# terms

id: PBO:0005764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxamine/pyridoxine/pyridoxal transmembrane transporter (predicted)","termid":"PBO:0005764"}


id: GO:1904660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sensory perception of bitter taste.","definition_xrefs":["PMID:1716172","GOC:TermGenie","GOC:mr","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sensory perception","termid":"GO:0051931"},{"relation_name":"regulates","term_name":"sensory perception of bitter taste","termid":"GO:0050913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sensory perception of bitter taste","synonyms":[{"name":"regulation of bitter taste perception","type":"exact"}],"termid":"GO:1904660"}


id: PBO:0071380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 3","termid":"PBO:0071380"}


id: GO:1903832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to amino acid starvation.","definition_xrefs":["PMID:25002487","GO_REF:0000058","GOC:TermGenie","PMID:7623840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to nutrient levels","termid":"GO:0032107"},{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"regulates","term_name":"cellular response to amino acid starvation","termid":"GO:0034198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to amino acid starvation","termid":"GO:1903832"}


id: PBO:0040515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA wax alcohol acyltransferase 2","termid":"PBO:0040515"}


id: PBO:0082787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the TOM (translocase of outer membrane) complex; responsible for recognition and initial import steps for all mitochondrially directed proteins; promotes assembly and stability of the TOM complex","termid":"PBO:0082787"}


id: FYPO:0004156
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during mitosis is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein level during mitosis","synonyms":[{"name":"decreased protein accumulation during mitosis","type":"related"},{"name":"decreased protein level during mitosis during vegetative growth","type":"exact"},{"name":"decreased protein level during mitotic M phase","type":"related"},{"name":"decreased protein level during mitotic nuclear division","type":"exact"},{"name":"reduced protein level during mitosis","type":"exact"}],"termid":"FYPO:0004156"}


id: PBO:0066073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor responder 2 pseudogene 1","termid":"PBO:0066073"}


id: PBO:0075279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 19 pseudogene 4","termid":"PBO:0075279"}


id: PBO:0079376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 11","termid":"PBO:0079376"}


id: PBO:0036195
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_during_mitotic_G1_phase","termid":"PBO:0036195"}


id: MOD:00583
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a thiophosphono group (H2PO2S, 'thiophosphate').","definition_xrefs":["Unimod:260","PubMed:12110917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur containing modified residue","termid":"MOD:00860"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiophosphorylated residue","synonyms":[{"name":"Thiophospho","type":"related"},{"name":"Thiophosphorylation","type":"related"}],"termid":"MOD:00583"}


id: PBO:0085253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripheral membrane protein of peroxisomes; involved in peroxisomal inheritance; recruitment to peroxisomes is mediated by interaction with Pex3p at the peroxisomal membrane; Inp1p and Pex3p tether peroxisomes to plasma membrane","termid":"PBO:0085253"}


id: PBO:0036134
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_transport_on_microtubule_tip_to_cell_tip_cortex_during_vegetative_growth","termid":"PBO:0036134"}


id: GO:0015995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of chlorophyll, any compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment, from less complex precursors.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin-containing compound biosynthetic process","termid":"GO:0006779"},{"relation_name":"is_a","term_name":"chlorophyll metabolic process","termid":"GO:0015994"},{"relation_name":"is_a","term_name":"pigment biosynthetic process","termid":"GO:0046148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"chlorophyll biosynthetic process","secondary_identifiers":["MetaCyc:CHLOROPHYLL-SYN"],"synonyms":[{"name":"chlorophyll anabolism","type":"exact"},{"name":"chlorophyll biosynthesis","type":"exact"},{"name":"chlorophyll formation","type":"exact"},{"name":"chlorophyll synthesis","type":"exact"}],"termid":"GO:0015995"}


id: GO:0102751
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + a glucosyl-glycogenin = (1,4-alpha-D-glucosyl)n-glucosyl glucogenin + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-alpha-D-glucose:glucosyl-glycogenin alpha-D-glucosyltransferase activity (obsolete GO:0102751)","termid":"GO:0102751"}


id: GO:0018174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The linkage of protein to heme P460.","definition_xrefs":["RESID:AA0271","RESID:AA0266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-heme linkage","termid":"GO:0017003"},{"relation_name":"is_a","term_name":"cytochrome complex assembly","termid":"GO:0017004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"protein-heme P460 linkage","synonyms":[{"name":"protein-haem P460 linkage","type":"exact"}],"termid":"GO:0018174"}


id: PBO:0060286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain 3","termid":"PBO:0060286"}


id: PR:Q10109
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lem2 gene.","definition_xrefs":["UniProtKB:Q10109","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lap-Emerin-Man domain protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.10","synonyms":[{"name":"LEM domain protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lem2","type":"exact"}],"termid":"PR:Q10109"}


id: PBO:0011517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase, Arb family ABCF1-like (predicted)","termid":"PBO:0011517"}


id: GO:0051407
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glycerone phosphate(out) + phosphate(in) = glycerone phosphate(in) + phosphate(out).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"organophosphate:phosphate antiporter activity","termid":"GO:0015315"},{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"},{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"glycerone phosphate:phosphate antiporter activity","synonyms":[{"name":"dihydroxyacetone-phosphate:inorganic phosphate antiporter activity","type":"exact"},{"name":"glycerone phosphate:inorganic phosphate antiporter activity","type":"exact"}],"termid":"GO:0051407"}


id: PBO:0110329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP3S1 pseudogene 1","termid":"PBO:0110329"}


id: GO:0110096
data:
  {"annotated_genes":["SJAG_02960","SJAG_05256","SJAG_02010","SJAG_01457"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108790],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110095"},{"annotations":[101088],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140041"},{"annotations":[91597,99542],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0046294"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an aldehyde stimulus.","definition_xrefs":["PMID:25656103","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01457":null,"SJAG_02010":null,"SJAG_02960":null,"SJAG_05256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to aldehyde","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110096","terms_by_termid":{"GO:0046294":null,"GO:0110095":null,"GO:0140041":null}}


id: PBO:0040426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit e1 pseudogene 3","termid":"PBO:0040426"}


id: PBO:0042951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 5","termid":"PBO:0042951"}


id: GO:1905112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of centromere clustering at the nuclear envelope.","definition_xrefs":["GOC:TermGenie","PMID:22375062","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of centromere clustering at the mitotic nuclear envelope (obsolete GO:1905112)","synonyms":[{"name":"regulation of centromere clustering at the nuclear periphery","type":"exact"},{"name":"regulation of centromere-SPB clustering","type":"related"},{"name":"regulation of kinetochore clustering at SPB","type":"related"},{"name":"regulation of kinetochore clustering at spindle pole body","type":"related"},{"name":"regulation of kinetochore clustering at the old mitotic spindle pole body","type":"related"},{"name":"regulation of kinetochore localization at spindle pole body","type":"related"},{"name":"regulation of rabl configuration","type":"related"}],"termid":"GO:1905112"}


id: PBO:0074457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingomyelin phosphodiesterase 2","termid":"PBO:0074457"}


id: PBO:0001252
data:
  {"annotation_feature_type":"gene","cv_name":"ex_tools","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deletion solves arginine-conversion problem","termid":"PBO:0001252"}


id: GO:0015447
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete type II protein secretor activity (obsolete GO:0015447)","synonyms":[{"name":"type II protein secretor activity","type":"exact"}],"termid":"GO:0015447"}


id: PBO:0078330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon CTC) 1-2","termid":"PBO:0078330"}


id: PBO:0057830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3148","termid":"PBO:0057830"}


id: SO:0000775
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An adaptive island is a genomic island that provides an adaptive advantage to the host.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genomic_island","termid":"SO:0000772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptive_island","synonyms":[{"name":"adaptive island","type":"exact"}],"termid":"SO:0000775"}


id: PBO:0028797
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_replication_fork_arrest_at_rDNA_repeats","termid":"PBO:0028797"}


id: GO:0051702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An interaction between two organisms living together in more or less intimate association. The term symbiont is used for the smaller (macro) of the two members of a symbiosis; the various forms of symbiosis include parasitism, commensalism and mutualism.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in symbiotic interaction","termid":"GO:0044403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"biological process involved in interaction with symbiont","synonyms":[{"name":"interaction with symbiont","type":"related"}],"termid":"GO:0051702"}


id: PBO:0085999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; similar to Listeria monocytogenes major sigma factor (rpoD gene product); the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0085999"}


id: PBO:0038363
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-condition_ameliorated_by","termid":"PBO:0038363"}


id: GO:0005061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete aryl hydrocarbon receptor nuclear translocator activity (obsolete GO:0005061)","synonyms":[{"name":"aryl hydrocarbon receptor nuclear translocator activity","type":"exact"}],"termid":"GO:0005061"}


id: PBO:0067009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 16, pseudogene","termid":"PBO:0067009"}


id: GO:0072507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of divalent cations within an organism or cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete divalent inorganic cation homeostasis (obsolete GO:0072507)","termid":"GO:0072507"}


id: PBO:0109016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 17, pseudogene","termid":"PBO:0109016"}


id: PBO:0053558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 566","termid":"PBO:0053558"}


id: PBO:0038327
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-under-expressed_in","termid":"PBO:0038327"}


id: PBO:0031106
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_ionizing_radiation_during_vegetative_growth","termid":"PBO:0031106"}


id: PBO:0004908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation specific protein Spo2","termid":"PBO:0004908"}


id: PBO:0067749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 48","termid":"PBO:0067749"}


id: GO:0089714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-alpha-D-mannosamine + 2 NAD+ + H2O = UDP-N-acetyl-alpha-D-mannosaminuronate + 2 NADH + 2 H+.","definition_xrefs":["EC:1.1.1.336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"UDP-N-acetyl-D-mannosamine dehydrogenase activity","secondary_identifiers":["RHEA:25780"],"termid":"GO:0089714"}


id: PR:Q9USY0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug131 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USY0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 131 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1861.06c","synonyms":[{"name":"Spom972h-mug131","type":"exact"}],"termid":"PR:Q9USY0"}


id: PBO:0044725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 13 (pseudogene)","termid":"PBO:0044725"}


id: GO:0045230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the capsule, a protective structure surrounding some species of bacteria and fungi.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external encapsulating structure organization","termid":"GO:0045229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"capsule organization","synonyms":[{"name":"capsule organisation","type":"exact"},{"name":"capsule organization and biogenesis","type":"related"}],"termid":"GO:0045230"}


id: PBO:0004217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex subunit Tfb5 (predicted)","termid":"PBO:0004217"}


id: FYPO:0007248
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the duration of cell cycle arrest or delay due to regulation by the mitotic G2 DNA damage checkpoint is shorter than in wild type during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah","PMID:9042863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle regulation during cellular response to ionizing radiation","termid":"FYPO:0003489"},{"relation_name":"is_a","term_name":"decreased duration of mitotic G2 DNA damage checkpoint","termid":"FYPO:0004870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000298","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"decreased duration of mitotic G2 DNA damage checkpoint during cellular response to ionizing radiation","synonyms":[{"name":"advanced mitotic G2 DNA damage checkpoint deactivation during cellular response to ionizing radiation","type":"exact"},{"name":"decreased duration of mitotic G2 DNA damage checkpoint during cellular response to IR","type":"exact"}],"termid":"FYPO:0007248"}


id: GO:0044549
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a GTP cyclohydrolase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"GTP cyclohydrolase binding","secondary_identifiers":["GO:0043106"],"synonyms":[{"name":"GTP cyclohydrolase I binding","type":"narrow"}],"termid":"GO:0044549"}


id: GO:0106291
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADH + 2 O2 = H+ + NAD+ + 2 superoxide.","definition_xrefs":["RHEA:63184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"superoxide-generating NAD(P)H oxidase activity","termid":"GO:0016175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"superoxide-generating NADH oxidase activity","termid":"GO:0106291"}


id: GO:0000394
data:
  {"annotated_genes":["SJAG_03913","SJAG_00956","SJAG_03328","SJAG_01260","SJAG_04907","SJAG_01791","SJAG_00754"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89518,86703,91711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006388"},{"annotations":[97395,101970,113747,96858],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000379"}]},"cv_name":"biological_process","definition":"Splicing of RNA via recognition of the folded RNA structure that brings the 5' and 3' splice sites into proximity and cleavage of the RNA at both the 3' and 5' splice sites by an endonucleolytic mechanism, followed by ligation of the exons.","definition_xrefs":["ISBN:0879695897","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA splicing","termid":"GO:0008380"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00754":null,"SJAG_00956":null,"SJAG_01260":null,"SJAG_01791":null,"SJAG_03328":null,"SJAG_03913":null,"SJAG_04907":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"RNA splicing, via endonucleolytic cleavage and ligation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mRNA splicing","type":"broad"}],"termid":"GO:0000394","terms_by_termid":{"GO:0000379":null,"GO:0006388":null}}


id: GO:0032073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the rate of a restriction endodeoxyribonuclease activity, the catalysis of endonucleolytic cleavage of DNA in a site-specific manner, resulting in double-strand breaks.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of restriction endodeoxyribonuclease activity","termid":"GO:0032072"},{"relation_name":"is_a","term_name":"negative regulation of endodeoxyribonuclease activity","termid":"GO:0032078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"negative regulation of restriction endodeoxyribonuclease activity","synonyms":[{"name":"down regulation of restriction endodeoxyribonuclease activity","type":"exact"},{"name":"down-regulation of restriction endodeoxyribonuclease activity","type":"exact"},{"name":"downregulation of restriction endodeoxyribonuclease activity","type":"exact"},{"name":"inhibition of restriction endodeoxyribonuclease activity","type":"narrow"},{"name":"restriction alleviation","type":"narrow"},{"name":"restriction endodeoxyribonuclease inhibitor","type":"related"},{"name":"restriction enzyme inhibitor","type":"related"}],"termid":"GO:0032073"}


id: GO:1900745
data:
  {"annotated_genes":["SJAG_00318","SJAG_02135","SJAG_03828","SJAG_00027","SJAG_06621","SJAG_06592","SJAG_06622","SJAG_01587","SJAG_02945","SJAG_03903","SJAG_02183","SJAG_01199"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91317,104991,104992,104993,104994,104995,104996,104997,107885,108541,113443,114343],"is_not":false,"summary":null,"term":"GO:1900745"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of p38MAPK cascade.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of MAPK cascade","termid":"GO:0043410"},{"relation_name":"is_a","term_name":"regulation of p38MAPK cascade","termid":"GO:1900744"},{"relation_name":"positively_regulates","term_name":"p38MAPK cascade","termid":"GO:0038066"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00318":null,"SJAG_01199":null,"SJAG_01587":null,"SJAG_02135":null,"SJAG_02183":null,"SJAG_02945":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_06592":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of p38MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of p38 MAPK cascade","type":"exact"},{"name":"activation of p38 cascade","type":"exact"},{"name":"activation of p38MAPK cascade","type":"narrow"},{"name":"positive regulation of osmosensory signaling MAPK cascade","type":"narrow"},{"name":"positive regulation of p38 MAPK cascade","type":"exact"},{"name":"positive regulation of p38 cascade","type":"exact"},{"name":"up regulation of p38 MAPK cascade","type":"exact"},{"name":"up regulation of p38 cascade","type":"exact"},{"name":"up regulation of p38MAPK cascade","type":"exact"},{"name":"up-regulation of p38 MAPK cascade","type":"exact"},{"name":"up-regulation of p38 cascade","type":"exact"},{"name":"up-regulation of p38MAPK cascade","type":"exact"},{"name":"upregulation of p38 MAPK cascade","type":"exact"},{"name":"upregulation of p38 cascade","type":"exact"},{"name":"upregulation of p38MAPK cascade","type":"exact"}],"termid":"GO:1900745","terms_by_termid":{"GO:1900745":null}}


id: PBO:0062484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily A member 3 pseudogene","termid":"PBO:0062484"}


id: PBO:0078952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon TCT) 3-2","termid":"PBO:0078952"}


id: GO:1902634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate.","definition_xrefs":["PMID:22562153","GO_REF:0000068","GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol catabolic process","termid":"GO:0031161"},{"relation_name":"is_a","term_name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate metabolic process","termid":"GO:1902633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","synonyms":[{"name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate breakdown","type":"exact"},{"name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolism","type":"exact"},{"name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate degradation","type":"exact"}],"termid":"GO:1902634"}


id: GO:0031891
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 vasoactive intestinal polypeptide receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasoactive intestinal polypeptide receptor binding","termid":"GO:0031890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"type 1 vasoactive intestinal polypeptide receptor binding","synonyms":[{"name":"type 1 vasoactive intestinal polypeptide receptor ligand","type":"narrow"},{"name":"type 2 PACAP receptor binding","type":"exact"}],"termid":"GO:0031891"}


id: PBO:0065665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type N2","termid":"PBO:0065665"}


id: GO:0006257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dUDP, deoxyuridine (5'-)diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside diphosphate catabolic process","termid":"GO:0009198"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide catabolic process","termid":"GO:0009223"},{"relation_name":"is_a","term_name":"dUDP metabolic process","termid":"GO:0046077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"dUDP catabolic process","synonyms":[{"name":"dUDP breakdown","type":"exact"},{"name":"dUDP catabolism","type":"exact"},{"name":"dUDP degradation","type":"exact"}],"termid":"GO:0006257"}


id: GO:1900965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methanophenazine metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"methanophenazine metabolic process","termid":"GO:1900629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of methanophenazine metabolic process","synonyms":[{"name":"regulation of methanophenazine metabolism","type":"exact"}],"termid":"GO:1900965"}


id: GO:1904252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of bile acid metabolic process.","definition_xrefs":["GOC:bf","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"negative regulation of steroid metabolic process","termid":"GO:0045939"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of bile acid metabolic process","termid":"GO:1904251"},{"relation_name":"negatively_regulates","term_name":"bile acid metabolic process","termid":"GO:0008206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"negative regulation of bile acid metabolic process","synonyms":[{"name":"down regulation of bile acid metabolic process","type":"exact"},{"name":"down regulation of bile acid metabolism","type":"exact"},{"name":"down-regulation of bile acid metabolic process","type":"exact"},{"name":"down-regulation of bile acid metabolism","type":"exact"},{"name":"downregulation of bile acid metabolic process","type":"exact"},{"name":"downregulation of bile acid metabolism","type":"exact"},{"name":"inhibition of bile acid metabolic process","type":"narrow"},{"name":"inhibition of bile acid metabolism","type":"narrow"},{"name":"negative regulation of bile acid metabolism","type":"exact"}],"termid":"GO:1904252"}


id: GO:0002660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of peripheral tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tolerance induction dependent upon immune response","termid":"GO:0002654"},{"relation_name":"is_a","term_name":"regulation of peripheral tolerance induction","termid":"GO:0002658"},{"relation_name":"positively_regulates","term_name":"peripheral tolerance induction","termid":"GO:0002465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of peripheral tolerance induction","synonyms":[{"name":"activation of peripheral tolerance induction","type":"narrow"},{"name":"stimulation of peripheral tolerance induction","type":"narrow"},{"name":"up regulation of peripheral tolerance induction","type":"exact"},{"name":"up-regulation of peripheral tolerance induction","type":"exact"},{"name":"upregulation of peripheral tolerance induction","type":"exact"}],"termid":"GO:0002660"}


id: PBO:0059899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 22","termid":"PBO:0059899"}


id: PBO:0061059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrilase family member 2","termid":"PBO:0061059"}


id: GO:0046270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 4-toluenecarboxylate, 4-methylbenzenecarboxylate, the anion of carboxylic acid attached to a methylbenzene molecule.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-toluenecarboxylate biosynthetic process (obsolete GO:0046270)","synonyms":[{"name":"4-toluenecarboxylate anabolism","type":"exact"},{"name":"4-toluenecarboxylate biosynthesis","type":"exact"},{"name":"4-toluenecarboxylate biosynthetic process","type":"exact"},{"name":"4-toluenecarboxylate formation","type":"exact"},{"name":"4-toluenecarboxylate synthesis","type":"exact"}],"termid":"GO:0046270"}


id: PBO:0086380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ATP-dependent permease of the ABC transporter family","termid":"PBO:0086380"}


id: PBO:0002096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AdoMet dependent proline dimethyltransferase involved in translation Tea1 (predicted)","termid":"PBO:0002096"}


id: FYPO:0006704
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of sedoheptulose-7-phosphate measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular sedoheptulose-7-phosphate level","synonyms":[{"name":"decreased cellular sedoheptulose-7-phosphate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular sedoheptulose-7-phosphate level during vegetative growth","type":"exact"},{"name":"reduced cellular sedoheptulose-7-phosphate level","type":"exact"}],"termid":"FYPO:0006704"}


id: GO:0034543
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5-aminosalicylate + O2 = cis-4-amino-6-carboxy-2-oxo-hexa-3,5-dienoate.","definition_xrefs":["UM-BBD_reactionID:r0809"],"gene_count":0,"genotype_count":0,"name":"obsolete 5-aminosalicylate dioxygenase activity (obsolete GO:0034543)","termid":"GO:0034543"}


id: GO:0070851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a growth factor receptor.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"growth factor receptor binding","termid":"GO:0070851"}


id: PBO:0034444
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_endosome_to_Golgi_transport","termid":"PBO:0034444"}


id: PBO:0081092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type containing 20 pseudogene 1","termid":"PBO:0081092"}


id: PBO:0059030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 20","termid":"PBO:0059030"}


id: GO:1990782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to protein tyrosine kinase.","definition_xrefs":["PMID:25499537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase binding","termid":"GO:0019901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"protein tyrosine kinase binding","synonyms":[{"name":"tyrosine kinase binding","type":"exact"}],"termid":"GO:1990782"}


id: PBO:0040941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 12","termid":"PBO:0040941"}


id: PBO:0077852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triosephosphate isomerase 1 pseudogene 3","termid":"PBO:0077852"}


id: PBO:0004591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S18 (predicted)","termid":"PBO:0004591"}


id: PBO:0083862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Farnesyl pyrophosphate synthetase; has both dimethylallyltranstransferase and geranyltranstransferase activities; catalyzes the formation of C15 farnesyl pyrophosphate units for isoprenoid and sterol biosynthesis","termid":"PBO:0083862"}


id: PBO:0045196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member B7","termid":"PBO:0045196"}


id: GO:0019530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving taurine (2-aminoethanesulfonic acid), a sulphur-containing amino acid derivative important in the metabolism of fats.","definition_xrefs":["GOC:jl","ISBN:0198600461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkanesulfonate metabolic process","termid":"GO:0019694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"taurine metabolic process","synonyms":[{"name":"taurine metabolism","type":"exact"}],"termid":"GO:0019530"}


id: GO:0061508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group into CDP to produce a CTP.","definition_xrefs":["PMID:7499258"],"gene_count":0,"genotype_count":0,"name":"obsolete CDP phosphorylation (obsolete GO:0061508)","termid":"GO:0061508"}


id: PBO:0083221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps verified gene RPB3/YIL021W; identified by gene-trapping, expression analysis, and genome-wide homology searching","termid":"PBO:0083221"}


id: PBO:0050855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interactor of little elongation complex ELL subunit 2","termid":"PBO:0050855"}


id: FYECO:0000287
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which nigericin was added to the medium or assay buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ nigericin","termid":"FYECO:0000287"}


id: GO:0010088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the principal food-conducting tissue of a vascular plant.","definition_xrefs":["GOC:tb","ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phloem or xylem histogenesis","termid":"GO:0010087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phloem development","synonyms":[{"name":"phloem histogenesis","type":"exact"}],"termid":"GO:0010088"}


id: MOD:00866
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to one of several dihydroxylated proline residues, such as (2S,3R,4R)-3,4-dihydroxyproline or (2S,3R,4S)-3,4-dihydroxyproline.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroxylated residue","termid":"MOD:00428"},{"relation_name":"is_a","term_name":"hydroxylated proline","termid":"MOD:00678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroxylated proline","synonyms":[{"name":"Hy2Pro","type":"exact"}],"termid":"MOD:00866"}


id: PBO:0081868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 807, pseudogene","termid":"PBO:0081868"}


id: GO:0017184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of peptidyl-diphthamide, a modified histidine residue.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-diphthamide catabolic process (obsolete GO:0017184)","synonyms":[{"name":"peptidyl-diphthamide breakdown","type":"exact"},{"name":"peptidyl-diphthamide catabolism","type":"exact"},{"name":"peptidyl-diphthamide degradation","type":"exact"}],"termid":"GO:0017184"}


id: PBO:0029815
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population_after_spore_germination,_single_or_double_cell_division,_abnormal_cell_shape_(obsolete_FYPO:0002422)","termid":"PBO:0029815"}


id: GO:0047654
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an S-alkyl-L-cysteine S-oxide = an alkyl sulfenate + 2-aminoacrylate.","definition_xrefs":["EC:4.4.1.4","MetaCyc:ALLIIN-LYASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"alliin lyase activity","secondary_identifiers":["RHEA:20141"],"synonyms":[{"name":"L-cysteine sulfoxide lyase activity","type":"related"},{"name":"S-alkyl-L-cysteine S-oxide alkyl-sulfenate-lyase (2-aminoacrylate-forming)","type":"related"},{"name":"S-alkylcysteine sulfoxide lyase activity","type":"related"},{"name":"alkylcysteine sulfoxide lyase activity","type":"related"},{"name":"alliin alkyl-sulfenate-lyase activity","type":"related"},{"name":"alliinase activity","type":"related"},{"name":"cysteine sulfoxide lyase activity","type":"related"},{"name":"cysteine sulphoxide lyase activity","type":"related"}],"termid":"GO:0047654"}


