complex involved in the release of a nascent polypeptide chain from a ribosome.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00338":null,"SJAG_01696":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"translation release factor complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"eukaryotic peptide chain release factor","type":"exact"},{"name":"peptide chain release factor","type":"broad"}],"termid":"GO:0018444","terms_by_termid":{"GO:0018444":null}}


id: GO:0043052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to a temperature gradient. Movement may be towards either a higher or lower temperature.","definition_xrefs":["GOC:cab1","WB_REF:cgc467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to temperature stimulus","termid":"GO:0009266"},{"relation_name":"is_a","term_name":"taxis","termid":"GO:0042330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thermotaxis","secondary_identifiers":["Wikipedia:Thermotaxis"],"synonyms":[{"name":"taxis in response to temperature stimulus","type":"exact"}],"termid":"GO:0043052"}


id: PBO:0046063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF3J pseudogene 2","termid":"PBO:0046063"}


id: GO:2000570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T-helper 2 cell activation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of CD4-positive, alpha-beta T cell activation","termid":"GO:2000516"},{"relation_name":"is_a","term_name":"regulation of T-helper 2 cell activation","termid":"GO:2000569"},{"relation_name":"positively_regulates","term_name":"T-helper 2 cell activation","termid":"GO:0035712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of T-helper 2 cell activation","synonyms":[{"name":"positive regulation of Th2 cell activation","type":"exact"}],"termid":"GO:2000570"}


id: RO:0002592
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p results in organization of c iff p results in the assembly, arrangement of constituent parts, or disassembly of c","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_organization_of","termid":"RO:0002592"}


id: PBO:0070615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 83","termid":"PBO:0070615"}


id: PBO:0076432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 11 like 8","termid":"PBO:0076432"}


id: PBO:0001165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L3","termid":"PBO:0001165"}


id: MOD:00826
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-threonine residue and an L-cysteine residue by a thioester bond to form S-(L-threonyl)-L-cysteine.","definition_xrefs":["RESID:AA0415","PubMed:15268951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioester crosslinked residues","termid":"MOD:00395"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(L-threonyl)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(2S,3R)-2-amino-3-hydroxybutanoyl]sulfanyl)propanoic acid","type":"exact"},{"name":"CROSSLNK Threonyl cysteine thioester (Cys-Thr)","type":"exact"},{"name":"S-(2-amino-3-hydroxybutanoyl)cysteine","type":"exact"},{"name":"S-(L-threonyl)-L-cysteine","type":"exact"},{"name":"XLNK1ThrSCys","type":"exact"},{"name":"threonine cysteine thioester","type":"exact"}],"termid":"MOD:00826"}


id: PBO:0070614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 82","termid":"PBO:0070614"}


id: GO:2001300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a lipoxin. A lipoxin is a non-classic eicosanoid and signaling molecule that has four conjugated double bonds and is derived from arachidonic acid.","definition_xrefs":["GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lipoxin metabolic process","synonyms":[{"name":"lipoxin metabolism","type":"exact"}],"termid":"GO:2001300"}


id: GO:0017114
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Stops, prevents or reduces the activity of a protease by a wide-spectrum protease inhibitor. A wide-spectrum protease inhibitor is a protein having a peptide stretch which contains specific cleavage sites for different proteinases enabling inhibition of all four classes of proteinases by formation of a covalent bond between the inhibitor and the protease.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete wide-spectrum protease inhibitor activity (obsolete GO:0017114)","synonyms":[{"name":"wide-spectrum protease inhibitor activity","type":"exact"},{"name":"wide-spectrum proteinase inhibitor","type":"exact"}],"termid":"GO:0017114"}


id: PBO:0090321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome 3'-5' exoribonuclease subunit Rrp6","termid":"PBO:0090321"}


id: PBO:0002806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA, poly(A) bearing (predicted)","termid":"PBO:0002806"}


id: GO:0045213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving neurotransmitter receptors.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotransmitter receptor metabolic process (obsolete GO:0045213)","synonyms":[{"name":"neurotransmitter receptor metabolism","type":"exact"}],"termid":"GO:0045213"}


