# terms

id: GO:0046978
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the TAP1 subunit of TAP (transporter associated with antigen processing) protein.","definition_xrefs":["PMID:11133832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TAP binding","termid":"GO:0046977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"TAP1 binding","termid":"GO:0046978"}


id: GO:0075077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism stops, prevents, or reduces the frequency, rate or extent of the symbiont adenylate cyclase activity, which catalyze the reaction: ATP = 3',5'-cyclic AMP + diphosphate. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont adenylate cyclase activity (obsolete GO:0075077)","termid":"GO:0075077"}


id: PBO:0069286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 542, pseudogene","termid":"PBO:0069286"}


id: PBO:0087384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sterol regulatory element binding protein; induces sterol biosynthetic genes, upon sterol depletion; acts as a sterol sensor, binding ergosterol in sterol rich conditions; relocates from intracellular membranes to perinuclear foci upon sterol depletion; redundant activator of filamentation with ECM22, up-regulating the expression of filamentous growth genes; contains a Zn[2]-Cys[6] binuclear cluster; UPC2 has a paralog, ECM22, that arose from the whole genome duplication","termid":"PBO:0087384"}


id: GO:1990472
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to dual-strand piRNA clusters, double-stranded DNA regions that give rise to PIWI-interacting RNAs (piRNAs) where piRNAs originate from both DNA strands via noncanonical transcription.","definition_xrefs":["GOC:bhm","PMID:24906153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"piRNA cluster binding","termid":"GO:1990470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"piRNA dual-strand cluster binding","termid":"GO:1990472"}


id: PBO:0074241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 52 member 1","termid":"PBO:0074241"}


id: PBO:0036528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation regulator Bye1 (predicted)","termid":"PBO:0036528"}


id: GO:0035225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Allocation of embryonic cells to the genital imaginal disc founder populations. Early in development at the blastoderm stage, the anlage of the genital disc of both sexes consists of three primordia: the female genital primoridum lcoated anteriorly, the anal primoridum located posteriorly, and the male gential primordium between the two.","definition_xrefs":["PMID:11494318","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of imaginal disc primordium","termid":"GO:0007445"},{"relation_name":"part_of","term_name":"genital disc development","termid":"GO:0035215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of genital disc primordium","termid":"GO:0035225"}


id: PBO:0028999
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_from_SRE_promoter","termid":"PBO:0028999"}


id: PBO:0113749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDHC pseudogene 5","termid":"PBO:0113749"}


id: GO:0097699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any response to fluid shear stress in a vascular endothelial cell.","definition_xrefs":["GOC:BHF","GOC:bc","PMID:21768538","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to fluid shear stress","termid":"GO:0071498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular endothelial cell response to fluid shear stress","synonyms":[{"name":"blood vessel endothelial cell response to fluid shear stress","type":"exact"}],"termid":"GO:0097699"}


id: PBO:0080809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-ray repair cross complementing 5","termid":"PBO:0080809"}


id: GO:0006495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators","GOC:jsg"],"gene_count":0,"genotype_count":0,"name":"obsolete terminal O-glycosylation (obsolete GO:0006495)","synonyms":[{"name":"terminal O-glycosylation","type":"exact"}],"termid":"GO:0006495"}


id: PATO:0002416
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Flattened from above downward; below the normal level or the level of the surrounding parts.","definition_xrefs":["PATOC:MPATH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elevation","termid":"PATO:0001687"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sunken","termid":"PATO:0002416"}


id: PBO:0039847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 15","termid":"PBO:0039847"}


id: PBO:0073876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 10 member 4","termid":"PBO:0073876"}


id: PATO:0001632
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the front of an organism relative to another entity.","definition_xrefs":["PATOC:nw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterior to","synonyms":[{"name":"preceding","type":"exact"},{"name":"ventral_to","type":"exact"}],"termid":"PATO:0001632"}


id: FYPO:0002943
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is shaped in the form of a spheroid, and has a larger volume than normal, when the cell undergoes transition from G0 phase to G1. In spheroid cells, there is much less difference between the long and short axes of the cell than in wild type. Spheroid cells may shorter than normal, with approximately the same diameter as normal, or they may be enlarged.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swollen spheroid cell","termid":"FYPO:0002941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"swollen spheroid cell during G0 to G1 transition","synonyms":[{"name":"enlarged spheroid cell during G0 to G1 transition","type":"related"},{"name":"enlarged volume spheroid cell during G0 to G1 transition","type":"exact"},{"name":"large spheroid cell during G0 to G1 transition","type":"related"},{"name":"spheroid cell with increased cell size during G0 to G1 transition","type":"related"},{"name":"spheroid cell with increased cell volume during G0 to G1 transition","type":"exact"},{"name":"swollen rounded cell during G0 to G1 transition","type":"exact"},{"name":"swollen spheroid cell during cell cycle re-entry","type":"exact"},{"name":"swollen spheroid cell during cell quiescence to G1 transition","type":"exact"},{"name":"swollen spheroid cell during exit from cell quiescence","type":"exact"},{"name":"swollen spheroid cell during quiescence to G1 transition","type":"exact"},{"name":"swollen spheroid cell during recovery from quiescence","type":"exact"}],"termid":"FYPO:0002943"}


id: PBO:0069823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1109, pseudogene","termid":"PBO:0069823"}


id: GO:0034683
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alphav subunit and one beta3 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"integrin alphav-beta3 complex","synonyms":[{"name":"ITGAV-ITGB3 complex","type":"narrow"},{"name":"alphav-beta3 integrin complex","type":"exact"}],"termid":"GO:0034683"}


id: GO:0120339
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The short portion of the radial spoke that is directly anchored to the A microtubule of an axonemal microtubule doublet.","definition_xrefs":["GOC:krc","PMID:22754630","PMID:25694453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"radial spoke","termid":"GO:0001534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"radial spoke base","termid":"GO:0120339"}


id: PR:O74984
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC338.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein homolog C338.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.06c","synonyms":[{"name":"Spom972h-SPCC338.06c","type":"exact"}],"termid":"PR:O74984"}


id: PBO:0028138
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cytosolic_large_ribosomal_subunit_level","termid":"PBO:0028138"}


id: PATO:0000985
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A porosity quality inhering in a bearer by virtue of the bearer's being incapable of admitting the passage of gas or liquid through pores or interstices.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porosity","termid":"PATO:0000973"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-porous","termid":"PATO:0000985"}


id: PBO:0043696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 5B pseudogene 2","termid":"PBO:0043696"}


id: PR:P87014
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein-S-isoprenylcysteine O-methyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12714:SF0","PRO:DNx","OMA:SCHPO00496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-S-isoprenylcysteine O-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.12c","secondary_identifiers":["UniProtKB:P87014"],"synonyms":[{"name":"PPMT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ICMT","type":"exact"},{"name":"isoprenylcysteine carboxylmethyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pcCMT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"prenylated protein carboxyl methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"prenylcysteine carboxyl methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87014"}


id: GO:0043663
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A symbiosome containing any of various structurally modified bacteria, such as those occurring on the root nodules of leguminous plants, of a host cell.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host symbiosome","termid":"GO:0043658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host bacteroid-containing symbiosome","termid":"GO:0043663"}


id: PBO:0054081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1431","termid":"PBO:0054081"}


id: PBO:0054719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2128","termid":"PBO:0054719"}


id: GO:0097669
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is Skp2 in S. cerevisiae.","definition_xrefs":["GOC:vw","PMID:14747994","GOC:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SCF-Skp2 ubiquitin ligase complex","termid":"GO:0097669"}


id: PR:Q10196
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC11C11.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C11C11.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11C11.05","synonyms":[{"name":"Spom972h-SPBC11C11.05","type":"exact"}],"termid":"PR:Q10196"}


id: GO:0075164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont G-protein beta subunit-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of G-protein beta subunit-mediated signal transduction in response to host (obsolete GO:0075164)","synonyms":[{"name":"negative regulation of symbiont G-protein beta subunit-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075164"}


id: GO:0003167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a cell of the atrioventricular bundle. These cells are specialized cardiomyocytes that transmit signals from the AV node to the cardiac Purkinje fibers.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"His-Purkinje system cell differentiation","termid":"GO:0060932"},{"relation_name":"part_of","term_name":"bundle of His development","termid":"GO:0003166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrioventricular bundle cell differentiation","synonyms":[{"name":"AV bundle cell differentiation","type":"exact"}],"termid":"GO:0003167"}


id: PBO:0050111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 21","termid":"PBO:0050111"}


id: PBO:0076078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stereocilin pseudogene 1","termid":"PBO:0076078"}


id: PBO:0034405
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_process_that_occurs_in","termid":"PBO:0034405"}


id: PBO:0059223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maestro heat like repeat family member 5 (gene/pseudogene)","termid":"PBO:0059223"}


id: PBO:0017620
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Progressive Myoclonus Epilepsy","termid":"PBO:0017620"}


id: PBO:0049184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grainyhead like transcription factor 1","termid":"PBO:0049184"}


id: GO:0015850
data:
  {"annotated_genes":["SJAG_00671","SJAG_03808","SJAG_02962","SJAG_02152","SJAG_02323","SJAG_02375","SJAG_03718","SJAG_03595","SJAG_04506","SJAG_00261","SJAG_01722","SJAG_00355","SJAG_01329","SJAG_01407","SJAG_01590","SJAG_03652"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120011"},{"annotations":[102374,97722,97533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032366"},{"annotations":[84481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990556"},{"annotations":[94108,88619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904679"},{"annotations":[86200,113543,86201,114810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903090"},{"annotations":[86202,113544,86203,114811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903091"},{"annotations":[86205,113545,86204,114812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903092"},{"annotations":[104260,98673,105413,107389,90307,112295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015918"}]},"cv_name":"biological_process","definition":"The directed movement of an organic hydroxy compound (organic alcohol) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. An organic hydroxy compound is an organic compound having at least one hydroxy group attached to a carbon atom.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00261":null,"SJAG_00355":null,"SJAG_00671":null,"SJAG_01329":null,"SJAG_01407":null,"SJAG_01590":null,"SJAG_01722":null,"SJAG_02152":null,"SJAG_02323":null,"SJAG_02375":null,"SJAG_02962":null,"SJAG_03595":null,"SJAG_03652":null,"SJAG_03718":null,"SJAG_03808":null,"SJAG_04506":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"organic hydroxy compound transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"organic alcohol transport","type":"exact"}],"termid":"GO:0015850","terms_by_termid":{"GO:0015918":null,"GO:0032366":null,"GO:0120011":null,"GO:1903090":null,"GO:1903091":null,"GO:1903092":null,"GO:1904679":null,"GO:1990556":null}}


id: GO:0005645
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete RAN-binding protein (obsolete GO:0005645)","synonyms":[{"name":"RAN-binding protein","type":"exact"}],"termid":"GO:0005645"}


id: PBO:0073028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secernin 1","termid":"PBO:0073028"}


id: FYPO:0007100
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the first meiotic nuclear division is arrested in prophase I under conditions where arrest does not normally occur, and with telomeres clustered at the spindle pole body. Telomere clustering at the SPB indicates that the cell has reached or passed the pachytene stage.","definition_xrefs":["PMID:21449049","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormally arrested meiosis I","termid":"FYPO:0002817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abnormal cell cycle arrest in meiotic prophase I with clustered telomeres","synonyms":[{"name":"abnormal cell cycle arrest in meiotic prophase I at or after pachytene","type":"exact"},{"name":"abnormal cell cycle arrest in meiotic prophase I with telomeres clustered at SPB","type":"exact"},{"name":"abnormal cell cycle arrest in meiotic prophase I with telomeres clustered at spindle pole bodies","type":"exact"}],"termid":"FYPO:0007100"}


id: PBO:0042844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 52","termid":"PBO:0042844"}


id: PBO:0042123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 196","termid":"PBO:0042123"}


id: PBO:0042789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 164","termid":"PBO:0042789"}


id: GO:0018061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a N-terminal peptidyl-phenylalanine residue by either oxidative deamination or by transamination and subsequent reduction to form peptidyl-L-3-phenyllactic acid.","definition_xrefs":["RESID:AA0128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-phenylalanine modification","termid":"GO:0018207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-L-3-phenyllactic acid biosynthetic process from peptidyl-phenylalanine","synonyms":[{"name":"peptidyl-L-3-phenyllactic acid anabolism from peptidyl-phenylalanine","type":"exact"},{"name":"peptidyl-L-3-phenyllactic acid formation from peptidyl-phenylalanine","type":"exact"},{"name":"peptidyl-L-3-phenyllactic acid synthesis from peptidyl-phenylalanine","type":"exact"}],"termid":"GO:0018061"}


id: MOD:01221
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-formyl-L-threonine.","definition_xrefs":["PubMed:11861642","PubMed:15799070","Unimod:122#T"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-formylated residue","termid":"MOD:01483"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"O-formyl-L-threonine","synonyms":[{"name":"Formyl","type":"related"},{"name":"Formylation","type":"related"}],"termid":"MOD:01221"}


id: PBO:0055186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2610","termid":"PBO:0055186"}


id: PBO:0030093
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_vegetative_cell_population_growth","termid":"PBO:0030093"}


id: PBO:0070042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1339, pseudogene","termid":"PBO:0070042"}


id: PBO:0047329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fas binding factor 1","termid":"PBO:0047329"}


id: PBO:0061268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOVA1 divergent transcript","termid":"PBO:0061268"}


id: PBO:0017691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome small subunit biogenesis protein Sgd1 (predicted)","termid":"PBO:0017691"}


id: PBO:0038919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor G1","termid":"PBO:0038919"}


id: PBO:0051845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iroquois homeobox 1 pseudogene 1","termid":"PBO:0051845"}


id: RO:0002253
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of connecting branch of","direct_ancestors":[{"relation_name":"is_a","term_name":"in_branching_relationship_with","termid":"RO:0002375"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_connecting_branch","termid":"RO:0002253"}


id: PBO:0063961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4-phosphate 5-kinase type 1 pseudogene 2","termid":"PBO:0063961"}


id: PBO:0029706
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_mononucleate_vegetative_cell_with_mislocalized_septum","termid":"PBO:0029706"}


id: PBO:0077668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 13C","termid":"PBO:0077668"}


id: PBO:0011468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, thioredoxin family","termid":"PBO:0011468"}


id: PBO:0075757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRR1 domain containing","termid":"PBO:0075757"}


id: PBO:0051399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda joining 7","termid":"PBO:0051399"}


id: PBO:0030720
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_polysaccharide_level","termid":"PBO:0030720"}


id: PBO:0047862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(2)(q13)","termid":"PBO:0047862"}


id: PBO:0080066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 32 pseudogene 3","termid":"PBO:0080066"}


id: PBO:0063548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasmanylethanolamine desaturase 1","termid":"PBO:0063548"}


id: GO:0070151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling histidine to histidyl-tRNA in a mitochondrion, catalyzed by histidyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histidyl-tRNA aminoacylation","termid":"GO:0006427"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0140053","GO:0006399","GO:0006520"],"is_obsolete":false,"name":"mitochondrial histidyl-tRNA aminoacylation","termid":"GO:0070151"}


id: PBO:0066680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RLIG1 pseudogene 2","termid":"PBO:0066680"}


id: FYPO:0008190
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to chromatin at the centromere central core is increased during the meiotic prophase I.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to chromatin at centromere central core during meiotic prophase I","termid":"FYPO:0008190"}


id: PBO:0005582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase","termid":"PBO:0005582"}


id: FYPO:0002604
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a greater extent than normal at ribosomal DNA. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002494","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H2A phosphorylation at rDNA during vegetative growth","synonyms":[{"name":"increased histone H2A phosphorylation at rDNA during mitotic cell cycle","type":"related"},{"name":"increased histone H2A phosphorylation at ribosomal DNA during vegetative growth","type":"exact"}],"termid":"FYPO:0002604"}


id: GO:0051865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The ubiquitination by a protein of one or more of its own amino acid residues, or residues on an identical protein. Ubiquitination occurs on the lysine residue by formation of an isopeptide crosslink.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein ubiquitination","termid":"GO:0016567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein autoubiquitination","synonyms":[{"name":"protein auto-ubiquitination","type":"exact"},{"name":"protein auto-ubiquitinylation","type":"exact"},{"name":"protein autoubiquitinylation","type":"exact"},{"name":"protein self-ubiquitination","type":"exact"},{"name":"protein self-ubiquitinylation","type":"exact"}],"termid":"GO:0051865"}


id: PBO:0051309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR2-1 (pseudogene)","termid":"PBO:0051309"}


id: PBO:0053945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1248","termid":"PBO:0053945"}


id: PBO:0079581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 C pseudogene 2","termid":"PBO:0079581"}


id: PBO:0111350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophismin-like histone chaperone/CENP-A amino terminus domain (NTD) isomerase Ani1/Fkbp39","termid":"PBO:0111350"}


id: GO:0033840
data:
  {"annotated_genes":["SJAG_04236"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113861],"is_not":false,"summary":null,"term":"GO:0033840"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: [(1->4)-alpha-D-glucosyl](n) + an NDP-alpha-D-glucose = [(1->4)-alpha-D-glucosyl](n+1) + a ribonucleoside 5'-diphosphate + H+, where NDP is ADP or UDP.","definition_xrefs":["PMID:17472966","RHEA:15873","EC:2.4.1.242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04236":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"alpha-1,4-glucan glucosyltransferase (NDP-glucose donor) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-14378","MetaCyc:2.4.1.242-RXN"],"synonyms":[{"name":"GBSS","type":"related"},{"name":"GBSSI","type":"related"},{"name":"GBSSII","type":"related"},{"name":"NDP-glucose:1,4-alpha-D-glucan 4-alpha-D-glucosyltransferase activity","type":"related"},{"name":"NDPglucose-starch glucosyltransferase activity","type":"related"},{"name":"granule-bound starch synthase I activity","type":"related"},{"name":"granule-bound starch synthase II activity","type":"related"},{"name":"granule-bound starch synthase activity","type":"related"},{"name":"starch granule-bound nucleoside diphosphate glucose-starch glucosyltransferase activity","type":"related"},{"name":"starch synthase II activity","type":"related"},{"name":"waxy protein","type":"related"}],"termid":"GO:0033840","terms_by_termid":{"GO:0033840":null}}