id: _global:towards
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"q towards e2 if and only if q is a relational quality such that q inheres-in some e, and e != e2 and q is dependent on e2","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"towards","secondary_identifiers":["RO:0002503"],"termid":"_global:towards"}


id: PBO:0033772
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-pointed_nucleus_during_mitotic_interphase","termid":"PBO:0033772"}


id: GO:0015059
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete blue-sensitive opsin (obsolete GO:0015059)","synonyms":[{"name":"blue-sensitive opsin","type":"exact"}],"termid":"GO:0015059"}


id: PBO:0067777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 77","termid":"PBO:0067777"}


id: PBO:0061226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NODAL modulator 2","termid":"PBO:0061226"}


id: PBO:0111337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex, symplekin scaffold subunit Pta1","termid":"PBO:0111337"}


id: PBO:0053044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"La ribonucleoprotein 4","termid":"PBO:0053044"}


id: FYPO:0007830
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein located in the medial cortical nodes occupies an area with a smaller radius than normal during interphase of the mitotic cell cycle. The nodes are \\\"precursor\\\" nodes that exist before the contractile ring is formed.","definition_xrefs":["PMID:33496728","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortical node","termid":"FYPO:0003289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"narrow protein radial density distribution in medial cortical node during mitotic interphase","synonyms":[{"name":"decreased protein RDD in medial cortical node during mitotic interphase","type":"exact"},{"name":"decreased protein radial density distribution in medial cortical node during mitotic interphase","type":"exact"},{"name":"narrow protein RDD in medial cortical node during mitotic interphase","type":"exact"},{"name":"narrow protein radial density distribution in medial cortical P-node","type":"related"},{"name":"narrow protein radial density distribution in medial cortical node during interphase of mitotic cell cycle","type":"exact"},{"name":"narrow protein radial density distribution in medial cortical node during mitotic interphase during vegetative growth","type":"exact"},{"name":"narrow protein radial density distribution in medial cortical precursor node","type":"related"},{"name":"narrow radial density distribution of protein in medial cortical node during mitotic interphase","type":"exact"},{"name":"reduced protein radial density distribution in medial cortical node during mitotic interphase","type":"exact"}],"termid":"FYPO:0007830"}


id: GO:0030705
data:
  {"annotated_genes":["SJAG_04597","SJAG_00851","SJAG_01546","SJAG_02336","SJAG_01211","SJAG_02045","SJAG_02731","SJAG_03673","SJAG_00140","SJAG_00918","SJAG_01224","SJAG_03437","SJAG_05319","SJAG_03011","SJAG_01613","SJAG_02561","SJAG_01775","SJAG_00332","SJAG_01370","SJAG_04143","SJAG_04001","SJAG_01662","SJAG_02737","SJAG_01371","SJAG_01297","SJAG_03073","SJAG_00368","SJAG_02431","SJAG_02286","SJAG_03540","SJAG_02761","SJAG_05185","SJAG_01863","SJAG_00397","SJAG_00938","SJAG_00113","SJAG_05220","SJAG_05266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87437,113017,87047,99319,83831,107108,107462,87889,110012,107283,91268,97486,93638,99028,96785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030989"},{"annotations":[107285,102632,97487],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032118"},{"annotations":[95293,93712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090561"},{"annotations":[87439,93640,91270,95294,83835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000743"},{"annotations":[90472],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902854"},{"annotations":[99815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099117"},{"annotations":[96448,104319,114728,99968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"},{"annotations":[85815,104936,110160,112992,103557,92841,94688,96579,85208,87035,105943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"},{"annotations":[87201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010970"},{"annotations":[104193,112257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030050"}]},"cv_name":"biological_process","definition":"The directed movement of substances along cytoskeletal fibers such as microfilaments or microtubules within a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00332":null,"SJAG_00368":null,"SJAG_00397":null,"SJAG_00851":null,"SJAG_00918":null,"SJAG_00938":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01370":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01662":null,"SJAG_01775":null,"SJAG_01863":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02431":null,"SJAG_02561":null,"SJAG_02731":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_03011":null,"SJAG_03073":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_03673":null,"SJAG_04001":null,"SJAG_04143":null,"SJAG_04597":null,"SJAG_05185":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"cytoskeleton-dependent intracellular transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030705","terms_by_termid":{"GO:0000743":null,"GO:0010970":null,"GO:0030050":null,"GO:0030989":null,"GO:0032118":null,"GO:0090561":null,"GO:0099117":null,"GO:0140210":null,"GO:1902854":null,"GO:1990976":null}}


id: FYPO:0005465
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the establishment or maintenance of cell polarity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal cell polarity","synonyms":[{"name":"normal cell polarity during mitotic cell cycle","type":"related"},{"name":"normal cell polarity during vegetative growth","type":"exact"},{"name":"normal cell polarity process","type":"exact"},{"name":"normal establishment or maintenance of cell polarity","type":"exact"}],"termid":"FYPO:0005465"}


id: PBO:0046183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor for RNA polymerase II 2 pseudogene 4","termid":"PBO:0046183"}


id: GO:1903436
data:
  {"annotated_genes":["SJAG_04597","SJAG_00514","SJAG_00082","SJAG_03048","SJAG_02392","SJAG_01805","SJAG_03936","SJAG_03704","SJAG_01114","SJAG_04468","SJAG_03631","SJAG_04776","SJAG_00845","SJAG_03342","SJAG_01188","SJAG_02838","SJAG_05290","SJAG_04666","SJAG_02592","SJAG_03581","SJAG_03309","SJAG_02380","SJAG_01787","SJAG_00256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[99764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903472"},{"annotations":[98434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"},{"annotations":[86063,90469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[109425,106578,90639,90470,83611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903473"},{"annotations":[91915,115403,99769,86829,106822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903617"},{"annotations":[109426,89860,85305,85936,113960,111538,101224,102429,103096,88466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[88467,83612,90473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905758"},{"annotations":[90435,115472,89866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903499"},{"annotations":[83926,107436,97442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902472"},{"annotations":[113962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140279"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic cytokinetic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokinetic process","termid":"GO:0032954"},{"relation_name":"is_a","term_name":"regulation of mitotic cytokinesis","termid":"GO:1902412"},{"relation_name":"regulates","term_name":"mitotic cytokinetic process","termid":"GO:1902410"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00256":null,"SJAG_00514":null,"SJAG_00845":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01787":null,"SJAG_01805":null,"SJAG_02380":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_02838":null,"SJAG_03048":null,"SJAG_03309":null,"SJAG_03342":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03704":null,"SJAG_03936":null,"SJAG_04468":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000281"}],"interesting_parent_ids":["GO:0008150","GO:0000281","GO:0007049"],"is_obsolete":false,"name":"regulation of mitotic cytokinetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null,"PMID:32915139":null},"termid":"GO:1903436","terms_by_termid":{"GO:0120306":null,"GO:0140279":null,"GO:0140281":null,"GO:1902472":null,"GO:1903472":null,"GO:1903473":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:1903617":null,"GO:1905757":null,"GO:1905758":null}}


id: PBO:0000368
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally represses str1","termid":"PBO:0000368"}


id: GO:0035879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of lactate across a plasma membrane.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate transmembrane transport","termid":"GO:0035873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"plasma membrane lactate transport","synonyms":[{"name":"lactate plasma membrane transport","type":"exact"}],"termid":"GO:0035879"}


id: SO:0000064
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000064 gene_by_transcript_attribute (obsolete SO:0000064)","termid":"SO:0000064"}


id: GO:0009563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an uncellularized nucleus cellularizes and acquires the specialized features of a synergid cell.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"megagametogenesis","termid":"GO:0009561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"synergid differentiation","synonyms":[{"name":"synergid cell differentiation","type":"exact"}],"termid":"GO:0009563"}


id: PBO:0051441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-26 (pseudogene)","termid":"PBO:0051441"}


id: GO:1904014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a serotonin stimulus.","definition_xrefs":["PMID:1505525","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to monoamine","termid":"GO:0071867"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to serotonin","termid":"GO:1904014"}


id: PBO:0113346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for delivery of copper to Cox1p; mitochondrial inner membrane protein; involved in oxidative stress response; association with mitochondrial ribosomes suggests that copper delivery may occur during translation of Cox1p","termid":"PBO:0113346"}


id: PBO:0074107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 28 member 3","termid":"PBO:0074107"}


id: GO:0120212
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A centrosome-based structure consisting of two cylindrical microtubule-based centrioles and associated components which anchors the flagellum to the sperm head.","definition_xrefs":["PMID:30032984","GOC:krc","PMID:24415959"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sperm head-tail coupling apparatus","secondary_identifiers":["MP:0009830"],"synonyms":[{"name":"HTCA","type":"related"},{"name":"head-tail coupling apparatus","type":"exact"},{"name":"implantation fossa","type":"related"},{"name":"sperm connecting piece","type":"related"},{"name":"sperm neck","type":"related"}],"termid":"GO:0120212"}


id: PBO:0079046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 2-1","termid":"PBO:0079046"}


id: GO:0009044
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->4)-beta-D-xylans so as to remove successive D-xylose residues from the non-reducing termini.","definition_xrefs":["EC:3.2.1.37"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylanase activity","termid":"GO:0097599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"xylan 1,4-beta-xylosidase activity","secondary_identifiers":["MetaCyc:3.2.1.37-RXN"],"synonyms":[{"name":"1,4-beta-D-xylan xylohydrolase activity","type":"related"},{"name":"beta-D-xylopyranosidase activity","type":"related"},{"name":"beta-xylosidase activity","type":"related"},{"name":"exo-1,4-beta-D-xylosidase activity","type":"related"},{"name":"exo-1,4-beta-xylosidase activity","type":"related"},{"name":"exo-1,4-xylosidase activity","type":"related"},{"name":"xylobiase activity","type":"related"}],"termid":"GO:0009044"}


id: GO:0044296
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The terminal specialization found in some types of dendrites which consists of numerous small terminal branches, giving the dendrite a tufted appearance.","definition_xrefs":["NIF_Subcellular:sao1340260079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite terminus","termid":"GO:0044292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic tuft","synonyms":[{"name":"dendrite tuft","type":"exact"}],"termid":"GO:0044296"}


id: FYPO:0007398
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which signaling via a MAP kinase cascade that is activated in response to stress is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0051403","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to stress during vegetative growth","termid":"FYPO:0000968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0000298"],"is_obsolete":false,"name":"normal stress-activated MAPK cascade","synonyms":[{"name":"normal MAPK signalling in response to stress","type":"exact"},{"name":"normal stress-activated MAPK cascade during mitotic cell cycle","type":"related"},{"name":"normal stress-activated MAPK cascade during vegetative growth","type":"exact"},{"name":"normal stress-activated MAPK signaling pathway","type":"exact"}],"termid":"FYPO:0007398"}


id: FYPO:0001712
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of coenzyme Q10 measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased cellular coenzyme Q10 level","termid":"FYPO:0006978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"coenzyme Q10 absent from cell","synonyms":[{"name":"UQ-10 absent from cell","type":"exact"},{"name":"coenzyme Q10 absent from cell during mitotic cell cycle","type":"related"},{"name":"coenzyme Q10 absent from cell during vegetative growth","type":"exact"},{"name":"ubiquinone 10 absent from cell","type":"exact"}],"termid":"FYPO:0001712"}


id: PBO:0084636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methyltransferase that methylates residue G1575 of 18S rRNA; required for rRNA processing and nuclear export of 40S ribosomal subunits independently of methylation activity; functions with DEAH-box RNA helicase Ecm16p; diploid mutant displays random budding pattern; functional homolog of human WBSCR22","termid":"PBO:0084636"}


id: PBO:0058520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5708","termid":"PBO:0058520"}


id: FYPO:0003085
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at the mating-type locus occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork arrest at mating-type locus","termid":"FYPO:0003083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000293","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased replication fork arrest at mating-type locus","synonyms":[{"name":"decreased replication fork arrest at mating-type locus during mitotic cell cycle","type":"related"},{"name":"decreased replication fork arrest at mating-type locus during vegetative growth","type":"exact"},{"name":"reduced replication fork arrest at mating-type locus","type":"exact"}],"termid":"FYPO:0003085"}


id: GO:0060504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate or frequency of epithelial cell proliferation that results in the lung bud increasing in size radially.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation involved in lung morphogenesis","termid":"GO:0060501"},{"relation_name":"is_a","term_name":"positive regulation of branching involved in lung morphogenesis","termid":"GO:0061047"},{"relation_name":"positively_regulates","term_name":"epithelial cell proliferation involved in lung bud dilation","termid":"GO:0060505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epithelial cell proliferation involved in lung bud dilation","termid":"GO:0060504"}


id: GO:0051302
data:
  {"annotated_genes":["SJAG_04597","SJAG_01456","SJAG_02232","SJAG_01863","SJAG_00256","SJAG_03376","SJAG_02169","SJAG_03692","SJAG_01114","SJAG_03508","SJAG_01386","SJAG_03353","SJAG_02380","SJAG_03592","SJAG_01805","SJAG_01790","SJAG_03048","SJAG_04455","SJAG_04943","SJAG_04551","SJAG_02392","SJAG_04468","SJAG_03936","SJAG_00514","SJAG_02592","SJAG_02807","SJAG_03887","SJAG_03309","SJAG_05290","SJAG_00082","SJAG_02514","SJAG_06270","SJAG_03704","SJAG_01464","SJAG_00526","SJAG_00845","SJAG_04776","SJAG_03631","SJAG_02838","SJAG_01188","SJAG_03342","SJAG_01837","SJAG_01787","SJAG_04412","SJAG_00883","SJAG_04666","SJAG_03681","SJAG_03581","SJAG_00229"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010974"},{"annotations":[98429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[99764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903472"},{"annotations":[98207,95728,103146,88893,98430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902413"},{"annotations":[98434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"},{"annotations":[111970,103147,86786,87779,97332,103593,89511,95729,106224,88978,101081,91703,95648,88894,103286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"},{"annotations":[86063,90469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[83611,109425,90470,106578,90639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903473"},{"annotations":[86064,89859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903490"},{"annotations":[86829,99769,115403,91915,106822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903617"},{"annotations":[103096,89860,102429,111538,113960,88466,101224,85305,109426,85936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[90473,88467,83612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905758"},{"annotations":[89866,90435,115472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903499"},{"annotations":[103193,85882,97000,99557,87891,83614,105263,113591,109428,112756,114755,111539,86069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902412"},{"annotations":[83926,97442,107436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902472"},{"annotations":[113962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140279"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the physical partitioning and separation of a cell into daughter cells.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cell division","termid":"GO:0051301"}],"gene_count":49,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00229":null,"SJAG_00256":null,"SJAG_00514":null,"SJAG_00526":null,"SJAG_00845":null,"SJAG_00883":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01386":null,"SJAG_01456":null,"SJAG_01464":null,"SJAG_01787":null,"SJAG_01790":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01863":null,"SJAG_02169":null,"SJAG_02232":null,"SJAG_02380":null,"SJAG_02392":null,"SJAG_02514":null,"SJAG_02592":null,"SJAG_02807":null,"SJAG_02838":null,"SJAG_03048":null,"SJAG_03309":null,"SJAG_03342":null,"SJAG_03353":null,"SJAG_03376":null,"SJAG_03508":null,"SJAG_03581":null,"SJAG_03592":null,"SJAG_03631":null,"SJAG_03681":null,"SJAG_03692":null,"SJAG_03704":null,"SJAG_03887":null,"SJAG_03936":null,"SJAG_04412":null,"SJAG_04455":null,"SJAG_04468":null,"SJAG_04551":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_04943":null,"SJAG_05290":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell division","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null,"PMID:32915139":null},"termid":"GO:0051302","terms_by_termid":{"GO:0010974":null,"GO:0031030":null,"GO:0120306":null,"GO:0140279":null,"GO:0140281":null,"GO:1902412":null,"GO:1902413":null,"GO:1902472":null,"GO:1903472":null,"GO:1903473":null,"GO:1903490":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:1903617":null,"GO:1905757":null,"GO:1905758":null}}


id: GO:0016912
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete SAP kinase 5 activity (obsolete GO:0016912)","synonyms":[{"name":"SAP kinase 5 activity","type":"exact"},{"name":"SAPK5","type":"exact"}],"termid":"GO:0016912"}


id: PBO:0057839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3155a","termid":"PBO:0057839"}


id: PBO:0070635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 6","termid":"PBO:0070635"}


id: SO:0000316
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A contiguous sequence which begins with, and includes, a start codon and ends with, and includes, a stop codon.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_region","termid":"SO:0000836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS","synonyms":[{"name":"INSDC_feature:CDS","type":"exact"},{"name":"coding sequence","type":"exact"},{"name":"coding_sequence","type":"exact"}],"termid":"SO:0000316"}


id: GO:0006704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glucocorticoids, hormonal C21 corticosteroids synthesized from cholesterol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucocorticoid metabolic process","termid":"GO:0008211"},{"relation_name":"is_a","term_name":"steroid hormone biosynthetic process","termid":"GO:0120178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"glucocorticoid biosynthetic process","synonyms":[{"name":"glucocorticoid anabolism","type":"exact"},{"name":"glucocorticoid biosynthesis","type":"exact"},{"name":"glucocorticoid formation","type":"exact"},{"name":"glucocorticoid synthesis","type":"exact"}],"termid":"GO:0006704"}


id: GO:0097322
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a 7SK small nuclear RNA (7SK snRNA).","definition_xrefs":["PMID:21853533","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"7SK snRNA binding","synonyms":[{"name":"7SK small nuclear RNA binding","type":"exact"}],"termid":"GO:0097322"}


id: PR:Q10432
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ccq1 gene.","definition_xrefs":["UniProtKB:Q10432","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil quantitatively-enriched protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC188.07","synonyms":[{"name":"SMC protein ccq1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ccq1","type":"exact"},{"name":"structural maintenance of chromosomes protein ccq1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10432"}


id: GO:0031964
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-beta-alanyl histamine + H2O = histamine + beta-alanine.","definition_xrefs":["PMID:16299587","GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"beta-alanyl-histamine hydrolase activity","synonyms":[{"name":"carcinine hydrolase activity","type":"exact"}],"termid":"GO:0031964"}


id: PBO:0050890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immediate early response 3","termid":"PBO:0050890"}


id: GO:0046119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 7-methylguanosine, a modified nucleoside that forms a cap at the 5'-terminus of eukaryotic mRNA.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"7-methylguanosine metabolic process","termid":"GO:0008618"},{"relation_name":"is_a","term_name":"guanosine-containing compound catabolic process","termid":"GO:1901069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"7-methylguanosine catabolic process","synonyms":[{"name":"7-methylguanosine breakdown","type":"exact"},{"name":"7-methylguanosine catabolism","type":"exact"},{"name":"7-methylguanosine degradation","type":"exact"}],"termid":"GO:0046119"}


id: PBO:0039328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachidonate 15-lipoxygenase pseudogene 1","termid":"PBO:0039328"}


id: GO:1904535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of telomeric loop disassembly.","definition_xrefs":["GOC:nc","PMID:22579284","GOC:TermGenie","GO_REF:0000058","GOC:BHF_telomere","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of telomere maintenance","termid":"GO:0032206"},{"relation_name":"is_a","term_name":"regulation of telomeric loop disassembly","termid":"GO:1904533"},{"relation_name":"positively_regulates","term_name":"telomeric loop disassembly","termid":"GO:0090657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0008150","GO:0032200","GO:0006259"],"is_obsolete":false,"name":"positive regulation of telomeric loop disassembly","synonyms":[{"name":"activation of T loop disassembly","type":"narrow"},{"name":"activation of telomeric loop disassembly","type":"narrow"},{"name":"positive regulation of T loop disassembly","type":"exact"},{"name":"up regulation of T loop disassembly","type":"exact"},{"name":"up regulation of telomeric loop disassembly","type":"exact"},{"name":"up-regulation of T loop disassembly","type":"exact"},{"name":"up-regulation of telomeric loop disassembly","type":"exact"},{"name":"upregulation of T loop disassembly","type":"exact"},{"name":"upregulation of telomeric loop disassembly","type":"exact"}],"termid":"GO:1904535"}


id: PBO:0040211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASXL3 divergent transcript","termid":"PBO:0040211"}


id: MOD:01798
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an N-terminal 3'-phosphohistidine residue to 3'-phosphohistidine immonium ion.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"3'-phospho-L-histidine","termid":"MOD:00045"},{"relation_name":"is_a","term_name":"phosphohistidine immonium ion","termid":"MOD:01791"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-phosphohistidine immonium ion","synonyms":[{"name":"2-(1-phosphono-1H-imidazol-5-yl)ethaniminium","type":"exact"},{"name":"Npi-phosphorylated L-histidine","type":"exact"}],"termid":"MOD:01798"}


id: GO:0043152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which infecting bacteria are clumped together by a host organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibacterial humoral response","termid":"GO:0019731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"induction of bacterial agglutination","termid":"GO:0043152"}


id: GO:0007465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the R7 photoreceptor commits to its cell fate. The R7 receptor contributes the central part of the rhabdomere in the apical parts of the ommatidium.","definition_xrefs":["PMID:3937883","PMID:3076112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor fate commitment","termid":"GO:0001752"},{"relation_name":"part_of","term_name":"R7 cell differentiation","termid":"GO:0045466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"R7 cell fate commitment","termid":"GO:0007465"}


id: PBO:0076447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAFA chemokine like family member 3","termid":"PBO:0076447"}


id: PR:Q9UT61
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An alpha-mannosidase 2C1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01225","PANTHER:PTHR11607:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-mannosidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC513.05","secondary_identifiers":["UniProtKB:Q9UT61"],"synonyms":[{"name":"Spom972h-MAN2C1","type":"exact"},{"name":"alpha-D-mannoside mannohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT61"}


id: FYPO:0006122
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the methylation of one or more specific proteins is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein methylation during vegetative growth","synonyms":[{"name":"abnormal protein methylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006122"}


id: GO:0042072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cell adhesion receptor inhibitor activity (obsolete GO:0042072)","synonyms":[{"name":"cell adhesion receptor inhibitor activity","type":"exact"}],"termid":"GO:0042072"}


id: FYPO:0001020
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing calcium ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000257","FYPO:0000003","FYPO:0000139","FYPO:0002060","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on calcium","synonyms":[{"name":"normal cell population growth in presence of calcium ions","type":"exact"},{"name":"normal cell population growth on calcium","type":"exact"},{"name":"normal cell population growth on calcium ion","type":"exact"},{"name":"normal cellular response to calcium ion","type":"related"},{"name":"normal growth on calcium ion","type":"exact"},{"name":"normal vegetative cell population growth on calcium ion","type":"exact"}],"termid":"FYPO:0001020"}


id: PBO:0048092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 13","termid":"PBO:0048092"}


id: GO:1900973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sarcinapterin biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of sarcinapterin metabolic process","termid":"GO:1900970"},{"relation_name":"is_a","term_name":"regulation of sarcinapterin biosynthetic process","termid":"GO:1900971"},{"relation_name":"positively_regulates","term_name":"sarcinapterin biosynthetic process","termid":"GO:1900868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0042559"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0042559"}],"interesting_parent_ids":["GO:0044281","GO:0042559","GO:0008150"],"is_obsolete":false,"name":"positive regulation of sarcinapterin biosynthetic process","synonyms":[{"name":"activation of sarcinapterin anabolism","type":"exact"},{"name":"activation of sarcinapterin biosynthesis","type":"exact"},{"name":"activation of sarcinapterin biosynthetic process","type":"narrow"},{"name":"activation of sarcinapterin formation","type":"exact"},{"name":"activation of sarcinapterin synthesis","type":"exact"},{"name":"positive regulation of sarcinapterin anabolism","type":"exact"},{"name":"positive regulation of sarcinapterin biosynthesis","type":"exact"},{"name":"positive regulation of sarcinapterin formation","type":"exact"},{"name":"positive regulation of sarcinapterin synthesis","type":"exact"},{"name":"up regulation of sarcinapterin anabolism","type":"exact"},{"name":"up regulation of sarcinapterin biosynthesis","type":"exact"},{"name":"up regulation of sarcinapterin biosynthetic process","type":"exact"},{"name":"up regulation of sarcinapterin formation","type":"exact"},{"name":"up regulation of sarcinapterin synthesis","type":"exact"},{"name":"up-regulation of sarcinapterin anabolism","type":"exact"},{"name":"up-regulation of sarcinapterin biosynthesis","type":"exact"},{"name":"up-regulation of sarcinapterin biosynthetic process","type":"exact"},{"name":"up-regulation of sarcinapterin formation","type":"exact"},{"name":"up-regulation of sarcinapterin synthesis","type":"exact"},{"name":"upregulation of sarcinapterin anabolism","type":"exact"},{"name":"upregulation of sarcinapterin biosynthesis","type":"exact"},{"name":"upregulation of sarcinapterin biosynthetic process","type":"exact"},{"name":"upregulation of sarcinapterin formation","type":"exact"},{"name":"upregulation of sarcinapterin synthesis","type":"exact"}],"termid":"GO:1900973"}


id: PBO:0050289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNF1 homeobox B","termid":"PBO:0050289"}


id: GO:0038072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in a MAP kinase (MAPK) substrate, as part of a MAPK signaling cascade that contributes to conjugation with cellular fusion.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase kinase activity involved in conjugation with cellular fusion (obsolete GO:0038072)","synonyms":[{"name":"MAP2K activity involved in conjugation with cellular fusion","type":"exact"},{"name":"MAPKK activity involved in conjugation with cellular fusion","type":"exact"}],"termid":"GO:0038072"}