id: PBO:0017622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0136 family mitochondrial protein, implicated in heme biosynthesis","termid":"PBO:0017622"}


id: FYPO:0001356
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01205:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01205","name":"crb2delta","uniquename":"SJAG_01205:allele-1"},"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_01410:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01410","name":"rad51delta","uniquename":"SJAG_01410:allele-1"},"SJAG_01605:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01605","name":"rad9delta","uniquename":"SJAG_01605:allele-1"},"SJAG_01680:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01680","name":"chk1delta","uniquename":"SJAG_01680:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_01946:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01946","name":"cem1delta","uniquename":"SJAG_01946:allele-1"},"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_03198:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03198","name":"oar2delta","uniquename":"SJAG_03198:allele-1"},"SJAG_03198:allele-2":{"allele_type":"amino_acid_mutation","description":"Y189D cold sensitive","gene_uniquename":"SJAG_03198","name":"oar2-51","uniquename":"SJAG_03198:allele-2"},"SJAG_03198:allele-3":{"allele_type":"amino_acid_mutation","description":"R72A,L75A,R106A,L109A","gene_uniquename":"SJAG_03198","name":"oar2-dm12","synonyms":[{"name":"destruction box mutations","reference":"PMID:23786411","type":"exact"}],"uniquename":"SJAG_03198:allele-3"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_04287:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04287","name":"cds1delta","uniquename":"SJAG_04287:allele-1"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-3":{"allele_type":"other","description":"Pmk1 from S. pombe","gene_uniquename":"SJAG_04551","name":"Pmk1Sp","uniquename":"SJAG_04551:allele-3"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"},"SJAG_04671:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04671","name":"mrc1delta","uniquename":"SJAG_04671:allele-1"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000085"},{"annotations":[115269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000088"}],"single_locus_phenotype":[{"annotations":[115163,115175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004481"},{"annotations":[115425,115624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000082"},{"annotations":[115375,115487,115360,115361,115359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000080"},{"annotations":[115241,115432,115436,115323,115440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001355"},{"annotations":[115590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005152"},{"annotations":[115608,115611,115603,115582,115597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007521"},{"annotations":[115620,115166,115502,115178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000097"},{"annotations":[115271,115277,115560,115276,115278,115561,115562,115270],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000085"},{"annotations":[115596,115581],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000079"},{"annotations":[115505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001408"},{"annotations":[115619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000087"},{"annotations":[115274,115273,115275,115267,115268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000088"},{"annotations":[115426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000106"},{"annotations":[115468,115469,115421,115420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000107"},{"annotations":[115488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000714"},{"annotations":[115621],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001214"},{"annotations":[115179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000841"},{"annotations":[115591],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007522"},{"annotations":[115296,115554,115311,115486,115280,115555,115279,115485,115338,115206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001234"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which vegetative cell population growth is abnormal. Cell population growth refers to an increase in the number of cells in the population as individual cells grow and divide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell population growth","termid":"FYPO:0000045"},{"relation_name":"is_a","term_name":"vegetative cell population growth phenotype","termid":"FYPO:0001358"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00364":null,"SJAG_00409":null,"SJAG_00429":null,"SJAG_00514":null,"SJAG_00610":null,"SJAG_01205":null,"SJAG_01242":null,"SJAG_01355":null,"SJAG_01410":null,"SJAG_01605":null,"SJAG_01680":null,"SJAG_01787":null,"SJAG_01794":null,"SJAG_01946":null,"SJAG_02527":null,"SJAG_02592":null,"SJAG_02763":null,"SJAG_03198":null,"SJAG_03449":null,"SJAG_03453":null,"SJAG_03892":null,"SJAG_04287":null,"SJAG_04312":null,"SJAG_04464":null,"SJAG_04551":null,"SJAG_04671":null,"SJAG_04697":null,"SJAG_04703":null,"SJAG_05207":null},"genotype_count":36,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(Pmk1 from S. pombe)","display_uniquename":"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-3","expression":"Not assayed or wild