id: PBO:0003387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glutamyl-tRNA amidotransferase alpha subunit (predicted)","termid":"PBO:0003387"}


id: GO:0080102
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methylthiopropyl-glucosinolate = 3-methylsulfinylpropyl-glucosinolate.","definition_xrefs":["PMID:18799661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3-methylthiopropyl glucosinolate S-oxygenase activity","secondary_identifiers":["MetaCyc:RXN-2221"],"termid":"GO:0080102"}


id: FYPO:0007511
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell undergoes normal (i.e. indistinguishable from wild type) mitosis upon release from a following release from a G2/M cell cycle block imposed by activation of the mitotic DNA replication checkpoint.","definition_xrefs":["PomBase:mah","PMID:17690116","PomBase:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitosis","termid":"FYPO:0001007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal mitosis following cell cycle arrest in response to mitotic DNA replication checkpoint","synonyms":[{"name":"normal mitosis following cell cycle arrest in response to DNA replication checkpoint during mitotic cell cycle","type":"exact"},{"name":"normal mitosis following cell cycle arrest in response to mitotic DNA replication checkpoint during vegetative growth","type":"exact"},{"name":"normal mitosis following release from a mitotic DNA replication cell cycle block","type":"exact"}],"termid":"FYPO:0007511"}


id: PBO:0090782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARP7 family RNA-binding protein Pof8/Lar7","termid":"PBO:0090782"}


id: PR:000037084
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tropomyosin cdc8 homodimer (Schizosaccharomyces pombe) that is composed of two subunits of the acetylated form of tropomyosin cdc8.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropomyosin cdc8 homodimer (Schizosaccharomyces pombe)","termid":"PR:000037083"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin cdc8 homodimer, acetylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC27F1.02c","synonyms":[{"name":"Spom-(cdc8/AcRes+)*2","type":"exact"}],"termid":"PR:000037084"}


id: SO:0000005
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The many tandem repeats (identical or related) of a short basic repeating unit; many have a base composition or other property different from the genome average that allows them to be separated from the bulk (main band) genomic DNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"tandem_repeat","termid":"SO:0000705"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"satellite_DNA","secondary_identifiers":["http://en.wikipedia.org/wiki/Satellite_DNA"],"synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:satellite","type":"exact"},{"name":"satellite DNA","type":"exact"}],"termid":"SO:0000005"}


id: GO:1901025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of ripoptosome components leading to apoptosis via the extrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:TermGenie","GOC:mtg_apoptosis","PMID:22274400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ripoptosome assembly","termid":"GO:0097343"},{"relation_name":"part_of","term_name":"extrinsic apoptotic signaling pathway","termid":"GO:0097191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"ripoptosome assembly involved in extrinsic apoptotic signaling pathway","termid":"GO:1901025"}


id: PBO:0076092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STUB1 pseudogene 1","termid":"PBO:0076092"}


id: PBO:0089589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone demethylase SWIRM2","termid":"PBO:0089589"}


id: MOD:02026
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteinyl-L-glycine dipeptide and an L-cysteine residue by a disulfide bond to form S-(cysteinyl-glycyl)-L-cysteine.","definition_xrefs":["PubMed:29627744","PubMed:27936627","PubMed:20594348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"disulfide conjugated residue","termid":"MOD:01862"},{"relation_name":"part_of","term_name":"L-cysteine glutathione disulfide","termid":"MOD:00234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(cysteinyl-glycyl)-L-cysteine","termid":"MOD:02026"}


id: GO:1900494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of butyryl-CoA biosynthetic process from acetyl-CoA.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid biosynthetic process","termid":"GO:0042304"},{"relation_name":"is_a","term_name":"regulation of acyl-CoA biosynthetic process","termid":"GO:0050812"},{"relation_name":"regulates","term_name":"butyryl-CoA biosynthetic process from acetyl-CoA","termid":"GO:0044579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0055086","GO:0006629","GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"regulation of butyryl-CoA biosynthetic process from acetyl-CoA","synonyms":[{"name":"regulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"}],"termid":"GO:1900494"}


id: PBO:0034660
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_localization_from_kinetochore_to_spindle_during_meiosis_I","termid":"PBO:0034660"}


id: PBO:0066584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHOA intronic transcript 1","termid":"PBO:0066584"}


id: PBO:0004758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Cwf28","termid":"PBO:0004758"}


id: PBO:0071566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 32","termid":"PBO:0071566"}


id: PBO:0112968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyprenol reductase Dfg10","termid":"PBO:0112968"}


id: GO:0005042
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a netrin signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["PMID:15960985","GOC:dph","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"netrin receptor activity","termid":"GO:0005042"}


id: PBO:0081756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 687","termid":"PBO:0081756"}


id: GO:0004983
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with neuropeptide Y to initiate a change in cell activity.","definition_xrefs":["PMID:9315606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"neuropeptide Y receptor activity","termid":"GO:0004983"}


id: GO:2000686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of rubidium ion transmembrane transporter activity.","definition_xrefs":["GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of rubidium ion transmembrane transporter activity (obsolete GO:2000686)","synonyms":[{"name":"regulation of Rb+ transmembrane transporter activity","type":"exact"},{"name":"regulation of rubidium cation transmembrane transporter activity","type":"exact"},{"name":"regulation of rubidium transmembrane transporter activity","type":"related"}],"termid":"GO:2000686"}


id: PBO:0052755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 47","termid":"PBO:0052755"}


id: PBO:0002468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body protein Nuf2","termid":"PBO:0002468"}


id: GO:0002565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immune receptor genes are diversified through gene conversion.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors","termid":"GO:0002200"},{"relation_name":"is_a","term_name":"somatic cell DNA recombination","termid":"GO:0016444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006310"],"is_obsolete":false,"name":"somatic diversification of immune receptors via gene conversion","termid":"GO:0002565"}


id: GO:0045492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of xylan, a polymer containing a beta-1,4-linked D-xylose backbone.","definition_xrefs":["GOC:go_curators","PMID:11931668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylan metabolic process","termid":"GO:0045491"},{"relation_name":"is_a","term_name":"cell wall polysaccharide biosynthetic process","termid":"GO:0070592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0071554","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"xylan biosynthetic process","synonyms":[{"name":"xylan anabolism","type":"exact"},{"name":"xylan biosynthesis","type":"exact"},{"name":"xylan formation","type":"exact"},{"name":"xylan synthesis","type":"exact"}],"termid":"GO:0045492"}


id: PBO:0056489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYC associated factor X","termid":"PBO:0056489"}


id: PBO:0045388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPP9 antisense RNA 1","termid":"PBO:0045388"}


id: GO:0050221
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (5Z,13E)-(15S)-9-alpha,11-alpha,15-trihydroxyprosta-5,13-dienoate + NADP+ = (5Z,13E)-(15S)-11-alpha,15-dihydroxy-9-oxoprosta-5,13-dienoate + NADPH.","definition_xrefs":["MetaCyc:PROSTAGLANDIN-E2-9-REDUCTASE-RXN","EC:1.1.1.189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"prostaglandin E2 9-reductase activity","secondary_identifiers":["Reactome:R-HSA-2161651","RHEA:24508"],"synonyms":[{"name":"(5Z,13E)-(15S)-9alpha,11alpha,15-trihydroxyprosta-5,13-dienoate:NADP+ 9-oxidoreductase activity","type":"related"},{"name":"9-keto-prostaglandin E(2) reductase activity","type":"related"},{"name":"9-keto-prostaglandin E2 reductase activity","type":"related"},{"name":"9-ketoprostaglandin reductase activity","type":"related"},{"name":"PGE(2) 9-ketoreductase activity","type":"related"},{"name":"PGE(2) 9-oxoreductase activity","type":"related"},{"name":"PGE-9-ketoreductase activity","type":"related"},{"name":"PGE2 9-ketoreductase activity","type":"related"},{"name":"PGE2 9-oxoreductase activity","type":"related"},{"name":"PGE2-9-OR","type":"related"},{"name":"PGE2-9-ketoreductase activity","type":"related"},{"name":"prostaglandin E 9-ketoreductase activity","type":"related"},{"name":"prostaglandin E2-9-oxoreductase activity","type":"related"},{"name":"prostaglandin-E(2) 9-oxoreductase activity","type":"related"},{"name":"prostaglandin-E2 9-oxoreductase activity","type":"related"},{"name":"reductase, 15-hydroxy-9-oxoprostaglandin","type":"related"}],"termid":"GO:0050221"}


id: GO:0008848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete enterobactin synthetase (obsolete GO:0008848)","synonyms":[{"name":"enterobactin synthetase","type":"exact"},{"name":"enterochelin synthetase activity","type":"exact"},{"name":"nonribosomal peptide synthetase","type":"related"}],"termid":"GO:0008848"}


id: PBO:0083625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin ligase and putative helicase; involved in synthesis-dependent strand annealing-mediated homologous recombination; ensures precise end-joining along with Srs2p in the Yku70p/Yku80p/Lig4p-dependent NHEJ pathway; controls 2-micron plasmid copy number by regulating the levels of the Flp1p recombinase; localizes to both the mitochondrion and the nucleus; contains a Snf2/Swi2 family ATPase/helicase and a RING finger domain; null mutant displays increased levels of spontaneous Rad52p foci","termid":"PBO:0083625"}


id: PBO:0072731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S1PR1 divergent transcript","termid":"PBO:0072731"}


id: GO:0052546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pectin, a polymer containing a backbone of alpha-1,4-linked D-galacturonic acid residues, as part of the organization and biogenesis of the cell wall.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pectin metabolic process","termid":"GO:0045488"},{"relation_name":"part_of","term_name":"plant-type cell wall organization","termid":"GO:0009664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0071554"],"is_obsolete":false,"name":"cell wall pectin metabolic process","synonyms":[{"name":"cell wall pectin metabolism","type":"exact"},{"name":"cellulose and pectin-containing cell wall pectin metabolic process","type":"exact"},{"name":"pectin metabolism during cell wall biogenesis","type":"exact"},{"name":"plant-type cell wall pectin metabolic process","type":"exact"}],"termid":"GO:0052546"}


id: PBO:0114296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double strand break localizing protein Dbl1, implicated in DNA repair","termid":"PBO:0114296"}


id: GO:0031673
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A relatively pale zone traversing the center of the A band of a sarcomere, visible in relaxed muscle fibers; consists of the central portion of thick (myosin) filaments that are not overlapped by thin (actin) filaments.","definition_xrefs":["ISBN:0321204131","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"A band","termid":"GO:0031672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"H zone","secondary_identifiers":["Wikipedia:Sarcomere#bands"],"synonyms":[{"name":"H band","type":"exact"},{"name":"H disc","type":"exact"}],"termid":"GO:0031673"}


id: PBO:0028889
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_elongated_multinucleate_cell","termid":"PBO:0028889"}


id: PBO:0114071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase 9","termid":"PBO:0114071"}


id: PBO:0047030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 95 member A","termid":"PBO:0047030"}


id: PBO:0051954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol 1,4,5-trisphosphate receptor type 2","termid":"PBO:0051954"}


id: PBO:0060645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor coactivator 4 pseudogene 4","termid":"PBO:0060645"}


id: SO:0001751
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A SL2_acceptor_site which appends the SL6 RNA leader sequence to the 5' end of an mRNA. SL6 acceptor sites occur in genes in internal segments of polycistronic transcripts.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SL2_acceptor_site","termid":"SO:0000709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SL6_acceptor_site","synonyms":[{"name":"SL6 acceptor site","type":"exact"}],"termid":"SO:0001751"}


id: GO:0015046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: reduced rubredoxin + NADP+ = oxidized rubredoxin + NADPH + H+.","definition_xrefs":["RHEA:13949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rubredoxin-NAD(P)+ reductase activity","termid":"GO:0015045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"rubredoxin-NADP+ reductase activity","termid":"GO:0015046"}


id: PBO:0053635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 681","termid":"PBO:0053635"}


id: PBO:0005085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unconventional prefoldin involved in translation initiation (predicted)","termid":"PBO:0005085"}


id: PBO:0073895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 13 member 1","termid":"PBO:0073895"}


id: PBO:0027821
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_single-stranded_DNA_binding","termid":"PBO:0027821"}


id: GO:1905527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of Golgi lumen acidification.","definition_xrefs":["GO_REF:0000058","PMID:23447592","GOC:TermGenie","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular pH reduction","termid":"GO:0032848"},{"relation_name":"is_a","term_name":"regulation of Golgi lumen acidification","termid":"GO:1905526"},{"relation_name":"negatively_regulates","term_name":"Golgi lumen acidification","termid":"GO:0061795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of Golgi lumen acidification","synonyms":[{"name":"down regulation of Golgi lumen acidification","type":"exact"},{"name":"down-regulation of Golgi lumen acidification","type":"exact"},{"name":"downregulation of Golgi lumen acidification","type":"exact"},{"name":"inhibition of Golgi lumen acidification","type":"narrow"}],"termid":"GO:1905527"}


id: PBO:0040094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosyltransferase 1","termid":"PBO:0040094"}


id: PBO:0043385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calaxin","termid":"PBO:0043385"}


id: PBO:0040819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BH3 interacting domain death agonist","termid":"PBO:0040819"}


id: GO:0051466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of corticotropin-releasing hormone from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of corticotropin-releasing hormone secretion","termid":"GO:0043397"},{"relation_name":"is_a","term_name":"positive regulation of peptide hormone secretion","termid":"GO:0090277"},{"relation_name":"positively_regulates","term_name":"corticotropin-releasing hormone secretion","termid":"GO:0043396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of corticotropin-releasing hormone secretion","synonyms":[{"name":"activation of corticotropin-releasing hormone secretion","type":"narrow"},{"name":"positive regulation of CRF secretion","type":"exact"},{"name":"positive regulation of CRH secretion","type":"exact"},{"name":"positive regulation of corticotropin-releasing factor secretion","type":"exact"},{"name":"stimulation of corticotropin-releasing hormone secretion","type":"narrow"},{"name":"up regulation of corticotropin-releasing hormone secretion","type":"exact"},{"name":"up-regulation of corticotropin-releasing hormone secretion","type":"exact"},{"name":"upregulation of corticotropin-releasing hormone secretion","type":"exact"}],"termid":"GO:0051466"}


id: PR:O43041
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trs23 gene.","definition_xrefs":["UniProtKB:O43041","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transport protein particle subunit trs23 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.12","synonyms":[{"name":"Spom972h-trs23","type":"exact"},{"name":"TRAPP subunit trs23 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43041"}


id: GO:0060991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The aggregation, arrangement and bonding together of a set of macromolecules to form a macromolecular complex that contains a tube of lipid surrounded by a protein coat involved in cytokinesis.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete lipid tube assembly involved in cytokinesis (obsolete GO:0060991)","synonyms":[{"name":"lipid tube assembly involved in cytokinesis","type":"exact"},{"name":"lipid tubulation involved in cytokinesis","type":"exact"}],"termid":"GO:0060991"}


id: PBO:0090946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein disulfide isomerase Pdi4","termid":"PBO:0090946"}


id: GO:0031053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process involved in the conversion of a primary microRNA transcript into a pre-microRNA molecule.","definition_xrefs":["PMID:15211354","PMID:25799998","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miRNA processing","termid":"GO:0035196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"primary miRNA processing","secondary_identifiers":["GO:1990744","GO:1990729"],"synonyms":[{"name":"pri-miRNA processing","type":"exact"},{"name":"primary miRNA methylation","type":"narrow"},{"name":"primary miRNA modification","type":"exact"},{"name":"primary microRNA processing","type":"exact"}],"termid":"GO:0031053"}


id: PBO:0039704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apelin","termid":"PBO:0039704"}


id: PBO:0057824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3143","termid":"PBO:0057824"}


id: FYPO:0001253
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is longer than normal, has three or more nuclei and two or more septa, and the septa are not grouped together, but are located so as to form separate compartments with a single nucleus in each.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated multinucleate vegetative cell","termid":"FYPO:0000133"},{"relation_name":"is_a","term_name":"elongated multiseptate vegetative cell","termid":"FYPO:0000223"},{"relation_name":"is_a","term_name":"elongated multinucleate multiseptate cell, single septa between nuclei","termid":"FYPO:0003343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0000005","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"elongated multinucleate multiseptate vegetative cell, single septa between nuclei","secondary_identifiers":["FYPO:0005056"],"synonyms":[{"name":"elongated multinucleate multiseptate cell, single septa between nuclei during vegetative growth","type":"exact"},{"name":"elongated multinucleate multiseptate vegetative cell, single septa between nuclei during mitotic cell cycle","type":"related"},{"name":"elongated multiseptate cell, with three or more nuclei and single septa between nuclei during vegetative growth","type":"exact"},{"name":"elongated multiseptate vegetative cell, with three or more nuclei and single septa between nuclei","type":"exact"},{"name":"elongated multiseptate vegetative cell, with three or more nuclei and single septa between nuclei during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001253"}


id: GO:0032326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the Mo-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear molybdenum (Mo) ion coordinated by one or two molybdopterin ligands.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mo-molybdopterin cofactor metabolic process","termid":"GO:0019720"},{"relation_name":"is_a","term_name":"molybdopterin cofactor catabolic process","termid":"GO:0032325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Mo-molybdopterin cofactor catabolic process","synonyms":[{"name":"Mo-molybdopterin cofactor breakdown","type":"exact"},{"name":"Mo-molybdopterin cofactor catabolism","type":"exact"},{"name":"Mo-molybdopterin cofactor degradation","type":"exact"},{"name":"Moco catabolic process","type":"broad"},{"name":"Moco catabolism","type":"broad"}],"termid":"GO:0032326"}


id: GO:0002585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antigen processing and presentation of peptide antigen.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation","termid":"GO:0002579"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002583"},{"relation_name":"positively_regulates","term_name":"antigen processing and presentation of peptide antigen","termid":"GO:0048002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antigen processing and presentation of peptide antigen","synonyms":[{"name":"activation of antigen processing and presentation of peptide antigen","type":"narrow"},{"name":"positive regulation of peptide antigen processing and presentation","type":"exact"},{"name":"stimulation of antigen processing and presentation of peptide antigen","type":"narrow"},{"name":"up regulation of antigen processing and presentation of peptide antigen","type":"exact"},{"name":"up-regulation of antigen processing and presentation of peptide antigen","type":"exact"},{"name":"upregulation of antigen processing and presentation of peptide antigen","type":"exact"}],"termid":"GO:0002585"}