id: MOD:01561
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Applied Biosystems iTRAQ8plex-117 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-117 reporter+balance reagent acylated residue","termid":"MOD:01556"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-117 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01561"}


id: GO:0052667
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: N-methylethanolamine phosphate + S-adenosyl-L-methionine = N,N-dimethylethanolamine phosphate + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphomethylethanolamine N-methyltransferase activity (obsolete GO:0052667)","synonyms":[{"name":"N-methylethanolamine phosphate N-methyltransferase activity","type":"exact"}],"termid":"GO:0052667"}


id: PBO:0001771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L41 (predicted)","termid":"PBO:0001771"}


id: PBO:0077427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 164","termid":"PBO:0077427"}


id: PBO:0029772
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spore_shape","termid":"PBO:0029772"}


id: PBO:0040552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5","termid":"PBO:0040552"}


id: PR:P36622
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ste4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P36622"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sexual differentiation protein ste4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1565.04c","synonyms":[{"name":"Spom972h-ste4","type":"exact"}],"termid":"PR:P36622"}


id: GO:0035397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Positive regulation of an adaptive immune response mediated via cytokine production by helper T cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"helper T cell enhancement of adaptive immune response","synonyms":[{"name":"provision of T cell help","type":"exact"}],"termid":"GO:0035397"}


id: PBO:0090041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-plasma membrane tethering protein Ltc2","termid":"PBO:0090041"}


id: PBO:0070001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1297, pseudogene","termid":"PBO:0070001"}


id: PBO:0002093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S7 (predicted)","termid":"PBO:0002093"}


id: PBO:0043656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPI coat complex subunit zeta 2","termid":"PBO:0043656"}


id: PBO:0000485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEK kinase (MEKK) Mkh1","termid":"PBO:0000485"}


id: GO:0015368
data:
  {"annotated_genes":["SJAG_04028","SJAG_04096","SJAG_04698"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111631,94393,86763,87254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015369"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + cation(out) = Ca2+(out) + cation(in).","definition_xrefs":["TC:2.A.19.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion transmembrane transporter activity","termid":"GO:0015085"},{"relation_name":"is_a","term_name":"metal cation:monoatomic cation antiporter activity","termid":"GO:0140828"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04028":null,"SJAG_04096":null,"SJAG_04698":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"calcium:monoatomic cation antiporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-425822"],"synonyms":[{"name":"calcium:cation antiporter activity","type":"broad"}],"termid":"GO:0015368","terms_by_termid":{"GO:0015369":null}}


id: PBO:0043367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collectrin, amino acid transport regulator","termid":"PBO:0043367"}


id: GO:1900685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fumonisin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of fumonisin biosynthetic process","termid":"GO:1900683"},{"relation_name":"positively_regulates","term_name":"fumonisin biosynthetic process","termid":"GO:1900541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of fumonisin biosynthetic process","synonyms":[{"name":"activation of fumonisin anabolism","type":"exact"},{"name":"activation of fumonisin biosynthesis","type":"exact"},{"name":"activation of fumonisin biosynthetic process","type":"narrow"},{"name":"activation of fumonisin formation","type":"exact"},{"name":"activation of fumonisin synthesis","type":"exact"},{"name":"positive regulation of fumonisin anabolism","type":"exact"},{"name":"positive regulation of fumonisin biosynthesis","type":"exact"},{"name":"positive regulation of fumonisin formation","type":"exact"},{"name":"positive regulation of fumonisin synthesis","type":"exact"},{"name":"up regulation of fumonisin anabolism","type":"exact"},{"name":"up regulation of fumonisin biosynthesis","type":"exact"},{"name":"up regulation of fumonisin biosynthetic process","type":"exact"},{"name":"up regulation of fumonisin formation","type":"exact"},{"name":"up regulation of fumonisin synthesis","type":"exact"},{"name":"up-regulation of fumonisin anabolism","type":"exact"},{"name":"up-regulation of fumonisin biosynthesis","type":"exact"},{"name":"up-regulation of fumonisin biosynthetic process","type":"exact"},{"name":"up-regulation of fumonisin formation","type":"exact"},{"name":"up-regulation of fumonisin synthesis","type":"exact"},{"name":"upregulation of fumonisin anabolism","type":"exact"},{"name":"upregulation of fumonisin biosynthesis","type":"exact"},{"name":"upregulation of fumonisin biosynthetic process","type":"exact"},{"name":"upregulation of fumonisin formation","type":"exact"},{"name":"upregulation of fumonisin synthesis","type":"exact"}],"termid":"GO:1900685"}


id: MOD:00312
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-myristoyl-L-cysteine.","definition_xrefs":["RESID:AA0307","PubMed:10026218","Unimod:45#C","PubMed:10080938","PubMed:8824274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-myristoylated residue","termid":"MOD:00655"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"S-myristoyl-L-cysteine","synonyms":[{"name":"(R)-2-amino-3-(tetradecanoylsulfanyl)propanoic acid","type":"exact"},{"name":"LIPID S-myristoyl cysteine","type":"exact"},{"name":"Myristoyl","type":"related"},{"name":"Myristoylation","type":"related"},{"name":"S-(C14:1 aliphatic acyl)cysteine","type":"exact"},{"name":"S-myristoyl-L-cysteine","type":"exact"},{"name":"S-myristoylated L-cysteine","type":"exact"},{"name":"SMyrCys","type":"exact"},{"name":"tetradecanoate cysteine thioester","type":"exact"}],"termid":"MOD:00312"}


id: FYPO:0002809
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 6,7-dimethyl-8-ribityllumazine synthase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal 6,7-dimethyl-8-ribityllumazine synthase activity","termid":"FYPO:0002808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased 6,7-dimethyl-8-ribityllumazine synthase activity","synonyms":[{"name":"reduced 6,7-dimethyl-8-ribityllumazine synthase activity","type":"exact"}],"termid":"FYPO:0002809"}


id: PBO:0066183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 7","termid":"PBO:0066183"}


id: PBO:0083564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified ORF AAC1","termid":"PBO:0083564"}


id: GO:0018037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-aspartic acid 1-amide by hydrolysis and oxidation of an interior Asp-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0084"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-aspartic acid amidation (obsolete GO:0018037)","termid":"GO:0018037"}


id: GO:0001304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that results in changes in chromatin structure contributing to replicative cell aging.","definition_xrefs":["GOC:dph","GOC:jh","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete progressive alteration of chromatin involved in replicative cell aging (obsolete GO:0001304)","synonyms":[{"name":"progressive alteration of chromatin during replicative cell ageing","type":"exact"},{"name":"progressive alteration of chromatin during replicative cell aging","type":"related"}],"termid":"GO:0001304"}


id: PBO:0069353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 613, pseudogene","termid":"PBO:0069353"}


id: GO:0035145
data:
  {"annotated_genes":["SJAG_01252","SJAG_05014","SJAG_04025","SJAG_02879","SJAG_01852","SJAG_00888"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87569,88409,89639,99221,101932,105834],"is_not":false,"summary":null,"term":"GO:0035145"}]},"cv_name":"cellular_component","definition":"A multi-subunit complex deposited by the spliceosome upstream of messenger RNA exon-exon junctions. The exon-exon junction complex provides a binding platform for factors involved in mRNA export and nonsense-mediated mRNA decay.","definition_xrefs":["PMID:11532962","PMID:11743026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00888":null,"SJAG_01252":null,"SJAG_01852":null,"SJAG_02879":null,"SJAG_04025":null,"SJAG_05014":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"exon-exon junction complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"EJC","type":"exact"},{"name":"exon junction complex","type":"exact"}],"termid":"GO:0035145","terms_by_termid":{"GO:0035145":null}}


id: PBO:0111651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set1C complex and Lid2 complex subunit, Dpy-30 domain Sdc1","termid":"PBO:0111651"}


id: GO:0006417
data:
  {"annotated_genes":["SJAG_05000","SJAG_01079","SJAG_00423","SJAG_04544","SJAG_04085","SJAG_00579","SJAG_00690","SJAG_04383","SJAG_01942","SJAG_04064","SJAG_04959","SJAG_00642","SJAG_04452","SJAG_00251","SJAG_01058","SJAG_03550","SJAG_02043","SJAG_01249","SJAG_02026","SJAG_03677","SJAG_16454","SJAG_04873","SJAG_00892","SJAG_01436","SJAG_02812","SJAG_00786","SJAG_02072","SJAG_01517","SJAG_02723","SJAG_05265","SJAG_04159","SJAG_04291","SJAG_04756","SJAG_02592","SJAG_00169","SJAG_02189","SJAG_02285","SJAG_03501","SJAG_04130","SJAG_04890","SJAG_03869","SJAG_02638","SJAG_01047","SJAG_02467","SJAG_00600"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95501,91653,110917,114288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000766"},{"annotations":[105723,108215,87360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904689"},{"annotations":[88863,105724,88562,95393,111682,90425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990625"},{"annotations":[95503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001125"},{"annotations":[84637,102699,113200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000767"},{"annotations":[94764,97968,108730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070131"},{"annotations":[96517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070134"},{"annotations":[65824,67591],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045901"},{"annotations":[97065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045948"},{"annotations":[65825,67592,90861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045905"},{"annotations":[113529,105759,92139,108455,95507,96334,96776,98639,112899,92282,101293,107219,86330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000765"},{"annotations":[105537,110038,91525,106207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140018"},{"annotations":[100027,99391,91284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990611"},{"annotations":[98561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070129"},{"annotations":[99161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990983"},{"annotations":[107775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006449"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-transcriptional regulation of gene expression","termid":"GO:0010608"},{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"regulates","term_name":"translation","termid":"GO:0006412"}],"gene_count":45,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00251":null,"SJAG_00423":null,"SJAG_00579":null,"SJAG_00600":null,"SJAG_00642":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_00892":null,"SJAG_01047":null,"SJAG_01058":null,"SJAG_01079":null,"SJAG_01249":null,"SJAG_01436":null,"SJAG_01517":null,"SJAG_01942":null,"SJAG_02026":null,"SJAG_02043":null,"SJAG_02072":null,"SJAG_02189":null,"SJAG_02285":null,"SJAG_02467":null,"SJAG_02592":null,"SJAG_02638":null,"SJAG_02723":null,"SJAG_02812":null,"SJAG_03501":null,"SJAG_03550":null,"SJAG_03677":null,"SJAG_03869":null,"SJAG_04064":null,"SJAG_04085":null,"SJAG_04130":null,"SJAG_04159":null,"SJAG_04291":null,"SJAG_04383":null,"SJAG_04452":null,"SJAG_04544":null,"SJAG_04756":null,"SJAG_04873":null,"SJAG_04890":null,"SJAG_04959":null,"SJAG_05000":null,"SJAG_05265":null,"SJAG_16454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of translation","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0006445"],"synonyms":[{"name":"regulation of protein anabolism","type":"exact"},{"name":"regulation of protein biosynthesis","type":"exact"},{"name":"regulation of protein formation","type":"exact"},{"name":"regulation of protein synthesis","type":"exact"}],"termid":"GO:0006417","terms_by_termid":{"GO:0006449":null,"GO:0045901":null,"GO:0045905":null,"GO:0045948":null,"GO:0070129":null,"GO:0070131":null,"GO:0070134":null,"GO:0140018":null,"GO:1904689":null,"GO:1990611":null,"GO:1990625":null,"GO:1990983":null,"GO:2000765":null,"GO:2000766":null,"GO:2000767":null,"GO:2001125":null}}


id: GO:0042300
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2,3-epoxysqualene = beta-amyrin.","definition_xrefs":["RHEA:31007","PMID:9746369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidosqualene cyclase activity","termid":"GO:0031559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"beta-amyrin synthase activity","secondary_identifiers":["MetaCyc:RXN-7570","EC:5.4.99.39"],"synonyms":[{"name":"2,3-oxidosqualene beta-amyrin cyclase","type":"exact"},{"name":"oxidosqualene:beta-amyrin cyclase activity","type":"exact"}],"termid":"GO:0042300"}


id: PBO:0049304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase mu 5","termid":"PBO:0049304"}


id: PBO:0003814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1 adaptor complex mu subunit Apm1","termid":"PBO:0003814"}


id: PATO:0000718
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A viability quality inhering in a population by virtue of the bearer's long term survival inability.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viability","termid":"PATO:0000169"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal (sensu genetics)","termid":"PATO:0000718"}


id: GO:0071259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a magnetic stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to magnetism","termid":"GO:0071000"},{"relation_name":"is_a","term_name":"cellular response to abiotic stimulus","termid":"GO:0071214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to magnetism","synonyms":[{"name":"cellular response to magnetic stimulus","type":"exact"}],"termid":"GO:0071259"}


id: PBO:0061002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHP2 ribonucleoprotein pseudogene 2","termid":"PBO:0061002"}


id: GO:0106045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of methylglyoxal from a glycated guanine, to form lactate and a deglycated guanine.","definition_xrefs":["PMID:28596309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylglyoxal metabolic process","termid":"GO:0009438"},{"relation_name":"is_a","term_name":"guanine deglycation","termid":"GO:0106044"},{"relation_name":"is_a","term_name":"cellular detoxification of methylglyoxal","termid":"GO:0140041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086","GO:0098754"],"is_obsolete":false,"name":"guanine deglycation, methylglyoxal removal","termid":"GO:0106045"}


id: FYPO:0001739
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of pantothenate into the cell occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal pantothenate import","termid":"FYPO:0001737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"increased pantothenate import","synonyms":[{"name":"increased pantothenate import during mitotic cell cycle","type":"related"},{"name":"increased pantothenate import during vegetative growth","type":"exact"},{"name":"increased pantothenate import into cell","type":"exact"},{"name":"increased pantothenate uptake","type":"exact"},{"name":"increased pantothenic acid import","type":"related"}],"termid":"FYPO:0001739"}


id: PBO:0071840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 35","termid":"PBO:0071840"}


id: PBO:0042859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 77","termid":"PBO:0042859"}


id: PBO:0028867
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_mRNA_level_during_vegetative_growth","termid":"PBO:0028867"}


id: PBO:0036389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORMDL family protein Orm1 (predicted)","termid":"PBO:0036389"}


id: PBO:0068410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein, transmembrane 1 pseudogene 1","termid":"PBO:0068410"}


id: GO:0102967
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (6E)-8-hydroxygeraniol + NADP = (6E)-8-hydroxygeranial + NADPH + H+.","definition_xrefs":["GOC:pz","RHEA:32607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"10-hydroxygeraniol oxidoreductase activity","secondary_identifiers":["MetaCyc:RXN-9367"],"termid":"GO:0102967"}


id: GO:0042668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into an auditory hair cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate determination","termid":"GO:0048664"},{"relation_name":"part_of","term_name":"auditory receptor cell fate commitment","termid":"GO:0009912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"auditory receptor cell fate determination","synonyms":[{"name":"auditory hair cell fate determination","type":"exact"}],"termid":"GO:0042668"}


id: FYPO:0000882
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 9 of histone H3 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 trimethylation during vegetative growth","termid":"FYPO:0000787"},{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0005447","FYPO:0002274","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased histone H3-K9 trimethylation during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 trimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 trimethylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9 trimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me3 during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 trimethylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 trimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000882"}


id: GO:0010860
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Modulates the activity of the proteasome complex. The proteasome complex performs regulated ubiquitin-dependent cytosolic and nuclear proteolysis.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete proteasome regulator activity (obsolete GO:0010860)","synonyms":[{"name":"proteasome regulator activity","type":"exact"}],"termid":"GO:0010860"}


id: PBO:0083518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF MRM1/YOR201c","termid":"PBO:0083518"}


id: PBO:0066646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulating synaptic membrane exocytosis 4","termid":"PBO:0066646"}


id: PBO:0064081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoinositide interacting regulator of transient receptor potential channels","termid":"PBO:0064081"}


id: PBO:0026774
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_cellular_response_to_salt_stress","termid":"PBO:0026774"}


id: GO:1904158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an axonemal central apparatus.","definition_xrefs":["GOC:cilia","GO_REF:0000079","GOC:TermGenie","GOC:krc","PMID:9295136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"axoneme assembly","termid":"GO:0035082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0007010","GO:0044085","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"axonemal central apparatus assembly","synonyms":[{"name":"axonemal central apparatus formation","type":"exact"}],"termid":"GO:1904158"}


id: PBO:0066351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA terminal phosphate cyclase like 1","termid":"PBO:0066351"}


id: GO:0047613
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cis-aconitate + H+ = CO2 + itaconate.","definition_xrefs":["EC:4.1.1.6","RHEA:15253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"aconitate decarboxylase activity","secondary_identifiers":["MetaCyc:ACONITATE-DECARBOXYLASE-RXN","KEGG_REACTION:R02243"],"synonyms":[{"name":"CAD activity","type":"broad"},{"name":"cis-aconitate carboxy-lyase (itaconate-forming)","type":"related"},{"name":"cis-aconitate carboxy-lyase activity","type":"related"},{"name":"cis-aconitic decarboxylase activity","type":"related"}],"termid":"GO:0047613"}


id: GO:0045928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving juvenile hormone.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of juvenile hormone metabolic process","termid":"GO:0007556"},{"relation_name":"is_a","term_name":"negative regulation of hormone metabolic process","termid":"GO:0032351"},{"relation_name":"is_a","term_name":"negative regulation of isoprenoid metabolic process","termid":"GO:0045827"},{"relation_name":"negatively_regulates","term_name":"juvenile hormone metabolic process","termid":"GO:0006716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of juvenile hormone metabolic process","synonyms":[{"name":"down regulation of juvenile hormone metabolic process","type":"exact"},{"name":"down-regulation of juvenile hormone metabolic process","type":"exact"},{"name":"downregulation of juvenile hormone metabolic process","type":"exact"},{"name":"inhibition of juvenile hormone metabolic process","type":"narrow"},{"name":"negative regulation of juvenile hormone metabolism","type":"exact"}],"termid":"GO:0045928"}


id: GO:0031397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the addition of ubiquitin groups to a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein ubiquitination","termid":"GO:0031396"},{"relation_name":"is_a","term_name":"negative regulation of protein modification by small protein conjugation or removal","termid":"GO:1903321"},{"relation_name":"negatively_regulates","term_name":"protein ubiquitination","termid":"GO:0016567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"negatively_regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"negative regulation of protein ubiquitination","synonyms":[{"name":"down regulation of protein ubiquitination","type":"exact"},{"name":"down-regulation of protein ubiquitination","type":"exact"},{"name":"downregulation of protein ubiquitination","type":"exact"},{"name":"inhibition of protein ubiquitination","type":"narrow"}],"termid":"GO:0031397"}


id: PBO:0040232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 4 pseudogene 4","termid":"PBO:0040232"}


id: PR:P87061
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tea1 gene.","definition_xrefs":["UniProtKB:P87061","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tip elongation aberrant protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1223.06","synonyms":[{"name":"Spom972h-tea1","type":"exact"},{"name":"altered polarity protein 8 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"cell polarity protein tea1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87061"}


id: PBO:0034378
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_gametology_relationship_with","termid":"PBO:0034378"}


id: GO:0002042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of endothelial cells into the extracellular matrix in order to form new blood vessels involved in sprouting angiogenesis.","definition_xrefs":["PMID:16391003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel endothelial cell migration","termid":"GO:0043534"},{"relation_name":"part_of","term_name":"sprouting angiogenesis","termid":"GO:0002040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in sprouting angiogenesis","termid":"GO:0002042"}


id: PBO:0058564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6506","termid":"PBO:0058564"}


id: PBO:0038636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA thioesterase 1","termid":"PBO:0038636"}


id: PATO:0002131
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A displaced angular placement quality inhering in a body part by virtue of the bearer's movement away from the medial plane of the body.","definition_xrefs":["wikipedia:wikipedia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"displaced to","termid":"PATO:0002168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abduction","termid":"PATO:0002131"}


id: PBO:0046592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K3 member 2","termid":"PBO:0046592"}


id: GO:0070131
data:
  {"annotated_genes":["SJAG_03550","SJAG_01249","SJAG_01517","SJAG_04959"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94764,97968,108730],"is_not":false,"summary":null,"term":"GO:0070131"},{"annotations":[96517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070134"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA in a mitochondrion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translation","termid":"GO:0045727"},{"relation_name":"is_a","term_name":"regulation of mitochondrial translation","termid":"GO:0070129"},{"relation_name":"positively_regulates","term_name":"mitochondrial translation","termid":"GO:0032543"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01249":null,"SJAG_01517":null,"SJAG_03550":null,"SJAG_04959":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0008150","GO:0140053","GO:0010467"],"is_obsolete":false,"name":"positive regulation of mitochondrial translation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of mitochondrial protein anabolism","type":"exact"},{"name":"positive regulation of mitochondrial protein biosynthesis","type":"exact"},{"name":"positive regulation of mitochondrial protein formation","type":"exact"},{"name":"positive regulation of mitochondrial protein synthesis","type":"exact"}],"termid":"GO:0070131","terms_by_termid":{"GO:0070131":null,"GO:0070134":null}}


id: PBO:0085867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; has strong similarity to alanyl-tRNA synthases from Eubacteria; null mutant displays decreased translation rate and increased readthrough of premature stop codons; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YNL040W is not an essential gene","termid":"PBO:0085867"}


id: PBO:0046426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPH receptor B1","termid":"PBO:0046426"}


id: PBO:0043913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRLF3 pseudogene 3","termid":"PBO:0043913"}


id: PBO:0065996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS like proto-oncogene A","termid":"PBO:0065996"}


id: PBO:0085207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Outward-rectifier potassium channel of the plasma membrane; has two pore domains in tandem, each of which forms a functional channel permeable to potassium; carboxy tail functions to prevent inner gate closures; target of K1 toxin","termid":"PBO:0085207"}


id: GO:0140444
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together a cytoskeletal protein or protein complex and a nuclear membrane lipid or membrane-associated protein, in order to maintain the localization of the cytoskeleton at a specific location of the nuclear membrane.","definition_xrefs":["PMID:16237665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-membrane adaptor activity","termid":"GO:0043495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0030674","GO:0060090"],"is_obsolete":false,"name":"cytoskeleton-nuclear membrane anchor activity","synonyms":[{"name":"cytoskeletal protein-nuclear membrane adaptor activity","type":"exact"},{"name":"cytoskeletal protein-nuclear membrane anchor activity","type":"exact"},{"name":"cytoskeleton nuclear membrane anchor activity","type":"exact"},{"name":"nuclear membrane-cytoskeleton anchor activity","type":"exact"}],"termid":"GO:0140444"}


id: PBO:0108688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP I, II and III complex RabGEF subunit Bet3","termid":"PBO:0108688"}


id: GO:0005240
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete glycine receptor-associated protein (obsolete GO:0005240)","synonyms":[{"name":"glycine receptor-associated protein","type":"exact"}],"termid":"GO:0005240"}


id: PBO:0034773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hrd1 ubiquitin ligase complex Der1 (predicted)","termid":"PBO:0034773"}


id: PBO:0068995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 239, pseudogene","termid":"PBO:0068995"}


id: PBO:0073235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO peptidase family member, NEDD8 specific","termid":"PBO:0073235"}


id: GO:0061544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of a peptide from a cell in which the peptide acts as a neurotransmitter.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide secretion","termid":"GO:0002790"},{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0023052"],"is_obsolete":false,"name":"peptide secretion, neurotransmission","termid":"GO:0061544"}


id: PBO:0071986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 15","termid":"PBO:0071986"}


id: PBO:0062359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily S member 1","termid":"PBO:0062359"}


id: FYPO:0007419
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which telomere tethering at the nuclear periphery is decreased during G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere localization","termid":"FYPO:0007418"},{"relation_name":"is_a","term_name":"abnormal heterochromatin tethering at nuclear periphery","termid":"FYPO:0007768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased telomere tethering at nuclear periphery during G0","synonyms":[{"name":"decreased telomere anchoring at nuclear periphery during G0","type":"exact"},{"name":"decreased telomere tethering to NE in G0","type":"related"},{"name":"decreased telomere tethering to NE in quiescence","type":"related"},{"name":"increased telomere detachment from nuclear envelope in quiescence","type":"related"}],"termid":"FYPO:0007419"}


id: GO:0002672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of B cell anergy.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of B cell tolerance induction","termid":"GO:0002663"},{"relation_name":"is_a","term_name":"regulation of B cell anergy","termid":"GO:0002670"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte anergy","termid":"GO:0002913"},{"relation_name":"positively_regulates","term_name":"B cell anergy","termid":"GO:0002515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of B cell anergy","synonyms":[{"name":"activation of B cell anergy","type":"narrow"},{"name":"positive regulation of B lymphocyte anergy","type":"exact"},{"name":"positive regulation of B-cell anergy","type":"exact"},{"name":"positive regulation of B-lymphocyte anergy","type":"exact"},{"name":"stimulation of B cell anergy","type":"narrow"},{"name":"up regulation of B cell anergy","type":"exact"},{"name":"up-regulation of B cell anergy","type":"exact"},{"name":"upregulation of B cell anergy","type":"exact"}],"termid":"GO:0002672"}


id: PBO:0030010
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-substance_absent_from_cell","termid":"PBO:0030010"}


id: GO:0046682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cyclodiene stimulus. A cyclodiene is any organic insecticide (as dieldrin or chlordane) with a chlorinated methylene group forming a bridge across a 6-membered carbon ring.","definition_xrefs":["ISBN:0877797099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to insecticide","termid":"GO:0017085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cyclodiene","synonyms":[{"name":"cyclodiene resistance","type":"related"},{"name":"cyclodiene susceptibility/resistance","type":"related"}],"termid":"GO:0046682"}