type"}]}]},"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"cds1delta":{"display_name":"cds1delta","display_uniquename":"cds1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04287:allele-1","expression":"Null"}]}]},"cem1delta":{"display_name":"cem1delta","display_uniquename":"cem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01946:allele-1","expression":"Null"}]}]},"chk1delta":{"display_name":"chk1delta","display_uniquename":"chk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01680:allele-1","expression":"Null"}]}]},"chk1delta__crb2delta":{"display_name":"chk1delta crb2delta","display_uniquename":"chk1delta__crb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01680:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01205:allele-1","expression":"Null"}]}]},"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"crb2delta":{"display_name":"crb2delta","display_uniquename":"crb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01205:allele-1","expression":"Null"}]}]},"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"gpd1delta":{"display_name":"gpd1delta","display_uniquename":"gpd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00409:allele-1","expression":"Null"}]}]},"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"mrc1delta":{"display_name":"mrc1delta","display_uniquename":"mrc1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04671:allele-1","expression":"Null"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression":{"display_name":"oar2-51(Y189D cold sensitive)[Overexpression]","display_uniquename":"oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-2","expression":"Overexpression"}]}]},"oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression":{"display_name":"oar2-dm12(R72A,L75A,R106A,L109A aa)[Overexpression]","display_uniquename":"oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-3","expression":"Overexpression"}]}]},"oar2delta":{"display_name":"oar2delta","display_uniquename":"oar2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-1","expression":"Null"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]},"rad26delta":{"display_name":"rad26delta","display_uniquename":"rad26delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00429:allele-1","expression":"Null"}]}]},"rad3delta":{"display_name":"rad3delta","display_uniquename":"rad3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00364:allele-1","expression":"Null"}]}]},"rad51delta":{"display_name":"rad51delta","display_uniquename":"rad51delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01410:allele-1","expression":"Null"}]}]},"rad9delta":{"display_name":"rad9delta","display_uniquename":"rad9delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01605:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"vps32delta":{"display_name":"vps32delta","display_uniquename":"vps32delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01242:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01680","SJAG_01205"],"name":"abnormal vegetative cell population growth","references_by_uniquename":{"PMID:20368354":null,"PMID:23090706":null,"PMID:23786411":null,"PMID:24184107":null,"PMID:26774782":null,"PMID:27678009":null,"PMID:28954740":null,"PMID:29566183":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:31150379":null,"PMID:32109380":null,"PMID:32243490":null,"PMID:32915139":null,"PMID:33791858":null,"PMID:34198697":null,"PMID:36058798":null,"PMID:37164017":null,"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_04464","SJAG_01794","SJAG_04551","SJAG_04703","SJAG_05207","SJAG_01410","SJAG_04287","SJAG_00610","SJAG_00429","SJAG_01242","SJAG_01787","SJAG_00364","SJAG_01205","SJAG_02592","SJAG_01680","SJAG_02763","SJAG_01355","SJAG_01605","SJAG_01946","SJAG_03198","SJAG_00266","SJAG_03453","SJAG_03892","SJAG_04312","SJAG_03449","SJAG_00409","SJAG_04697","SJAG_04671","SJAG_00514","SJAG_02527"],"single_locus_genotype_uniquenames":["oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression","pck1delta","oar2delta","Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","pck2delta","oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","cmp7delta","rad26delta","rad9delta","vps4delta","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","pka1delta","scd2delta","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","man1delta","cox6delta","cds1delta","pmk1delta","crb2delta","rad51delta","cem1delta","atf1delta","mrc1delta","scd1delta","ras1delta","gpd1delta","chk1delta","rad3delta","vps32delta","ned1delta","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","gms1delta","sty1delta","for3delta","lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown"],"synonyms":[{"name":"vegetative growth defect","type":"related"}],"termid":"FYPO:0001356","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000103":null,"FYECO:0000117":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000314":null,"FYPO:0000079":null,"FYPO:0000080":null,"FYPO:0000082":null,"FYPO:0000085":null,"FYPO:0000087":null,"FYPO:0000088":null,"FYPO:0000097":null,"FYPO:0000106":null,"FYPO:0000107":null,"FYPO:0000714":null,"FYPO:0000841":null,"FYPO:0001214":null,"FYPO:0001234":null,"FYPO:0001355":null,"FYPO:0001408":null,"FYPO:0004481":null,"FYPO:0005152":null,"FYPO:0007521":null,"FYPO:0007522":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: PBO:0030639
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_fructose_carbon_source","termid":"PBO:0030639"}