id: GO:0042785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any mechanism of active immune avoidance which works by regulating host cytokine networks, e.g. by secreting proteins that mimic cytokine receptors that act to sequester host cytokines and inhibit action. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:9600978","PMID:10620615","PMID:9275219"],"gene_count":0,"genotype_count":0,"name":"obsolete evasion of host immune response via modulation of host cytokine network (obsolete GO:0042785)","synonyms":[{"name":"active evasion of host immune response via regulation of host cytokine network","type":"related"},{"name":"active evasion of immune response of other organism via regulation of cytokine network of other organism involved in symbiotic interaction","type":"broad"},{"name":"active immune evasion via modulation of host cytokine network","type":"exact"},{"name":"active immune evasion via regulation of host cytokine network","type":"exact"},{"name":"evasion of host immune response via regulation of host cytokine network","type":"exact"}],"termid":"GO:0042785"}


id: GO:0046560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of proteins with broad specificity, cleaving Phe24-Phe, but not Leu15-Tyr and Phe25-Tyr in the B chain of insulin.","definition_xrefs":["EC:3.4.23.32"],"gene_count":0,"genotype_count":0,"name":"obsolete scytalidopepsin B activity (obsolete GO:0046560)","synonyms":[{"name":"Ganoderma lucidum aspartic proteinase activity","type":"related"},{"name":"Ganoderma lucidum carboxyl proteinase activity","type":"related"},{"name":"SLB","type":"related"},{"name":"Scytalidium aspartic proteinase B activity","type":"related"},{"name":"Scytalidium lignicolum aspartic proteinase B","type":"related"},{"name":"scytalidopepsin B activity","type":"exact"}],"termid":"GO:0046560"}


id: PBO:0074482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET and MYND domain containing 1","termid":"PBO:0074482"}


id: GO:0071795
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein upon poly-ubiquitination formed by linkages between lysine residues at position 11 in the target protein.","definition_xrefs":["GOC:sp","PMID:18775313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyubiquitin modification-dependent protein binding","termid":"GO:0031593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"K11-linked polyubiquitin modification-dependent protein binding","termid":"GO:0071795"}


id: FYPO:0000183
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which the export of polyadenylated mRNA from the nucleus is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mRNA export from nucleus","termid":"FYPO:0000204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"abnormal poly(A)+ mRNA export from nucleus","synonyms":[{"name":"abnormal poly(A)+ mRNA export from nucleus during mitotic cell cycle","type":"related"},{"name":"abnormal poly(A)+ mRNA export from nucleus during vegetative growth","type":"exact"},{"name":"abnormal polyadenylated mRNA export from nucleus","type":"exact"}],"termid":"FYPO:0000183"}


id: PBO:0035695
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-involved_in_or_involved_in_regulation_of","termid":"PBO:0035695"}


id: PBO:0068142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 449","termid":"PBO:0068142"}


id: GO:0097647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by amylin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:bhm","PMID:18687416","PMID:10871296","PMID:12037140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcitonin family receptor signaling pathway","termid":"GO:0097646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"amylin receptor signaling pathway","synonyms":[{"name":"amilyn receptor signalling pathway","type":"exact"}],"termid":"GO:0097647"}


id: PBO:0028764
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nuclear_periphery_during_cellular_response_to_heat","termid":"PBO:0028764"}


id: PBO:0056424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARCO like","termid":"PBO:0056424"}


id: GO:0071824
data:
  {"annotated_genes":["SJAG_02906","SJAG_02303","SJAG_02119","SJAG_03867","SJAG_00307","SJAG_03221","SJAG_00757","SJAG_03982","SJAG_03128","SJAG_03285","SJAG_02607","SJAG_04638","SJAG_04547","SJAG_01378","SJAG_04257","SJAG_00684","SJAG_04879","SJAG_02872","SJAG_02174","SJAG_02314","SJAG_00873","SJAG_01611","SJAG_03217","SJAG_01410","SJAG_02079","SJAG_03048","SJAG_03183","SJAG_00756","SJAG_01708","SJAG_01771","SJAG_03007","SJAG_00939","SJAG_03619","SJAG_02908","SJAG_03956","SJAG_02458","SJAG_01823","SJAG_05273","SJAG_03220","SJAG_02267","SJAG_02513","SJAG_02198","SJAG_04530","SJAG_01837","SJAG_00766","SJAG_01523","SJAG_03095","SJAG_03905","SJAG_00327","SJAG_02664","SJAG_00045","SJAG_02708","SJAG_00692","SJAG_02691","SJAG_00741","SJAG_02074","SJAG_01475","SJAG_04654","SJAG_04177","SJAG_00718","SJAG_00116","SJAG_04989","SJAG_03120","SJAG_01207","SJAG_04670","SJAG_03685","SJAG_04274","SJAG_01707","SJAG_04995","SJAG_02416","SJAG_01653","SJAG_00247","SJAG_02465","SJAG_05321","SJAG_02813","SJAG_04696","SJAG_04581","SJAG_04038","SJAG_02667","SJAG_04272","SJAG_01808","SJAG_03900"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95201,102407,114876,112544,109179,110285,114911,86126,113763,91532,88842,98970,103397,107238,84938,85756,95449,90753,111146,98122],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034080"},{"annotations":[103399,105993,109627,111472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140529"},{"annotations":[88719,92233,96602,98254,95115,103713,106349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000730"},{"annotations":[106367,108243,109614,101524,86838,101595,113518],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051382"},{"annotations":[99382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140530"},{"annotations":[92984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000707"},{"annotations":[106355,103718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010772"},{"annotations":[86501,106616,95483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902977"},{"annotations":[99384,106617,111086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902985"},{"annotations":[114013],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905560"},{"annotations":[110606,103787,92510,91130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006334"},{"annotations":[86129,93152,112979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006337"},{"annotations":[109358,107329,93153,109669,88426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034728"},{"annotations":[105033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006294"},{"annotations":[85716,112751,98438],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905561"},{"annotations":[85776,111254],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0045899"},{"annotations":[63615,105204,91805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001188"},{"annotations":[66467,83461,84412,85976,104550,113415,84671,85346,90204,110860,64276,92091,111453],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051123"},{"annotations":[99133,112278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070898"},{"annotations":[95785,104174,112015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905324"},{"annotations":[69023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001113"}]},"cv_name":"biological_process","definition":"Any 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id: GO:0051225
data:
  {"annotated_genes":["SJAG_01756","SJAG_02332","SJAG_02761","SJAG_04464","SJAG_03116","SJAG_01546","SJAG_02886","SJAG_01297","SJAG_04841","SJAG_03073","SJAG_01613","SJAG_00244","SJAG_00856","SJAG_02246","SJAG_02336","SJAG_01224","SJAG_00773","SJAG_03062","SJAG_02045","SJAG_03540","SJAG_03835","SJAG_04901","SJAG_02609","SJAG_01215","SJAG_04745","SJAG_07018","SJAG_00794"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87442,96146,102493,113264],"is_not":false,"summary":null,"term":"GO:0051225"},{"annotations":[74532,90825,91369],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000073"},{"annotations":[90826,92834,95282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090306"},{"annotations":[95283,97489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140642"},{"annotations":[92835,105079,95284,99113],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990810"},{"annotations":[97046,114726,92937,96445,105662,93354,106640,92838,111113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090307"},{"annotations":[93355,94687,90829,97494,104315,95914,96447,99965],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061804"},{"annotations":[95290,97495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140641"},{"annotations":[97496,95291,104906,93356,90830],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051256"},{"annotations":[107495],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0110161"},{"annotations":[107072],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1901673"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the spindle, the array of microtubules and associated molecules that serves to move duplicated chromosomes apart.","definition_xrefs":["GOC:expert_rg","GOC:mtg_sensu","GOC:ai","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle organization","termid":"GO:0007051"},{"relation_name":"is_a","term_name":"non-membrane-bounded organelle assembly","termid":"GO:0140694"},{"relation_name":"part_of","term_name":"chromosome segregation","termid":"GO:0007059"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00773":null,"SJAG_00794":null,"SJAG_00856":null,"SJAG_01215":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01756":null,"SJAG_02045":null,"SJAG_02246":null,"SJAG_02332":null,"SJAG_02336":null,"SJAG_02609":null,"SJAG_02761":null,"SJAG_02886":null,"SJAG_03062":null,"SJAG_03073":null,"SJAG_03116":null,"SJAG_03540":null,"SJAG_03835":null,"SJAG_04464":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_04901":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0000226","GO:0007049","GO:0044085"],"is_obsolete":false,"name":"spindle assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0051226","GO:0051227"],"synonyms":[{"name":"bipolar spindle biosynthesis","type":"exact"},{"name":"bipolar spindle formation","type":"exact"},{"name":"spindle biosynthesis","type":"exact"},{"name":"spindle formation","type":"exact"}],"termid":"GO:0051225","terms_by_termid":{"GO:0000073":null,"GO:0051225":null,"GO:0051256":null,"GO:0061804":null,"GO:0090306":null,"GO:0090307":null,"GO:0110161":null,"GO:0140641":null,"GO:0140642":null,"GO:1901673":null,"GO:1990810":null}}


id: GO:0038034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the absence of a ligand or the withdrawal of a ligand from a receptor.","definition_xrefs":["GOC:ppm","PMID:15044679","GOC:pr","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"signal transduction in absence of ligand","synonyms":[{"name":"addiction receptor signaling pathway","type":"broad"},{"name":"basal signaling","type":"narrow"},{"name":"dependence receptor signaling pathway","type":"broad"},{"name":"negative signal transduction","type":"related"},{"name":"non-classical signal transduction","type":"broad"},{"name":"signal transduction in absence of agonist","type":"exact"}],"termid":"GO:0038034"}


id: GO:0010701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the regulated release of norepinephrine.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of norepinephrine secretion","termid":"GO:0014061"},{"relation_name":"is_a","term_name":"positive regulation of catecholamine secretion","termid":"GO:0033605"},{"relation_name":"positively_regulates","term_name":"norepinephrine secretion","termid":"GO:0048243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of norepinephrine secretion","termid":"GO:0010701"}


id: PBO:0057438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 555","termid":"PBO:0057438"}


id: FYPO:0007223
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the establishment of chromatin silencing at centromere outer repeat regions is decreased.","definition_xrefs":["PomBase:mah","PMID:31822915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at centromere outer repeat","termid":"FYPO:0002346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased establishment of chromatin silencing at centromere outer repeat region","synonyms":[{"name":"decreased establishment of chromatin silencing at centromere outer repeat at centromere otr during vegetative growth","type":"exact"},{"name":"decreased establishment of chromatin silencing at centromere outer repeat at centromeric outer repeat during vegetative growth","type":"exact"},{"name":"decreased establishment of chromatin silencing at centromere outer repeat at pericentric region during vegetative growth","type":"related"},{"name":"decreased establishment of chromatin silencing at centromere outer repeat at pericentromeric region during vegetative growth","type":"related"},{"name":"decreased establishment of chromatin silencing at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"reduced establishment of chromatin silencing at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0007223"}


id: PBO:0003045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maltase alpha-glucosidase Mal1","termid":"PBO:0003045"}


id: GO:0170002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A sodium-specific negative tropism that is crucial for surviving and thriving under high salinity.","definition_xrefs":["PMID:36243013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropism","termid":"GO:0009606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"halotropism","synonyms":[{"name":"root halotropism","type":"exact"}],"termid":"GO:0170002"}


id: PBO:0065944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD1 checkpoint DNA exonuclease","termid":"PBO:0065944"}


id: GO:1904113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of muscle filament sliding.","definition_xrefs":["GOC:kmv","PMID:25717181","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle filament sliding","termid":"GO:0032971"},{"relation_name":"is_a","term_name":"negative regulation of muscle contraction","termid":"GO:0045932"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"negatively_regulates","term_name":"muscle filament sliding","termid":"GO:0030049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of muscle filament sliding","synonyms":[{"name":"down regulation of muscle filament sliding","type":"exact"},{"name":"down-regulation of muscle filament sliding","type":"exact"},{"name":"downregulation of muscle filament sliding","type":"exact"},{"name":"inhibition of muscle filament sliding","type":"narrow"}],"termid":"GO:1904113"}


id: PBO:0045135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal assembly factor 4","termid":"PBO:0045135"}


id: PBO:0091123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit VII Cox7","termid":"PBO:0091123"}


id: PBO:0076664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thromboxane A synthase 1","termid":"PBO:0076664"}


id: PBO:0085912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may interact with ribosomes, based on co-purification experiments; similar to transcriptional regulators from the zinc cluster (binuclear cluster) family; null mutant is sensitive to caffeine","termid":"PBO:0085912"}


id: GO:0060367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the sagittal suture is generated and organized.","definition_xrefs":["GOC:dph","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial suture morphogenesis","termid":"GO:0060363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sagittal suture morphogenesis","termid":"GO:0060367"}


id: PBO:0086536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; partially overlaps the verified ORF RSF2","termid":"PBO:0086536"}


id: PBO:0085568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein expressed during sporulation; SPS2 has a paralog, SPS22, that arose from the whole genome duplication; redundant with Sps22p for organization of the beta-glucan layer of the spore wall; S. pombe ortholog is a spore wall component","termid":"PBO:0085568"}


id: PBO:0073733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC1A2 antisense RNA 1","termid":"PBO:0073733"}


id: PBO:0059856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methenyltetrahydrofolate synthetase","termid":"PBO:0059856"}


id: GO:0061265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells of the mesonephric nephron tubule as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in mesonephros development","termid":"GO:0061208"},{"relation_name":"is_a","term_name":"nephron tubule epithelial cell differentiation","termid":"GO:0072160"},{"relation_name":"part_of","term_name":"mesonephric nephron tubule development","termid":"GO:0061242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric nephron tubule epithelial cell differentiation","termid":"GO:0061265"}


id: MOD:01190
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modification from Unimod Chemical derivative. OBSOLETE because duplicate and redundant with MOD:01006. Remap to MOD:01006.","definition_xrefs":["Unimod:534"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01190 dibromo (obsolete MOD:01190)","synonyms":[{"name":"Dibromo","type":"related"}],"termid":"MOD:01190"}


id: PATO:0000681
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000681 incidence value (obsolete PATO:0000681)","termid":"PATO:0000681"}


id: PBO:0036157
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cytoskeleton_during_meiosis","termid":"PBO:0036157"}


id: FYPO:0003530
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the S-phase DNA damage checkpoint (also known as the intra-S phase DNA damage checkpoint) is normal (i.e. indistinguishable from wild type). The S phase DNA damage checkpoint slows progression through S phase in response to DNA damage. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic DNA damage checkpoint","termid":"FYPO:0001705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000631","FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal S-phase DNA damage checkpoint","synonyms":[{"name":"normal S-phase DNA damage checkpoint activation","type":"exact"},{"name":"normal S-phase DNA damage checkpoint during mitotic cell cycle","type":"exact"},{"name":"normal S-phase DNA damage checkpoint during vegetative growth","type":"exact"},{"name":"normal intra-S DNA damage checkpoint","type":"exact"},{"name":"normal mitotic S-phase DNA damage checkpoint","type":"exact"}],"termid":"FYPO:0003530"}


id: GO:0047648
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-methylhexanamide + H2O = hexanoate + methylammonium.","definition_xrefs":["RHEA:20081","EC:3.5.1.39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"alkylamidase activity","secondary_identifiers":["KEGG_REACTION:R03620","MetaCyc:ALKYLAMIDASE-RXN"],"synonyms":[{"name":"N-methylhexanamide amidohydrolase activity","type":"related"}],"termid":"GO:0047648"}


id: GO:0102691
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + N-benzyladenine = H+ + benzyladenine-7-N-glucoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-glucose:benzyladenine 7-N-glucosyltransferase activity (obsolete GO:0102691)","termid":"GO:0102691"}


id: PBO:0002718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Noc1 (predicted)","termid":"PBO:0002718"}


id: GO:0017085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insecticide stimulus. Insecticides are chemicals used to kill insects.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to toxic substance","termid":"GO:0009636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to insecticide","synonyms":[{"name":"insecticide resistance","type":"related"},{"name":"insecticide susceptibility/resistance","type":"related"}],"termid":"GO:0017085"}


id: GO:1990980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of copper ions passing through the blood-cerebrospinal fluid barrier.","definition_xrefs":["PMID:24614235"],"gene_count":0,"genotype_count":0,"name":"obsolete copper ion transport across blood-CSF barrier (obsolete GO:1990980)","synonyms":[{"name":"copper ion transport across BCB","type":"exact"},{"name":"copper ion transport across blood-cerebrospinal fluid barrier","type":"exact"}],"termid":"GO:1990980"}


id: PBO:0061553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-nucleotidase, cytosolic IIIB","termid":"PBO:0061553"}


id: PBO:0027840
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_viability_in_stationary_phase_during_nitrogen_limitation","termid":"PBO:0027840"}


id: GO:0019638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 6-hydroxycineole (6-hydroxy-1,8-epoxy-p-menthane), a hydrocarbon with the formula C10H18O2.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpenoid metabolic process","termid":"GO:0016098"},{"relation_name":"is_a","term_name":"epoxide metabolic process","termid":"GO:0097176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"6-hydroxycineole metabolic process","synonyms":[{"name":"6-endo-hydroxycineole metabolic process","type":"exact"},{"name":"6-endo-hydroxycineole metabolism","type":"exact"},{"name":"6-hydroxycineole metabolism","type":"exact"},{"name":"hydroxycineol metabolic process","type":"exact"},{"name":"hydroxycineol metabolism","type":"exact"}],"termid":"GO:0019638"}


id: GO:2001011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of plant-type cell wall cellulose biosynthetic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"positive regulation of cellulose biosynthetic process","termid":"GO:2001008"},{"relation_name":"is_a","term_name":"regulation of plant-type cell wall cellulose biosynthetic process","termid":"GO:2001009"},{"relation_name":"positively_regulates","term_name":"plant-type cell wall cellulose biosynthetic process","termid":"GO:0052324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of plant-type cell wall cellulose biosynthetic process","synonyms":[{"name":"positive regulation of cell wall cellulose biosynthesis","type":"exact"},{"name":"positive regulation of cellulose biosynthesis during cell wall biosynthesis","type":"related"}],"termid":"GO:2001011"}