id: GO:0140867
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of ADP-ribose groups to the glutamate-18 residue of histone H2B (or an equivalent residue).","definition_xrefs":["PMID:28252050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD+-protein-glutamate ADP-ribosyltransferase activity","termid":"GO:0140807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"NAD+-histone H2BE18 glutamate ADP-ribosyltransferase activity","synonyms":[{"name":"NAD+-histone H2B-E18 glutamate ADP-ribosyltransferase activity","type":"exact"},{"name":"NAD+-histone-glutamate ADP-ribosyltransferase activity (H2B-E18 specific)","type":"exact"}],"termid":"GO:0140867"}


id: PBO:0059939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 25","termid":"PBO:0059939"}


id: PBO:0013101
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Leucine-rich Repeat Protein","termid":"PBO:0013101"}


id: PBO:0088083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain-containing protein that interacts with Cdc48p; ubiquitin regulatory X is also known as UBX","termid":"PBO:0088083"}


id: PBO:0053791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1044","termid":"PBO:0053791"}


id: PBO:0040540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-galactosyltransferase 6","termid":"PBO:0040540"}


id: FYPO:0002862
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004105"}],"single_locus_phenotype":[{"annotations":[115205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004105"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell growth is abnormal. Cell growth is the irreversible increase in size over time by accretion and biosynthetic production of matter similar to that already present.","definition_xrefs":["GO:0016049","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00514":null,"SJAG_04522":null},"genotype_count":2,"genotypes_by_uniquename":{"rga4delta__rga6delta":{"display_name":"rga4delta rga6delta","display_uniquename":"rga4delta__rga6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_00028","SJAG_04522"],"name":"abnormal cell growth","references_by_uniquename":{"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_00514"],"single_locus_genotype_uniquenames":["scd1delta"],"termid":"FYPO:0002862","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0004105":null,"FYPO_EXT:0000001":null}}


id: PBO:0050260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 38","termid":"PBO:0050260"}


id: PBO:0045958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermal growth factor receptor","termid":"PBO:0045958"}


id: PR:O60122
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trp4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anthranilate phosphoribosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.08","synonyms":[{"name":"Spom972h-trp4","type":"exact"}],"termid":"PR:O60122"}


id: PBO:0055038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2453","termid":"PBO:0055038"}


id: PBO:0044176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catenin alpha like 1","termid":"PBO:0044176"}


id: PBO:0002090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGEF Scd1","termid":"PBO:0002090"}


id: GO:0018518
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,6-dihydroxy-3-methyl-5,6-dihydroquinolin-2(1H)-one + NAD+ = 5,6-dihydroxy-3-methyl-2-oxo-1,2-dihydroquinoline + H+ + NADH.","definition_xrefs":["RHEA:24556","EC:1.3.1.65"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"5,6-dihydroxy-3-methyl-2-oxo-1,2,5,6-tetrahydroquinoline dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r0053","MetaCyc:RXN-643","KEGG_REACTION:R05312"],"synonyms":[{"name":"5,6-dihydrodiol-3-methyl-2-oxo-1,2-dihydroquinoline dehydrogenase","type":"related"},{"name":"5,6-dihydroxy-3-methyl-2-oxo-1,2,5,6-tetrahydroquinoline:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0018518"}


id: PBO:0081198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger imprinted 3","termid":"PBO:0081198"}


id: PBO:0032699
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H4_deacetylation_during_cellular_response_to_hydroxyurea","termid":"PBO:0032699"}


id: PBO:0017508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein associated with stress granule","termid":"PBO:0017508"}


id: GO:0019511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydroxylation of peptidyl-proline to form peptidyl-hydroxyproline.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein hydroxylation","termid":"GO:0018126"},{"relation_name":"is_a","term_name":"peptidyl-proline modification","termid":"GO:0018208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-proline hydroxylation","secondary_identifiers":["GO:0006472"],"termid":"GO:0019511"}


id: PBO:0085661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in negative regulation of iron regulon transcription; forms an iron independent complex with Fra2p, Grx3p, and Grx4p; cytosolic; mutant fails to repress transcription of iron regulon and is defective in spore formation","termid":"PBO:0085661"}


id: PR:Q9P7M4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAP27G11.14c gene.","definition_xrefs":["UniProtKB:Q9P7M4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein SPAP27G11.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP27G11.14c","synonyms":[{"name":"Spom972h-SPAP27G11.14c","type":"exact"}],"termid":"PR:Q9P7M4"}


id: GO:0047385
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + O-phospho-L-seryl-[3-methyl-2-oxobutanoate dehydrogenase] = L-seryl-[3-methyl-2-oxobutanoate dehydrogenase] + phosphate.","definition_xrefs":["EC:3.1.3.52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein phosphatase activity","termid":"GO:0004721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0004721"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0004721","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"[3-methyl-2-oxobutanoate dehydrogenase (lipoamide)]-phosphatase activity","secondary_identifiers":["MetaCyc:3.1.3.52-RXN","RHEA:77247"],"synonyms":[{"name":"branched-chain 2-keto acid dehydrogenase phosphatase activity","type":"exact"},{"name":"branched-chain alpha-keto acid dehydrogenase phosphatase","type":"exact"},{"name":"branched-chain oxo-acid dehydrogenase phosphatase activity","type":"exact"}],"termid":"GO:0047385"}


id: PR:P52822
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl501 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P52822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L5-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H5.12c","synonyms":[{"name":"Spom972h-rpl501","type":"exact"}],"termid":"PR:P52822"}


id: PBO:0067332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 424, pseudogene","termid":"PBO:0067332"}


id: FYPO:0003638
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of ADP binding by a gene product (usually a protein) in a mutant is increased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ADP binding","termid":"FYPO:0003637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"increased ADP binding","termid":"FYPO:0003638"}


id: GO:0043286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of poly(3-hydroxyalkanoates), polyesters of 3-hydroxyacids produced as intracellular granules by a large variety of bacteria.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"regulates","term_name":"poly(3-hydroxyalkanoate) biosynthetic process","termid":"GO:0042621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of poly(3-hydroxyalkanoate) biosynthetic process","synonyms":[{"name":"regulation of PHA","type":"exact"},{"name":"regulation of poly(3-hydroxyalkanoate) anabolism","type":"exact"},{"name":"regulation of poly(3-hydroxyalkanoate) biosynthesis","type":"exact"},{"name":"regulation of poly(3-hydroxyalkanoate) formation","type":"exact"},{"name":"regulation of poly(3-hydroxyalkanoate) synthesis","type":"exact"}],"termid":"GO:0043286"}


id: PBO:0034492
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_biological_process","termid":"PBO:0034492"}


id: PBO:0084361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Linker nucleoporin component of the nuclear pore complex (NPC); also part of the NPC cytoplasmic filaments; contributes to nucleocytoplasmic transport and NPC biogenesis; forms stable associations with three FG-nucleoporins (Nsp1p, Nup159p, and Nup116p); relocalizes to the cytosol in response to hypoxia","termid":"PBO:0084361"}


id: PBO:0043899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich protein 3","termid":"PBO:0043899"}


id: PBO:0109000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CATSPER2 pseudogene 1","termid":"PBO:0109000"}


id: GO:0097301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that regulates the internal concentration of potassium ions at the level of a cell by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf","PMID:20412803"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of potassium ion concentration by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0097301)","synonyms":[{"name":"cellular potassium ion homeostasis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"potassium ion homeostasis by positive regulation of transcription from RNA polymerase II promoter","type":"broad"}],"termid":"GO:0097301"}


id: PBO:0029919
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_ergosterol_level","termid":"PBO:0029919"}


id: GO:1901330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of odontoblast differentiation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibition of neuroepithelial cell differentiation","termid":"GO:0002085"},{"relation_name":"is_a","term_name":"regulation of odontoblast differentiation","termid":"GO:1901329"},{"relation_name":"negatively_regulates","term_name":"odontoblast differentiation","termid":"GO:0071895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of odontoblast differentiation","synonyms":[{"name":"down regulation of odontoblast differentiation","type":"exact"},{"name":"down-regulation of odontoblast differentiation","type":"exact"},{"name":"downregulation of odontoblast differentiation","type":"exact"},{"name":"inhibition of odontoblast differentiation","type":"narrow"}],"termid":"GO:1901330"}


id: PBO:0062436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 100 pseudogene","termid":"PBO:0062436"}


id: PBO:0028934
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_OMP_level","termid":"PBO:0028934"}


id: PBO:0047090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 138 member B","termid":"PBO:0047090"}


id: PBO:0002942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidophosphoribosyltransferase Ade4","termid":"PBO:0002942"}


id: GO:0052192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of an organism or motile cell on, within or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete movement in environment of other organism involved in symbiotic interaction (obsolete GO:0052192)","synonyms":[{"name":"locomotion in environment of other organism during symbiotic interaction","type":"related"},{"name":"movement in environment of other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052192"}


id: PBO:0052435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin light chain 2","termid":"PBO:0052435"}


id: PBO:0074833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 28B","termid":"PBO:0074833"}


id: PBO:0080350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 2 pseudogene","termid":"PBO:0080350"}


id: PBO:0063339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferating cell nuclear antigen pseudogene 4","termid":"PBO:0063339"}


id: PATO:0000436
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000436 concrete (obsolete PATO:0000436)","termid":"PATO:0000436"}


id: GO:0070090
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The intracellular plane, located halfway between the poles of the spindle, where chromosomes align during metaphase of mitotic or meiotic nuclear division.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"metaphase plate","termid":"GO:0070090"}


id: GO:0052340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of cellulose in the cell wall of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by organism of cell wall cellulose in other organism involved in symbiotic interaction (obsolete GO:0052340)","synonyms":[{"name":"catabolism by organism of cell wall cellulose in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052340"}


id: PBO:0040825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bridging integrator 3","termid":"PBO:0040825"}


id: PR:Q9UU76
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- puf6 gene.","definition_xrefs":["UniProtKB:Q9UU76","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio homology domain family member 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP1E11.11","synonyms":[{"name":"Spom972h-puf6","type":"exact"}],"termid":"PR:Q9UU76"}


id: PBO:0090288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin beta family nuclear import/export signal receptor Nmd5","termid":"PBO:0090288"}


id: PBO:0054494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1894","termid":"PBO:0054494"}


id: GO:0071711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the basement membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix organization","termid":"GO:0030198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basement membrane organization","synonyms":[{"name":"basement membrane organisation","type":"exact"}],"termid":"GO:0071711"}


id: GO:0035574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by the removal of a methyl group from lysine at position 20 of the histone.","definition_xrefs":["GOC:sp","PMID:20622853"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4-K20 demethylation (obsolete GO:0035574)","termid":"GO:0035574"}


id: PR:O74507
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC594.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C594.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC594.04c","synonyms":[{"name":"Spom972h-SPCC594.04c","type":"exact"}],"termid":"PR:O74507"}


id: PBO:0017771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nramp family manganese ion transmembrane transporter","termid":"PBO:0017771"}


id: PATO:0001157
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001157 absolute concentration value (obsolete PATO:0001157)","termid":"PATO:0001157"}


id: PBO:0070565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 31","termid":"PBO:0070565"}


id: PBO:0070734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10a pseudogene 4","termid":"PBO:0070734"}


id: FYPO:0007508
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 at subtelomeric regions occurs to a greater extent than normal.","definition_xrefs":["PMID:17434129","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 trimethylation during vegetative growth","termid":"FYPO:0000879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0002494","FYPO:0002274","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H3-K9 trimethylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"increased histone H3 K9 trimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 trimethylation at subtelomere during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 trimethylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 trimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"increased histone H3K9me3 at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 trimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0007508"}


id: GO:1901540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ent-pimara-8(14),15-diene.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene catabolic process","termid":"GO:0046247"},{"relation_name":"is_a","term_name":"ent-pimara-8(14),15-diene metabolic process","termid":"GO:1901539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"ent-pimara-8(14),15-diene catabolic process","synonyms":[{"name":"ent-pimara-8(14),15-diene breakdown","type":"exact"},{"name":"ent-pimara-8(14),15-diene catabolism","type":"exact"},{"name":"ent-pimara-8(14),15-diene degradation","type":"exact"}],"termid":"GO:1901540"}


id: GO:0000727
data:
  {"annotated_genes":["SJAG_01762","SJAG_01624","SJAG_01354","SJAG_04995","SJAG_00884","SJAG_03160","SJAG_04210","SJAG_05180","SJAG_00857","SJAG_00696","SJAG_00327","SJAG_02348","SJAG_01044"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86499,88007,95340,95481,102468,103299,106274,107962,108091,109545,111172,111344,113172],"is_not":false,"summary":null,"term":"GO:0000727"}]},"cv_name":"biological_process","definition":"The error-free repair of a double-strand break in DNA in which the centromere-proximal end of a broken chromosome searches for a homologous region in an intact chromosome. DNA synthesis initiates from the 3' end of the invading DNA strand, using the intact chromosome as the template, and progresses to the end of the chromosome.","definition_xrefs":["PMID:10357855","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-strand break repair via homologous recombination","termid":"GO:0000724"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00327":null,"SJAG_00696":null,"SJAG_00857":null,"SJAG_00884":null,"SJAG_01044":null,"SJAG_01354":null,"SJAG_01624":null,"SJAG_01762":null,"SJAG_02348":null,"SJAG_03160":null,"SJAG_04210":null,"SJAG_04995":null,"SJAG_05180":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006310","GO:0006281"],"is_obsolete":false,"name":"double-strand break repair via break-induced replication","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000727","terms_by_termid":{"GO:0000727":null}}


id: SO:0000417
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A structurally or functionally defined protein region. In proteins with multiple domains, the combination of the domains determines the function of the protein. A region which has been shown to recur throughout evolution.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_structural_region","termid":"SO:0001070"},{"relation_name":"is_a","term_name":"polypeptide_conserved_region","termid":"SO:0100021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_domain","secondary_identifiers":["SO:0001069","BS:00012","BS:00134"],"synonyms":[{"name":"domain","type":"broad"},{"name":"polypeptide domain","type":"exact"},{"name":"polypeptide_structural_domain","type":"exact"},{"name":"structural domain","type":"broad"}],"termid":"SO:0000417"}


id: PBO:0086313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with roles in exocytosis and cation homeostasis; functions in docking and fusion of post-Golgi vesicles with plasma membrane; regulates cell proliferation and colony development via the Rho1-Tor1 pathway; interacts with SNARE protein Sec9p; homolog of Drosophila lethal giant larvae tumor suppressor; SRO77 has a paralog, SRO7, that arose from the whole genome duplication","termid":"PBO:0086313"}


id: GO:0035190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of nuclei within the syncytial embryo of insects. These precise temporal and spatial patterns of nuclear movement are coordinated with mitotic divisions and are required during blastoderm formation to reposition dividing nuclei from the interior of the syncytial embryo to the cortex.","definition_xrefs":["ISBN:0879694238","GOC:bf","PMID:8314839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear migration","termid":"GO:0007097"},{"relation_name":"part_of","term_name":"embryonic development via the syncytial blastoderm","termid":"GO:0001700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"syncytial nuclear migration","termid":"GO:0035190"}


id: PBO:0068009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 311","termid":"PBO:0068009"}


id: GO:0060245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which information about the density of cells in a population is received and converted into a molecular signal.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of biotic stimulus","termid":"GO:0009595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of cell density","termid":"GO:0060245"}


id: GO:0072234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a metanephric nephron tubule over time, from its initial formation to the mature structure. A metanephric nephron tubule is an epithelial tube that is part of the metanephric nephron, the functional part of the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"},{"relation_name":"is_a","term_name":"metanephric tubule development","termid":"GO:0072170"},{"relation_name":"is_a","term_name":"metanephric nephron epithelium development","termid":"GO:0072243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric nephron tubule development","termid":"GO:0072234"}


id: GO:0047888
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H2O2 + H+ + palmitate = CO2 + 3 H2O + pentadecanal.","definition_xrefs":["EC:1.11.1.3","RHEA:23960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase activity","termid":"GO:0004601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"fatty acid peroxidase activity","secondary_identifiers":["KEGG_REACTION:R01703","MetaCyc:FATTY-ACID-PEROXIDASE-RXN"],"synonyms":[{"name":"fatty-acid peroxidase activity","type":"exact"},{"name":"hexadecanoate:hydrogen-peroxide oxidoreductase activity","type":"related"},{"name":"long chain fatty acid peroxidase activity","type":"related"}],"termid":"GO:0047888"}


id: GO:1905743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any mitochondrial calcium uptake that is involved in negative regulation of presynaptic cytosolic calcium concentration.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","PMID:26644474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium import into the mitochondrion","termid":"GO:0036444"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"part_of","term_name":"negative regulation of presynaptic cytosolic calcium concentration","termid":"GO:0099113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"calcium import into the mitochondrion involved in negative regulation of presynaptic cytosolic calcium concentration","synonyms":[{"name":"calcium ion transmembrane import into mitochondrion involved in negative regulation of presynaptic cytosolic calcium concentration","type":"exact"},{"name":"mitochondrial calcium uptake involved in negative regulation of presynaptic cytosolic calcium concentration","type":"exact"}],"termid":"GO:1905743"}


id: PATO:0001054
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A convex angle that is inside two adjacent sides of a polygon.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convex angle to","termid":"PATO:0001053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal angle","termid":"PATO:0001054"}


id: GO:1904600
data:
  {"annotated_genes":["SJAG_01993","SJAG_02864","SJAG_02700","SJAG_02989","SJAG_01943","SJAG_01894"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84327,88558,94354,94956,95037,110386],"is_not":false,"summary":null,"term":"GO:1904600"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an actin fusion focus.","definition_xrefs":["GOC:TermGenie","PMID:25825517","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"is_a","term_name":"actin cytoskeleton organization","termid":"GO:0030036"},{"relation_name":"part_of","term_name":"mating projection formation","termid":"GO:0031382"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02700":null,"SJAG_02864":null,"SJAG_02989":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0000747","GO:0007010","GO:0044085","GO:0030036"],"is_obsolete":false,"name":"mating projection actin fusion focus assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actin fusion focus assembly","type":"broad"},{"name":"actin fusion focus formation","type":"exact"}],"termid":"GO:1904600","terms_by_termid":{"GO:1904600":null}}


id: PBO:0084446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannitol dehydrogenase; deletion suppresses mutation of mpt5; DSF1 has a paralog, MAN2, that arose from a segmental duplication","termid":"PBO:0084446"}


id: PBO:0016884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein","termid":"PBO:0016884"}


id: PBO:0049928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparan-alpha-glucosaminide N-acetyltransferase","termid":"PBO:0049928"}


id: PBO:0001845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S10 (predicted)","termid":"PBO:0001845"}


id: PBO:0045262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DND microRNA-mediated repression inhibitor 1 pseudogene 2","termid":"PBO:0045262"}


id: PBO:0046265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMC3 antisense RNA 1","termid":"PBO:0046265"}


id: MOD:01552
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems iTRAQ8plex-116 reporter+balance group.","definition_xrefs":["Unimod:730#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"iTRAQ8plex-116 reporter+balance reagent acylated residue","termid":"MOD:01549"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-116 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01552"}


id: GO:0044449
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a contractile fiber, a fiber composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete contractile fiber part (obsolete GO:0044449)","synonyms":[{"name":"contractile fibre component","type":"exact"},{"name":"muscle fiber component","type":"broad"},{"name":"muscle fibre component","type":"broad"}],"termid":"GO:0044449"}


id: FYPO:0009049
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of methionine than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"resistance to methionine","synonyms":[{"name":"resistance to methionine during mitotic cell cycle","type":"related"},{"name":"resistance to methionine during vegetative growth","type":"exact"},{"name":"resistant to methionine","type":"exact"}],"termid":"FYPO:0009049"}


id: GO:0072410
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072441"}]},"cv_name":"biological_process","definition":"A process that acts directly to delay or stop progression through the cell cycle in response to signals generated as a result of meiotic cell cycle checkpoint signaling; contributes to a meiotic cell cycle checkpoint.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cell cycle checkpoint signaling","termid":"GO:0072396"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to meiotic cell cycle checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"meiotic cell cycle checkpoint effector process","type":"exact"},{"name":"response to signal involved in meiotic cell cycle checkpoint","type":"exact"}],"termid":"GO:0072410","terms_by_termid":{"GO:0072441":null}}


id: GO:0018008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The myristoylation of the N-terminal glycine of proteins to form the derivative N-myristoyl-glycine.","definition_xrefs":["RESID:AA0059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein myristoylation","termid":"GO:0006499"},{"relation_name":"is_a","term_name":"peptidyl-glycine modification","termid":"GO:0018201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042158"}],"interesting_parent_ids":["GO:0008150","GO:0042158"],"is_obsolete":false,"name":"N-terminal peptidyl-glycine N-myristoylation","synonyms":[{"name":"N-terminal peptidyl-glycine N-myristylation","type":"exact"}],"termid":"GO:0018008"}


id: PBO:0069585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 859, pseudogene","termid":"PBO:0069585"}


id: FYPO:0008262
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mannosylinositol phosphorylceramide  measured in a cell is too low to detect.","definition_xrefs":["PMID:20388730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased cellular mannosylinositol phosphorylceramide level","termid":"FYPO:0008261"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"mannosylinositol phosphorylceramide absent from cell","termid":"FYPO:0008262"}


id: PBO:0054673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2079","termid":"PBO:0054673"}


id: PBO:0066554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 17 pseudogene 1","termid":"PBO:0066554"}


id: FYPO:0004418
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell undergoes septation despite abnormal chromosome segregation, and in which the export of polyadenylated mRNA from the nucleus is decreased. The daughter cells produced by septation are both inviable. Export of all polyadenylated mRNAs or a specific mRNA may be affected.","definition_xrefs":["PomBase:vw","PMID:14511667","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"cut","termid":"FYPO:0000229"},{"relation_name":"has_part","term_name":"decreased poly(A)+ mRNA export from nucleus","termid":"FYPO:0002522"},{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0006551"},{"rel_name":"has_part","termid":"FYPO:0000138"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000032","FYPO:0006551","FYPO:0000641","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0000337","FYPO:0001320","FYPO:0000631","FYPO:0000004"],"is_obsolete":false,"name":"cut cell with decreased poly(A)+ mRNA export from nucleus","synonyms":[{"name":"cut cell with decreased poly(A)+ mRNA export from nucleus during mitotic cell cycle","type":"related"},{"name":"cut cell with decreased poly(A)+ mRNA export from nucleus during vegetative growth","type":"exact"},{"name":"cut cell with reduced poly(A)+ mRNA export from nucleus","type":"exact"},{"name":"cut with decreased poly(A)+ mRNA export from nucleus","type":"exact"},{"name":"decreased poly(A) mRNA export in cut","type":"exact"},{"name":"septation following abnormal mitotic chromosome segregation with decreased poly(A)+ mRNA export from nucleus","type":"exact"}],"termid":"FYPO:0004418"}


id: PBO:0070755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 11","termid":"PBO:0070755"}


id: PBO:0083903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Flavin adenine dinucleotide transporter; required for uptake of FAD into endoplasmic reticulum; involved in cell wall maintenance; FLC1 has a paralog, FLC3, that arose from the whole genome duplication","termid":"PBO:0083903"}


id: GO:0141195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of facultative heterochromatin into a heterochromatin domain, enriched in histone H3 methylated on lysine 9 (H3K9me), by a process mediated by a Piwi-associated RNA (piRNA).","definition_xrefs":["PMID:26494711"],"gene_count":0,"genotype_count":0,"name":"obsolete piRNA-mediated facultative heterochromatin formation (obsolete GO:0141195)","termid":"GO:0141195"}


id: GO:0006630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete lipid binding (obsolete GO:0006630)","synonyms":[{"name":"lipid binding","type":"exact"}],"termid":"GO:0006630"}


id: GO:0090519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism or cell protects itself from anoxia, which may also result in resistance to repeated exposure to anoxia.","definition_xrefs":["GOC:tb","PMID:19372430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to anoxia","termid":"GO:0034059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anoxia protection","termid":"GO:0090519"}


id: GO:0035990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a tendon cell. Tendon cell are elongated fibrocytes in which the cytoplasm is stretched between the collagen fibres of the tendon. Tendon cells have a central cell nucleus with a prominent nucleolus, a well-developed rough endoplasmic reticulum, and are responsible for synthesis and turnover of tendon fibres and ground substance.","definition_xrefs":["GOC:yaf","PMID:21412429","CL:0000388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"tendon formation","termid":"GO:0035992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tendon cell differentiation","synonyms":[{"name":"muscle attachment cell differentiation","type":"exact"},{"name":"tenocyte differentiation","type":"related"}],"termid":"GO:0035990"}


id: PBO:0063927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIK3R5 divergent transcript","termid":"PBO:0063927"}


id: PBO:0038950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adipocyte associated pyruvate carboxylase interacting lncRNA","termid":"PBO:0038950"}


id: PR:Q10231
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lanosterol synthase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lanosterol synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.01c","secondary_identifiers":["UniProtKB:Q10231"],"synonyms":[{"name":"2,3-epoxysqualene--lanosterol cyclase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"OSC (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-LSS","type":"exact"},{"name":"oxidosqualene--lanosterol cyclase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10231"}


id: GO:0003142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the cardiogenic plate are generated and organized. The cardiogenic plate is the first recognizable structure derived from the heart field.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiogenic plate morphogenesis","synonyms":[{"name":"cardiac crescent morphogenesis","type":"exact"}],"termid":"GO:0003142"}


id: PBO:0069695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 974, pseudogene","termid":"PBO:0069695"}