id: GO:0072344
data:
  {"annotated_genes":["SJAG_00188","SJAG_00898","SJAG_01497","SJAG_05000","SJAG_02746","SJAG_02096","SJAG_01074","SJAG_03189"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83990,87917,95508,99192,102917,110068,112160],"is_not":false,"summary":null,"term":"GO:0072344"},{"annotations":[110473],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140708"}]},"cv_name":"biological_process","definition":"A process of translational elongation that takes place when a ribosome has stalled during translation, and results in freeing the ribosome from the stalled translation complex.","definition_xrefs":["PMID:20117091","GOC:jh2","GOC:mah","PMID:18557701","PMID:19170872","PMID:20185543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational elongation","termid":"GO:0006414"},{"relation_name":"is_a","term_name":"ribosome disassembly","termid":"GO:0032790"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00188":null,"SJAG_00898":null,"SJAG_01074":null,"SJAG_01497":null,"SJAG_02096":null,"SJAG_02746":null,"SJAG_03189":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"rescue of stalled ribosome","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0072344","terms_by_termid":{"GO:0072344":null,"GO:0140708":null}}


id: PBO:0083967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Global transcriptional regulator, component of SAGA, TREX-2 complexes; interacts with RNA polymerase II; involved in mRNA export coupled transcription activation and elongation; involved in post-transcriptional tethering of active genes to nuclear periphery and to non-nascent mRNP; plays role in negatively regulating telomere length through modulation of H2BK123 mono-ubiquitination and its interaction with nuclear pore complex","termid":"PBO:0083967"}


id: PBO:0012287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-60S shuttling factor (predicted)","termid":"PBO:0012287"}


id: GO:0102169
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-methyl-phenazine-1-carboxylate + 2 H+ + NADH + O2 = CO2 + H2O + NAD+ + pyocyanin. Also converts phenazine-1-carboxylate into 1-hydroxyphenazine.","definition_xrefs":["EC:1.14.13.218","PMID:11591691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"5-methylphenazine-1-carboxylate 1-monooxygenase (NADH) activity","synonyms":[{"name":"pyocyanin hydroxylase activity","type":"related"}],"termid":"GO:0102169"}


id: MOD:01250
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction of iodouridine monophosphate with an L-phenylalanine residue.","definition_xrefs":["PubMed:11112526","Unimod:292#F","PubMed:6540775","PubMed:11567090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodouridine monophosphate derivatized residue","termid":"MOD:00611"},{"relation_name":"is_a","term_name":"modified L-phenylalanine residue","termid":"MOD:00914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodouridine monophosphate derivatized phenylalanine","synonyms":[{"name":"Cross-link of (Iodo)-uracil MP with W,F,Y","type":"related"},{"name":"IodoU-AMP","type":"related"}],"termid":"MOD:01250"}


id: PBO:0048819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 5 pseudogene 3","termid":"PBO:0048819"}


id: GO:1901694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of compound eye retinal cell apoptotic process.","definition_xrefs":["GOC:TermGenie","PMID:12021768","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"is_a","term_name":"positive regulation of compound eye retinal cell programmed cell death","termid":"GO:0046672"},{"relation_name":"is_a","term_name":"regulation of compound eye retinal cell apoptotic process","termid":"GO:1901692"},{"relation_name":"positively_regulates","term_name":"compound eye retinal cell apoptotic process","termid":"GO:1990010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of compound eye retinal cell apoptotic process","secondary_identifiers":["GO:0046675"],"synonyms":[{"name":"activation of compound eye retinal cell apoptotic process","type":"narrow"},{"name":"induction of compound eye retinal cell programmed cell death","type":"related"},{"name":"up regulation of compound eye retinal cell apoptotic process","type":"exact"},{"name":"up-regulation of compound eye retinal cell apoptotic process","type":"exact"},{"name":"upregulation of compound eye retinal cell apoptotic process","type":"exact"}],"termid":"GO:1901694"}