id: GO:0046072
data:
  {"annotated_genes":["SJAG_04657"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dTDP, deoxyribosylthymine diphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside diphosphate metabolic process","termid":"GO:0009196"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide metabolic process","termid":"GO:0009219"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04657":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dTDP metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dTDP metabolism","type":"exact"}],"termid":"GO:0046072","terms_by_termid":{"GO:0006233":null}}


id: FYPO:0006920
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency of DNA recombination at replication fork barriers is decreased.","definition_xrefs":["PMID:31149897","PomBase:mah","PMID:28586299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination during vegetative growth","termid":"FYPO:0001345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000293"],"is_obsolete":false,"name":"decreased DNA recombination at mitotic DNA replication fork barriers","synonyms":[{"name":"decreased DNA recombination at mitotic DNA replication fork barriers during mitotic cell cycle","type":"related"},{"name":"decreased DNA recombination at mitotic DNA replication fork barriers during vegetative growth","type":"exact"},{"name":"decreased recombination at mitotic DNA replication fork barriers","type":"exact"},{"name":"reduced DNA recombination at mitotic DNA replication fork barriers","type":"exact"}],"termid":"FYPO:0006920"}


id: GO:0046583
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a cation or cations from the inside of the cell to the outside of the cell across a membrane.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transporter activity","termid":"GO:0008324"},{"relation_name":"is_a","term_name":"efflux transmembrane transporter activity","termid":"GO:0015562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"monoatomic cation efflux transmembrane transporter activity","synonyms":[{"name":"cation efflux permease activity","type":"exact"},{"name":"cation efflux transmembrane transporter activity","type":"broad"}],"termid":"GO:0046583"}


id: PBO:0091084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSB-forming protein Rec12/Spo11","termid":"PBO:0091084"}


id: PBO:0035945
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_deactivation_of_mitotic_spindle_assembly_checkpoint","termid":"PBO:0035945"}


id: GO:0043263
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extracellular multi-enzyme complex containing up to 11 different enzymes aligned on a non-catalytic scaffolding glycoprotein. Functions to hydrolyze cellulose.","definition_xrefs":["GOC:jl","PMID:15197390","PMID:20373916","PMID:11601609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular non-membrane-bounded organelle","termid":"GO:0043264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"cellulosome","secondary_identifiers":["Wikipedia:Cellulosome","GO:1990296"],"synonyms":[{"name":"scaffoldin complex","type":"narrow"}],"termid":"GO:0043263"}


id: SO:0000765
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000765 cosmid_clone (obsolete SO:0000765)","termid":"SO:0000765"}


id: GO:0015109
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of chromate from one side of a membrane to the other. Chromate is the anion of chromic acid, H2CrO4 (aq) or CrO3.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"chromate transmembrane transporter activity","secondary_identifiers":["RHEA:32819"],"termid":"GO:0015109"}


id: FYPO:0006725
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of microtubule binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type). The relevant gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein-protein interaction","termid":"FYPO:0000703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000702"],"is_obsolete":false,"name":"normal microtubule binding","termid":"FYPO:0006725"}


id: PBO:0027062
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_premeiotic_DNA_replication_initiation_resulting_in_partial_rereplication","termid":"PBO:0027062"}


id: PBO:0110324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetylcholinesterase (Yt blood group)","termid":"PBO:0110324"}


id: PBO:0034425
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-localization_dependent_on_(obsolete_localization_dependent_on)","termid":"PBO:0034425"}


id: PBO:0082811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved component of the MICOS complex; MICOS (formerly MINOS or MitOS) is a mitochondrial inner membrane complex that extends into the intermembrane space and has a role in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane; forms a subcomplex with Mic12p and Mic27p whose assembly and stability requires cardiolipin; homo-oligomers cause membrane bending; ortholog of human MINOS1","termid":"PBO:0082811"}


id: PBO:0058670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6798","termid":"PBO:0058670"}


id: PBO:0044383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily A member 7","termid":"PBO:0044383"}


id: PBO:0111912
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTLH domain","termid":"PBO:0111912"}


id: SO:0000096
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene from proplastid sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"proplastid_sequence","termid":"SO:0000748"},{"relation_name":"is_a","term_name":"plastid_gene","termid":"SO:0000090"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proplastid_gene","synonyms":[{"name":"proplastid gene","type":"exact"}],"termid":"SO:0000096"}


id: GO:0045582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell differentiation","termid":"GO:0045580"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte differentiation","termid":"GO:0045621"},{"relation_name":"is_a","term_name":"positive regulation of T cell activation","termid":"GO:0050870"},{"relation_name":"positively_regulates","term_name":"T cell differentiation","termid":"GO:0030217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of T cell differentiation","synonyms":[{"name":"activation of T cell differentiation","type":"narrow"},{"name":"positive regulation of T cell development","type":"related"},{"name":"positive regulation of T lymphocyte differentiation","type":"exact"},{"name":"positive regulation of T-cell differentiation","type":"exact"},{"name":"positive regulation of T-lymphocyte differentiation","type":"exact"},{"name":"stimulation of T cell differentiation","type":"narrow"},{"name":"up regulation of T cell differentiation","type":"exact"},{"name":"up-regulation of T cell differentiation","type":"exact"},{"name":"upregulation of T cell differentiation","type":"exact"}],"termid":"GO:0045582"}


id: PBO:0073497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SGSM2 antisense RNA 1","termid":"PBO:0073497"}


id: PBO:0074093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 8","termid":"PBO:0074093"}


id: GO:0090540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation, as it occurs in certain types of bacteria, mainly Acetobacter, Sarcina ventriculi and Agrobacteria.","definition_xrefs":["GOC:yaf","PMID:24097954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellulose biosynthetic process","termid":"GO:0030244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"bacterial cellulose biosynthetic process","synonyms":[{"name":"bacterial cellulose biosynthesis","type":"exact"}],"termid":"GO:0090540"}


id: PBO:0082400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of the CAAX farnesyltransferase (FTase); this complex prenylates the a-factor mating pheromone and Ras proteins; required for the membrane localization of Ras proteins and a-factor; homolog of the mammalian FTase beta subunit","termid":"PBO:0082400"}


id: PBO:0005105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bouquet formation protein Bqt3","termid":"PBO:0005105"}


id: GO:0004304
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + estrone = adenosine 3',5'-bisphosphate + estrone 3-sulfate.","definition_xrefs":["EC:2.8.2.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003674","GO:0016782","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"estrone sulfotransferase activity","secondary_identifiers":["RHEA:15973","MetaCyc:ESTRONE-SULFOTRANSFERASE-RXN","Reactome:R-HSA-176664"],"synonyms":[{"name":"3'-phosphoadenylyl sulfate-estrone 3-sulfotransferase activity","type":"related"},{"name":"3'-phosphoadenylyl-sulfate:estrone 3-sulfotransferase activity","type":"related"},{"name":"3'-phosphoadenylylsulfate:oestrone sulfotransferase activity","type":"related"},{"name":"estrogen sulfotransferase","type":"broad"},{"name":"estrogen sulphotransferase activity","type":"related"},{"name":"estrone sulphotransferase activity","type":"exact"},{"name":"oestrogen sulphotransferase activity","type":"related"}],"termid":"GO:0004304"}


id: GO:0035255
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an ionotropic glutamate receptor. Ionotropic glutamate receptors bind glutamate and exert an effect through the regulation of ion channels.","definition_xrefs":["GOC:bf","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate receptor binding","termid":"GO:0035254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ionotropic glutamate receptor binding","termid":"GO:0035255"}


id: GO:0009994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized immature germ cell acquires the specialized features of a mature female gamete.","definition_xrefs":["GOC:go_curators","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oocyte differentiation","synonyms":[{"name":"oocyte cell differentiation","type":"exact"}],"termid":"GO:0009994"}


id: PBO:0041816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capping protein regulator and myosin 1 linker 2","termid":"PBO:0041816"}


id: PATO:0001775
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's location of features or characteristics along the dorsal-ventral axis.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positional polarity","termid":"PATO:0001769"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dorsal-ventral polarity","termid":"PATO:0001775"}


id: PR:O14290
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9E9.04 gene.","definition_xrefs":["UniProtKB:O14290","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C9E9.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.04","synonyms":[{"name":"Spom972h-SPAC9E9.04","type":"exact"}],"termid":"PR:O14290"}


id: PBO:0059702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 10","termid":"PBO:0059702"}


id: PBO:0054148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1515","termid":"PBO:0054148"}


id: PBO:0043117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIAO2A pseudogene 2","termid":"PBO:0043117"}


id: PBO:0041988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 32","termid":"PBO:0041988"}


id: PBO:0091720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat protein,human RPAP3 ortholog","termid":"PBO:0091720"}


id: PBO:0045942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ephrin B2","termid":"PBO:0045942"}


id: GO:1902417
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of (+)-abscisic acid D-glucopyranosyl ester from one side of a membrane to the other.","definition_xrefs":["PMID:24028845","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucoside transmembrane transporter activity","termid":"GO:0042947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"(+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity","synonyms":[{"name":"ABA-GE transmembrane transporter activity","type":"exact"},{"name":"abscisic acid glucosyl ester transmembrane transporter activity","type":"exact"}],"termid":"GO:1902417"}


id: PBO:0048127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucosyltransferase 8","termid":"PBO:0048127"}


id: GO:0045114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta 2 integrins, a subfamily of integrins which contain the beta 2 subunit.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin biosynthetic process","termid":"GO:0045112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"beta 2 integrin biosynthetic process","synonyms":[{"name":"beta 2 integrin anabolism","type":"exact"},{"name":"beta 2 integrin biosynthesis","type":"exact"},{"name":"beta 2 integrin formation","type":"exact"},{"name":"beta 2 integrin synthesis","type":"exact"}],"termid":"GO:0045114"}


id: PBO:0077223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane BAX inhibitor motif containing 7, pseudogene","termid":"PBO:0077223"}


id: GO:0032025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cobalt ion (Co2+) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cobalt ion","termid":"GO:0032025"}


id: PBO:0063960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4-phosphate 5-kinase type 1 pseudogene 1","termid":"PBO:0063960"}


id: PBO:0081934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zn regulated GTPase metalloprotein activator 1D, pseudogene","termid":"PBO:0081934"}


id: PBO:0012612
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papulacandin B resistance","termid":"PBO:0012612"}


id: PBO:0056911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MER1 repeat containing imprinted transcript 1","termid":"PBO:0056911"}


id: PBO:0062647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 12 subfamily D member 1 (gene/pseudogene)","termid":"PBO:0062647"}


id: PBO:0001309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF726 family protein","termid":"PBO:0001309"}


id: PBO:0058890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10527","termid":"PBO:0058890"}


id: PATO:0000525
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000525 soil composition sensitivity value (obsolete PATO:0000525)","termid":"PATO:0000525"}


id: RO:0002293
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of ubiquiotously expressed in","direct_ancestors":[{"relation_name":"is_a","term_name":"expresses","termid":"RO:0002292"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitously_expresses","termid":"RO:0002293"}


id: PBO:0086875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative sulfate permease; physically interacts with Hsp82p; green fluorescent protein (GFP)-fusion protein localizes to the ER; YPR003C is not an essential gene","termid":"PBO:0086875"}


id: GO:0009089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lysine, via the intermediate diaminopimelate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysine biosynthetic process","termid":"GO:0009085"},{"relation_name":"is_a","term_name":"diaminopimelate metabolic process","termid":"GO:0046451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006629","GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"lysine biosynthetic process via diaminopimelate","synonyms":[{"name":"diaminopimelate pathway","type":"exact"},{"name":"diaminopimelic acid pathway","type":"exact"},{"name":"lysine anabolism via diaminopimelate","type":"exact"},{"name":"lysine biosynthesis via diaminopimelic acid","type":"exact"},{"name":"lysine biosynthetic process via diaminopimelic acid","type":"exact"},{"name":"lysine formation via diaminopimelate","type":"exact"},{"name":"lysine synthesis via diaminopimelate","type":"exact"}],"termid":"GO:0009089"}


id: PBO:0015663
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by S. cerevisiae CDC16","termid":"PBO:0015663"}


id: PBO:0049669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydratase 1","termid":"PBO:0049669"}


id: PBO:0057125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 208b","termid":"PBO:0057125"}


id: SO:0002360
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for cytosolic rRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA_gene","termid":"SO:0001637"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_rRNA_gene","termid":"SO:0002360"}


id: PBO:0039013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFG3 like matrix AAA peptidase subunit 1, pseudogene","termid":"PBO:0039013"}


id: MOD:02071
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-methionine residue coordinated to one or more metal atoms or metal clusters.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal or metal cluster coordinated L-methionine residue","termid":"MOD:02071"}


id: GO:0048198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which cytosolic coat proteins fit together in a basketlike convex framework to form a coated deformed region on the cytoplasmic surface of the membrane. The deformed region forms into a complete vesicle and is released.","definition_xrefs":["PMID:10219233","ISBN:0716731363","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"Golgi vesicle budding","termid":"GO:0048194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0061024","GO:0006810"],"is_obsolete":false,"name":"Golgi vesicle bud deformation and release","synonyms":[{"name":"Golgi-derived vesicle bud deformation and release","type":"exact"},{"name":"dictyosome vesicle bud deformation","type":"narrow"}],"termid":"GO:0048198"}


id: GO:0004128
data:
  {"annotated_genes":["SJAG_02395","SJAG_02794","SJAG_00235"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76692,88276,112790,114839],"is_not":false,"summary":null,"term":"GO:0004128"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)H + H+ + 2 ferricytochrome b(5) = NAD(P)+ + 2 ferrocytochrome b(5).","definition_xrefs":["EC:1.6.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor","termid":"GO:0016653"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00235":null,"SJAG_02395":null,"SJAG_02794":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"cytochrome-b5 reductase activity, acting on NAD(P)H","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6806831","Reactome:R-HSA-198824","RHEA:46680","MetaCyc:CYTOCHROME-B5-REDUCTASE-RXN"],"synonyms":[{"name":"NADH 5alpha-reductase activity","type":"related"},{"name":"NADH-cytochrome b5 reductase activity","type":"related"},{"name":"NADH-cytochrome-b5 reductase activity","type":"related"},{"name":"NADH-ferricytochrome b5 oxidoreductase activity","type":"related"},{"name":"NADH:ferricytochrome-b5 oxidoreductase activity","type":"related"},{"name":"cytochrome b5 reductase activity","type":"related"},{"name":"dihydronicotinamide adenine dinucleotide-cytochrome b5 reductase activity","type":"related"},{"name":"reduced nicotinamide adeninedinucleotide-cytochrome b5 reductase activity","type":"related"}],"termid":"GO:0004128","terms_by_termid":{"GO:0004128":null}}


id: PBO:0077560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 267","termid":"PBO:0077560"}


id: PBO:0083472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene RPL12A/YEL054C","termid":"PBO:0083472"}


id: GO:0006424
data:
  {"annotated_genes":["SJAG_03071","SJAG_03277"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86385,97513],"is_not":false,"summary":null,"term":"GO:0006424"}]},"cv_name":"biological_process","definition":"The process of coupling glutamate to glutamyl-tRNA, catalyzed by glutamyl-tRNA synthetase. The glutamyl-tRNA synthetase is a class-I synthetase. The activated amino acid is transferred to the 2'-OH group of a glutamic acid-accetping tRNA. The 2'-O-aminoacyl-tRNA will ultimately migrate to the 3' position via transesterification.","definition_xrefs":["GOC:mcc","ISBN:0716730510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03071":null,"SJAG_03277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"glutamyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006424","terms_by_termid":{"GO:0006424":null}}


id: PBO:0113418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein that associates with polysomes; may be involved in regulating mRNA translation; involved in the copper-dependent mineralization of copper sulfide complexes on cell surface in cells cultured in copper salts; role in preventing L-A mycovirus pathogenesis; SLF1 has a paralog, SRO9, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0113418"}


id: PBO:0079285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 4","termid":"PBO:0079285"}


id: PBO:0049424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 1","termid":"PBO:0049424"}


id: POMBASE_GENE_EX_REL:regulates_activity_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_activity_of","termid":"POMBASE_GENE_EX_REL:regulates_activity_of"}


id: GO:0046374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving teichoic acid, any polymer occurring in the cell wall, membrane or capsule of Gram-positive bacteria and containing chains of glycerol phosphate or ribitol phosphate residues.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule metabolic process","termid":"GO:0043170"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"teichoic acid metabolic process","synonyms":[{"name":"teichoic acid metabolism","type":"exact"}],"termid":"GO:0046374"}


id: PBO:0005803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit YmL33 (predicted)","termid":"PBO:0005803"}


id: PBO:0080337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 101 pseudogene","termid":"PBO:0080337"}


id: PBO:0031493
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cortical_patch_assembly","termid":"PBO:0031493"}


id: GO:0001014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of small nucleolar RNA (snoRNA) from a DNA template by RNA polymerase III, originating at a type 2 RNA polymerase III promoter.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription by RNA polymerase III","termid":"GO:0006383"},{"relation_name":"is_a","term_name":"sno(s)RNA transcription","termid":"GO:0009302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016074"}],"interesting_parent_ids":["GO:0016074","GO:0008150","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"snoRNA transcription by RNA polymerase III","synonyms":[{"name":"snoRNA transcription from a type 2 RNA polymerase III promoter","type":"narrow"}],"termid":"GO:0001014"}


id: PBO:0071613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 31","termid":"PBO:0071613"}


id: FYPO:0003518
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of hercynine (N(alpha),N(alpha),N(alpha)-trimethyl-L-histidine) measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular hercynine level during vegetative growth","synonyms":[{"name":"increased cellular N(alpha),N(alpha),N(alpha)-trimethyl-L-histidine level","type":"exact"},{"name":"increased cellular hercynine level during mitotic cell cycle","type":"related"},{"name":"increased cellular trimethyl-histidine level during vegetative growth","type":"exact"},{"name":"increased cellular trimethylhistidine level during vegetative growth","type":"exact"},{"name":"increased hercynine level during vegetative growth","type":"exact"}],"termid":"FYPO:0003518"}


id: GO:0046843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the dorsal filaments, elaborate specializations of the chorion that protrude from the anterior end of the egg and facilitate embryonic respiration.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"egg chorion assembly","termid":"GO:0007306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"dorsal appendage formation","termid":"GO:0046843"}