id: PBO:0086981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of the vacuolar transporter chaperone (VTC) complex; involved in membrane trafficking, vacuolar polyphosphate accumulation, microautophagy and non-autophagic vacuolar fusion; VTC3 has a paralog, VTC2, that arose from the whole genome duplication","termid":"PBO:0086981"}


id: GO:0035678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in form (cell shape and size) that occurs when a neuromast hair cell progresses from its initial formation to its mature state. A neuromast hair cell is a hair cell that acts as a sensory receptor of the neuromast; it is morphologically polarized as a result of the relative position of the single kinocilium and the clusters of stereocilia on its apical surface.","definition_xrefs":["CL:0000856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis involved in neuron differentiation","termid":"GO:0048667"},{"relation_name":"part_of","term_name":"neuromast hair cell development","termid":"GO:0035675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromast hair cell morphogenesis","termid":"GO:0035678"}


id: GO:0002067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a glandular epithelial cell. A glandular epithelial cell is a columnar/cuboidal epithelial cell found in a two dimensional sheet with a free surface exposed to the lumen of a gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"columnar/cuboidal epithelial cell differentiation","termid":"GO:0002065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glandular epithelial cell differentiation","termid":"GO:0002067"}


id: PBO:0031891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIP domain protein Grp1 (predicted)","termid":"PBO:0031891"}


id: GO:0019856
data:
  {"annotated_genes":["SJAG_00694","SJAG_03164","SJAG_00392","SJAG_00779","SJAG_00444","SJAG_00197","SJAG_05024","SJAG_04354","SJAG_00964"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85519],"is_not":false,"summary":null,"term":"GO:0019856"},{"annotations":[83860,107974,112795,107133,111643,89468,94559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006207"},{"annotations":[88018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006223"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrimidine nucleobases, 1,3-diazine, organic nitrogenous bases.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase metabolic process","termid":"GO:0006206"},{"relation_name":"is_a","term_name":"nucleobase biosynthetic process","termid":"GO:0046112"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound biosynthetic process","termid":"GO:0072528"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00392":null,"SJAG_00444":null,"SJAG_00694":null,"SJAG_00779":null,"SJAG_00964":null,"SJAG_03164":null,"SJAG_04354":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"pyrimidine nucleobase biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine base anabolism","type":"exact"},{"name":"pyrimidine base biosynthesis","type":"exact"},{"name":"pyrimidine base biosynthetic process","type":"exact"},{"name":"pyrimidine base formation","type":"exact"},{"name":"pyrimidine base synthesis","type":"exact"}],"termid":"GO:0019856","terms_by_termid":{"GO:0006207":null,"GO:0006223":null,"GO:0019856":null}}


id: PBO:0091960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylesterase, type B family protein","termid":"PBO:0091960"}


id: GO:0071520
data:
  {"annotated_genes":["SJAG_04621","SJAG_02864","SJAG_00938","SJAG_04498"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85394,94092,94352,104189],"is_not":false,"summary":null,"term":"GO:0071520"}]},"cv_name":"biological_process","definition":"A process of actin filament bundle distribution that occurs in the context of assembling an actomyosin contractile ring during cytokinesis, and that results in the compaction of actin filaments into a tight ring.","definition_xrefs":["GOC:mah","PMID:19713940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle convergence","termid":"GO:0090426"},{"relation_name":"is_a","term_name":"actomyosin contractile ring assembly actin filament organization","termid":"GO:2000689"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_02864":null,"SJAG_04498":null,"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0030036","GO:0008150","GO:0044085","GO:0007010","GO:0007049"],"is_obsolete":false,"name":"actomyosin contractile ring assembly actin filament bundle convergence","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actin filament bundle convergence involved in actomyosin contractile ring formation","type":"related"},{"name":"actin filament bundle convergence involved in cytokinetic actomyosin contractile ring assembly","type":"exact"}],"termid":"GO:0071520","terms_by_termid":{"GO:0071520":null}}


id: PBO:0052034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junctional sarcoplasmic reticulum protein 1","termid":"PBO:0052034"}


id: GO:1905552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to endoplasmic reticulum.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:22768340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"is_a","term_name":"regulation of protein localization to endoplasmic reticulum","termid":"GO:1905550"},{"relation_name":"positively_regulates","term_name":"protein localization to endoplasmic reticulum","termid":"GO:0070972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to endoplasmic reticulum","synonyms":[{"name":"activation of protein localisation in endoplasmic reticulum","type":"narrow"},{"name":"activation of protein localization in ER","type":"narrow"},{"name":"activation of protein localization in endoplasmic reticulum","type":"narrow"},{"name":"activation of protein localization to endoplasmic reticulum","type":"narrow"},{"name":"positive regulation of protein localisation in endoplasmic reticulum","type":"exact"},{"name":"positive regulation of protein localization in ER","type":"exact"},{"name":"positive regulation of protein localization in endoplasmic reticulum","type":"exact"},{"name":"up regulation of protein localisation in endoplasmic reticulum","type":"exact"},{"name":"up regulation of protein localization in ER","type":"exact"},{"name":"up regulation of protein localization in endoplasmic reticulum","type":"exact"},{"name":"up regulation of protein localization to endoplasmic reticulum","type":"exact"},{"name":"up-regulation of protein localisation in endoplasmic reticulum","type":"exact"},{"name":"up-regulation of protein localization in ER","type":"exact"},{"name":"up-regulation of protein localization in endoplasmic reticulum","type":"exact"},{"name":"up-regulation of protein localization to endoplasmic reticulum","type":"exact"},{"name":"upregulation of protein localisation in endoplasmic reticulum","type":"exact"},{"name":"upregulation of protein localization in ER","type":"exact"},{"name":"upregulation of protein localization in endoplasmic reticulum","type":"exact"},{"name":"upregulation of protein localization to endoplasmic reticulum","type":"exact"}],"termid":"GO:1905552"}


id: GO:0035918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism stops, prevents or reduces the frequency, rate or extent of the activity of a voltage-gated calcium channel in another organism. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["ISBN:0815340729","GOC:bf","GOC:fj","PMID:20920515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of calcium channel activity in another organism","termid":"GO:0035917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of voltage-gated calcium channel activity in another organism","synonyms":[{"name":"down-regulation of voltage-gated calcium channel activity in other organism","type":"exact"},{"name":"downregulation of voltage-gated calcium channel activity in other organism","type":"exact"},{"name":"inhibition of voltage-gated calcium channel activity in other organism","type":"narrow"},{"name":"negative regulation of voltage gated calcium channel activity in other organism","type":"exact"},{"name":"negative regulation of voltage-dependent calcium channel activity in other organism","type":"exact"},{"name":"negative regulation of voltage-gated calcium channel activity in other organism","type":"exact"},{"name":"negative regulation of voltage-sensitive calcium channel activity in other organism","type":"exact"}],"termid":"GO:0035918"}


id: GO:0075108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont stops, prevents, or reduces the frequency, rate or extent of the host adenylate cyclase activity, which catalyze the reaction: ATP = 3',5'-cyclic AMP + diphosphate. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by symbiont of host adenylate cyclase activity (obsolete GO:0075108)","synonyms":[{"name":"Negative regulation by symbiont of host 3',5'-cyclic AMP synthetase activity","type":"exact"},{"name":"Negative regulation by symbiont of host ATP diphosphate-lyase (cyclizing ; 3',5'-cyclic-AMP-forming) activity","type":"exact"},{"name":"Negative regulation by symbiont of host ATP diphosphate-lyase (cyclizing) activity","type":"exact"},{"name":"Negative regulation by symbiont of host ATP pyrophosphate-lyase activity","type":"exact"},{"name":"Negative regulation by symbiont of host adenyl cyclase activity","type":"exact"},{"name":"Negative regulation by symbiont of host adenylyl cyclase activity","type":"exact"},{"name":"Negative regulation by symbiont of host adenylylcyclase activity","type":"exact"},{"name":"Negative regulation by symbiont of host cAMP generating peptide activity","type":"related"}],"termid":"GO:0075108"}


id: MOD:01936
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-oleoyl-L-lysine.","definition_xrefs":["RESID:AA0590","PubMed:20942504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"N-oleoylated residue","termid":"MOD:02011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-oleoyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-([(9Z)-octadec-9-enoyl]amino)hexanoic acid","type":"exact"},{"name":"N6-[(9Z)-1-oxo-9-octadecenyl]lysine","type":"exact"},{"name":"N6-oleoyl-L-lysine","type":"exact"}],"termid":"MOD:01936"}


id: GO:0051327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle phase during which nuclear division occurs, and which is comprises the phases: prophase, metaphase, anaphase and telophase and occurs as part of a meiotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"M phase","termid":"GO:0000279"},{"relation_name":"is_a","term_name":"meiotic cell cycle phase","termid":"GO:0098762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"meiotic M phase","synonyms":[{"name":"M phase of meiotic cell cycle","type":"exact"}],"termid":"GO:0051327"}


id: SO:0002117
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0002117 <new term> (obsolete SO:0002117)","termid":"SO:0002117"}


id: FYPO:0002686
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of trehalose measured in a spore is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular trehalose level","termid":"FYPO:0002685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular trehalose level in spore","synonyms":[{"name":"increased trehalose accumulation in spore","type":"related"}],"termid":"FYPO:0002686"}


id: PBO:0088542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Sec22","termid":"PBO:0088542"}


id: GO:0048151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The excessive phosphorylation of a protein, as a result of activation of kinases, deactivation of phosphatases, or both.","definition_xrefs":["GOC:jid","PMID:12859672","ISBN:039751820X"],"gene_count":0,"genotype_count":0,"name":"obsolete hyperphosphorylation (obsolete GO:0048151)","synonyms":[{"name":"hyperphosphorylation","type":"exact"}],"termid":"GO:0048151"}


id: PBO:0060092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 39","termid":"PBO:0060092"}


id: GO:0090220
data:
  {"annotated_genes":["SJAG_03685","SJAG_03092","SJAG_05260","SJAG_01263","SJAG_01538","SJAG_05226","SJAG_03287","SJAG_01777","SJAG_00756","SJAG_03680","SJAG_05196"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85831,101994],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070197"},{"annotations":[85832,95977,98883,83477,101147],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032121"},{"annotations":[113764,112011,83478,92780,113626,101995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045141"},{"annotations":[110054,101996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044821"}]},"cv_name":"biological_process","definition":"The directed movement of a chromosome to the nuclear envelope that contributes to homologous chromosome segregation and precedes synapsis.","definition_xrefs":["GOC:tb","PMID:19913287","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of chromosome localization","termid":"GO:0051303"},{"relation_name":"part_of","term_name":"homologous chromosome segregation","termid":"GO:0045143"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00756":null,"SJAG_01263":null,"SJAG_01538":null,"SJAG_01777":null,"SJAG_03092":null,"SJAG_03287":null,"SJAG_03680":null,"SJAG_03685":null,"SJAG_05196":null,"SJAG_05226":null,"SJAG_05260":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0007049","GO:0140013","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"chromosome localization to nuclear envelope involved in homologous chromosome segregation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"chromosome localisation to nuclear envelope involved in homologous chromosome segregation","type":"exact"}],"termid":"GO:0090220","terms_by_termid":{"GO:0032121":null,"GO:0044821":null,"GO:0045141":null,"GO:0070197":null}}


id: PBO:0048532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GEMIN7 antisense RNA 1","termid":"PBO:0048532"}


id: GO:0106302
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an NADPH- and oxygen-dependent reaction that converts arachidonic acid to cis-8,9-epoxyeicosatrienoic acid.","definition_xrefs":["PMID:8246128","RHEA:64984","PMID:10491410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arachidonate epoxygenase activity","termid":"GO:0008392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"arachidonate 8,9-epoxygenase activity","synonyms":[{"name":"arachidonic acid 8,9-epoxygenase activity","type":"exact"}],"termid":"GO:0106302"}


id: GO:0090574
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex, located in the nucleus, that possesses activity that prevents or downregulates transcription from a RNA polymerase V promoter.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription repressor complex","termid":"GO:0017053"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RNA polymerase V transcription repressor complex","termid":"GO:0090574"}


id: PBO:0004719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exoribonuclease Rex4 (predicted)","termid":"PBO:0004719"}


id: PBO:0045677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein 2 intermediate chain 1","termid":"PBO:0045677"}


id: PATO:0001754
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A peramorphic growth quality which is due to an earlier onset.","definition_xrefs":["PATOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peramorphic growth","termid":"PATO:0001752"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"predisplaced growth","synonyms":[{"name":"precocious growth","type":"exact"}],"termid":"PATO:0001754"}


id: GO:0006158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete deoxyadenosine deaminase reaction (obsolete GO:0006158)","synonyms":[{"name":"deoxyadenosine deaminase reaction","type":"exact"}],"termid":"GO:0006158"}


id: GO:0098752
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plasma membrane consisting of the gene products that penetrate only the cytoplasmic side of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of the cytoplasmic side of the plasma membrane (obsolete GO:0098752)","termid":"GO:0098752"}


id: PBO:0053176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEM domain containing 1","termid":"PBO:0053176"}


id: PBO:0047780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box D2","termid":"PBO:0047780"}


id: PBO:0073686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signaling threshold regulating transmembrane adaptor 1","termid":"PBO:0073686"}


id: PBO:0075017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-28","termid":"PBO:0075017"}


id: PBO:0029843
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_acetylation","termid":"PBO:0029843"}


id: GO:0010807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptic vesicle priming. Synaptic vesicle priming is the formation of SNARE-containing complexes, bringing synaptic vesicle membrane and plasma membranes into close proximity and thereby facilitating membrane fusion.","definition_xrefs":["GOC:tb","PMID:15489511","GOC:dph","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"synaptic vesicle priming","termid":"GO:0016082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of synaptic vesicle priming","termid":"GO:0010807"}


id: SO:0001116
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A right handed helix is a region of peptide where the coiled conformation turns in a clockwise, right handed screw.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide_helix","termid":"SO:0001114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"right_handed_peptide_helix","secondary_identifiers":["BS:0000339"],"synonyms":[{"name":"helix","type":"related"},{"name":"right handed helix","type":"exact"}],"termid":"SO:0001116"}


id: GO:0042642
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The myosin part of any complex of actin, myosin, and accessory proteins.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin complex","termid":"GO:0016459"},{"relation_name":"part_of","term_name":"actomyosin","termid":"GO:0042641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015629","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"actomyosin, myosin complex part","termid":"GO:0042642"}


id: PBO:0070206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 133 pseudogene","termid":"PBO:0070206"}


id: GO:0051258
data:
  {"annotated_genes":["SJAG_02609","SJAG_03540","SJAG_02624","SJAG_02245","SJAG_02761","SJAG_02566","SJAG_04982","SJAG_01756","SJAG_00279","SJAG_02700","SJAG_07018","SJAG_03835","SJAG_02886","SJAG_00677","SJAG_04100","SJAG_00856","SJAG_02737","SJAG_03086","SJAG_00521","SJAG_01268","SJAG_01894","SJAG_04479","SJAG_01215","SJAG_01993"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94894,89880,93783,64165,88370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030041"},{"annotations":[113015],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030954"},{"annotations":[94955,110384,84326,88371],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0051016"},{"annotations":[106639,104904,105661],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007020"},{"annotations":[113020,113262,102491,96144,96443,97044],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051415"},{"annotations":[114725,97045],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051417"},{"annotations":[114210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046785"},{"annotations":[86736,97807,85895,98803,101211],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0030833"},{"annotations":[93786,110387],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0042989"}]},"cv_name":"biological_process","definition":"The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_00677":null,"SJAG_00856":null,"SJAG_01215":null,"SJAG_01268":null,"SJAG_01756":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02245":null,"SJAG_02566":null,"SJAG_02609":null,"SJAG_02624":null,"SJAG_02700":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02886":null,"SJAG_03086":null,"SJAG_03540":null,"SJAG_03835":null,"SJAG_04100":null,"SJAG_04479":null,"SJAG_04982":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"protein polymerization","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"protein polymer biosynthesis","type":"exact"},{"name":"protein polymer biosynthetic process","type":"exact"},{"name":"protein polymer formation","type":"exact"}],"termid":"GO:0051258","terms_by_termid":{"GO:0007020":null,"GO:0030041":null,"GO:0030833":null,"GO:0030954":null,"GO:0042989":null,"GO:0046785":null,"GO:0051016":null,"GO:0051415":null,"GO:0051417":null}}


id: FYPO:0007805
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the ATP hydrolysis-dependent activity that loads H3-H4 histone dimers onto DNA is absent.","definition_xrefs":["PMID:31848341","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal H3-H4 dimer loading onto DNA","termid":"FYPO:0007804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000654","FYPO:0000641","FYPO:0000661","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished H3-H4 dimer loading onto DNA","synonyms":[{"name":"abolished H3-H4 dimer loading activity","type":"exact"},{"name":"abolished histone H3-H4 dimer loading activity","type":"exact"}],"termid":"FYPO:0007805"}


id: PBO:0050726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 12","termid":"PBO:0050726"}


id: PBO:0049943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIC ZBTB transcriptional repressor 1","termid":"PBO:0049943"}


id: PBO:0062822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OSER1 divergent transcript","termid":"PBO:0062822"}


id: PBO:0072585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA processing 7 homolog B, pseudogene","termid":"PBO:0072585"}


id: FYPO:0002254
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the telomere is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"abnormal telomere morphology","termid":"FYPO:0006508"},{"relation_name":"output_of","term_name":"abnormal telomere maintenance during vegetative growth","termid":"FYPO:0000122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000293","FYPO:0001985"],"is_obsolete":false,"name":"abnormal telomere morphology during vegetative growth","synonyms":[{"name":"abnormal telomere morphology during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002254"}


id: GO:0004234
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of soluble and insoluble elastin. Specific cleavages are also produced at Ala14-Leu15 and Tyr16-Leu17 in the B chain of insulin.","definition_xrefs":["EC:3.4.24.65"],"gene_count":0,"genotype_count":0,"name":"obsolete macrophage elastase activity (obsolete GO:0004234)","secondary_identifiers":["MetaCyc:3.4.24.65-RXN"],"synonyms":[{"name":"MMP-12","type":"exact"},{"name":"human macrophage metalloelastase (HME)","type":"related"},{"name":"macrophage elastase activity","type":"exact"},{"name":"matrix metalloproteinase 12 activity","type":"related"},{"name":"metalloelastase activity","type":"related"},{"name":"metalloesterase activity","type":"exact"}],"termid":"GO:0004234"}


id: GO:0042371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any of the forms of vitamin K, quinone-derived vitamins which are involved in the synthesis of blood-clotting factors in mammals.","definition_xrefs":["GOC:jl","PMID:24489112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"fat-soluble vitamin biosynthetic process","termid":"GO:0042362"},{"relation_name":"is_a","term_name":"vitamin K metabolic process","termid":"GO:0042373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0008150"],"is_obsolete":false,"name":"vitamin K biosynthetic process","synonyms":[{"name":"naphthoquinone metabolic process","type":"broad"},{"name":"naphthoquinone metabolism","type":"broad"},{"name":"vitamin K anabolism","type":"exact"},{"name":"vitamin K biosynthesis","type":"exact"},{"name":"vitamin K formation","type":"exact"},{"name":"vitamin K synthesis","type":"exact"}],"termid":"GO:0042371"}


id: FYPO:0002335
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing is normal (i.e. indistinguishable from wild type). Chromatin silencing is the observed effect of processes that repress transcription in a region of the genome that is normally assembled into heterochromatin or CENP-A-containing chromatin (the latter is found at the centromere central core).","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal chromatin silencing","synonyms":[{"name":"normal chromatin silencing during mitotic cell cycle","type":"related"},{"name":"normal chromatin silencing during vegetative growth","type":"exact"}],"termid":"FYPO:0002335"}


id: PBO:0049799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex P5","termid":"PBO:0049799"}


id: GO:0051681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 6-alpha-maltosylglucose, also known as isopanose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide catabolic process","termid":"GO:0009313"},{"relation_name":"is_a","term_name":"6-alpha-maltosylglucose metabolic process","termid":"GO:0051679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"6-alpha-maltosylglucose catabolic process","synonyms":[{"name":"isopanose catabolic process","type":"exact"},{"name":"isopanose catabolism","type":"exact"}],"termid":"GO:0051681"}


id: GO:0043657
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell within a host organism. Includes the host plasma membrane and any external encapsulating structures such as the host cell wall and cell envelope.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cellular component","termid":"GO:0018995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell","termid":"GO:0043657"}


id: MOD:00138
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue into 2-oxobutanoic acid.","definition_xrefs":["PubMed:2253617","PubMed:1680314","PubMed:2764678","PubMed:15023056","RESID:AA0129","Unimod:385#T","ChEBI:149508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"},{"relation_name":"is_a","term_name":"deaminated residue","termid":"MOD:01160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-oxobutanoic acid","synonyms":[{"name":"2-ketobutyric acid","type":"exact"},{"name":"2-oxobutanoic acid","type":"exact"},{"name":"2-oxobutyric acid","type":"exact"},{"name":"Ammonia-loss","type":"related"},{"name":"Loss of ammonia","type":"related"},{"name":"MOD_RES 2-oxobutanoic acid","type":"exact"}],"termid":"MOD:00138"}


id: GO:0000803
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chromosome involved in sex determination.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome","termid":"GO:0005694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"sex chromosome","termid":"GO:0000803"}


id: PBO:0051905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha D","termid":"PBO:0051905"}


id: GO:0090229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the red or far-red signaling pathway, the series of molecular signals initiated upon sensing by photoreceptor molecules of red light or far red light.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of red or far-red light signaling pathway","termid":"GO:0090227"},{"relation_name":"negatively_regulates","term_name":"red or far-red light signaling pathway","termid":"GO:0010017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of red or far-red light signaling pathway","synonyms":[{"name":"negative regulation of phytochrome signaling pathway","type":"exact"},{"name":"negative regulation of red or far-red light signalling pathway","type":"exact"}],"termid":"GO:0090229"}


id: GO:0022627
data:
  {"annotated_genes":["SJAG_04476","SJAG_03034","SJAG_04256","SJAG_01132","SJAG_02253","SJAG_03788","SJAG_03254","SJAG_04663","SJAG_00523","SJAG_03424","SJAG_00465","SJAG_02522","SJAG_02894","SJAG_04998","SJAG_02477","SJAG_04342","SJAG_04188","SJAG_00544","SJAG_02184","SJAG_04168","SJAG_02340","SJAG_04029","SJAG_02861","SJAG_00733","SJAG_01287","SJAG_04475","SJAG_03762","SJAG_01548","SJAG_02335","SJAG_01632","SJAG_00468","SJAG_02224","SJAG_02870","SJAG_02280","SJAG_02479","SJAG_02046","SJAG_03568","SJAG_04174","SJAG_04672","SJAG_04814","SJAG_01609","SJAG_02020","SJAG_04695","SJAG_01512","SJAG_01387","SJAG_01296","SJAG_02904","SJAG_00503","SJAG_04324","SJAG_01366","SJAG_00069","SJAG_01226","SJAG_03262","SJAG_02682","SJAG_03859","SJAG_04746","SJAG_02803","SJAG_02585","SJAG_03422","SJAG_04204","SJAG_02749"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73721,83733,83734,84710,84711,84745,84746,84993,84994,86616,86617,87061,87062,87416,87648,89060,89061,89573,89574,89727,89728,89729,90614,90615,90811,90963,90964,91735,91736,92405,92406,92493,92494,92629,93473,93474,94396,94397,94694,94695,94721,94722,95215,95216,95410,95712,95713,95851,95852,96101,96102,96523,96833,96834,97606,97607,97780,97781,97782,99874,99918,99924,100305,100306,100490,101445,101446,101472,101473,101607,101710,101711,101722,101723,102099,102100,102129,102751,102752,102847,102848,103963,103964,106032,106669,107466,107467,107666,107667,107668,108394,108395,109167,109168,109487,109488,109489,110260,110261,110611,110612,112367,112368,112505,113480,113486,114766],"is_not":false,"summary":null,"term":"GO:0022627"}]},"cv_name":"cellular_component","definition":"The small subunit of a ribosome located in the cytosol.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small ribosomal subunit","termid":"GO:0015935"},{"relation_name":"part_of","term_name":"cytosolic ribosome","termid":"GO:0022626"}],"gene_count":61,"genes_by_uniquename":{"SJAG_00069":null,"SJAG_00465":null,"SJAG_00468":null,"SJAG_00503":null,"SJAG_00523":null,"SJAG_00544":null,"SJAG_00733":null,"SJAG_01132":null,"SJAG_01226":null,"SJAG_01287":null,"SJAG_01296":null,"SJAG_01366":null,"SJAG_01387":null,"SJAG_01512":null,"SJAG_01548":null,"SJAG_01609":null,"SJAG_01632":null,"SJAG_02020":null,"SJAG_02046":null,"SJAG_02184":null,"SJAG_02224":null,"SJAG_02253":null,"SJAG_02280":null,"SJAG_02335":null,"SJAG_02340":null,"SJAG_02477":null,"SJAG_02479":null,"SJAG_02522":null,"SJAG_02585":null,"SJAG_02682":null,"SJAG_02749":null,"SJAG_02803":null,"SJAG_02861":null,"SJAG_02870":null,"SJAG_02894":null,"SJAG_02904":null,"SJAG_03034":null,"SJAG_03254":null,"SJAG_03262":null,"SJAG_03422":null,"SJAG_03424":null,"SJAG_03568":null,"SJAG_03762":null,"SJAG_03788":null,"SJAG_03859":null,"SJAG_04029":null,"SJAG_04168":null,"SJAG_04174":null,"SJAG_04188":null,"SJAG_04204":null,"SJAG_04256":null,"SJAG_04324":null,"SJAG_04342":null,"SJAG_04475":null,"SJAG_04476":null,"SJAG_04663":null,"SJAG_04672":null,"SJAG_04695":null,"SJAG_04746":null,"SJAG_04814":null,"SJAG_04998":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0022626"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0022626","GO:0032991","GO:0005829"],"is_obsolete":false,"name":"cytosolic small ribosomal subunit","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0030499","GO:0009283","GO:0005843","GO:0030873"],"synonyms":[{"name":"30S ribosomal subunit","type":"narrow"},{"name":"40S ribosomal subunit","type":"narrow"},{"name":"eukaryotic ribosomal SSU","type":"narrow"},{"name":"prokaryotic small ribosomal subunit","type":"narrow"}],"termid":"GO:0022627","terms_by_termid":{"GO:0022627":null}}