id: PBO:0070505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 4","termid":"PBO:0070505"}


id: GO:0034119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of erythrocyte aggregation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of homotypic cell-cell adhesion","termid":"GO:0034111"},{"relation_name":"is_a","term_name":"regulation of erythrocyte aggregation","termid":"GO:0034118"},{"relation_name":"negatively_regulates","term_name":"erythrocyte aggregation","termid":"GO:0034117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of erythrocyte aggregation","synonyms":[{"name":"negative regulation of RBC aggregation","type":"exact"},{"name":"negative regulation of red blood cell aggregation","type":"exact"}],"termid":"GO:0034119"}


id: GO:0007585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"respiratory gaseous exchange by respiratory system","synonyms":[{"name":"breathing","type":"broad"},{"name":"respiration","type":"broad"}],"termid":"GO:0007585"}


id: PBO:0042223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin T1","termid":"PBO:0042223"}


id: GO:0043824
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-succinyl-L-glutamate 5-semialdehyde + H2O + NAD+ = N-succinyl-L-glutamate + 2 H+ + NADH.","definition_xrefs":["EC:1.2.1.71","RHEA:10812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"succinylglutamate-semialdehyde dehydrogenase activity","secondary_identifiers":["MetaCyc:SUCCGLUALDDEHYD-RXN","KEGG_REACTION:R05049"],"synonyms":[{"name":"AruD","type":"related"},{"name":"AstD","type":"related"},{"name":"N-succinyl-L-glutamate 5-semialdehyde:NAD+ oxidoreductase activity","type":"related"},{"name":"N-succinylglutamate 5-semialdehyde dehydrogenase activity","type":"related"},{"name":"SGSD","type":"related"},{"name":"succinyl glutamate-semialdehyde dehydrogenase activity","type":"exact"},{"name":"succinylglutamic semialdehyde dehydrogenase activity","type":"related"}],"termid":"GO:0043824"}


id: GO:0000373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The splicing of Group II introns. This occurs by a ribozymic mechanism where the intron sequence forms a distinct 3D structure, characteristic of Group II introns and containing splice site consensus sequences, that is involved in catalyzing the splicing reactions, though protein factors are also required in vivo. Splicing occurs by a series of two transesterification reactions (mechanistically similar to those for splicing of nuclear mRNAs) initiated by a bulged adenosine residue within the intron sequence as the initiating nucleophile. The intron is excised as a lariat.","definition_xrefs":["GOC:krc","PMID:11377794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA splicing, via transesterification reactions with bulged adenosine as nucleophile","termid":"GO:0000377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"Group II intron splicing","synonyms":[{"name":"mRNA splicing","type":"related"}],"termid":"GO:0000373"}


id: PBO:0064128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-dependent protein kinase inhibitor alpha","termid":"PBO:0064128"}


id: PBO:0043218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic linker associated protein 2","termid":"PBO:0043218"}


id: GO:0030520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A nuclear receptor-mediated signaling pathway initiated by an estrogen binding to an intracellular receptor of the nuclear receptor protein family, and ending with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor-mediated steroid hormone signaling pathway","termid":"GO:0030518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"estrogen receptor signaling pathway","synonyms":[{"name":"estrogen receptor signalling pathway","type":"broad"},{"name":"intracellular estrogen receptor signaling pathway","type":"exact"},{"name":"nuclear receptor-mediated estrogen signaling pathway","type":"exact"}],"termid":"GO:0030520"}