id: PBO:0074310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD family member 2","termid":"PBO:0074310"}


id: GO:0034955
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,3-dihydroxydiphenyl ether + O2 + H2O = 2-hydroxymuconate + phenol.","definition_xrefs":["UM-BBD_reactionID:r1451"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,3-dihydroxydiphenyl ether dioxygenase activity (obsolete GO:0034955)","termid":"GO:0034955"}


id: PBO:0003367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase Ubp15","termid":"PBO:0003367"}


id: PBO:0056047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LTV1 ribosome biogenesis factor","termid":"PBO:0056047"}


id: PBO:0088013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type II nitroreductase, using NADH as reductant; mutants are defective in fatty acid mediated repression of genes involved in fatty acid biosynthesis indicative of a role in lipid signaling; involved in the oxidative stress response; transcription induction by cadmium and selenite indicates a possible role in the metal stress response; expression induced in cells treated with the mycotoxin patulin","termid":"PBO:0088013"}


id: GO:0006059
data:
  {"annotated_genes":["SJAG_00237"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006062"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving hexitols, any alditol with a chain of six carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alditol metabolic process","termid":"GO:0019400"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"hexitol metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"hexitol metabolism","type":"exact"},{"name":"sugar alcohol (hexitol) metabolic process","type":"exact"},{"name":"sugar alcohol (hexitol) metabolism","type":"exact"}],"termid":"GO:0006059","terms_by_termid":{"GO:0006062":null}}


id: GO:1905550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to endoplasmic reticulum.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22768340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to endoplasmic reticulum","termid":"GO:0070972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to endoplasmic reticulum","synonyms":[{"name":"regulation of protein localisation in endoplasmic reticulum","type":"exact"},{"name":"regulation of protein localization in ER","type":"exact"},{"name":"regulation of protein localization in endoplasmic reticulum","type":"exact"}],"termid":"GO:1905550"}


id: PBO:0029625
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_cellular_response_to_DNA_damage","termid":"PBO:0029625"}


id: FYPO:0002383
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at positions 9 and 14 of histone H3 in regions of the genome that are actively transcribed occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah","PMID:23851719"],"gene_count":0,"genotype_count":0,"name":"obsolete increased histone H3-K9 and H3-K14 acetylation at centromere outer repeat during vegetative growth (obsolete FYPO:0002383)","synonyms":[{"name":"increased histone H3 acetylation (K9 and K14) at centromere outer repeat during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 and H3-K14 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 and H3-K14 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K9 and H3-K14 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 and H3-K14 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"increased histone H3-K9 and H3-K14 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"increased histone H3K9 and H3K14 acetylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0002383"}


id: GO:0003962
data:
  {"annotated_genes":["SJAG_03102"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99663],"is_not":false,"summary":null,"term":"GO:0003962"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: O-succinyl-L-homoserine + L-cysteine = cystathionine + succinate.","definition_xrefs":["EC:2.5.1.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03102":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016765","GO:0003674"],"is_obsolete":false,"name":"cystathionine gamma-synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000505","MetaCyc:CYSPH-RXN","MetaCyc:O-SUCCHOMOSERLYASE-RXN","RHEA:20397"],"synonyms":[{"name":"CTT gamma synthase activity","type":"exact"},{"name":"O-succinyl-L-homoserine (thiol)-lyase activity","type":"exact"},{"name":"O-succinyl-L-homoserine succinate-lyase (adding cysteine) activity","type":"related"},{"name":"O-succinyl-L-homoserine succinate-lyase activity","type":"exact"},{"name":"O-succinylhomoserine (thiol)-lyase activity","type":"related"},{"name":"O-succinylhomoserine synthase activity","type":"related"},{"name":"O-succinylhomoserine synthetase activity","type":"related"},{"name":"O4-succinyl-L-homoserine:L-cysteine S-(3-amino-3-carboxypropyl)transferase activity","type":"related"},{"name":"cystathionine g-synthase activity","type":"exact"},{"name":"cystathionine gamma synthase activity","type":"exact"},{"name":"cystathionine gamma-synthase activity (acts on O-phosphohomoserine)","type":"narrow"},{"name":"cystathionine synthase activity","type":"related"},{"name":"cystathionine synthetase activity","type":"related"},{"name":"homoserine O-transsuccinylase activity","type":"broad"},{"name":"homoserine transsuccinylase activity","type":"broad"}],"termid":"GO:0003962","terms_by_termid":{"GO:0003962":null}}


id: GO:0033197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin E stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to vitamin E","synonyms":[{"name":"response to DL-alpha-tocopherol acetate","type":"narrow"},{"name":"response to DL-alpha-tocopheryl acetate","type":"narrow"},{"name":"response to O-Acetyl-alpha-tocopherol","type":"narrow"}],"termid":"GO:0033197"}


id: PBO:0111834
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jmjN domain","termid":"PBO:0111834"}


id: GO:0033051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving aminophosphonates, phosphonic acid derivatives that contain an amino group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aminophosphonate metabolic process","secondary_identifiers":["KEGG_PATHWAY:map00440"],"synonyms":[{"name":"aminophosphonate metabolism","type":"exact"}],"termid":"GO:0033051"}


id: PBO:0052237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 9 pseudogene 5","termid":"PBO:0052237"}


id: PBO:0052283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 8","termid":"PBO:0052283"}


id: PBO:0032753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptide N-glycanase Ngl1","termid":"PBO:0032753"}


id: PR:O94727
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- frp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferric/cupric reductase transmembrane component 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.05c","synonyms":[{"name":"Spom972h-frp2","type":"exact"},{"name":"ferric-chelate reductase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94727"}


id: PBO:0081437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 286B (pseudogene)","termid":"PBO:0081437"}


id: PBO:0079013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-SeC (anticodon TCA) 1-1","termid":"PBO:0079013"}


id: PBO:0072814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha motif domain containing 9 like","termid":"PBO:0072814"}


id: GO:0075530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a virus establishes a latent state within its host as an episome, where the viral genome remains silent in the cytoplasm or nucleus as linear structure.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of episomal latency","termid":"GO:0075720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of latency as a linear episome","synonyms":[{"name":"establishment of latency as a linear plasmid","type":"exact"},{"name":"establishment of linear plasmid latency","type":"exact"}],"termid":"GO:0075530"}


id: PBO:0071945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 22","termid":"PBO:0071945"}


id: GO:0061827
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of the late spermatid or spermatozoon that contains the nucleus and acrosome.","definition_xrefs":["PMID:22797892","PMID:24665388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sperm head","termid":"GO:0061827"}


id: PR:Q10411
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spo15 gene.","definition_xrefs":["UniProtKB:Q10411","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation-specific protein 15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.06c","synonyms":[{"name":"Spom972h-spo15","type":"exact"}],"termid":"PR:Q10411"}


id: GO:0140849
data:
  {"annotated_genes":["SJAG_02571","SJAG_02798"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84056,94303],"is_not":false,"summary":null,"term":"GO:0140849"}]},"cv_name":"molecular_function","definition":"A histone chaperone that mediates the exchange of histone H2A-H2B dimer and histone H2AZ-H2B dimers in a nucleosome, driven by ATP hydrolysis. Some chaperones insert H2AZ-H2B dimers and remove H2A-H2B, while others do the opposite.","definition_xrefs":["PMID:30309918","PMID:21241891","PMID:23580526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent histone chaperone activity","termid":"GO:0140674"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02571":null,"SJAG_02798":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140597"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0140097","GO:0003674","GO:0140104","GO:0003824","GO:0140597"],"is_obsolete":false,"name":"ATP-dependent H2AZ histone chaperone activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATP-dependent H2A.Z histone chaperone activity","type":"exact"},{"name":"H2AZ histone exchange activity","type":"related"}],"termid":"GO:0140849","terms_by_termid":{"GO:0140849":null}}


id: PBO:0061691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 210","termid":"PBO:0061691"}


id: RO:0002090
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"precedes","termid":"BFO:0000063"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immediately_precedes","termid":"RO:0002090"}


id: PBO:0069308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 564, pseudogene","termid":"PBO:0069308"}


id: GO:0031391
data:
  {"annotated_genes":["SJAG_04150","SJAG_00729","SJAG_00272","SJAG_01010","SJAG_02182"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85637,90017,91324,108331,108884],"is_not":false,"summary":null,"term":"GO:0031391"}]},"cv_name":"cellular_component","definition":"A pentameric replication factor C (RLC) complex, which unloads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) from chromatin and has roles in telomere length regulation and other aspects of genome stability. In Saccharomyces the subunits are known as Elg1p, Rfc2p, Rfc3p, Rfc4p, and Rfc5p.","definition_xrefs":["PMID:27664980","PMID:23499004","PMID:14614842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"chromosome","termid":"GO:0005694"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00272":null,"SJAG_00729":null,"SJAG_01010":null,"SJAG_02182":null,"SJAG_04150":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"Elg1 RFC-like complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Elg1-RFC","type":"exact"},{"name":"Elg1-RLC","type":"exact"},{"name":"RFC (Elg1)","type":"exact"}],"termid":"GO:0031391","terms_by_termid":{"GO:0031391":null}}


id: PBO:0049194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor delta type subunit 1","termid":"PBO:0049194"}


id: PBO:0045128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DMXL1 divergent transcript","termid":"PBO:0045128"}


id: GO:0140296
data:
  {"annotated_genes":["SJAG_03007","SJAG_03095","SJAG_00650","SJAG_00095","SJAG_00159","SJAG_00202","SJAG_00692","SJAG_03900","SJAG_03120","SJAG_01523","SJAG_02174","SJAG_02458"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001179"},{"annotations":[69680,65693,57812,75744,76104,71009,69797,74752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017025"},{"annotations":[77947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001096"},{"annotations":[75150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001097"},{"annotations":[70851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001156"}]},"cv_name":"molecular_function","definition":"Binding to a general transcription initiation factor, a protein that contributes to transcription start site selection and transcription initiation.","definition_xrefs":["GOC:txnOH-2018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor binding","termid":"GO:0008134"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00095":null,"SJAG_00159":null,"SJAG_00202":null,"SJAG_00650":null,"SJAG_00692":null,"SJAG_01523":null,"SJAG_02174":null,"SJAG_02458":null,"SJAG_03007":null,"SJAG_03095":null,"SJAG_03120":null,"SJAG_03900":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"general transcription initiation factor binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0140296","terms_by_termid":{"GO:0001096":null,"GO:0001097":null,"GO:0001156":null,"GO:0001179":null,"GO:0017025":null}}


id: PBO:0038301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rnacentral_identifier","termid":"PBO:0038301"}


id: PBO:0088850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi protein, associated with COP vesicles (predicted), DUF5427","termid":"PBO:0088850"}


id: PBO:0085166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Octanoyl-CoA:ethanol acyltransferase; also functions as thioesterase; plays a minor role in medium-chain fatty acid ethyl ester biosynthesis; localizes to lipid particles and the mitochondrial outer membrane; EHT1 has a paralog, EEB1, that arose from the whole genome duplication","termid":"PBO:0085166"}


id: GO:0021548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pons over time, from its formation to the mature structure. The pons lies above the medulla and next to the cerebellum. The pons conveys information about movement from the cerebral hemisphere to the cerebellum.","definition_xrefs":["ISBN:0838580343","GOC:cls","GO_REF:0000021","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"metencephalon development","termid":"GO:0022037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pons development","termid":"GO:0021548"}


id: PATO:0002504
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed posterodorsally.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posterodorsal orientation","synonyms":[{"name":"posterodorsally directed","type":"exact"}],"termid":"PATO:0002504"}


id: PBO:0110811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-fungal binuclear cluster type, meiosis-specific copper activator, Mca1","termid":"PBO:0110811"}


id: GO:0140299
data:
  {"annotated_genes":["SJAG_02187","SJAG_00757","SJAG_01807","SJAG_02657","SJAG_03903","SJAG_00027","SJAG_00331","SJAG_00642","SJAG_01419","SJAG_06622","SJAG_02708","SJAG_02945","SJAG_02853","SJAG_00792","SJAG_02267","SJAG_01620","SJAG_03405","SJAG_02226","SJAG_01410","SJAG_02748","SJAG_06621","SJAG_03828","SJAG_02135","SJAG_02183","SJAG_01587","SJAG_03715"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112518,84666,92989,96612,95131,96644,88727,102116,87812,100628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140664"},{"annotations":[108923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140786"},{"annotations":[90125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140482"},{"annotations":[105019,105021,107777,105024,105020,105023,105022,105025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019826"},{"annotations":[91319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140442"},{"annotations":[115041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140550"},{"annotations":[87211,91320,114345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000155"},{"annotations":[110969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032935"},{"annotations":[99501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106219"}]},"cv_name":"molecular_function","definition":"Binding to a small molecule and eliciting a change in the protein's activity in response to the intracellular level of that small molecule.","definition_xrefs":["PMID:26328879"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00331":null,"SJAG_00642":null,"SJAG_00757":null,"SJAG_00792":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01587":null,"SJAG_01620":null,"SJAG_01807":null,"SJAG_02135":null,"SJAG_02183":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02267":null,"SJAG_02657":null,"SJAG_02708":null,"SJAG_02748":null,"SJAG_02853":null,"SJAG_02945":null,"SJAG_03405":null,"SJAG_03715":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"small molecule sensor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"small molecular sensor activity","type":"exact"},{"name":"small molecule sensing activity","type":"exact"}],"termid":"GO:0140299","terms_by_termid":{"GO:0000155":null,"GO:0019826":null,"GO:0032935":null,"GO:0106219":null,"GO:0140442":null,"GO:0140482":null,"GO:0140550":null,"GO:0140664":null,"GO:0140786":null}}


id: PBO:0041780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell cycle associated protein 1","termid":"PBO:0041780"}


id: GO:1903039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of leukocyte cell-cell adhesion.","definition_xrefs":["GOC:rl","GOC:TermGenie","PMID:21106532","GO_REF:0000058","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-cell adhesion","termid":"GO:0022409"},{"relation_name":"is_a","term_name":"regulation of leukocyte cell-cell adhesion","termid":"GO:1903037"},{"relation_name":"positively_regulates","term_name":"leukocyte cell-cell adhesion","termid":"GO:0007159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of leukocyte cell-cell adhesion","synonyms":[{"name":"activation of leukocyte adhesion","type":"narrow"},{"name":"activation of leukocyte cell adhesion","type":"narrow"},{"name":"activation of leukocyte cell-cell adhesion","type":"narrow"},{"name":"positive regulation of leukocyte adhesion","type":"exact"},{"name":"positive regulation of leukocyte cell adhesion","type":"exact"},{"name":"up regulation of leukocyte adhesion","type":"exact"},{"name":"up regulation of leukocyte cell adhesion","type":"exact"},{"name":"up regulation of leukocyte cell-cell adhesion","type":"exact"},{"name":"up-regulation of leukocyte adhesion","type":"exact"},{"name":"up-regulation of leukocyte cell adhesion","type":"exact"},{"name":"up-regulation of leukocyte cell-cell adhesion","type":"exact"},{"name":"upregulation of leukocyte adhesion","type":"exact"},{"name":"upregulation of leukocyte cell adhesion","type":"exact"},{"name":"upregulation of leukocyte cell-cell adhesion","type":"exact"}],"termid":"GO:1903039"}


id: PBO:0091325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial electron transfer flavoprotein-ubiquinone oxidoreductase Cir2","termid":"PBO:0091325"}


id: PBO:0050288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNF1A antisense RNA 1","termid":"PBO:0050288"}


id: PBO:0047190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 207 member C, pseudogene","termid":"PBO:0047190"}


id: PBO:0058538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6083","termid":"PBO:0058538"}


id: PBO:0089496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex linker, pericentrin/kendrin Pcp1","termid":"PBO:0089496"}


id: PBO:0030478
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_glutamine_level","termid":"PBO:0030478"}


id: GO:0070223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A sulfide oxidation process that proceeds via the reaction catalyzed by sulfur dioxygenase.","definition_xrefs":["MetaCyc:PWY-5285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfide oxidation","termid":"GO:0019418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"sulfide oxidation, using sulfur dioxygenase","synonyms":[{"name":"sulphide oxidation, using sulfur dioxygenase","type":"exact"}],"termid":"GO:0070223"}


id: PBO:0051529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 2 receptor subunit alpha","termid":"PBO:0051529"}


id: PBO:0000445
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.6","termid":"PBO:0000445"}


id: GO:0005052
data:
  {"annotated_genes":["SJAG_00702"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107914],"is_not":false,"summary":null,"term":"GO:0005052"}]},"cv_name":"molecular_function","definition":"Binding to a type 1 peroxisome targeting signal, a tripeptide with the consensus sequence (S/A/C)-(K/R/H)-L.","definition_xrefs":["GOC:mah","PMID:11687502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome targeting sequence binding","termid":"GO:0000268"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00702":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005048"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005048"],"is_obsolete":false,"name":"peroxisome matrix targeting signal-1 binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PEX5","type":"narrow"},{"name":"PTS1 binding","type":"exact"},{"name":"PTS1 receptor","type":"narrow"},{"name":"peroxisomal targeting signal 1 (PTS1) binding","type":"exact"},{"name":"peroxisome targeting signal-1 binding","type":"exact"},{"name":"peroxisome targeting signal-1 receptor","type":"narrow"}],"termid":"GO:0005052","terms_by_termid":{"GO:0005052":null}}


id: GO:0010476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of gibberellin stimulus.","definition_xrefs":["PMID:17521411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"part_of","term_name":"cellular response to gibberellin stimulus","termid":"GO:0071370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"gibberellin mediated signaling pathway","synonyms":[{"name":"gibberellin-mediated signalling","type":"exact"}],"termid":"GO:0010476"}


id: PBO:0072904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory carrier membrane protein 2","termid":"PBO:0072904"}


id: PR:P41391
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ran GTPase-activating protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ran GTPase-activating protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.07","secondary_identifiers":["UniProtKB:P41391"],"synonyms":[{"name":"Spom972h-RANGAP1","type":"exact"},{"name":"protein rna1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P41391"}