id: PBO:0051301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-39","termid":"PBO:0051301"}


id: PBO:0045598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 9 (pseudogene)","termid":"PBO:0045598"}


id: PBO:0086879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transcription factor; contains a Zn(II)2Cys6 zinc finger domain characteristic of DNA-binding proteins; computational analysis suggests a role in regulation of expression of genes encoding transporters; binds Sin3p in a two-hybrid assay;","termid":"PBO:0086879"}


id: GO:0051214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An RNAi-mediated post-transcriptional gene silencing pathway induced by RNA viruses leading to a sequence-specific degradation of target mRNAs or inhibition of translation. In plants, DCL4 is the primary Dicer to detect RNA viruses.","definition_xrefs":["PMID:15165191","PMID:17693253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNAi-mediated antiviral immune response","termid":"GO:0009616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"RNAi-mediated antiviral immunity against RNA virus","synonyms":[{"name":"RNA VIGS","type":"exact"},{"name":"RNA virus induced gene silencing","type":"exact"},{"name":"RNA virus-induced PTGS","type":"exact"},{"name":"RNA virus-induced gene silencing","type":"exact"}],"termid":"GO:0051214"}


id: PATO:0000526
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000526 absolute drug sensitivity value (obsolete PATO:0000526)","termid":"PATO:0000526"}


id: GO:0050446
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N,N-dimethyl-1,4-phenylenediamine + aniline + NADP+ = 4-(dimethylamino)azobenzene + NADPH + H+.","definition_xrefs":["EC:1.7.1.6","MetaCyc:AZOBENZENE-REDUCTASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor","termid":"GO:0046857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"azobenzene reductase activity","secondary_identifiers":["RHEA:16269","UM-BBD_reactionID:r0808"],"synonyms":[{"name":"N,N-dimethyl-1,4-phenylenediamine, aniline:NADP+ oxidoreductase activity","type":"related"},{"name":"N,N-dimethyl-4-phenylazoaniline azoreductase activity","type":"related"},{"name":"NAD(P)H:1-(4'-sulfophenylazo)-2-naphthol oxidoreductase activity","type":"related"},{"name":"NADPH-dependent azoreductase activity","type":"broad"},{"name":"NADPH2-dependent azoreductase activity","type":"related"},{"name":"NADPH2:4-(dimethylamino)azobenzene oxidoreductase activity","type":"related"},{"name":"NADPH:4-(dimethylamino)azobenzene oxidoreductase activity","type":"related"},{"name":"NC-reductase activity","type":"narrow"},{"name":"New coccine (NC)-reductase activity","type":"narrow"},{"name":"azo reductase activity","type":"broad"},{"name":"azo-dye reductase activity","type":"broad"},{"name":"azoreductase activity","type":"broad"},{"name":"dibromopropylaminophenylazobenzoic azoreductase activity","type":"related"},{"name":"dimethylaminobenzene reductase activity","type":"related"},{"name":"methyl red azoreductase activity","type":"narrow"},{"name":"new coccine (NC)-reductase","type":"related"},{"name":"nicotinamide adenine dinucleotide (phosphate) azoreductase activity","type":"related"},{"name":"orange I azoreductase activity","type":"narrow"},{"name":"orange II azoreductase activity","type":"narrow"},{"name":"p-aminoazobenzene reductase activity","type":"related"},{"name":"p-dimethylaminoazobenzene azoreductase activity","type":"related"}],"termid":"GO:0050446"}


id: PBO:0082595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Class E Vps protein of the ESCRT-III complex; required for sorting of integral membrane proteins into lumenal vesicles of multivesicular bodies, and for delivery of newly synthesized vacuolar enzymes to the vacuole, involved in endocytosis","termid":"PBO:0082595"}


id: GO:0035041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Unwinding of the condensed nuclear chromatin of an inactive male pronucleus after fertilization.","definition_xrefs":["PMID:11735001","PMID:23352575","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin organization","termid":"GO:0006325"},{"relation_name":"part_of","term_name":"male pronucleus assembly","termid":"GO:0035039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0006325","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"sperm DNA decondensation","synonyms":[{"name":"sperm chromatin decondensation","type":"exact"}],"termid":"GO:0035041"}


id: PBO:0090833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S25","termid":"PBO:0090833"}


id: GO:0014813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a satellite cell.","definition_xrefs":["GOC:mtg_muscle","GOC:ef","PMID:16607119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"skeletal muscle satellite cell differentiation","termid":"GO:0014816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle satellite cell commitment","termid":"GO:0014813"}


id: PBO:0066244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif single stranded interacting protein 1 pseudogene 1","termid":"PBO:0066244"}


id: GO:0014811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of skeletal muscle contraction via the regulation of the release of sequestered calcium ion by sarcoplasmic reticulum into cytosol. The sarcoplasmic reticulum is the endoplasmic reticulum of striated muscle, specialised for the sequestration of calcium ions that are released upon receipt of a signal relayed by the T tubules from the neuromuscular junction.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion","termid":"GO:0014809"},{"relation_name":"is_a","term_name":"negative regulation of striated muscle contraction","termid":"GO:0045988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion","termid":"GO:0014811"}


id: GO:0070063
data:
  {"annotated_genes":["SJAG_02898","SJAG_03118","SJAG_00448","SJAG_00483","SJAG_00139","SJAG_01707","SJAG_04933","SJAG_01744","SJAG_04353","SJAG_02691","SJAG_00809","SJAG_01610","SJAG_02203","SJAG_01151"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76639],"is_not":false,"summary":null,"term":"GO:0070063"},{"annotations":[66504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043175"},{"annotations":[70534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001042"},{"annotations":[64419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099122"},{"annotations":[71449,76905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990269"},{"annotations":[77489,77470,75079,71393,70134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000993"},{"annotations":[75356,77154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001139"},{"annotations":[72588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000994"}]},"cv_name":"molecular_function","definition":"Binding to an RNA polymerase molecule or complex.","definition_xrefs":["GOC:BHF","GOC:mah","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00139":null,"SJAG_00448":null,"SJAG_00483":null,"SJAG_00809":null,"SJAG_01151":null,"SJAG_01610":null,"SJAG_01707":null,"SJAG_01744":null,"SJAG_02203":null,"SJAG_02691":null,"SJAG_02898":null,"SJAG_03118":null,"SJAG_04353":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"RNA polymerase binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0070063","terms_by_termid":{"GO:0000993":null,"GO:0000994":null,"GO:0001042":null,"GO:0001139":null,"GO:0043175":null,"GO:0070063":null,"GO:0099122":null,"GO:1990269":null}}


id: PBO:0055829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and calponin homology domain containing 4","termid":"PBO:0055829"}


id: PBO:0086163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for ribosomal large subunit maturation; functionally redundant with Ssf1p; member of the Brix family; SSF2 has a paralog, SSF1, that arose from the whole genome duplication","termid":"PBO:0086163"}


id: PBO:0033830
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Overexpression causing Deoxyglucose Resistance","termid":"PBO:0033830"}


id: PBO:0081926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 968, pseudogene","termid":"PBO:0081926"}


id: PBO:0062975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 5","termid":"PBO:0062975"}


id: PBO:0057561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 718","termid":"PBO:0057561"}


id: PBO:0049890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERC2 pseudogene 9","termid":"PBO:0049890"}


id: PBO:0063477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide isomerase family A member 5","termid":"PBO:0063477"}


id: GO:1901073
data:
  {"annotated_genes":["SJAG_04728","SJAG_02845","SJAG_03723","SJAG_01453","SJAG_00442","SJAG_00978","SJAG_04868"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100712,98701,84263,84601,84773,98848,106099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006031"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glucosamine-containing compounds (glucosamines).","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino sugar biosynthetic process","termid":"GO:0046349"},{"relation_name":"is_a","term_name":"glucosamine-containing compound metabolic process","termid":"GO:1901071"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00442":null,"SJAG_00978":null,"SJAG_01453":null,"SJAG_02845":null,"SJAG_03723":null,"SJAG_04728":null,"SJAG_04868":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glucosamine-containing compound biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glucosamine-containing compound anabolism","type":"exact"},{"name":"glucosamine-containing compound biosynthesis","type":"exact"},{"name":"glucosamine-containing compound formation","type":"exact"},{"name":"glucosamine-containing compound synthesis","type":"exact"},{"name":"glucosamines anabolism","type":"exact"},{"name":"glucosamines biosynthesis","type":"exact"},{"name":"glucosamines biosynthetic process","type":"exact"},{"name":"glucosamines formation","type":"exact"},{"name":"glucosamines synthesis","type":"exact"}],"termid":"GO:1901073","terms_by_termid":{"GO:0006031":null}}


id: GO:0021935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The early migration of granule cell precursors in which cells move orthogonal to the direction of radial migration and ultimately cover the superficial zone of the cerebellar primordium.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:jid","GOC:dph","PMID:15157725","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hindbrain tangential cell migration","termid":"GO:0021934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar granule cell precursor tangential migration","termid":"GO:0021935"}


id: PBO:0060138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melatonin receptor 1B","termid":"PBO:0060138"}


id: GO:0071398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fatty acid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fatty acid","termid":"GO:0070542"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to fatty acid","termid":"GO:0071398"}


id: GO:0035062
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nucleoplasmic speckle distributed in the interchromatin space of cells in close proximity to chromatin. Omega speckles are distinct from interchromatin granules and contain heterogeneous nuclear RNA-binding proteins (hnRNPs).","definition_xrefs":["GOC:bf","PMID:10984439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear speck","termid":"GO:0016607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005654","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"omega speckle","termid":"GO:0035062"}


id: FYPO:0002158
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mitotic cell cycle arrest that normally occurs in response to G2/M transition DNA damage checkpoint signaling does not occur. Abolished arrest may result from a problem with detection of conditions that normally trigger a checkpoint, transduction of the checkpoint signal, or the response to the checkpoint signal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished response to mitotic G2/M transition checkpoint signaling","termid":"FYPO:0002519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000298","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"abolished response to mitotic G2/M transition DNA damage checkpoint signaling","synonyms":[{"name":"abolished mitotic G2/M transition DNA damage checkpoint arrest","type":"related"},{"name":"abolished response to mitotic G2 DNA damage checkpoint signaling","type":"exact"},{"name":"cell cycle arrest resulting from mitotic G2/M transition DNA damage activation abolished","type":"exact"},{"name":"response to mitotic G2/M transition DNA damage checkpoint signaling abolished","type":"exact"}],"termid":"FYPO:0002158"}


id: PBO:0054528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1928","termid":"PBO:0054528"}


id: PBO:0004048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminopeptidase Ape2 (predicted)","termid":"PBO:0004048"}


id: PBO:0063048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paralemmin 3","termid":"PBO:0063048"}


id: GO:2000034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of seed maturation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of seed development","termid":"GO:0080050"},{"relation_name":"regulates","term_name":"seed maturation","termid":"GO:0010431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of seed maturation","termid":"GO:2000034"}


id: PBO:0064982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progenitor renewal associated non-coding RNA","termid":"PBO:0064982"}


id: GO:0021810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Signaling by neurotransmitters and their receptors that results in the initiation of movement of cells as a component of the process of glial-mediated radial migration.","definition_xrefs":["GO_REF:0000021","GOC:jid","GOC:dph","GOC:cls","PMID:12626695","GOC:dgh"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotransmitter signaling initiating cell movement, involved in cerebral cortex radial glia guided migration (obsolete GO:0021810)","synonyms":[{"name":"neurotransmitter signalling initiating cell movement, involved in cerebral cortex glial-mediated radial migration","type":"exact"}],"termid":"GO:0021810"}


id: GO:0071752
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dimeric form of secretory IgA immunoglobulin complex.","definition_xrefs":["ISBN:0781765196","GOC:add","PMID:16362985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dimeric IgA immunoglobulin complex","termid":"GO:0071750"},{"relation_name":"is_a","term_name":"secretory IgA immunoglobulin complex","termid":"GO:0071751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005576","GO:0032991"],"is_obsolete":false,"name":"secretory dimeric IgA immunoglobulin complex","synonyms":[{"name":"secretory dimeric IgA antibody","type":"exact"},{"name":"secretory dimeric IgA1 antibody","type":"narrow"}],"termid":"GO:0071752"}


id: FYPO:0004958
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in the mitochondrion differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"},{"relation_name":"is_a","term_name":"altered level of substance in mitochondrion","termid":"FYPO:0004957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"altered RNA level in mitochondrion","synonyms":[{"name":"abnormal RNA level in mitochondrion","type":"exact"},{"name":"abnormal RNA level in mitochondrion during vegetative growth","type":"exact"},{"name":"abnormal mitochondrial RNA level","type":"exact"},{"name":"abnormal mitochondrial RNA level during vegetative growth","type":"exact"},{"name":"altered RNA level in mitochondrion during mitotic cell cycle","type":"related"},{"name":"altered mitochondrial RNA level","type":"exact"},{"name":"altered transcript level in mitochondrion","type":"exact"}],"termid":"FYPO:0004958"}


id: PR:O59856
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl33 gene.","definition_xrefs":["UniProtKB:O59856","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L33, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.08c","synonyms":[{"name":"Spom972h-mrpl33","type":"exact"}],"termid":"PR:O59856"}


id: GO:0030804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cyclic nucleotides.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cyclic nucleotide biosynthetic process (obsolete GO:0030804)","synonyms":[{"name":"activation of cyclic nucleotide biosynthetic process","type":"narrow"},{"name":"positive regulation of cyclic nucleotide anabolism","type":"exact"},{"name":"positive regulation of cyclic nucleotide biosynthesis","type":"exact"},{"name":"positive regulation of cyclic nucleotide formation","type":"exact"},{"name":"positive regulation of cyclic nucleotide synthesis","type":"exact"},{"name":"stimulation of cyclic nucleotide biosynthetic process","type":"narrow"},{"name":"up regulation of cyclic nucleotide biosynthetic process","type":"exact"},{"name":"up-regulation of cyclic nucleotide biosynthetic process","type":"exact"},{"name":"upregulation of cyclic nucleotide biosynthetic process","type":"exact"}],"termid":"GO:0030804"}


id: PBO:0053927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1226","termid":"PBO:0053927"}


id: GO:0018205
data:
  {"annotated_genes":["SJAG_01985","SJAG_02082","SJAG_00604","SJAG_02503","SJAG_03843","SJAG_01776","SJAG_05032","SJAG_00727"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57437],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0033234"},{"annotations":[85821,92267,105603,85662,110710,93819,100530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016925"}]},"cv_name":"biological_process","definition":"The modification of peptidyl-lysine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00604":null,"SJAG_00727":null,"SJAG_01776":null,"SJAG_01985":null,"SJAG_02082":null,"SJAG_02503":null,"SJAG_03843":null,"SJAG_05032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine modification","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0018205","terms_by_termid":{"GO:0016925":null,"GO:0033234":null}}


id: PBO:0108572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rix1 complex armadillo-type fold Rix1","termid":"PBO:0108572"}


id: FYPO:0000976
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to selenite ions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to chemical stimulus during vegetative growth","termid":"FYPO:0001318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0000298","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular response to selenite ion","synonyms":[{"name":"normal cellular response to selenite","type":"exact"},{"name":"normal cellular response to selenite ion during mitotic cell cycle","type":"related"},{"name":"normal cellular response to selenite ion during vegetative growth","type":"exact"}],"termid":"FYPO:0000976"}


id: MOD:00917
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-threonine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-threonine residue","synonyms":[{"name":"ModThr","type":"exact"}],"termid":"MOD:00917"}


id: PBO:0005374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit VIIa (predicted)","termid":"PBO:0005374"}


id: PBO:0079059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 14-1","termid":"PBO:0079059"}


id: GO:0016411
data:
  {"annotated_genes":["SJAG_01957","SJAG_03935","SJAG_03609","SJAG_04792","SJAG_04041"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106586],"is_not":false,"summary":null,"term":"GO:0016411"},{"annotations":[87229,86100,100043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003841"},{"annotations":[110253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003846"},{"annotations":[110254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004144"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an acyl group to an oxygen atom on the acylglycerol molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01957":null,"SJAG_03609":null,"SJAG_03935":null,"SJAG_04041":null,"SJAG_04792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"acylglycerol O-acyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1482647","Reactome:R-HSA-1482654"],"termid":"GO:0016411","terms_by_termid":{"GO:0003841":null,"GO:0003846":null,"GO:0004144":null,"GO:0016411":null}}


id: GO:0060228
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of phosphatidylcholine-sterol O-acyltransferase.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph","PMID:4335615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0140677","GO:0003674","GO:0098772","GO:0030234"],"is_obsolete":false,"name":"phosphatidylcholine-sterol O-acyltransferase activator activity","synonyms":[{"name":"LCAT activator activity","type":"narrow"}],"termid":"GO:0060228"}


id: PBO:0091787
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Premature Initiation of Mitosis","termid":"PBO:0091787"}


id: GO:2000285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of regulation of excitatory postsynaptic membrane potential.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of regulation of excitatory postsynaptic membrane potential (obsolete GO:2000285)","synonyms":[{"name":"negative regulation of EPSP","type":"related"},{"name":"negative regulation of regulation of excitatory postsynaptic membrane potential","type":"exact"}],"termid":"GO:2000285"}


id: GO:0035580
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of a specific granule, a granule with a membranous, tubular internal structure, found primarily in mature neutrophil cells. Most are released into the extracellular fluid. Specific granules contain lactoferrin, lysozyme, vitamin B12 binding protein and elastase.","definition_xrefs":["GOC:bf","PMID:7334549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule lumen","termid":"GO:0034774"},{"relation_name":"part_of","term_name":"specific granule","termid":"GO:0042581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"specific granule lumen","synonyms":[{"name":"secondary granule lumen","type":"exact"}],"termid":"GO:0035580"}


id: GO:0050497
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an alkylthio group from one compound (donor) to another (acceptor).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring sulphur-containing groups","termid":"GO:0016782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016782","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"alkylthioltransferase activity","secondary_identifiers":["EC:2.8.4.-"],"synonyms":[{"name":"transferase activity, transferring alkylthio groups","type":"exact"}],"termid":"GO:0050497"}


id: PBO:0078541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 33","termid":"PBO:0078541"}


id: PBO:0039310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkB homolog 4, lysine demethylase","termid":"PBO:0039310"}


id: PBO:0041965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 8","termid":"PBO:0041965"}


id: PBO:0055230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2656","termid":"PBO:0055230"}


id: FYPO:0002354
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein encoded by heterochromatic genes that are normally silenced is higher than normal.","definition_xrefs":["PomBase:mah","PMID:22683269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased level of heterochromatin-encoded proteins","synonyms":[{"name":"increased level of heterochromatin-encoded proteins during mitotic cell cycle","type":"related"},{"name":"increased level of heterochromatin-encoded proteins during vegetative growth","type":"exact"}],"termid":"FYPO:0002354"}


id: PR:Q10239
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- chz1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A.Z-specific chaperone chz1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.06c","synonyms":[{"name":"Spom972h-chz1","type":"exact"}],"termid":"PR:Q10239"}


id: PBO:0076355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin like 2","termid":"PBO:0076355"}


id: GO:0070942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed killing of a target cell by a neutrophil.","definition_xrefs":["GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte mediated cytotoxicity","termid":"GO:0001909"},{"relation_name":"is_a","term_name":"neutrophil mediated immunity","termid":"GO:0002446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil mediated cytotoxicity","synonyms":[{"name":"neutrophil mediated cell killing","type":"exact"}],"termid":"GO:0070942"}


id: GO:0019477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-lysine, the L-enantiomer of (S)-2,6-diaminohexanoic acid.","definition_xrefs":["GOC:go_curators","GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysine catabolic process","termid":"GO:0006554"},{"relation_name":"is_a","term_name":"aspartate family amino acid catabolic process","termid":"GO:0009068"},{"relation_name":"is_a","term_name":"L-lysine metabolic process","termid":"GO:0046440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"L-lysine catabolic process","synonyms":[{"name":"L-lysine breakdown","type":"exact"},{"name":"L-lysine catabolism","type":"exact"},{"name":"L-lysine degradation","type":"exact"}],"termid":"GO:0019477"}


id: GO:0043960
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-erythro-3-methylmalyl-CoA = mesaconyl-CoA + H2O.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-erythro-3-methylmalyl-CoA dehydratase activity","termid":"GO:0043960"}


id: PBO:0113478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Synthase subunit of trehalose-6-P synthase/phosphatase complex; synthesizes the storage carbohydrate trehalose, which is critically important for survival of long-term desiccation; also found in a monomeric form; expression is induced by the stress response and repressed by the Ras-cAMP pathway; protein abundance increases in response to DNA replication stress and in response to prolonged exposure to boric acid; required for pseudohyphal growth","termid":"PBO:0113478"}


id: PBO:0086017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; SWAT-GFP, seamless-GFP and mCherry fusion proteins localize to the mitochondria; mRNA identified as translated by ribosome profiling data; MMO1 is a non-essential gene","termid":"PBO:0086017"}


id: PR:O14222
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fsv1 gene.","definition_xrefs":["UniProtKB:O14222","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin-like protein fsv1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.03c","synonyms":[{"name":"Spom972h-fsv1","type":"exact"}],"termid":"PR:O14222"}


id: PBO:0047871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(2)(q22.3)","termid":"PBO:0047871"}


id: PBO:0064986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich protein BstNI subfamily 3","termid":"PBO:0064986"}


id: GO:0010265
data:
  {"annotated_genes":["SJAG_05297"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85313],"is_not":false,"summary":null,"term":"GO:0010265"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the SKP1-Cullin/Cdc53-F-box protein ubiquitin ligase (SCF) complex.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05297":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"SCF complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010265","terms_by_termid":{"GO:0010265":null}}


id: RO:0002112
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Relation between a muscle and a motor neuron that synapses to it via a type Is bouton.","direct_ancestors":[{"relation_name":"is_a","term_name":"synapsed_by","termid":"RO:0002103"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapsed_by_via_type_Is_bouton","termid":"RO:0002112"}


id: SO:0001742
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence alteration whereby the copy number of a given regions is greater than the reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copy_number_variation","termid":"SO:0001019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copy_number_gain","synonyms":[{"name":"copy number gain","type":"exact"},{"name":"gain","type":"related"}],"termid":"SO:0001742"}


id: GO:0097031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The biogenesis of a mitochondrial respiratory chain complex I, a protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Includes the synthesis of constituent proteins and their aggregation, arrangement and bonding together.","definition_xrefs":["GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial respiratory chain complex I biogenesis (obsolete GO:0097031)","termid":"GO:0097031"}


id: PBO:0047502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FER tyrosine kinase","termid":"PBO:0047502"}


id: SO:0001094
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the polypeptide molecule, interacts selectively and non-covalently with calcium ions.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_metal_contact","termid":"SO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_calcium_ion_contact_site","secondary_identifiers":["BS:00186"],"synonyms":[{"name":"Ca_contact_site","type":"exact"},{"name":"ca bind","type":"related"},{"name":"ca_bind","type":"exact"},{"name":"polypeptide calcium ion contact site","type":"exact"}],"termid":"SO:0001094"}


id: PBO:0039121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allograft inflammatory factor 1","termid":"PBO:0039121"}


id: PATO:0001454
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sensitivity quality inhering in a bearer by virtue of the bearer's dependence on oxygen.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity toward","termid":"PATO:0000085"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensitivity to oxygen","termid":"PATO:0001454"}


id: PBO:0030829
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_phosphoribosylamine-glycine_ligase_activity","termid":"PBO:0030829"}


id: PBO:0001096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate reductase Met11","termid":"PBO:0001096"}


id: SO:0000167
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory_region composed of the TSS(s) and binding sites for TF_complexes of the core transcription machinery. A region (DNA) to which RNA polymerase binds, to begin transcription.","definition_xrefs":["SO:regcreative"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_component_region","termid":"SO:0000842"},{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter","secondary_identifiers":["http://en.wikipedia.org/wiki/Promoter"],"synonyms":[{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:promoter","type":"exact"},{"name":"promoter sequence","type":"exact"}],"termid":"SO:0000167"}


id: FYECO:0000278
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose, salts, water and with isoleucine as the nitrogen source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, isoleucine nitrogen source","termid":"FYECO:0000278"}


id: PR:Q9UT57
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytosolic Fe-S cluster assembly factor NUBP2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23264:SF9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic Fe-S cluster assembly factor SPAC806.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC806.02c","secondary_identifiers":["UniProtKB:Q9UT57"],"synonyms":[{"name":"Spom972h-NUBP2","type":"exact"}],"termid":"PR:Q9UT57"}