id: GO:0070608
data:
  {"annotated_genes":["SJAG_04666","SJAG_00610","SJAG_02278","SJAG_00424"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88474,90995,85506,98912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of (1->3)-alpha-D-glucans, compounds composed of glucose residues linked by (1->3)-alpha-D-glucosidic bonds, found in the walls of cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of (1->3)-alpha-glucan biosynthetic process","termid":"GO:0070606"},{"relation_name":"is_a","term_name":"regulation of cell wall (1->3)-alpha-glucan metabolic process","termid":"GO:0070607"},{"relation_name":"regulates","term_name":"cell wall (1->3)-alpha-glucan biosynthetic process","termid":"GO:0070598"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_02278":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of cell wall (1->3)-alpha-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cell wall 1,3-alpha-glucan anabolism","type":"exact"},{"name":"regulation of cell wall 1,3-alpha-glucan biosynthesis","type":"exact"},{"name":"regulation of cell wall 1,3-alpha-glucan biosynthetic process","type":"exact"},{"name":"regulation of cell wall 1,3-alpha-glucan formation","type":"exact"},{"name":"regulation of cell wall 1,3-alpha-glucan synthesis","type":"exact"},{"name":"regulation of cell wall alpha-1,3-glucan anabolism","type":"exact"},{"name":"regulation of cell wall alpha-1,3-glucan biosynthesis","type":"exact"},{"name":"regulation of cell wall alpha-1,3-glucan biosynthetic process","type":"exact"},{"name":"regulation of cell wall alpha-1,3-glucan formation","type":"exact"},{"name":"regulation of cell wall alpha-1,3-glucan synthesis","type":"exact"}],"termid":"GO:0070608","terms_by_termid":{"GO:0070610":null}}


id: PR:Q9UT44
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A gamma-glutamyl phosphate reductase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyl phosphate reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC821.11","secondary_identifiers":["UniProtKB:Q9UT44"],"synonyms":[{"name":"GPR (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GSA dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-proA","type":"exact"},{"name":"glutamate-5-semialdehyde dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glutamyl-gamma-semialdehyde dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT44"}


id: PBO:0046071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit L pseudogene 2","termid":"PBO:0046071"}


id: PBO:0051783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing F1","termid":"PBO:0051783"}