id: GO:0019498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the conversion of n-octane to octanoyl-CoA.","definition_xrefs":["MetaCyc:P221-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"n-octane metabolic process","termid":"GO:0018939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"n-octane oxidation","termid":"GO:0019498"}


id: PBO:0047550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 8","termid":"PBO:0047550"}


id: PBO:0038996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AE binding protein 2","termid":"PBO:0038996"}


id: PBO:0091441
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not appear to be the ortholog of S. cerevisiae CYB2, missing the N-term cytochrome B2 domain","termid":"PBO:0091441"}


id: PBO:0079086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 3-1","termid":"PBO:0079086"}


id: GO:1900937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nonadec-1-ene biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of olefin biosynthetic process","termid":"GO:1900913"},{"relation_name":"is_a","term_name":"positive regulation of nonadec-1-ene metabolic process","termid":"GO:1900934"},{"relation_name":"is_a","term_name":"regulation of nonadec-1-ene biosynthetic process","termid":"GO:1900935"},{"relation_name":"positively_regulates","term_name":"nonadec-1-ene biosynthetic process","termid":"GO:1900877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nonadec-1-ene biosynthetic process","synonyms":[{"name":"upregulation of nonadec-1-ene formation","type":"exact"},{"name":"activation of nonadec-1-ene anabolism","type":"exact"},{"name":"activation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"activation of nonadec-1-ene biosynthetic process","type":"narrow"},{"name":"activation of nonadec-1-ene formation","type":"exact"},{"name":"activation of nonadec-1-ene synthesis","type":"exact"},{"name":"positive regulation of nonadec-1-ene anabolism","type":"exact"},{"name":"positive regulation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"positive regulation of nonadec-1-ene formation","type":"exact"},{"name":"positive regulation of nonadec-1-ene synthesis","type":"exact"},{"name":"up regulation of nonadec-1-ene anabolism","type":"exact"},{"name":"up regulation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"up regulation of nonadec-1-ene biosynthetic process","type":"exact"},{"name":"up regulation of nonadec-1-ene formation","type":"exact"},{"name":"up regulation of nonadec-1-ene synthesis","type":"exact"},{"name":"up-regulation of nonadec-1-ene anabolism","type":"exact"},{"name":"up-regulation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"up-regulation of nonadec-1-ene biosynthetic process","type":"exact"},{"name":"up-regulation of nonadec-1-ene formation","type":"exact"},{"name":"up-regulation of nonadec-1-ene synthesis","type":"exact"},{"name":"upregulation of nonadec-1-ene anabolism","type":"exact"},{"name":"upregulation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"upregulation of nonadec-1-ene biosynthetic process","type":"exact"},{"name":"upregulation of nonadec-1-ene synthesis","type":"exact"}],"termid":"GO:1900937"}


id: PBO:0050811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HUS1 checkpoint clamp component B","termid":"PBO:0050811"}


id: PATO:0001634
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single physical entity inhering in a bearer by virtue of whether the bearer is essential or indispensable.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functionality","termid":"PATO:0001509"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necessity (continuant)","termid":"PATO:0001634"}


id: PBO:0005672
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.5.1.3","termid":"PBO:0005672"}


id: PBO:0002208
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.5.2","termid":"PBO:0002208"}


id: PBO:0108561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mmi1 and Mei2-associated RNA","termid":"PBO:0108561"}


id: PBO:0018106
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae RAD7","termid":"PBO:0018106"}


id: PBO:0080271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 34 pseudogene","termid":"PBO:0080271"}


id: GO:1902775
data:
  {"annotated_genes":["SJAG_03773"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104435],"is_not":false,"summary":null,"term":"GO:1902775"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a mitochondrial large ribosomal subunit.","definition_xrefs":["PMID:24206665","GO_REF:0000079","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosomal large subunit assembly","termid":"GO:0000027"},{"relation_name":"part_of","term_name":"mitochondrial ribosome assembly","termid":"GO:0061668"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03773":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150","GO:0042254"],"is_obsolete":false,"name":"mitochondrial large ribosomal subunit assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"39S ribosomal subunit, mitochondrial assembly","type":"narrow"},{"name":"39S ribosomal subunit, mitochondrial formation","type":"narrow"},{"name":"mitochondrial large ribosomal subunit formation","type":"exact"}],"termid":"GO:1902775","terms_by_termid":{"GO:1902775":null}}


id: PBO:0028212
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-signal_transduction_phenotype","termid":"PBO:0028212"}


id: PR:Q10201
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- npg1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17D1.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D1.07c","synonyms":[{"name":"Spom972h-npg1","type":"exact"}],"termid":"PR:Q10201"}


id: PBO:0064817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 10","termid":"PBO:0064817"}


id: GO:0071088
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha5-beta1 integrin complex bound to tissue transglutaminase.","definition_xrefs":["PMID:10684262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alpha5-beta1 integrin-tissue transglutaminase complex","synonyms":[{"name":"ITGA5-ITGB1-TGM2 complex","type":"narrow"}],"termid":"GO:0071088"}


id: PBO:0045468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dopamine receptor D5","termid":"PBO:0045468"}


id: PBO:0005141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Psk1","termid":"PBO:0005141"}


id: GO:0021706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the locus ceruleus to attain its fully functional state. The locus ceruleus is a dense cluster of neurons within the dorsorostral pons. This nucleus is the major location of neurons that release norepinephrine throughout the brain, and is responsible for physiological responses to stress and panic.","definition_xrefs":["GOC:jid","ISBN:0838580343","GOC:cls","GO_REF:0000021","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"pons maturation","termid":"GO:0021586"},{"relation_name":"part_of","term_name":"locus ceruleus development","termid":"GO:0021703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"locus ceruleus maturation","termid":"GO:0021706"}


id: GO:0050202
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-(4-hydroxyphenyl)-2-aminoethanol = (4-hydroxyphenyl)acetaldehyde + NH4.","definition_xrefs":["EC:4.2.1.87","RHEA:18173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"octopamine dehydratase activity","secondary_identifiers":["KEGG_REACTION:R03358","MetaCyc:OCTOPAMINE-DEHYDRATASE-RXN"],"synonyms":[{"name":"octopamine hydro-lyase (deaminating)","type":"related"},{"name":"octopamine hydro-lyase [deaminating; (4-hydroxyphenyl)acetaldehyde-forming]","type":"related"},{"name":"octopamine hydrolyase activity","type":"related"}],"termid":"GO:0050202"}


id: GO:0140532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of osmosensory signaling MAPK cascade.","definition_xrefs":["PMID:31911490"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of osmosensory signaling MAPK cascade (obsolete GO:0140532)","termid":"GO:0140532"}


id: PBO:0078658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 11-1","termid":"PBO:0078658"}


id: PBO:0004825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C (predicted)","termid":"PBO:0004825"}


id: GO:0140393
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1'S)-averantin + NADP+ = norsolorinic acid + NADPH.","definition_xrefs":["PMID:10584035","PMID:8368836","RHEA:35447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketoreductase activity","termid":"GO:0045703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"norsolorinic acid ketoreductase activity","secondary_identifiers":["KEGG_REACTION:R10309","MetaCyc:RXN-9480","EC:1.1.1.349"],"termid":"GO:0140393"}


id: PBO:0074435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 35","termid":"PBO:0074435"}


id: GO:1905664
data:
  {"annotated_genes":["SJAG_04551","SJAG_03631","SJAG_00296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109424,87269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[98208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcium ion import across plasma membrane.","definition_xrefs":["GOC:TermGenie","GOC:bhm","GO_REF:0000058","PMID:17640527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion import","termid":"GO:0090279"},{"relation_name":"is_a","term_name":"regulation of calcium ion transmembrane transport","termid":"GO:1903169"},{"relation_name":"regulates","term_name":"calcium ion import across plasma membrane","termid":"GO:0098703"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of calcium ion import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905664","terms_by_termid":{"GO:1905665":null,"GO:1905949":null}}


id: GO:0014888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which striated muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. These adaptive events occur in both muscle fibers and associated structures (motoneurons and capillaries), and they involve alterations in regulatory mechanisms, contractile properties and metabolic capacities.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle adaptation","termid":"GO:0043500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striated muscle adaptation","synonyms":[{"name":"striated muscle plasticity","type":"related"}],"termid":"GO:0014888"}


id: PBO:0111887
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"huamn GCFC2 ortholog","termid":"PBO:0111887"}


id: GO:0033364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a secretory granule in a mast cell. A secretory granule is a small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule organization","termid":"GO:0033363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mast cell secretory granule organization","synonyms":[{"name":"mast cell secretory granule maturation","type":"related"},{"name":"mast cell secretory granule organisation","type":"exact"},{"name":"mast cell secretory granule organization and biogenesis","type":"related"}],"termid":"GO:0033364"}


id: PBO:0042425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 27 pseudogene 9","termid":"PBO:0042425"}


id: PBO:0029413
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_mitotic_G2/M_transition","termid":"PBO:0029413"}


id: PBO:0014264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial FUN14 family protein","termid":"PBO:0014264"}


id: GO:0004905
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a type I interferon and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. Type I interferons include the interferon-alpha, beta, delta, epsilon, zeta, kappa, tau, and omega gene families.","definition_xrefs":["PMID:15546383","PMID:16681834","ISBN:0126896631","GOC:signaling","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interferon receptor activity","termid":"GO:0004904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"type I interferon receptor activity","synonyms":[{"name":"interferon-alpha receptor activity","type":"narrow"},{"name":"interferon-alpha/beta receptor activity","type":"narrow"},{"name":"interferon-beta receptor activity","type":"narrow"},{"name":"interferon-delta receptor activity","type":"narrow"},{"name":"interferon-epsilon receptor activity","type":"narrow"},{"name":"interferon-kappa receptor activity","type":"narrow"},{"name":"interferon-omega receptor activity","type":"narrow"},{"name":"interferon-tau receptor activity","type":"narrow"},{"name":"interferon-zeta receptor activity","type":"narrow"},{"name":"type I IFN receptor activity","type":"exact"}],"termid":"GO:0004905"}


id: PBO:0031607
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_M_phase_progression","termid":"PBO:0031607"}


id: PBO:0030878
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_vegetative_cell_population_growth","termid":"PBO:0030878"}


id: PBO:0048826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 11","termid":"PBO:0048826"}


id: PBO:0065525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patched 2","termid":"PBO:0065525"}


id: GO:0007283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process by which male germ line stem cells self renew or give rise to successive cell types resulting in the development of a spermatozoa.","definition_xrefs":["PMID:30990821","ISBN:9780878933846","PMID:28073824","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"male gamete generation","termid":"GO:0048232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermatogenesis","secondary_identifiers":["Wikipedia:Spermatogenesis"],"synonyms":[{"name":"generation of spermatozoa","type":"exact"}],"termid":"GO:0007283"}


id: GO:1990579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation of a peptidyl-serine to form peptidyl-O-phospho-L-serine on an identical protein. For example, phosphorylation by the other kinase within a homodimer.","definition_xrefs":["PMID:21317875","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-serine autophosphorylation","termid":"GO:0036289"},{"relation_name":"is_a","term_name":"protein trans-autophosphorylation","termid":"GO:0036290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-serine trans-autophosphorylation","synonyms":[{"name":"serine autophosphorylation in trans","type":"exact"},{"name":"serine transautophosphorylation","type":"exact"}],"termid":"GO:1990579"}


id: PBO:0029918
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_lanosterol_level","termid":"PBO:0029918"}


id: PBO:0050993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 122","termid":"PBO:0050993"}


id: GO:0010573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of vascular endothelial growth factor production due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"vascular endothelial growth factor production","synonyms":[{"name":"VEGF production","type":"exact"}],"termid":"GO:0010573"}


id: GO:0034605
data:
  {"annotated_genes":["SJAG_01186","SJAG_02266","SJAG_04388","SJAG_04082","SJAG_00436","SJAG_01584","SJAG_03319","SJAG_03815","SJAG_02426","SJAG_04567","SJAG_03527","SJAG_02381","SJAG_04055","SJAG_03949","SJAG_04187"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84907,86868,88133,91755,92543,96593,101037,101323,106052,106053,111565,111566],"is_not":false,"summary":null,"term":"GO:0034605"},{"annotations":[100271,100381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070370"},{"annotations":[112492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to heat","termid":"GO:0009408"},{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00436":null,"SJAG_01186":null,"SJAG_01584":null,"SJAG_02266":null,"SJAG_02381":null,"SJAG_02426":null,"SJAG_03319":null,"SJAG_03527":null,"SJAG_03815":null,"SJAG_03949":null,"SJAG_04055":null,"SJAG_04082":null,"SJAG_04187":null,"SJAG_04388":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to heat","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular response to heat stress","type":"exact"}],"termid":"GO:0034605","terms_by_termid":{"GO:0031990":null,"GO:0034605":null,"GO:0070370":null}}


id: PR:Q10086
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- toe4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C11D3.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.07c","synonyms":[{"name":"Spom972h-toe4","type":"exact"}],"termid":"PR:Q10086"}


id: PBO:0046674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESX homeobox 1","termid":"PBO:0046674"}


id: GO:1990066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which excess light energy absorbed by chlorophyll and not used to drive photosynthesis is emitted by nonphotochemical quenching or chlorophyll fluorescence.","definition_xrefs":["PMID:10938857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light stimulus","termid":"GO:0009416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"energy quenching","termid":"GO:1990066"}


id: GO:0042897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of polymyxin, any of a group of related antibiotics produced by Bacillus polymyxa and active against most Gram-negative bacteria, from one side of a membrane to the other.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"lipid transmembrane transporter activity","termid":"GO:0170055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"polymyxin transmembrane transporter activity","synonyms":[{"name":"polymyxin transporter activity","type":"related"}],"termid":"GO:0042897"}


id: PBO:0045015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIP2C antisense RNA 1","termid":"PBO:0045015"}


id: SO:0001776
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant in the genetic material inherited from the father.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_origin","termid":"SO:0001762"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paternal_variant","synonyms":[{"name":"paternal variant","type":"exact"}],"termid":"SO:0001776"}


id: PR:O13620
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein 19 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02862","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple RNA-binding domain-containing protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP22H7.02c","secondary_identifiers":["UniProtKB:O13620"],"synonyms":[{"name":"Spom972h-RBM19","type":"exact"}],"termid":"PR:O13620"}


id: PBO:0066253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMX2 pseudogene 1","termid":"PBO:0066253"}


id: PBO:0046533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERRFI1 divergent transcript","termid":"PBO:0046533"}


id: PBO:0041203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blood vessel epicardial substance","termid":"PBO:0041203"}


id: CHEBI:46245
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q10","termid":"CHEBI:46245"}


id: PBO:0012278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EST1 family nonsense-mediated mRNA decay (NMD) pathway protein Ebs1 (predicted)","termid":"PBO:0012278"}


id: PBO:0087878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional regulator; partially nonfunctional in S288C strains but has a major role in catabolite repression and ethanol response in some other strains; involved in response to toxic agents; phosphorylation by Snf1p or the Mec1p pathway inactivates Mig3p, allowing induction of damage response genes","termid":"PBO:0087878"}


id: GO:2000932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellobiose metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of cellobiose metabolic process","termid":"GO:2000930"},{"relation_name":"positively_regulates","term_name":"cellobiose metabolic process","termid":"GO:2000891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of cellobiose metabolic process","synonyms":[{"name":"positive regulation of cellobiose metabolism","type":"exact"}],"termid":"GO:2000932"}