id: PBO:0084357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lectin-like protein with similarity to Flo1p; thought to be expressed and involved in flocculation","termid":"PBO:0084357"}


id: GO:0018095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of one or more alpha-linked glutamyl units to the gamma carboxyl group of peptidyl-glutamic acid.","definition_xrefs":["RESID:AA0202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-glutamic acid modification","termid":"GO:0018200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein polyglutamylation","termid":"GO:0018095"}


id: PBO:0080483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor A domain containing 3A","termid":"PBO:0080483"}


id: PBO:0072965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 1A member 1","termid":"PBO:0072965"}


id: PBO:0049733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HCLS1 associated protein X-1","termid":"PBO:0049733"}


id: GO:0016441
data:
  {"annotated_genes":["SJAG_03689","SJAG_02621"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115664,115665],"is_not":false,"summary":null,"term":"GO:0016441"}]},"cv_name":"biological_process","definition":"The inactivation of gene expression that occurs after transcription.","definition_xrefs":["PMID:15020054","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-transcriptional regulation of gene expression","termid":"GO:0010608"},{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"post-transcriptional gene silencing","references_by_uniquename":{"PMID:35226668":null},"secondary_identifiers":["Wikipedia:Post_transcriptional_gene_silencing"],"synonyms":[{"name":"PTGS","type":"exact"},{"name":"posttranscriptional gene silencing","type":"exact"}],"termid":"GO:0016441","terms_by_termid":{"GO:0016441":null}}


id: PBO:0073469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SFXN4 pseudogene 1","termid":"PBO:0073469"}


id: PBO:0071088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 90","termid":"PBO:0071088"}


id: PBO:0091702
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae YKR002W","termid":"PBO:0091702"}


id: GO:0001570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes.","definition_xrefs":["PMID:8999798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"blood vessel morphogenesis","termid":"GO:0048514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vasculogenesis","secondary_identifiers":["Wikipedia:Vasculogenesis"],"synonyms":[{"name":"vascular morphogenesis","type":"exact"}],"termid":"GO:0001570"}


id: PBO:0054372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1766","termid":"PBO:0054372"}


id: PBO:0039356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidohydrolase domain containing 2","termid":"PBO:0039356"}


id: PBO:0055599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3035","termid":"PBO:0055599"}


id: PBO:0074032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 19","termid":"PBO:0074032"}


id: MOD:01044
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00080. Remap to MOD:00080.","definition_xrefs":["DeltaMass:166"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01044 N-methyl glutamyl (obsolete MOD:01044)","termid":"MOD:01044"}


id: PBO:0029660
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_deadenylation-independent_decapping_of_nuclear-transcribed_mRNA","termid":"PBO:0029660"}


id: PBO:0041219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1GALT1 specific chaperone 1","termid":"PBO:0041219"}


id: GO:0070285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a pigment cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a pigment cell fate.","definition_xrefs":["GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"pigment cell differentiation","termid":"GO:0050931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment cell development","termid":"GO:0070285"}


id: PBO:0083632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EH domain-containing protein involved in endocytosis; actin cytoskeletal organization and cell wall morphogenesis; forms a complex with Sla1p and Pan1p","termid":"PBO:0083632"}


id: GO:0080096
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a phosphatidate + a sterol = a sterol ester + a lysophosphatidate.","definition_xrefs":["PMID:16020547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"phosphatidate-sterol O-acyltransferase activity","termid":"GO:0080096"}


id: PBO:0028150
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_level_of_macromolecular_complex","termid":"PBO:0028150"}


id: PBO:0000418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 2 (predicted)","termid":"PBO:0000418"}


id: GO:0018707
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-phenanthrol + X-CH3 = X + 1-methoxyphenanthrene.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-phenanthrol methyltransferase activity (obsolete GO:0018707)","termid":"GO:0018707"}


id: PR:Q9Y821
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pmc4 gene.","definition_xrefs":["UniProtKB:Q9Y821","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1105.06","synonyms":[{"name":"RNA polymerase II mediator complex protein pmc4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pmc4","type":"exact"},{"name":"mediator complex subunit 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y821"}


id: PBO:0075791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 10 pseudogene 2","termid":"PBO:0075791"}


id: PBO:0026927
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_serine_phosphorylation","termid":"PBO:0026927"}


id: PBO:0050050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, N (pseudogene)","termid":"PBO:0050050"}


id: PBO:0114115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex/TATA-binding protein associated factor/transcription factor TFIID complex WD repeat subunit Taf5","termid":"PBO:0114115"}


id: GO:0004327
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: formaldehyde + glutathione + NAD+ = S-formylglutathione + NADH + H+.","definition_xrefs":["EC:1.2.1.1"],"gene_count":0,"genotype_count":0,"name":"obsolete formaldehyde dehydrogenase (glutathione) activity (obsolete GO:0004327)","synonyms":[{"name":"formaldehyde dehydrogenase (glutathione) activity","type":"exact"}],"termid":"GO:0004327"}


id: GO:0018941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving organomercury compound, any organic compound containing a mercury atom.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete organomercury metabolic process (obsolete GO:0018941)","secondary_identifiers":["UM-BBD_pathwayID:ogm"],"synonyms":[{"name":"organomercury metabolism","type":"exact"}],"termid":"GO:0018941"}


id: GO:0034389
data:
  {"annotated_genes":["SJAG_01537","SJAG_04059","SJAG_04049","SJAG_01458","SJAG_03162","SJAG_03609","SJAG_01180","SJAG_02980"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99535],"is_not":false,"summary":null,"term":"GO:0034389"},{"annotations":[114939,84835,90709,108122,110250,92773,107045],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140042"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a lipid particle.","definition_xrefs":["GOC:dph","GOC:mah","PMID:18250201","PMID:18093937","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01180":null,"SJAG_01458":null,"SJAG_01537":null,"SJAG_02980":null,"SJAG_03162":null,"SJAG_03609":null,"SJAG_04049":null,"SJAG_04059":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipid droplet organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"adiposome organization","type":"exact"},{"name":"lipid body organization","type":"exact"},{"name":"lipid particle organisation","type":"exact"},{"name":"lipid particle organization","type":"exact"},{"name":"lipid particle organization and biogenesis","type":"broad"}],"termid":"GO:0034389","terms_by_termid":{"GO:0034389":null,"GO:0140042":null}}


id: GO:0042149
data:
  {"annotated_genes":["SJAG_03048","SJAG_03486","SJAG_00534","SJAG_01245","SJAG_02380","SJAG_02785"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85275,89027,96499,107431,112557],"is_not":false,"summary":null,"term":"GO:0042149"},{"annotations":[98450],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1904547"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of glucose.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00534":null,"SJAG_01245":null,"SJAG_02380":null,"SJAG_02785":null,"SJAG_03048":null,"SJAG_03486":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to glucose starvation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0042149","terms_by_termid":{"GO:0042149":null,"GO:1904547":null}}


id: GO:0090732
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cellular structure consisting of parallel, hexagonally arranged actin tubules, comprising filamentous actin and disulfide cross-linked cofilin multimers.","definition_xrefs":["PMID:22573689","PMID:24760020","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin rod","termid":"GO:0031002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015629"],"is_obsolete":false,"name":"cofilin-actin rod","termid":"GO:0090732"}


id: PBO:0063686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pepsinogen B, pseudogene","termid":"PBO:0063686"}


id: GO:0070672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-15 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interleukin-15","synonyms":[{"name":"response to IL-15","type":"exact"}],"termid":"GO:0070672"}


id: GO:0062119
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that associates with chromatin to form linear elements in fission yeast. In S. pombe, the LinE complex contains four main structural components (Rec10, Rec25, Rec27, and Mug20) and other associated proteins.","definition_xrefs":["PMID:30640914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"LinE complex","termid":"GO:0062119"}


id: PBO:0079539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine pyrophosphorylase 1 like 1","termid":"PBO:0079539"}


id: PBO:0016972
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in schizosaccharomyces","termid":"PBO:0016972"}


id: PBO:0048230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 2A","termid":"PBO:0048230"}


id: PBO:0076135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUCLA2 antisense RNA 1","termid":"PBO:0076135"}


id: GO:0033592
data:
  {"annotated_genes":["SJAG_01643"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103363],"is_not":false,"summary":null,"term":"GO:0033592"}]},"cv_name":"molecular_function","definition":"An activity that facilitates the formation of a complementary double-stranded RNA molecule.","definition_xrefs":["GOC:mah","PMID:7543843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-stranded RNA binding","termid":"GO:0003727"},{"relation_name":"is_a","term_name":"annealing activity","termid":"GO:0140666"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01643":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"RNA strand annealing activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033592","terms_by_termid":{"GO:0033592":null}}


id: PBO:0014295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc48-Ufd1-Npl4 complex subunit Ufd1 involved in ubiquitin-dependent protein catabolism (predicted)","termid":"PBO:0014295"}


id: PBO:0058059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4280","termid":"PBO:0058059"}


id: GO:0042646
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a plastid to which the DNA is confined.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoid","termid":"GO:0009295"},{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"plastid stroma","termid":"GO:0009532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"plastid nucleoid","termid":"GO:0042646"}


id: PBO:0031864
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-qualifier","termid":"PBO:0031864"}


id: FYPO:0009037
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of phloxine B than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"resistance to phloxine B","synonyms":[{"name":"resistance to phloxine B during mitotic cell cycle","type":"related"},{"name":"resistance to phloxine B during vegetative growth","type":"exact"},{"name":"resistant to phloxine B","type":"exact"}],"termid":"FYPO:0009037"}


id: FYPO:0000375
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which programmed cell death by apoptosis does not occur. Apoptosis is a form of cell death characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies.","definition_xrefs":["GO:0006915","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal apoptotic process","termid":"FYPO:0000629"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished apoptotic process","synonyms":[{"name":"abolished apoptosis","type":"narrow"},{"name":"absent apoptotic process","type":"exact"},{"name":"apoptosis: absent","type":"related"},{"name":"apoptotic process abolished","type":"exact"}],"termid":"FYPO:0000375"}


id: PBO:0005088
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds CSL response element 5'-GTG[G/A]GAA-3'","termid":"PBO:0005088"}


id: PBO:0089781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIA machinery involved in ribosome biogenesis protein Lto1","termid":"PBO:0089781"}


id: PBO:0055104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2522","termid":"PBO:0055104"}


id: PBO:0089588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi copper transporting ATPase Ccc2","termid":"PBO:0089588"}


id: FYPO:0002351
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which stress granule disassembly is abnormal.","definition_xrefs":["PomBase:mah","PMID:21098141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"},{"relation_name":"is_a","term_name":"abnormal protein complex organization during vegetative growth","termid":"FYPO:0007402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal stress granule disassembly","synonyms":[{"name":"abnormal cytoplasmic stress granule disassembly","type":"exact"},{"name":"abnormal stress granule disassembly during mitotic cell cycle","type":"related"},{"name":"abnormal stress granule disassembly during vegetative growth","type":"exact"}],"termid":"FYPO:0002351"}


id: PBO:0050066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLTF antisense RNA 1","termid":"PBO:0050066"}


id: SO:0002158
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene cassette array containing H- mating type specific information.","definition_xrefs":["PMID:18354497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silent_mating_type_cassette_array","termid":"SO:0001984"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mat3M","termid":"SO:0002158"}


id: PBO:0001108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glutamyl-tRNA amidotransferase beta subunit (predicted)","termid":"PBO:0001108"}


id: FYECO:0000052
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which arachidic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ arachidic acid","termid":"FYECO:0000052"}


id: PBO:0064836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 11 pseudogene 2","termid":"PBO:0064836"}


id: PBO:0043929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-reactive protein pseudogene 1","termid":"PBO:0043929"}


id: PBO:0075417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated antigen 4","termid":"PBO:0075417"}


id: PBO:0065151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arginine methyltransferase 3","termid":"PBO:0065151"}


id: FYPO:0003203
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell forms a septum that is curved.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum morphology during vegetative growth","termid":"FYPO:0002023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000032","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"curved septum","synonyms":[{"name":"curved septum during mitotic cell cycle","type":"related"},{"name":"curved septum during vegetative growth","type":"exact"}],"termid":"FYPO:0003203"}


id: PBO:0049990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine triad nucleotide binding protein 2 pseudogene 1","termid":"PBO:0049990"}


id: PBO:0068989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 233, pseudogene","termid":"PBO:0068989"}


id: SO:0000454
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 17-28-nt, small interfering RNA derived from transcripts of repetitive elements.","definition_xrefs":["PMID:18032451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"piRNA","termid":"SO:0001035"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rasiRNA","synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:rasiRNA","type":"exact"},{"name":"repeat associated small interfering RNA","type":"exact"}],"termid":"SO:0000454"}


id: PBO:0044829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 116","termid":"PBO:0044829"}


id: PBO:0066595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member J","termid":"PBO:0066595"}


id: PBO:0000018
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protease_activator","termid":"PBO:0000018"}


id: GO:0035367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of thymine, 5-methyluracil, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:bf","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound transport","termid":"GO:0032241"},{"relation_name":"is_a","term_name":"regulation of thymine transport","termid":"GO:0035365"},{"relation_name":"positively_regulates","term_name":"thymine transport","termid":"GO:0035364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of thymine transport","synonyms":[{"name":"positive regulation of 5-methyluracil transport","type":"exact"}],"termid":"GO:0035367"}


id: GO:0052581
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (6R)-isoperitenone + H+ + NADPH = (2R,5R)-isopulegone + NADP+.","definition_xrefs":["RHEA:25649","EC:1.3.1.82"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enone reductase activity","termid":"GO:0035671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"(-)-isopiperitenone reductase activity","secondary_identifiers":["KEGG_REACTION:R06417","MetaCyc:RXN-5161"],"synonyms":[{"name":"(+)-cis-isopulegone:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0052581"}


id: PBO:0042609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDRT15 pseudogene 9","termid":"PBO:0042609"}


id: GO:1905382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of snRNA transcription mediated by RNA polymerase II.","definition_xrefs":["PMID:10022900","GOC:TermGenie","GOC:bhm","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase II","termid":"GO:0045944"},{"relation_name":"is_a","term_name":"regulation of snRNA transcription by RNA polymerase II","termid":"GO:1905380"},{"relation_name":"positively_regulates","term_name":"snRNA transcription by RNA polymerase II","termid":"GO:0042795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016073"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"positively_regulates","termid":"GO:0016073"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016073","GO:0006351","GO:0008150","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"positive regulation of snRNA transcription by RNA polymerase II","synonyms":[{"name":"activation of snRNA transcription from Pol II promoter","type":"narrow"},{"name":"activation of snRNA transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of snRNA transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of snRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of snRNA transcription from Pol II promoter","type":"exact"},{"name":"up regulation of snRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of snRNA transcription from Pol II promoter","type":"exact"},{"name":"up-regulation of snRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of snRNA transcription from Pol II promoter","type":"exact"},{"name":"upregulation of snRNA transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1905382"}


id: PBO:0041045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 2","termid":"PBO:0041045"}


id: PBO:0055058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2474","termid":"PBO:0055058"}


id: PBO:0061427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 1 group D member 1","termid":"PBO:0061427"}


id: GO:0030032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lamellipodium organization","termid":"GO:0097581"},{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"lamellipodium assembly","synonyms":[{"name":"lamellipodium biogenesis","type":"related"},{"name":"lamellipodium biosynthesis","type":"exact"},{"name":"lamellipodium formation","type":"exact"}],"termid":"GO:0030032"}


id: GO:0071252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sulfur dioxide (SO2) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to sulfur dioxide","termid":"GO:0010477"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sulfur dioxide","termid":"GO:0071252"}


id: PR:000024934
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin ligase complex composed of two subunits of Schizosaccharomyces pombe E3 ubiquitin-protein ligase dma1.","definition_xrefs":["PRO:DAN","PMID:22669973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dma1 homodimer (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC17G8.10c","termid":"PR:000024934"}


id: GO:0035439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranylgeranyl diphosphate = halima-5(6),13-dien-15-yl diphosphate.","definition_xrefs":["EC:5.5.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0009975","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"halimadienyl-diphosphate synthase activity","secondary_identifiers":["RHEA:25621"],"synonyms":[{"name":"halima-5(6),13-dien-15-yl-diphosphate lyase (cyclizing)","type":"related"},{"name":"halimadienyl diphosphate synthase activity","type":"related"}],"termid":"GO:0035439"}


id: FYPO:0003620
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any unspliced or incompletely spliced mRNA precursor measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal pre-mRNA level","synonyms":[{"name":"normal pre-mRNA accumulation","type":"related"},{"name":"normal pre-mRNA level during mitotic cell cycle","type":"related"},{"name":"normal pre-mRNA level during vegetative growth","type":"exact"},{"name":"normal pre-mRNA transcript level","type":"exact"}],"termid":"FYPO:0003620"}


id: PBO:0038390
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_severity","termid":"PBO:0038390"}


id: PBO:0082033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"18kDa catalytic subunit of the Signal Peptidase Complex (SPC); the Signal Peptidase Complex cleaves the signal sequence of proteins targeted to the endoplasmic reticulum; other members are Spc1p, Spc2p, Spc3p, and Sec11p","termid":"PBO:0082033"}


id: GO:0043203
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Portion of the neuronal cell soma from which the axon originates.","definition_xrefs":["GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axon","termid":"GO:0030424"},{"relation_name":"part_of","term_name":"neuronal cell body","termid":"GO:0043025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"axon hillock","secondary_identifiers":["NIF_Subcellular:sao627227260","Wikipedia:Axon_hillock"],"termid":"GO:0043203"}


id: FYPO:0003584
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of double-strand break repair via nonhomologous end joining (NHEJ) is increased. NHEJ is the repair of double-strand breaks in DNA in which the two broken ends are rejoined with little or no sequence complementarity.","definition_xrefs":["GO:0006303","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal double-strand break repair during vegetative growth","termid":"FYPO:0000777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000293","FYPO:0001320","FYPO:0000298","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased double-strand break repair via nonhomologous end joining","synonyms":[{"name":"increased NHEJ","type":"exact"},{"name":"increased double-strand break repair via nonhomologous end joining during mitotic cell cycle","type":"related"},{"name":"increased double-strand break repair via nonhomologous end joining during vegetative growth","type":"exact"},{"name":"increased nonhomologous end joining","type":"exact"}],"termid":"FYPO:0003584"}


id: PBO:0068063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 368","termid":"PBO:0068063"}


id: GO:1900138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phospholipase A2 activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phospholipase activity","termid":"GO:0010519"},{"relation_name":"is_a","term_name":"regulation of phospholipase A2 activity","termid":"GO:0032429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of phospholipase A2 activity","synonyms":[{"name":"down regulation of cytosolic phospholipase A2 activity","type":"narrow"},{"name":"down regulation of lecithinase A activity","type":"exact"},{"name":"down regulation of phosphatidase activity","type":"related"},{"name":"down regulation of phosphatidolipase activity","type":"exact"},{"name":"down regulation of phosphatidylcholine 2-acylhydrolase activity","type":"exact"},{"name":"down regulation of phospholipase A","type":"related"},{"name":"down regulation of phospholipase A2 activity","type":"exact"},{"name":"down regulation of secreted phospholipase A2 activity","type":"narrow"},{"name":"down-regulation of cytosolic phospholipase A2 activity","type":"narrow"},{"name":"down-regulation of lecithinase A activity","type":"exact"},{"name":"down-regulation of phosphatidase activity","type":"related"},{"name":"down-regulation of phosphatidolipase activity","type":"exact"},{"name":"down-regulation of phosphatidylcholine 2-acylhydrolase activity","type":"exact"},{"name":"down-regulation of phospholipase A","type":"related"},{"name":"down-regulation of phospholipase A2 activity","type":"exact"},{"name":"down-regulation of secreted phospholipase A2 activity","type":"narrow"},{"name":"downregulation of cytosolic phospholipase A2 activity","type":"narrow"},{"name":"downregulation of lecithinase A activity","type":"exact"},{"name":"downregulation of phosphatidase activity","type":"related"},{"name":"downregulation of phosphatidolipase activity","type":"exact"},{"name":"downregulation of phosphatidylcholine 2-acylhydrolase activity","type":"exact"},{"name":"downregulation of phospholipase A","type":"related"},{"name":"downregulation of phospholipase A2 activity","type":"exact"},{"name":"downregulation of secreted phospholipase A2 activity","type":"narrow"},{"name":"inhibition of cytosolic phospholipase A2 activity","type":"narrow"},{"name":"inhibition of lecithinase A activity","type":"narrow"},{"name":"inhibition of phosphatidase activity","type":"related"},{"name":"inhibition of phosphatidolipase activity","type":"narrow"},{"name":"inhibition of phosphatidylcholine 2-acylhydrolase activity","type":"narrow"},{"name":"inhibition of phospholipase A","type":"related"},{"name":"inhibition of phospholipase A2 activity","type":"narrow"},{"name":"inhibition of secreted phospholipase A2 activity","type":"narrow"},{"name":"negative regulation of cytosolic phospholipase A2 activity","type":"narrow"},{"name":"negative regulation of lecithinase A activity","type":"exact"},{"name":"negative regulation of phosphatidase activity","type":"related"},{"name":"negative regulation of phosphatidolipase activity","type":"exact"},{"name":"negative regulation of phosphatidylcholine 2-acylhydrolase activity","type":"exact"},{"name":"negative regulation of phospholipase A","type":"related"},{"name":"negative regulation of secreted phospholipase A2 activity","type":"narrow"}],"termid":"GO:1900138"}


id: MOD:02022
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-cervonoyl-L-lysine.","direct_ancestors":[{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"N-cervonoylated residue","termid":"MOD:02023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-cervonoyl-L-lysine","termid":"MOD:02022"}


id: MOD:00488
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:116#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized arginine biotinylated with biotin-LC-hydrazide","synonyms":[{"name":"OxArgBiotin","type":"related"},{"name":"Oxidized arginine biotinylated with biotin-LC-hydrazide","type":"related"}],"termid":"MOD:00488"}


id: GO:0071299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin A stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin A","termid":"GO:0033189"},{"relation_name":"is_a","term_name":"cellular response to vitamin","termid":"GO:0071295"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to vitamin A","synonyms":[{"name":"cellular response to retinol","type":"narrow"}],"termid":"GO:0071299"}


id: GO:0043408
data:
  {"annotated_genes":["SJAG_06622","SJAG_00027","SJAG_02392","SJAG_01885","SJAG_04825","SJAG_02183","SJAG_02878","SJAG_01114","SJAG_03263","SJAG_01587","SJAG_03903","SJAG_04522","SJAG_02135","SJAG_01978","SJAG_03185","SJAG_03893","SJAG_01199","SJAG_02486","SJAG_05000","SJAG_01787","SJAG_04666","SJAG_00975","SJAG_06621","SJAG_00610","SJAG_00781","SJAG_02013","SJAG_00845","SJAG_03453","SJAG_02233","SJAG_03828","SJAG_02000","SJAG_00424","SJAG_00318","SJAG_02945","SJAG_06592"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79190,88401],"is_not":false,"summary":null,"term":"GO:0043408"},{"annotations":[99869,114376,103095,103665,91911,95500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"},{"annotations":[103187,84277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043409"},{"annotations":[92034,91093,95502,87710,114377,113151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903753"},{"annotations":[103188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180040"},{"annotations":[85504,86828,98908,88465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903139"},{"annotations":[114343,104992,104995,104994,104996,104993,104997,108541,113443,104991,91317,107885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900745"},{"annotations":[84213,110687,111654,99770,86905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062038"},{"annotations":[91094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900744"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signal transduction mediated by the MAP kinase (MAPK) cascade.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"MAPK cascade","termid":"GO:0000165"}],"gene_count":35,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00318":null,"SJAG_00424":null,"SJAG_00610":null,"SJAG_00781":null,"SJAG_00845":null,"SJAG_00975":null,"SJAG_01114":null,"SJAG_01199":null,"SJAG_01587":null,"SJAG_01787":null,"SJAG_01885":null,"SJAG_01978":null,"SJAG_02000":null,"SJAG_02013":null,"SJAG_02135":null,"SJAG_02183":null,"SJAG_02233":null,"SJAG_02392":null,"SJAG_02486":null,"SJAG_02878":null,"SJAG_02945":null,"SJAG_03185":null,"SJAG_03263":null,"SJAG_03453":null,"SJAG_03828":null,"SJAG_03893":null,"SJAG_03903":null,"SJAG_04522":null,"SJAG_04666":null,"SJAG_04825":null,"SJAG_05000":null,"SJAG_06592":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of MAPK cascade","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of MAP kinase cascade","type":"exact"},{"name":"regulation of MAP kinase kinase kinase cascade","type":"exact"},{"name":"regulation of MAPKKK cascade","type":"exact"},{"name":"regulation of mitogen activated protein kinase cascade","type":"exact"},{"name":"regulation of mitogen activated protein kinase kinase kinase cascade","type":"exact"},{"name":"regulation of mitogen-activated protein kinase cascade","type":"exact"},{"name":"regulation of mitogen-activated protein kinase kinase kinase cascade","type":"exact"}],"termid":"GO:0043408","terms_by_termid":{"GO:0043408":null,"GO:0043409":null,"GO:0062038":null,"GO:0180040":null,"GO:1900744":null,"GO:1900745":null,"GO:1903138":null,"GO:1903139":null,"GO:1903753":null}}


id: PBO:0081363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF197 antisense RNA 1","termid":"PBO:0081363"}


id: PBO:0058958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"makorin ring finger protein 2","termid":"PBO:0058958"}


id: PBO:0054194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1569","termid":"PBO:0054194"}