id: GO:0006812
data:
  {"annotated_genes":["SJAG_01353","SJAG_01077","SJAG_00542","SJAG_04185","SJAG_00547","SJAG_01913","SJAG_00836","SJAG_02780","SJAG_01355","SJAG_04096","SJAG_03606","SJAG_01471","SJAG_05294","SJAG_02646","SJAG_00976","SJAG_02958","SJAG_01397","SJAG_02322","SJAG_02968","SJAG_02105","SJAG_02883","SJAG_02484","SJAG_03873","SJAG_04698","SJAG_04757","SJAG_02023","SJAG_02445","SJAG_00516","SJAG_03497","SJAG_04830","SJAG_01803","SJAG_00438","SJAG_04551","SJAG_03490","SJAG_03516","SJAG_02532","SJAG_07003","SJAG_00985","SJAG_01669","SJAG_03079","SJAG_03820","SJAG_00136","SJAG_04677","SJAG_03631","SJAG_01129","SJAG_02019","SJAG_01639","SJAG_01817","SJAG_MIT15","SJAG_03399","SJAG_04743","SJAG_04737","SJAG_01527","SJAG_04892","SJAG_MIT09","SJAG_00212","SJAG_03866","SJAG_02578","SJAG_04028","SJAG_04260","SJAG_02735","SJAG_03608","SJAG_04015","SJAG_02779","SJAG_03925","SJAG_03406","SJAG_01078","SJAG_01190","SJAG_03114","SJAG_01400","SJAG_01119","SJAG_00601","SJAG_01090","SJAG_00211","SJAG_00057","SJAG_04122","SJAG_02504","SJAG_04246","SJAG_02834","SJAG_01493","SJAG_05204","SJAG_01541","SJAG_01990","SJAG_02782","SJAG_00080","SJAG_00222","SJAG_03895","SJAG_03850","SJAG_02564","SJAG_01406","SJAG_01435","SJAG_00328","SJAG_04955","SJAG_04616","SJAG_02473","SJAG_00133","SJAG_05229","SJAG_02598","SJAG_00321","SJAG_04471","SJAG_04668","SJAG_04675","SJAG_04167","SJAG_03960","SJAG_02399","SJAG_03231","SJAG_03528","SJAG_02440","SJAG_02877","SJAG_04068","SJAG_01007","SJAG_00915","SJAG_MIT37","SJAG_04905","SJAG_03401","SJAG_01447","SJAG_02457","SJAG_00296","SJAG_04867","SJAG_04258"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036249"},{"annotations":[63629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070574"},{"annotations":[91695,93420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036444"},{"annotations":[88394,88448,110498,95689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098703"},{"annotations":[111629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140146"},{"annotations":[86758,105419,109988,91745,94390,104717,90873,91515,113453,97685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070588"},{"annotations":[103905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060003"},{"annotations":[108852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015677"},{"annotations":[110652,84012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098705"},{"annotations":[97540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097430"},{"annotations":[99853,84013,61772,65785,100670,110653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035434"},{"annotations":[100760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006825"},{"annotations":[87251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061856"},{"annotations":[86760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032472"},{"annotations":[94143,109855,96549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048250"},{"annotations":[61043,91388,99862,108853,109276,88496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034755"},{"annotations":[85339],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140466"},{"annotations":[110695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990616"},{"annotations":[86282,103639,56735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903830"},{"annotations":[99863,91389,104719,63630,61044,87252,86761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071421"},{"annotations":[92612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030001"},{"annotations":[103367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045016"},{"annotations":[90280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140141"},{"annotations":[60701,68146,68459,60267,92872,58085,64588,111151,65784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098655"},{"annotations":[109424,87269],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905949"},{"annotations":[112065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098716"},{"annotations":[112066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035444"},{"annotations":[98208],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905665"},{"annotations":[108405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097623"},{"annotations":[93063,85579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990573"},{"annotations":[57284,61074,66606,85381,93064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071805"},{"annotations":[109835,83768,92803,83769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120029"},{"annotations":[99748,63342,59362,85196,57282,90899,61338,90281,113279,114788,63628,66917,60483,115133,59259,58968,99974,62895,94392,86222,60259,84107,91716,105922,115122,115128,99100,92679,64380,97713,88905,67520,101051,99046,89927,58025,103865,99719,63879,111913,88537,60346,57283,110234,85912,89332,96073,62481,63740,97876,63385,85382,60813,91831,61114,87253,94973,97693,86762,95998,104841,60452,103955,61688,57546,88099,98732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902600"},{"annotations":[88501,99854,88497,108854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033215"},{"annotations":[89435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051209"},{"annotations":[104720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061454"},{"annotations":[61565,61462