id: GO:0005840
data:
  {"annotated_genes":["SJAG_03584","SJAG_04998","SJAG_04342","SJAG_02894","SJAG_00148","SJAG_01478","SJAG_04173","SJAG_04168","SJAG_04204","SJAG_03192","SJAG_04695","SJAG_02046","SJAG_01364","SJAG_04160","SJAG_06612","SJAG_01413","SJAG_02312","SJAG_03040","SJAG_02682","SJAG_03176","SJAG_04918","SJAG_03284","SJAG_02335","SJAG_00748","SJAG_02280","SJAG_02531","SJAG_01087","SJAG_01194","SJAG_00544","SJAG_04176","SJAG_03122","SJAG_04534","SJAG_01580","SJAG_03326","SJAG_00166","SJAG_02840","SJAG_01548","SJAG_04029","SJAG_03424","SJAG_04019","SJAG_03402","SJAG_05270","SJAG_03666","SJAG_02762","SJAG_02359","SJAG_02871","SJAG_00523","SJAG_00782","SJAG_00749","SJAG_03922","SJAG_01719","SJAG_00889","SJAG_04281","SJAG_01734","SJAG_02870","SJAG_02802","SJAG_01303","SJAG_01520","SJAG_02207","SJAG_04490","SJAG_02121","SJAG_02479","SJAG_01727","SJAG_00799","SJAG_02755","SJAG_03423","SJAG_01296","SJAG_06253","SJAG_04753","SJAG_00726","SJAG_00465","SJAG_03788","SJAG_01512","SJAG_02522","SJAG_04663","SJAG_04689","SJAG_04188","SJAG_04020","SJAG_03133","SJAG_00034","SJAG_03859","SJAG_04476","SJAG_04207","SJAG_03422","SJAG_04164","SJAG_01045","SJAG_02611","SJAG_04066","SJAG_04324","SJAG_01551","SJAG_04256","SJAG_00497","SJAG_02067","SJAG_00628","SJAG_00503","SJAG_04216","SJAG_01609","SJAG_02224","SJAG_07009","SJAG_02020","SJAG_02033","SJAG_02253","SJAG_03043","SJAG_03383","SJAG_02861","SJAG_00060","SJAG_03127","SJAG_00629","SJAG_02184","SJAG_00220","SJAG_00069","SJAG_04414","SJAG_00921","SJAG_03335","SJAG_01322","SJAG_04494","SJAG_02324","SJAG_01468","SJAG_04378","SJAG_03053","SJAG_02585","SJAG_04478","SJAG_00940","SJAG_04893","SJAG_02510","SJAG_03364","SJAG_03065","SJAG_00537","SJAG_00513","SJAG_02243","SJAG_01676","SJAG_01132","SJAG_07014","SJAG_00541","SJAG_02477","SJAG_00733","SJAG_07013","SJAG_01287","SJAG_03762","SJAG_01630","SJAG_03459","SJAG_02777","SJAG_01767","SJAG_02904","SJAG_02836","SJAG_04244","SJAG_00315","SJAG_03971","SJAG_02891","SJAG_04897","SJAG_01202","SJAG_05216","SJAG_01411","SJAG_03254","SJAG_04174","SJAG_04847","SJAG_03034","SJAG_01366","SJAG_00086","SJAG_00384","SJAG_03568","SJAG_04304","SJAG_03197","SJAG_01721","SJAG_03159","SJAG_01226","SJAG_03262","SJAG_02340","SJAG_02803","SJAG_01591","SJAG_03919","SJAG_01588","SJAG_04814","SJAG_04746","SJAG_05244","SJAG_00844","SJAG_03636","SJAG_01463","SJAG_03649","SJAG_00765","SJAG_02283","SJAG_05221","SJAG_05248","SJAG_02546","SJAG_00155","SJAG_04493","SJAG_03425","SJAG_03297","SJAG_01473","SJAG_02071","SJAG_04889","SJAG_02452","SJAG_04788","SJAG_05320","SJAG_02890","SJAG_02081","SJAG_04475","SJAG_01853","SJAG_02201","SJAG_00468","SJAG_01608","SJAG_01128","SJAG_01565","SJAG_01387","SJAG_01632","SJAG_04672","SJAG_06110","SJAG_01568","SJAG_01365","SJAG_02749","SJAG_01829","SJAG_05573","SJAG_02597","SJAG_02535","SJAG_05218","SJAG_02643","SJAG_04626","SJAG_00944","SJAG_00860","SJAG_00105"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[108257,98543,114332,108077,97375,89667,106790,95931,114965,87076,93143,108383,104243,101470,103138,111239,88524,84165,93236,100163,97418,87075,84166,111418,96843,104244,92255,101767,113499,87074,93504,83748,97955,105582,83747,107163,108382,97264,113721,93522,95141,108256,109572,108076,108177,96486,85669,92256,89629,84167,104265,113500,108445,111240,87100,90936,90935,89628,104671,109978,114022,94269,93538,106338,113722,113663,111784,87101,98526,113664,110587,95142,110586,104040,105881,112846,86298,86161,98544,92893,114853,94270,109573,104672,93503,108176,89666,96963,108000,93523,84250,93228,85438,95932,97727,103924,104374,107094,114852,86162,88525,98527,104232,106337,97417,103137,107093,108444,97728,110084,110540,104264,110085,115023,95227,114966,100164,95228,110539,84148,93539,90962,96487,96844,86297,97374,104373,107162,107687,101598,115024,92892,97954,101471,112959,113712,114331,111419,105882,105583,112645,90961,100845,101766,93237,107686,112847,112958,109557,106789,113837,112646,109977],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0022625"},{"annotations":[103947,106088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0022626"},{"annotations":[107667,102848,84994,107467,95713,101723,103964,95215,100305,86617,96101,96523,94695,101607,101722,97606,90964,92629,99918,101711,107666,89061,110611,84711,99874,101446,89727,108394,97607,108395,114766,97782,110612,96834,107668,89573,102129,106669,112368,91735,100490,87061,112505,84710,99924,109488,107466,92493,91736,95712,96833,87062,102100,84745,94694,94721,96102,97780,90811,86616,94397,100306,101473,113486,83734,95852,83733,92494,102751,101472,87648,90615,89060,73721,97781,89574,95851,102847,101710,109167,106032,90963,94722,109487,87416,92405,89729,110260,112367,93474,113480,109168,101445,84993,109489,84746,93473,103963,90614,89728,102099,92406,110261,94396,102752,95216,95410],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0022627"},{"annotations":[94044,105890,108283,110655,112226,94709,106832,110375,104280,108520,113184,104233,113985,85088,94023,101748,92658,97989,107157,104133,100423,112336,110774,99393,98676,101896,92285,102801,109510,111436,111483,99751,95157,97151,92324,100908,108954,87515,99502,108779,111303,113072,84421,92962,85541],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005762"},{"annotations":[90250,103993,98372,91405,94048,100068,106433,91985,104639,104137,105406,99421,94281,90535,111656,85997,106723,99142,102074,102439,112081,114138,92692,99999,104392,106186,108420,88125,94047,89707,85944,90548],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005763"}]},"cv_name":"cellular_component","definition":"An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"}],"gene_count":220,"genes_by_uniquename":{"SJAG_00034":null,"SJAG_00060":null,"SJAG_00069":null,"SJAG_00086":null,"SJAG_00105":null,"SJAG_00148":null,"SJAG_00155":null,"SJAG_00166":null,"SJAG_00220":null,"SJAG_00315":null,"SJAG_00384":null,"SJAG_00465":null,"SJAG_00468":null,"SJAG_00497":null,"SJAG_00503":null,"SJAG_00513":null,"SJAG_00523":null,"SJAG_00537":null,"SJAG_00541":null,"SJAG_00544":null,"SJAG_00628":null,"SJAG_00629":null,"SJAG_00726":null,"SJAG_00733":null,"SJAG_00748":null,"SJAG_00749":null,"SJAG_00765":null,"SJAG_00782":null,"SJAG_00799":null,"SJAG_00844":null,"SJAG_00860":null,"SJAG_00889":null,"SJAG_00921":null,"SJAG_00940":null,"SJAG_00944":null,"SJAG_01045":null,"SJAG_01087":null,"SJAG_01128":null,"SJAG_01132":null,"SJAG_01194":null,"SJAG_01202":null,"SJAG_01226":null,"SJAG_01287":null,"SJAG_01296":null,"SJAG_01303":null,"SJAG_01322":null,"SJAG_01364":null,"SJAG_01365":null,"SJAG_01366":null,"SJAG_01387":null,"SJAG_01411":null,"SJAG_01413":null,"SJAG_01463":null,"SJAG_01468":null,"SJAG_01473":null,"SJAG_01478":null,"SJAG_01512":null,"SJAG_01520":null,"SJAG_01548":null,"SJAG_01551":null,"SJAG_01565":null,"SJAG_01568":null,"SJAG_01580":null,"SJAG_01588":null,"SJAG_01591":null,"SJAG_01608":null,"SJAG_01609":null,"SJAG_01630":null,"SJAG_01632":null,"SJAG_01676":null,"SJAG_01719":null,"SJAG_01721":null,"SJAG_01727":null,"SJAG_01734":null,"SJAG_01767":null,"SJAG_01829":null,"SJAG_01853":null,"SJAG_02020":null,"SJAG_02033":null,"SJAG_02046":null,"SJAG_02067":null,"SJAG_02071":null,"SJAG_02081":null,"SJAG_02121":null,"SJAG_02184":null,"SJAG_02201":null,"SJAG_02207":null,"SJAG_02224":null,"SJAG_02243":null,"SJAG_02253":null,"SJAG_02280":null,"SJAG_02283":null,"SJAG_02312":null,"SJAG_02324":null,"SJAG_02335":null,"SJAG_02340":null,"SJAG_02359":null,"SJAG_02452":null,"SJAG_02477":null,"SJAG_02479":null,"SJAG_02510":null,"SJAG_02522":null,"SJAG_02531":null,"SJAG_02535":null,"SJAG_02546":null,"SJAG_02585":null,"SJAG_02597":null,"SJAG_02611":null,"SJAG_02643":null,"SJAG_02682":null,"SJAG_02749":null,"SJAG_02755":null,"SJAG_02762":null,"SJAG_02777":null,"SJAG_02802":null,"SJAG_02803":null,"SJAG_02836":null,"SJAG_02840":null,"SJAG_02861":null,"SJAG_02870":null,"SJAG_02871":null,"SJAG_02890":null,"SJAG_02891":null,"SJAG_02894":null,"SJAG_02904":null,"SJAG_03034":null,"SJAG_03040":null,"SJAG_03043":null,"SJAG_03053":null,"SJAG_03065":null,"SJAG_03122":null,"SJAG_03127":null,"SJAG_03133":null,"SJAG_03159":null,"SJAG_03176":null,"SJAG_03192":null,"SJAG_03197":null,"SJAG_03254":null,"SJAG_03262":null,"SJAG_03284":null,"SJAG_03297":null,"SJAG_03326":null,"SJAG_03335":null,"SJAG_03364":null,"SJAG_03383":null,"SJAG_03402":null,"SJAG_03422":null,"SJAG_03423":null,"SJAG_03424":null,"SJAG_03425":null,"SJAG_03459":null,"SJAG_03568":null,"SJAG_03584":null,"SJAG_03636":null,"SJAG_03649":null,"SJAG_03666":null,"SJAG_03762":null,"SJAG_03788":null,"SJAG_03859":null,"SJAG_03919":null,"SJAG_03922":null,"SJAG_03971":null,"SJAG_04019":null,"SJAG_04020":null,"SJAG_04029":null,"SJAG_04066":null,"SJAG_04160":null,"SJAG_04164":null,"SJAG_04168":null,"SJAG_04173":null,"SJAG_04174":null,"SJAG_04176":null,"SJAG_04188":null,"SJAG_04204":null,"SJAG_04207":null,"SJAG_04216":null,"SJAG_04244":null,"SJAG_04256":null,"SJAG_04281":null,"SJAG_04304":null,"SJAG_04324":null,"SJAG_04342":null,"SJAG_04378":null,"SJAG_04414":null,"SJAG_04475":null,"SJAG_04476":null,"SJAG_04478":null,"SJAG_04490":null,"SJAG_04493":null,"SJAG_04494":null,"SJAG_04534":null,"SJAG_04626":null,"SJAG_04663":null,"SJAG_04672":null,"SJAG_04689":null,"SJAG_04695":null,"SJAG_04746":null,"SJAG_04753":null,"SJAG_04788":null,"SJAG_04814":null,"SJAG_04847":null,"SJAG_04889":null,"SJAG_04893":null,"SJAG_04897":null,"SJAG_04918":null,"SJAG_04998":null,"SJAG_05216":null,"SJAG_05218":null,"SJAG_05221":null,"SJAG_05244":null,"SJAG_05248":null,"SJAG_05270":null,"SJAG_05320":null,"SJAG_05573":null,"SJAG_06110":null,"SJAG_06253":null,"SJAG_06612":null,"SJAG_07009":null,"SJAG_07013":null,"SJAG_07014":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ribosome","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0033279","NIF_Subcellular:sao1429207766","Wikipedia:Ribosome"],"synonyms":[{"name":"free ribosome","type":"narrow"},{"name":"membrane bound ribosome","type":"narrow"},{"name":"ribosomal RNA","type":"related"}],"termid":"GO:0005840","terms_by_termid":{"GO:0005762":null,"GO:0005763":null,"GO:0022625":null,"GO:0022626":null,"GO:0022627":null}}


id: PBO:0043504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin associated protein family member 3B","termid":"PBO:0043504"}


id: GO:0090214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of the spongiotrophoblast layer of the placenta where the increase in size or mass contributes to the progression of that layer over time from its formation to its mature state.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"spongiotrophoblast layer development","termid":"GO:0060712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spongiotrophoblast layer developmental growth","termid":"GO:0090214"}


id: GO:0140462
data:
  {"annotated_genes":["SJAG_01745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87398],"is_not":false,"summary":null,"term":"GO:0140462"}]},"cv_name":"biological_process","definition":"The organization of chromatin into heterochromatin at the pericentric region of a chromosome.","definition_xrefs":["PMID:26744419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterochromatin formation","termid":"GO:0031507"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0008150","GO:0006325","GO:0010467"],"is_obsolete":false,"name":"pericentric heterochromatin organization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140462","terms_by_termid":{"GO:0140462":null}}


id: GO:1904534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of telomeric loop disassembly.","definition_xrefs":["PMID:22579284","GOC:nc","GOC:TermGenie","GO_REF:0000058","GOC:BHF","GOC:BHF_telomere"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of telomere maintenance","termid":"GO:0032205"},{"relation_name":"is_a","term_name":"regulation of telomeric loop disassembly","termid":"GO:1904533"},{"relation_name":"negatively_regulates","term_name":"telomeric loop disassembly","termid":"GO:0090657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0032200"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0032200","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"negative regulation of telomeric loop disassembly","synonyms":[{"name":"down regulation of T loop disassembly","type":"exact"},{"name":"down regulation of telomeric loop disassembly","type":"exact"},{"name":"down-regulation of T loop disassembly","type":"exact"},{"name":"down-regulation of telomeric loop disassembly","type":"exact"},{"name":"downregulation of T loop disassembly","type":"exact"},{"name":"downregulation of telomeric loop disassembly","type":"exact"},{"name":"inhibition of T loop disassembly","type":"narrow"},{"name":"inhibition of telomeric loop disassembly","type":"narrow"},{"name":"negative regulation of T loop disassembly","type":"exact"}],"termid":"GO:1904534"}


id: FYPO:0002008
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of aconitate hydratase (also known as aconitase) activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal aconitate hydratase activity","termid":"FYPO:0000920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"decreased aconitate hydratase activity","synonyms":[{"name":"decreased aconitase activity","type":"exact"},{"name":"reduced aconitate hydratase activity","type":"exact"}],"termid":"FYPO:0002008"}


id: GO:0046789
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a receptor on the host cell surface.","definition_xrefs":["PMID:11511370","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell surface binding","termid":"GO:0046812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"host cell surface receptor binding","synonyms":[{"name":"cell surface antigen activity, host-interacting","type":"related"},{"name":"cell surface receptor ligand","type":"related"}],"termid":"GO:0046789"}


id: GO:0046045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of TMP, ribosylthymine monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside monophosphate catabolic process","termid":"GO:0009175"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide catabolic process","termid":"GO:0009222"},{"relation_name":"is_a","term_name":"TMP metabolic process","termid":"GO:0046044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"TMP catabolic process","synonyms":[{"name":"TMP breakdown","type":"exact"},{"name":"TMP catabolism","type":"exact"},{"name":"TMP degradation","type":"exact"}],"termid":"GO:0046045"}


id: GO:1900189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell adhesion involved in single-species biofilm formation.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-substrate adhesion","termid":"GO:0010811"},{"relation_name":"is_a","term_name":"regulation of cell adhesion involved in single-species biofilm formation","termid":"GO:1900187"},{"relation_name":"positively_regulates","term_name":"cell adhesion involved in single-species biofilm formation","termid":"GO:0043709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell adhesion involved in single-species biofilm formation","synonyms":[{"name":"activation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"activation of cell adhesion involved in single-species biofilm formation","type":"narrow"},{"name":"positive regulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"up regulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"up regulation of cell adhesion involved in single-species biofilm formation","type":"exact"},{"name":"up-regulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"up-regulation of cell adhesion involved in single-species biofilm formation","type":"exact"},{"name":"upregulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"upregulation of cell adhesion involved in single-species biofilm formation","type":"exact"}],"termid":"GO:1900189"}


id: GO:0032167
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An amorphous-appearing accumulation of septin proteins at the future site of cytokinesis.","definition_xrefs":["PMID:16009555"],"gene_count":0,"genotype_count":0,"name":"obsolete septin patch (obsolete GO:0032167)","synonyms":[{"name":"septin patch","type":"exact"}],"termid":"GO:0032167"}


id: PR:O59705
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cog2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved oligomeric Golgi complex subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36.08c","synonyms":[{"name":"COG complex subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cog2","type":"exact"},{"name":"component of oligomeric Golgi complex 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59705"}


id: GO:0044716
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction 8-oxo-GDP + H2O = 8-oxo-GMP + phosphate.","definition_xrefs":["RHEA:62356","PMID:22556419","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate phosphatase activity","termid":"GO:0017110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"8-oxo-GDP phosphatase activity","secondary_identifiers":["EC:3.6.1.58","Reactome:R-HSA-2395873"],"termid":"GO:0044716"}


id: PR:O94279
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A magnesium-dependent phosphatase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03815","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"magnesium-dependent phosphatase P8B7.31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.31","secondary_identifiers":["UniProtKB:O94279"],"synonyms":[{"name":"Spom972h-MDP1","type":"exact"}],"termid":"PR:O94279"}


id: GO:2001232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to prospore membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization to plasma membrane","termid":"GO:1903078"},{"relation_name":"is_a","term_name":"regulation of protein localization to prospore membrane","termid":"GO:2001231"},{"relation_name":"positively_regulates","term_name":"protein localization to prospore membrane","termid":"GO:1902657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to prospore membrane","synonyms":[{"name":"positive regulation of protein localisation to prospore membrane","type":"exact"},{"name":"positive regulation of protein targeting to FSM","type":"related"},{"name":"positive regulation of protein targeting to ascospore-type prospore membrane","type":"related"},{"name":"positive regulation of protein targeting to forespore membrane","type":"related"},{"name":"positive regulation of protein targeting to prospore membrane","type":"related"},{"name":"positive regulation of protein-prospore membrane targeting","type":"related"}],"termid":"GO:2001232"}


id: PBO:0060906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurogenin 1","termid":"PBO:0060906"}


id: PBO:0000308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-4 methylsterol oxidase (predicted)","termid":"PBO:0000308"}


id: FYPO:0004380
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin in pericentric regions is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to centromere during vegetative growth","termid":"FYPO:0000451"},{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to pericentric heterochromatin during vegetative growth","synonyms":[{"name":"increased protein localisation to pericentric heterochromatin during vegetative growth","type":"exact"},{"name":"increased protein localization to centric heterochromatin during vegetative growth","type":"exact"},{"name":"increased protein localization to nuclear pericentric heterochromatin during vegetative growth","type":"exact"},{"name":"increased protein localization to pericentric heterochromatin during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004380"}


id: PBO:0058659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6787","termid":"PBO:0058659"}


id: PBO:0059729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 3","termid":"PBO:0059729"}


id: MOD:01153
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an methylsulfanyl group (thiomethyl group).","definition_xrefs":["Unimod:39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiolated residue","termid":"MOD:01886"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylthiolated residue","synonyms":[{"name":"Beta-methylthiolation","type":"related"},{"name":"Methylthio","type":"related"}],"termid":"MOD:01153"}


id: PBO:0035943
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cytoplasmic_microtubule_nucleation_during_mitotic_interphase","termid":"PBO:0035943"}


id: GO:0120226
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to succinyl-CoA, an omega-carboxyacyl-CoA having succinoyl as the S-acyl component.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA binding","termid":"GO:0120227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"succinyl-CoA binding","synonyms":[{"name":"succinyl-coenzyme A binding","type":"exact"}],"termid":"GO:0120226"}