id: PBO:0069876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1163, pseudogene","termid":"PBO:0069876"}


id: PBO:0082486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Carnitine acetyltransferase; has similarity to Yat1p, which is a carnitine acetyltransferase associated with the mitochondrial outer membrane","termid":"PBO:0082486"}


id: GO:0017007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent linkage of bilin and a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-tetrapyrrole linkage","termid":"GO:0017006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-bilin linkage","termid":"GO:0017007"}


id: GO:0030087
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete PSII associated light-harvesting complex II, core complex, LHCIIc subcomplex (obsolete GO:0030087)","synonyms":[{"name":"PSII associated light-harvesting complex II, core complex, LHCIIc subcomplex","type":"exact"}],"termid":"GO:0030087"}


id: SO:1001186
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1001186 sequence_variant_causing_cryptic_splice_acceptor_activation (obsolete SO:1001186)","synonyms":[{"name":"sequence variant causing cryptic splice acceptor activation","type":"exact"}],"termid":"SO:1001186"}


id: GO:0090661
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A box H/ACA ribonucleoprotein complex that contains the RNA component of vertebrate telomerase, the enzyme essential for the replication of chromosome termini in most eukaryotes. This ribonucleoprotein complex is a structural box H/ACA RNP, which does not have the catalytic pseudouridylation function shared by the majority of H/ACA RNPs present in the cell.","definition_xrefs":["GOC:BHF","GOC:jbu","PMID:22527283","GOC:BHF_telomere"],"direct_ancestors":[{"relation_name":"is_a","term_name":"box H/ACA RNP complex","termid":"GO:0072588"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"telomerase holoenzyme complex","termid":"GO:0005697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"box H/ACA telomerase RNP complex","termid":"GO:0090661"}


id: GO:0044494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant activation or increase in the activity of the activity of a voltage-gated sodium channel in the bitten organism.","definition_xrefs":["GOC:fj","GOC:jl","PMID:21781281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of voltage-gated sodium channel activity in another organism","termid":"GO:0044492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in positive regulation of voltage-gated sodium channel activity in another organism","synonyms":[{"name":"envenomation resulting in positive regulation of voltage-gated sodium channel activity in other organism","type":"exact"}],"termid":"GO:0044494"}


id: PBO:0041521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16 open reading frame 54","termid":"PBO:0041521"}


id: PBO:0050460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hook microtubule tethering protein 1","termid":"PBO:0050460"}


id: SO:0002091
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A UTR variant of intronic sequence of the 5' UTR.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5_prime_UTR_variant","termid":"SO:0001623"},{"relation_name":"is_a","term_name":"coding_transcript_intron_variant","termid":"SO:0001969"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_prime_UTR_intron_variant","synonyms":[{"name":"5 prime UTR intron variant","type":"exact"}],"termid":"SO:0002091"}


id: GO:0043165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of an outer membrane of the type formed in Gram-negative bacteria. This membrane is enriched in polysaccharide and protein, and the outer leaflet of the membrane contains specific lipopolysaccharide structures.","definition_xrefs":["GOC:jl","ISBN:0135712254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane assembly","termid":"GO:0071709"},{"relation_name":"part_of","term_name":"cell envelope organization","termid":"GO:0043163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"Gram-negative-bacterium-type cell outer membrane assembly","synonyms":[{"name":"cell outer membrane biogenesis","type":"related"}],"termid":"GO:0043165"}


id: PATO:0005003
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's resembling the form of a paddle.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paddle shaped","termid":"PATO:0005003"}


id: PBO:0087051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L24A; not essential for translation but may be required for normal translation rate; homologous to mammalian ribosomal protein L24, no bacterial homolog; RPL24A has a paralog, RPL24B, that arose from the whole genome duplication","termid":"PBO:0087051"}


id: PBO:0038543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABHD15 antisense RNA 1","termid":"PBO:0038543"}


id: GO:0051323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase, following prophase or prometaphase in higher eukaryotes, during which chromosomes become aligned on the equatorial plate of the cell.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle phase","termid":"GO:0098762"},{"relation_name":"part_of","term_name":"M phase","termid":"GO:0000279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metaphase","secondary_identifiers":["Wikipedia:Metaphase"],"termid":"GO:0051323"}


id: CHEBI:16976
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hygromycin B","termid":"CHEBI:16976"}


id: PBO:0027834
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_septum_edging_catabolic_process","termid":"PBO:0027834"}


id: PBO:0039325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachidonate 12-lipoxygenase pseudogene 2","termid":"PBO:0039325"}


id: GO:0004501
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AH(2) + Ecdysone + O2 = 20-hydroxyecdysone + A + H2O.","definition_xrefs":["RHEA:14021","EC:1.14.99.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"ecdysone 20-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R02374","MetaCyc:RXN-18799"],"synonyms":[{"name":"alpha-ecdysone C-20 hydroxylase activity","type":"related"},{"name":"ecdysone 20-hydroxylase activity","type":"exact"},{"name":"ecdysone modification","type":"broad"},{"name":"ecdysone,hydrogen-donor:oxygen oxidoreductase (20-hydroxylating)","type":"related"}],"termid":"GO:0004501"}


id: GO:0061724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The selective degradation of lipid droplets by macroautophagy.","definition_xrefs":["GOC:autophagy","PMID:23708524","PMID:26076903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006914"],"is_obsolete":false,"name":"lipophagy","termid":"GO:0061724"}


id: PBO:0083209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified ORF RPC19/YNL113W, an RNA polymerase subunit","termid":"PBO:0083209"}


id: GO:0047901
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: formyl-CoA + H2O = CoA + formate + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete formyl-CoA hydrolase activity (obsolete GO:0047901)","synonyms":[{"name":"formyl coenzyme A hydrolase activity","type":"related"}],"termid":"GO:0047901"}


id: PR:O42851
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23A1.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized trans-sulfuration enzyme C23A1.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23A1.14c","synonyms":[{"name":"Spom972h-SPAC23A1.14c","type":"exact"}],"termid":"PR:O42851"}


id: GO:0004816
data:
  {"annotated_genes":["SJAG_04856","SJAG_02517"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98332,101118],"is_not":false,"summary":null,"term":"GO:0004816"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-asparagine + ATP + tRNA(Asn) = AMP + Asn-tRNA(Asn) + diphosphate + 2 H+.","definition_xrefs":["EC:6.1.1.22","RHEA:11180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02517":null,"SJAG_04856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140101","GO:0140098","GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"asparagine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R03648","MetaCyc:ASPARAGINE--TRNA-LIGASE-RXN","Reactome:R-HSA-380227","Reactome:R-HSA-379996"],"synonyms":[{"name":"L-asparagine:tRNAAsn ligase (AMP-forming)","type":"related"},{"name":"asparagine translase activity","type":"related"},{"name":"asparaginyl transfer RNA synthetase activity","type":"related"},{"name":"asparaginyl transfer ribonucleic acid synthetase activity","type":"related"},{"name":"asparaginyl-tRNA synthetase activity","type":"exact"},{"name":"asparaginyl-transfer ribonucleate synthetase activity","type":"related"},{"name":"asparagyl-transfer RNA synthetase activity","type":"related"}],"termid":"GO:0004816","terms_by_termid":{"GO:0004816":null}}


id: PBO:0071158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 23","termid":"PBO:0071158"}


id: PBO:0084871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; has similarity to mammalian apoptosis mediator proteins; null mutation prevents induction of apoptosis by overproduction of metacaspase Mca1p","termid":"PBO:0084871"}


id: GO:0043817
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R)-O-phospho-3-sulfolactate = phosphoenolpyruvate + sulfite.","definition_xrefs":["EC:4.4.1.19","RHEA:22784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phosphosulfolactate synthase activity","secondary_identifiers":["MetaCyc:4.4.1.19-RXN","KEGG_REACTION:R07476"],"synonyms":[{"name":"(2R)-O-phospho-3-sulfolactate sulfo-lyase (phosphoenolpyruvate-forming)","type":"related"},{"name":"(2R)-O-phospho-3-sulfolactate sulfo-lyase activity","type":"exact"},{"name":"(2R)-phospho-3-sulfolactate synthase activity","type":"related"},{"name":"PSL synthase activity","type":"related"}],"termid":"GO:0043817"}


id: PBO:0045092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal-less homeobox 3","termid":"PBO:0045092"}


id: PBO:0039549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD44 divergent transcript","termid":"PBO:0039549"}


id: FYPO:0004048
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione peroxidase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"},{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0005447"],"is_obsolete":false,"name":"abnormal glutathione peroxidase activity","termid":"FYPO:0004048"}


id: GO:0097001
data:
  {"annotated_genes":["SJAG_03690"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113588],"is_not":false,"summary":null,"term":"GO:0097001"}]},"cv_name":"molecular_function","definition":"Binding to a ceramide, a class of lipids composed of sphingosine linked to a fatty acid. Ceramides are a major component of cell membranes.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"sphingolipid binding","termid":"GO:0046625"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03690":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"ceramide binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097001","terms_by_termid":{"GO:0097001":null}}


id: PBO:0046011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 1 pseudogene 6","termid":"PBO:0046011"}


id: PBO:0031746
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-flocculation_abolished_(obsolete_FYPO:0000461)","termid":"PBO:0031746"}


id: PBO:0079257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTC28 antisense RNA 1","termid":"PBO:0079257"}


id: PR:000027621
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription factor zip1 ubiquitinated form in Schizosaccharomyces pombe. Ubiquitinated by SCF(Pof1). Example: UniProtKB:Q10424-1, MOD:01148.","definition_xrefs":["PMID:15660136","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor zip1","termid":"PR:000027614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor zip1 ubiquitinated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC25G10.03","synonyms":[{"name":"Spom-zip1/UbiqLys+","type":"exact"}],"termid":"PR:000027621"}


id: PBO:0005133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HD domain metal dependent phosphohydrolase (predicted)","termid":"PBO:0005133"}


id: GO:0150128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of interleukin-33 production.","definition_xrefs":["GOC:aruk","PMID:29778524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-33 production","termid":"GO:0150127"},{"relation_name":"negatively_regulates","term_name":"interleukin-33 production","termid":"GO:0072639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-33 production","secondary_identifiers":["GO:0150131","GO:0150124"],"synonyms":[{"name":"negative regulation of interleukin-33 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-33 secretion","type":"narrow"}],"termid":"GO:0150128"}


id: MOD:00326
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to L-pyrrolysine (not known as a natural, post-translational modification process).","definition_xrefs":["PubMed:15314242","RESID:AA0321#LYS","PubMed:16096277","Unimod:435#K","PubMed:12029131","PubMed:12029132","PubMed:11435424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"L-pyrrolysine residue","termid":"MOD:01187"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-pyrrolysine (Lys)","synonyms":[{"name":"(2S)-2-amino-6-[(2R,3R)-3-methyl-3,4-dihydro-2H-pyrrol-2-ylcarbonyl]aminohexanoic acid","type":"exact"},{"name":"2-azanyl-6-[(2R,3R)-3-methyl-3,4-dihydro-2H-pyrrol-2-ylcarbonyl]azanylhexanoic acid","type":"exact"},{"name":"L-pyrrolysine","type":"exact"},{"name":"N6-(4-methyl-1,2-didehydropyrrolidine-5-carboxyl)-L-lysine","type":"exact"},{"name":"N6-(4-methyl-delta-1-pyrroline-5-carboxyl)-L-lysine","type":"exact"},{"name":"N6-([(2R,3R)-3-methyl-3,4-dihydro-2H-pyrrol-2-yl]carbonyl)-L-lysine","type":"exact"},{"name":"NON_STD Pyrrolysine","type":"exact"},{"name":"Pyl(Lys)","type":"exact"},{"name":"monomethylamine methyltransferase cofactor lysine adduct","type":"exact"}],"termid":"MOD:00326"}


id: GO:0050534
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-deoxyoctulosonyl-lipopolysaccharide + H2O = 3-deoxyoctulosonic acid + lipopolysaccharide.","definition_xrefs":["EC:3.2.1.144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"3-deoxyoctulosonase activity","secondary_identifiers":["MetaCyc:RXN-12002"],"synonyms":[{"name":"3-deoxyoctulosonyl-lipopolysaccharide hydrolase activity","type":"related"},{"name":"alpha-Kdo-ase activity","type":"related"}],"termid":"GO:0050534"}


id: PBO:0057248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 450a-2","termid":"PBO:0057248"}


id: RO:0002373
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"m has_muscle_insertion s iff m is attaches_to s, and it is the case that when m contracts, s moves. Insertions are usually connections of muscle via tendon to bone.","direct_ancestors":[{"relation_name":"is_a","term_name":"attached_to","termid":"RO:0002371"},{"relation_name":"is_a","term_name":"biomechanically_related_to","termid":"RO:0002567"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_muscle_insertion","termid":"RO:0002373"}


id: GO:0031457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycine betaine, N-trimethylglycine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine catabolic process","termid":"GO:0006579"},{"relation_name":"is_a","term_name":"glycine betaine metabolic process","termid":"GO:0031455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycine betaine catabolic process","synonyms":[{"name":"N-trimethylglycine catabolic process","type":"exact"},{"name":"N-trimethylglycine catabolism","type":"exact"},{"name":"glycine betaine breakdown","type":"exact"},{"name":"glycine betaine catabolism","type":"exact"},{"name":"glycine betaine degradation","type":"exact"}],"termid":"GO:0031457"}


id: PBO:0091027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPS complex Rab GEF subunit Vam6","termid":"PBO:0091027"}


id: PBO:0052075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin regulatory subunit B1 like 1","termid":"PBO:0052075"}


id: FYPO:0006601
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to centromeric chromatin is normal (i.e. indistinguishable from wild type during metaphase of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to centromeric chromatin","termid":"FYPO:0005072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0000138","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to centromeric chromatin during mitotic metaphase","synonyms":[{"name":"normal protein localisation to centromeric chromatin during mitotic metaphase during vegetative growth","type":"exact"},{"name":"normal protein localization to centromeric chromatin during metaphase during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at centromere during mitotic metaphase","type":"exact"}],"termid":"FYPO:0006601"}


id: GO:0050849
data:
  {"annotated_genes":["SJAG_02858","SJAG_03799"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97052,112200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106057"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of calcium-mediated signaling.","definition_xrefs":["GOC:ai","PMID:11696592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium-mediated signaling","termid":"GO:0050848"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"calcium-mediated signaling","termid":"GO:0019722"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02858":null,"SJAG_03799":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of calcium-mediated signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of calcium-mediated signaling","type":"exact"},{"name":"down-regulation of calcium-mediated signaling","type":"exact"},{"name":"downregulation of calcium-mediated signaling","type":"exact"},{"name":"inhibition of calcium-mediated signaling","type":"narrow"},{"name":"negative regulation of calcium-mediated signalling","type":"exact"}],"termid":"GO:0050849","terms_by_termid":{"GO:0106057":null}}


id: PBO:0080784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related, Y-linked pseudogene 4","termid":"PBO:0080784"}


id: GO:1903270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cytoplasmic translational elongation through polyproline stretches.","definition_xrefs":["GO_REF:0000058","PMID:24923804","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic translational elongation","termid":"GO:1900247"},{"relation_name":"regulates","term_name":"cytoplasmic translational elongation through polyproline stretches","termid":"GO:0097622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of cytoplasmic translational elongation through polyproline stretches","termid":"GO:1903270"}


id: GO:0050531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-(alpha-D-mannosyl)-3-phosphoglycerate + H2O = 2-(alpha-D-mannosyl)-D-glycerate + phosphate.","definition_xrefs":["RHEA:19309","EC:3.1.3.70"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"mannosyl-3-phosphoglycerate phosphatase activity","secondary_identifiers":["MetaCyc:3.1.3.70-RXN","KEGG_REACTION:R05790"],"synonyms":[{"name":"alpha-D-mannosyl-3-phosphoglycerate phosphohydrolase activity","type":"related"}],"termid":"GO:0050531"}


id: PBO:0080787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related, Y-linked pseudogene 7","termid":"PBO:0080787"}


id: PBO:0077990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transformer 2 beta homolog","termid":"PBO:0077990"}


id: GO:0047263
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ceramide + UDP-galactose = D-galactosylceramide + UDP.","definition_xrefs":["GOC:curator"],"gene_count":0,"genotype_count":0,"name":"obsolete N-acylsphingosine galactosyltransferase activity (obsolete GO:0047263)","termid":"GO:0047263"}


id: PBO:0051302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-42 (non-functional)","termid":"PBO:0051302"}


id: PR:O74777
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A KRR1 small subunit processome component that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12581:SF0","OMA:SCHPO03344","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRR1 small subunit processome component homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25B2.05","secondary_identifiers":["UniProtKB:O74777"],"synonyms":[{"name":"KRR-R motif-containing protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-KRR1","type":"exact"},{"name":"ribosomal RNA assembly protein mis3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74777"}


id: GO:0090106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of a cell to a pancreatic E cell fate and its capacity to differentiate into a pancreatic E cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"pancreatic epsilon cell differentiation","termid":"GO:0090104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreatic E cell fate commitment","termid":"GO:0090106"}


id: GO:2001111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lens epithelial cell proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation","termid":"GO:0050679"},{"relation_name":"is_a","term_name":"regulation of lens epithelial cell proliferation","termid":"GO:2001109"},{"relation_name":"positively_regulates","term_name":"lens epithelial cell proliferation","termid":"GO:0097166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lens epithelial cell proliferation","termid":"GO:2001111"}


id: GO:0051973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of telomerase activity, the catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of telomerase activity (obsolete GO:0051973)","synonyms":[{"name":"activation of telomerase activity","type":"narrow"},{"name":"stimulation of telomerase activity","type":"narrow"},{"name":"telomerase activator","type":"related"},{"name":"up regulation of telomerase activity","type":"exact"},{"name":"up-regulation of telomerase activity","type":"exact"},{"name":"upregulation of telomerase activity","type":"exact"}],"termid":"GO:0051973"}


id: FYPO:0005714
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleolus begins earlier than normal.","definition_xrefs":["PMID:17538026","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleolus","termid":"FYPO:0003687"},{"relation_name":"is_a","term_name":"premature protein localization to nucleus during vegetative growth","termid":"FYPO:0005667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"premature protein localization to nucleolus","synonyms":[{"name":"advanced protein localization to nucleolus","type":"exact"},{"name":"precocious protein localization to nucleolus","type":"related"},{"name":"premature protein localisation to nucleolus","type":"exact"},{"name":"premature protein localization to nucleolus during mitotic cell cycle","type":"related"},{"name":"premature protein localization to nucleolus during vegetative growth","type":"exact"}],"termid":"FYPO:0005714"}


id: GO:0072763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hesperadin stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to amine stimulus","termid":"GO:0071418"},{"relation_name":"is_a","term_name":"response to hesperadin","termid":"GO:1901595"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to hesperadin","termid":"GO:0072763"}


id: GO:0033984
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate = indole + D-glyceraldehyde 3-phosphate.","definition_xrefs":["EC:4.1.2.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"indole-3-glycerol-phosphate lyase activity","secondary_identifiers":["MetaCyc:RXN0-2381","RHEA:14081","KEGG_REACTION:R02340"],"synonyms":[{"name":"(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate D-glyceraldehyde-3-phosphate-lyase (indole-forming) activity","type":"related"},{"name":"(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate D-glyceraldehyde-3-phosphate-lyase activity","type":"related"},{"name":"BX1","type":"related"},{"name":"IGL","type":"related"},{"name":"TSA","type":"related"},{"name":"indole glycerol phosphate hydrolase activity","type":"related"},{"name":"indole synthase activity","type":"related"},{"name":"indole-3-glycerol phosphate lyase activity","type":"related"},{"name":"indole-3-glycerolphosphate D-glyceraldehyde-3-phosphate-lyase activity","type":"related"},{"name":"indoleglycerolphosphate aldolase activity","type":"related"},{"name":"tryptophan synthase alpha activity","type":"narrow"},{"name":"tryptophan synthase alpha subunit activity","type":"narrow"}],"termid":"GO:0033984"}


id: GO:0044142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the symbiont's increase in size or mass on or near the cells or tissues of the host organism.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of growth of symbiont on or near host surface (obsolete GO:0044142)","termid":"GO:0044142"}


id: PBO:0091554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-alpha-hydroxytetrahydrobiopterin dehydratase","termid":"PBO:0091554"}


id: GO:0100040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates invasive growth in response to glucose limitation.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of invasive growth in response to glucose limitation by transcription from RNA polymerase II promoter (obsolete GO:0100040)","termid":"GO:0100040"}


id: PBO:0059136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPHOSPH10 pseudogene 3","termid":"PBO:0059136"}


id: PBO:0036279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, human CCDC82 ortholog","termid":"PBO:0036279"}


id: PBO:0088955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease catalytic subunit Sen34","termid":"PBO:0088955"}


id: GO:1904917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-arginine across a membrane from lysosomal lumen to cytosol.","definition_xrefs":["GO_REF:0000078","PMID:22822152","GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal transport","termid":"GO:0007041"},{"relation_name":"is_a","term_name":"L-arginine transmembrane export from vacuole","termid":"GO:1990818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"L-arginine transmembrane transport from lysosomal lumen to cytosol","synonyms":[{"name":"transmembrane L-arginine transport from lysosomal lumen to cytosol","type":"exact"}],"termid":"GO:1904917"}


id: PBO:0072203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 2","termid":"PBO:0072203"}


id: GO:0035302
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydroxylation of an ecdysteroid at carbon position 25. Ecdysteroids are a group of polyhydroxylated ketosteroids which initiate post-embryonic development, particularly metamorphosis, in insects and other arthropods.","definition_xrefs":["PMID:15350618","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"ecdysteroid 25-hydroxylase activity","termid":"GO:0035302"}


id: PBO:0050625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSDL2 antisense RNA 1","termid":"PBO:0050625"}


id: PBO:0030188
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cut_during_cellular_response_to_hydroxyurea","termid":"PBO:0030188"}


id: PBO:0028369
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_microsatellite_DNA_binding","termid":"PBO:0028369"}


id: PBO:0031313
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_septation","termid":"PBO:0031313"}


id: PBO:0068184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 491","termid":"PBO:0068184"}


id: GO:0016039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reception of a (UV light) photon by a cell, UV light being defined as having a wavelength within the range 13.6-400 nm.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"light absorption","termid":"GO:0016037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"absorption of UV light","termid":"GO:0016039"}


id: PBO:0038546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 17A, depalmitoylase","termid":"PBO:0038546"}


id: PBO:0050371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 74","termid":"PBO:0050371"}


id: PBO:0050879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IDI1 pseudogene 2","termid":"PBO:0050879"}


id: GO:0061768
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Na+(in) + Mg2+(out) = Na+(out) + Mg2+(in).","definition_xrefs":["GOC:pad","GOC:PARL","PMID:22031603"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"magnesium ion transmembrane transporter activity","termid":"GO:0015095"},{"relation_name":"is_a","term_name":"metal cation:monoatomic cation antiporter activity","termid":"GO:0140828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"magnesium:sodium antiporter activity","termid":"GO:0061768"}


id: GO:0033471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving GDP-L-galactose, a substance composed of L-galactose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"},{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"GDP-L-galactose metabolic process","synonyms":[{"name":"GDP-L-galactose metabolism","type":"exact"}],"termid":"GO:0033471"}


id: GO:0008266
data:
  {"annotated_genes":["SJAG_01327","SJAG_03214","SJAG_02469","SJAG_00145","SJAG_01650","SJAG_03283","SJAG_04880","SJAG_03460","SJAG_01222","SJAG_03876","SJAG_05240","SJAG_04271","SJAG_03954","SJAG_04427"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72114,73609,85555,91222,91690,91891,93181,94578,102393,103779,105986,108950,111003,112485],"is_not":false,"summary":null,"term":"GO:0008266"}]},"cv_name":"molecular_function","definition":"Binding to a sequence of uracil residues in an RNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poly-pyrimidine tract binding","termid":"GO:0008187"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_01222":null,"SJAG_01327":null,"SJAG_01650":null,"SJAG_02469":null,"SJAG_03214":null,"SJAG_03283":null,"SJAG_03460":null,"SJAG_03876":null,"SJAG_03954":null,"SJAG_04271":null,"SJAG_04427":null,"SJAG_04880":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"poly(U) RNA binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"poly(U) binding","type":"exact"}],"termid":"GO:0008266","terms_by_termid":{"GO:0008266":null}}


id: GO:0035122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the embryo, by which the anatomical structures of the medial fin are generated and organized. Medial fins are unpaired fins of fish, usually located dorsomedially or ventromedially and primarily used for stability while swimming.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic appendage morphogenesis","termid":"GO:0035113"},{"relation_name":"is_a","term_name":"medial fin morphogenesis","termid":"GO:0035141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic medial fin morphogenesis","synonyms":[{"name":"embryonic unpaired fin morphogenesis","type":"exact"}],"termid":"GO:0035122"}


id: PBO:0066128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras association domain family member 7","termid":"PBO:0066128"}


id: GO:0046436
data:
  {"annotated_genes":["SJAG_02496"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110809],"is_not":false,"summary":null,"term":"GO:0046436"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-alanine, the D-enantiomer of the amino acid alanine, i.e. (2R)-2-aminopropanoic acid.","definition_xrefs":["GOC:ai","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanine metabolic process","termid":"GO:0006522"},{"relation_name":"is_a","term_name":"D-amino acid metabolic process","termid":"GO:0046416"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02496":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"D-alanine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"D-alanine metabolism","type":"exact"}],"termid":"GO:0046436","terms_by_termid":{"GO:0046436":null}}