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044718"},{"annotations":[108855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015891"},{"annotations":[106839,61566,106838,61463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033214"},{"annotations":[92805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036376"},{"annotations":[85383,108406,66605,60814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035725"},{"annotations":[110405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140147"},{"annotations":[100238,109277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071578"},{"annotations":[89827,89828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140209"},{"annotations":[100375,86508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904257"},{"annotations":[86509,100376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062111"},{"annotations":[97285,100377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071577"}]},"cv_name":"biological_process","definition":"The directed movement of a monoatomic cation, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Monatomic cations (also called simple cations) are positively charged ions consisting of exactly one atom.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion transport","termid":"GO:0006811"}],"gene_count":120,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_00080":null,"SJAG_00133":null,"SJAG_00136":null,"SJAG_00211":null,"SJAG_00212":null,"SJAG_00222":null,"SJAG_00296":null,"SJAG_00321":null,"SJAG_00328":null,"SJAG_00438":null,"SJAG_00516":null,"SJAG_00542":null,"SJAG_00547":null,"SJAG_00601":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00976":null,"SJAG_00985":null,"SJAG_01007":null,"SJAG_01077":null,"SJAG_01078":null,"SJAG_01090":null,"SJAG_01119":null,"SJAG_01129":null,"SJAG_01190":null,"SJAG_01353":null,"SJAG_01355":null,"SJAG_01397":null,"SJAG_01400":null,"SJAG_01406":null,"SJAG_01435":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01493":null,"SJAG_01527":null,"SJAG_01541":null,"SJAG_01639":null,"SJAG_01669":null,"SJAG_01803":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_01990":null,"SJAG_02019":null,"SJAG_02023":null,"SJAG_02105":null,"SJAG_02322":null,"SJAG_02399":null,"SJAG_02440":null,"SJAG_02445":null,"SJAG_02457":null,"SJAG_02473":null,"SJAG_02484":null,"SJAG_02504":null,"SJAG_02532":null,"SJAG_02564":null,"SJAG_02578":null,"SJAG_02598":null,"SJAG_02646":null,"SJAG_02735":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_02782":null,"SJAG_02834":null,"SJAG_02877":null,"SJAG_02883":null,"SJAG_02958":null,"SJAG_02968":null,"SJAG_03079":null,"SJAG_03114":null,"SJAG_03231":null,"SJAG_03399":null,"SJAG_03401":null,"SJAG_03406":null,"SJAG_03490":null,"SJAG_03497":null,"SJAG_03516":null,"SJAG_03528":null,"SJAG_03606":null,"SJAG_03608":null,"SJAG_03631":null,"SJAG_03820":null,"SJAG_03850":null,"SJAG_03866":null,"SJAG_03873":null,"SJAG_03895":null,"SJAG_03925":null,"SJAG_03960":null,"SJAG_04015":null,"SJAG_04028":null,"SJAG_04068":null,"SJAG_04096":null,"SJAG_04122":null,"SJAG_04167":null,"SJAG_04185":null,"SJAG_04246":null,"SJAG_04258":null,"SJAG_04260":null,"SJAG_04471":null,"SJAG_04551":null,"SJAG_04616":null,"SJAG_04668":null,"SJAG_04675":null,"SJAG_04677":null,"SJAG_04698":null,"SJAG_04737":null,"SJAG_04743":null,"SJAG_04757":null,"SJAG_04830":null,"SJAG_04867":null,"SJAG_04892":null,"SJAG_04905":null,"SJAG_04955":null,"SJAG_05204":null,"SJAG_05229":null,"SJAG_05294":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"monoatomic cation transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0072512","GO:0006819","GO:0015674"],"synonyms":[{"name":"cation transport","type":"broad"},{"name":"di-, tri-valent inorganic cation transport","type":"narrow"},{"name":"trivalent inorganic cation transport","type":"narrow"}],"termid":"GO:0006812","terms_by_termid":{"GO:0006825":null,"GO:0015677":null,"GO:0015891":null,"GO:0030001":null,"GO:0032472":null,"GO:0033214":null,"GO:0033215":null,"GO:0034755":null,"GO:0035434":null,"GO:0035444":null,"GO:0035725":null,"GO:0036249":null,"GO:0036376":null,"GO:0036444":null,"GO:0044718":null,"GO:0045016":null,"GO:0048250":null,"GO:0051209":null,"GO:0060003":null,"GO:0061454":null,"GO:0061856":null,"GO:0062111":null,"GO:0070574":null,"GO:0070588":null,"GO:0071421":null,"GO:0071577":null,"GO:0071578":null,"GO:0071805":null,"GO:0097430":null,"GO:0097623":null,"GO:0098655":null,"GO:0098703":null,"GO:0098705":null,"GO:0098716":null,"GO:0120029":null,"GO:0140141":null,"GO:0140146":null,"GO:0140147":null,"GO:0140209":null,"GO:0140466":null,"GO:1902600":null,"GO:1903830":null,"GO:1904257":null,"GO:1905665":null,"GO:1905949":null,"GO:1990573":null,"GO:1990616":null}}


id: PBO:0080831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YAP1 pseudogene 2","termid":"PBO:0080831"}


id: GO:0070866
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein or protein complex in the presence of sterols.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"sterol-dependent protein binding","termid":"GO:0070866"}


id: PBO:0066899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 199","termid":"PBO:0066899"}


id: PBO:0053647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 698","termid":"PBO:0053647"}


id: PBO:0009180
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sir antagonist","termid":"PBO:0009180"}