id: PR:Q9UTC7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U4/U6 small nuclear ribonucleoprotein Prp4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00203","PANTHER:PTHR19846:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C227.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.12","secondary_identifiers":["UniProtKB:Q9UTC7"],"synonyms":[{"name":"Spom972h-PRPF4","type":"exact"}],"termid":"PR:Q9UTC7"}


id: GO:0009339
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the oxidation of 2-hydroxy acid to form 2-oxo acid and hydrogen peroxide (H2O2). The enzyme is a flavoprotein (FMN).","definition_xrefs":["PMID:4557653","PMID:8606183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"glycolate oxidase complex","termid":"GO:0009339"}


id: PBO:0058423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4793","termid":"PBO:0058423"}


id: PBO:0089151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi nucleoside-diphosphatase Gda1","termid":"PBO:0089151"}


id: GO:0070412
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a receptor-regulated SMAD signaling protein.","definition_xrefs":["PMID:19114992","GOC:vk","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SMAD binding","termid":"GO:0046332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"R-SMAD binding","synonyms":[{"name":"pathway restricted SMAD binding","type":"exact"},{"name":"pathway-restricted SMAD binding","type":"exact"},{"name":"receptor regulated SMAD binding","type":"exact"},{"name":"receptor-regulated SMAD binding","type":"exact"}],"termid":"GO:0070412"}


id: GO:1905428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of plant organ formation.","definition_xrefs":["GOC:tb","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"plant organ formation","termid":"GO:1905393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of plant organ formation","termid":"GO:1905428"}


id: PBO:0059738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 12","termid":"PBO:0059738"}


id: PBO:0084054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein for yeast Rab family members; Ypt1p is the preferred in vitro substrate but also acts on Sec4p, Ypt31p and Ypt32p; involved in the regulation of ER to Golgi vesicle transport","termid":"PBO:0084054"}


id: GO:1903847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aorta morphogenesis.","definition_xrefs":["GOC:BHF_miRNA","GOC:BHF","GO_REF:0000058","PMID:22269326","GOC:TermGenie","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of artery morphogenesis","termid":"GO:1905651"},{"relation_name":"regulates","term_name":"aorta morphogenesis","termid":"GO:0035909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of aorta morphogenesis","termid":"GO:1903847"}


id: GO:0071359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a double-stranded RNA stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to dsRNA","termid":"GO:0043331"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to dsRNA","synonyms":[{"name":"cellular response to double-stranded RNA","type":"exact"}],"termid":"GO:0071359"}


id: PBO:0052806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 73","termid":"PBO:0052806"}


id: GO:0015953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which a pyrimidine nucleotide is synthesized from another pyrimidine nucleotide.","definition_xrefs":["GOC:mah","ISBN:0306444747","ISBN:0471394831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide metabolic process","termid":"GO:0006220"},{"relation_name":"is_a","term_name":"nucleobase-containing small molecule interconversion","termid":"GO:0015949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"pyrimidine nucleotide interconversion","termid":"GO:0015953"}


id: PBO:0054099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1455","termid":"PBO:0054099"}


id: PBO:0041828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CART prepropeptide","termid":"PBO:0041828"}


id: GO:1905519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of presynaptic active zone assembly.","definition_xrefs":["GOC:rl","GOC:TermGenie","PMID:15797875","GOC:BHF","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of presynaptic active zone assembly","termid":"GO:1905518"},{"relation_name":"is_a","term_name":"negative regulation of presynapse assembly","termid":"GO:1905607"},{"relation_name":"negatively_regulates","term_name":"presynaptic active zone assembly","termid":"GO:1904071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of presynaptic active zone assembly","synonyms":[{"name":"down regulation of pre-synaptic active zone assembly","type":"exact"},{"name":"down regulation of pre-synaptic active zone component assembly","type":"narrow"},{"name":"down regulation of pre-synaptic active zone component formation","type":"narrow"},{"name":"down regulation of pre-synaptic active zone formation","type":"exact"},{"name":"down regulation of presynaptic active zone assembly","type":"exact"},{"name":"down regulation of presynaptic active zone formation","type":"exact"},{"name":"down-regulation of pre-synaptic active zone assembly","type":"exact"},{"name":"down-regulation of pre-synaptic active zone component assembly","type":"narrow"},{"name":"down-regulation of pre-synaptic active zone component formation","type":"narrow"},{"name":"down-regulation of pre-synaptic active zone formation","type":"exact"},{"name":"down-regulation of presynaptic active zone assembly","type":"exact"},{"name":"down-regulation of presynaptic active zone formation","type":"exact"},{"name":"downregulation of pre-synaptic active zone assembly","type":"exact"},{"name":"downregulation of pre-synaptic active zone component assembly","type":"narrow"},{"name":"downregulation of pre-synaptic active zone component formation","type":"narrow"},{"name":"downregulation of pre-synaptic active zone formation","type":"exact"},{"name":"downregulation of presynaptic active zone assembly","type":"exact"},{"name":"downregulation of presynaptic active zone formation","type":"exact"},{"name":"inhibition of pre-synaptic active zone assembly","type":"narrow"},{"name":"inhibition of pre-synaptic active zone component assembly","type":"narrow"},{"name":"inhibition of pre-synaptic active zone component formation","type":"narrow"},{"name":"inhibition of pre-synaptic active zone formation","type":"narrow"},{"name":"inhibition of presynaptic active zone assembly","type":"narrow"},{"name":"inhibition of presynaptic active zone formation","type":"narrow"},{"name":"negative regulation of pre-synaptic active zone assembly","type":"exact"},{"name":"negative regulation of pre-synaptic active zone component assembly","type":"narrow"},{"name":"negative regulation of pre-synaptic active zone component formation","type":"narrow"},{"name":"negative regulation of pre-synaptic active zone formation","type":"exact"},{"name":"negative regulation of presynaptic active zone formation","type":"exact"}],"termid":"GO:1905519"}


id: GO:1990517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a protein is transported to, or maintained in, a location within a photoreceptor outer segment, which is a portion of a modified sensory cilium.","definition_xrefs":["PMID:20212494","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete protein localization to photoreceptor outer segment (obsolete GO:1990517)","termid":"GO:1990517"}


id: FYPO:0001661
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of cyclic AMP measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"altered cellular cAMP level","termid":"FYPO:0001659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular cAMP level","synonyms":[{"name":"increased cAMP accumulation","type":"related"},{"name":"increased cellular cAMP level during mitotic cell cycle","type":"related"},{"name":"increased cellular cAMP level during vegetative growth","type":"exact"},{"name":"increased cellular cyclic AMP level","type":"exact"}],"termid":"FYPO:0001661"}


id: PBO:0091408
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assembly at damage sites is facilitated by Rad57 independently of Swi5","termid":"PBO:0091408"}


id: PBO:0071173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 14","termid":"PBO:0071173"}


id: GO:0004030
data:
  {"annotated_genes":["SJAG_00482","SJAG_02961","SJAG_03786"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74966,96925,102865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004029"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an aldehyde + NAD(P)+ + H2O = an acid + NAD(P)H + H+.","definition_xrefs":["EC:1.2.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00482":null,"SJAG_02961":null,"SJAG_03786":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"aldehyde dehydrogenase [NAD(P)+] activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ALDEHYDE-DEHYDROGENASE-NADORNOP+-RXN","Reactome:R-HSA-6808464","Reactome:R-HSA-5692283","Reactome:R-HSA-5696080"],"synonyms":[{"name":"ALDH","type":"related"},{"name":"aldehyde:NAD(P)+ oxidoreductase activity","type":"related"}],"termid":"GO:0004030","terms_by_termid":{"GO:0004029":null}}


id: PBO:0002163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPR repeats","termid":"PBO:0002163"}


id: PBO:0039317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALMS1 intronic transcript 1","termid":"PBO:0039317"}


id: PBO:0084719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane protein; associates with respiratory chain supercomplexes III (ubiquinol-cytochrome c reductase) and IV (cytochrome c oxidase); identified by sequence comparison with hemiascomycetous yeast species","termid":"PBO:0084719"}


id: PBO:0002175
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"accumulation and persistence of Sfr1 foci in rhp54 delta cells","termid":"PBO:0002175"}


id: PR:000050494
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe) that has been phosphorylated at either position 2, 5, or 7 of one or more C-terminal heptad repeats (YSPTSPS).","definition_xrefs":["PMID:28367989","PRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe)","termid":"PR:000044736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rpb1/Phos(CTD-S2,S5,S7)","pombase_gene_id":"SPBC28F2.12","synonyms":[{"name":"PomBase_original_PRO_term_name: DNA-directed RNA polymerase II subunit rpb1 CTD-phosphorylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rpb1/Phos:CTD","type":"exact"},{"name":"rpb1/Phos(CTD-S2,S5,S7)","type":"exact"}],"termid":"PR:000050494"}


id: GO:0039691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A viral genome replication process where the template genome is double stranded RNA (dsRNA). Genomic dsRNA is first transcribed into single-stranded (ss) mRNA, which is then replicated to ds-genomic RNA.","definition_xrefs":["GOC:jl","VZ:1936","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral RNA genome replication","termid":"GO:0039694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"double stranded viral RNA replication","termid":"GO:0039691"}


id: PR:O74339
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tam41 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidate cytidylyltransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1A4.06c","synonyms":[{"name":"CDP-DAG synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CDP-diacylglycerol synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tam41","type":"exact"},{"name":"TAM41 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mitochondrial translocator assembly and maintenance protein 41 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74339"}


id: GO:0004293
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage of Arg-Xaa bonds in small molecule substrates. Highly selective action to release kallidin (lysyl-bradykinin) from kininogen involves hydrolysis of Met-Xaa or Leu-Xaa. The rat enzyme is unusual in liberating bradykinin directly from autologous kininogens by cleavage at two Arg-Xaa bonds.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tissue kallikrein activity (obsolete GO:0004293)","synonyms":[{"name":"bradykininogenase","type":"broad"},{"name":"callicrein","type":"related"},{"name":"depot-padutin","type":"related"},{"name":"dilminal D","type":"related"},{"name":"glandular kallikrein activity","type":"related"},{"name":"glumorin","type":"related"},{"name":"kallidinogenase","type":"broad"},{"name":"kidney kallikrein","type":"related"},{"name":"kininogenase","type":"broad"},{"name":"kininogenin activity","type":"related"},{"name":"onokrein P","type":"related"},{"name":"padreatin","type":"related"},{"name":"padutin","type":"related"},{"name":"pancreatic kallikrein","type":"related"},{"name":"salivary kallikrein","type":"related"},{"name":"submandibular kallikrein","type":"related"},{"name":"submaxillary kallikrein","type":"related"},{"name":"tissue kallikrein activity","type":"exact"},{"name":"urinary kallikrein","type":"related"},{"name":"urokallikrein","type":"related"}],"termid":"GO:0004293"}


id: PATO:0001214
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001214 temparature_unit (obsolete PATO:0001214)","termid":"PATO:0001214"}


id: PATO:0001008
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001008 absolute latency value (obsolete PATO:0001008)","termid":"PATO:0001008"}


id: PBO:0056460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS1L pseudogene 1","termid":"PBO:0056460"}


id: PR:Q9UT59
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC513.07 gene.","definition_xrefs":["UniProtKB:Q9UT59","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C513.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC513.07","synonyms":[{"name":"Spom972h-SPAC513.07","type":"exact"}],"termid":"PR:Q9UT59"}


id: PR:P22190
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPMIT.03 gene.","definition_xrefs":["UniProtKB:P22190","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized cox1 intron-2 37.2 kDa protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPMIT.03","synonyms":[{"name":"Spom972h-SPMIT.03","type":"exact"},{"name":"maturase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P22190"}


id: PBO:0027435
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_medial_cortical_node","termid":"PBO:0027435"}


id: PBO:0029987
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_glycosylation","termid":"PBO:0029987"}


id: PR:O42931
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S protease regulatory subunit 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23073:SF13","OMA:SCHPO04090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S protease regulatory subunit 7 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.07c","secondary_identifiers":["UniProtKB:O42931"],"synonyms":[{"name":"Spom972h-PSMC2","type":"exact"}],"termid":"PR:O42931"}


id: PBO:0044823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 109F (pseudogene)","termid":"PBO:0044823"}


id: PBO:0031152
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_myo-inositol_import","termid":"PBO:0031152"}


id: GO:1990606
data:
  {"annotated_genes":["SJAG_02384","SJAG_02848"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96024,98834],"is_not":false,"summary":null,"term":"GO:1990606"}]},"cv_name":"molecular_function","definition":"Generation of a 'twisting' activity resulting in the scission of a membrane, driven by GTP hydrolysis.","definition_xrefs":["PMID:11242086","PMID:23530241","PMID:24515348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTPase motor activity","termid":"GO:0061791"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02384":null,"SJAG_02848":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003774"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003924"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003924","GO:0003824","GO:0003774"],"is_obsolete":false,"name":"membrane scission GTPase motor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990606","terms_by_termid":{"GO:1990606":null}}


id: GO:0070133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the process preceding formation of the peptide bond between the first two amino acids of a protein in a mitochondrion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translational initiation","termid":"GO:0045947"},{"relation_name":"is_a","term_name":"regulation of mitochondrial translational initiation","termid":"GO:0070132"},{"relation_name":"negatively_regulates","term_name":"mitochondrial translational initiation","termid":"GO:0070124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0140053"],"is_obsolete":false,"name":"negative regulation of mitochondrial translational initiation","synonyms":[{"name":"negative regulation of mitochondrial translation initiation","type":"exact"}],"termid":"GO:0070133"}


id: PBO:0068836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 74, pseudogene","termid":"PBO:0068836"}


id: PBO:0081317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 101","termid":"PBO:0081317"}


id: PATO:0002260
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being partially upright in position or posture.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"erect","termid":"PATO:0000622"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semi erect","synonyms":[{"name":"semi upright","type":"exact"}],"termid":"PATO:0002260"}


id: GO:0051794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of timing of catagen, the regression phase of the hair cycle.","definition_xrefs":["GOC:ai","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hair follicle maturation","termid":"GO:0048819"},{"relation_name":"regulates","term_name":"catagen","termid":"GO:0042637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of timing of catagen","synonyms":[{"name":"regulation of catagen","type":"related"}],"termid":"GO:0051794"}


id: GO:0018879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving biphenyl, a toxic aromatic hydrocarbon used as a heat transfer agent, as a fungistat in packaging citrus fruits and in plant disease control. Biphenyl can be chlorinated with 1-10 chlorine molecules to form polychlorinated biphenyls (PCBs).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"biphenyl metabolic process","secondary_identifiers":["UM-BBD_pathwayID:bph"],"synonyms":[{"name":"biphenyl metabolism","type":"exact"},{"name":"xenene metabolic process","type":"exact"},{"name":"xenene metabolism","type":"exact"}],"termid":"GO:0018879"}


id: PBO:0076642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming growth factor beta regulator 1","termid":"PBO:0076642"}


id: GO:0007172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a complex capable of relaying a signal within a cell.","definition_xrefs":["PMID:9646862","GOC:bf","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"signal complex assembly","synonyms":[{"name":"signal complex formation","type":"exact"}],"termid":"GO:0007172"}


id: FYPO:0002917
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 4 of histone H3 does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K4 methylation during vegetative growth","termid":"FYPO:0002330"},{"relation_name":"is_a","term_name":"abolished histone methylation during vegetative growth","termid":"FYPO:0002565"},{"relation_name":"is_a","term_name":"abolished protein lysine methylation during vegetative growth","termid":"FYPO:0004488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"abolished histone H3-K4 methylation during vegetative growth","synonyms":[{"name":"abolished histone H3 K4 methylation during vegetative growth","type":"exact"},{"name":"abolished histone H3-K4 methylation during mitotic cell cycle","type":"related"},{"name":"abolished histone H3K4me during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K4 methylation during vegetative growth","type":"exact"},{"name":"histone H3-K4 methylation abolished during vegetative growth","type":"exact"},{"name":"histone H3-K4 methylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0002917"}


id: SO:0000112
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An oligo to which new deoxyribonucleotides can be added by DNA polymerase.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ss_oligo","termid":"SO:0000441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primer","secondary_identifiers":["http://en.wikipedia.org/wiki/Primer_(molecular_biology)"],"synonyms":[{"name":"DNA primer","type":"exact"},{"name":"primer oligonucleotide","type":"exact"},{"name":"primer polynucleotide","type":"exact"},{"name":"primer sequence","type":"exact"}],"termid":"SO:0000112"}


id: PBO:0041739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin regulated spectrin associated protein 1","termid":"PBO:0041739"}


id: GO:0042716
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A pigment-bearing structure that is derived from the cytoplasmic membrane, sometimes consisting of simple invaginations and sometimes a complete vesicle. This component is found in certain photosynthetic bacteria and cyanobacteria.","definition_xrefs":["PMID:11867431","ISBN:0395825172","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"plasma membrane-derived chromatophore","synonyms":[{"name":"chromatophore vesicle","type":"related"}],"termid":"GO:0042716"}


id: FYPO:0000376
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the frequency of occurrence of apoptosis is decreased. Apoptosis is a form of cell death characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies.","definition_xrefs":["PomBase:mah","GO:0006915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"decreased frequency of apoptosis","synonyms":[{"name":"apoptosis: decreased","type":"related"},{"name":"decreased apoptosis","type":"exact"},{"name":"decreased apoptotic frequency","type":"exact"},{"name":"reduced frequency of apoptosis","type":"exact"}],"termid":"FYPO:0000376"}


id: MOD:00507
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant, replaced by MOD:01653. Remap to MOD:01653.","definition_xrefs":["Unimod:139","DeltaMass:0"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00507 5-dimethylaminonaphthalene-1-sulfonyl (obsolete MOD:00507)","synonyms":[{"name":"5-dimethylaminonaphthalene-1-sulfonyl","type":"related"},{"name":"Dansyl","type":"related"},{"name":"Dansyl (Dns)","type":"exact"}],"termid":"MOD:00507"}


id: GO:2001066
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to amylopectin.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"amylopectin binding","termid":"GO:2001066"}


id: GO:0090328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of olfactory learning. Olfactory learning is any process in an organism in which a relatively long-lasting adaptive behavioral change occurs in response to (repeated) exposure to an olfactory cue.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nervous system process","termid":"GO:0031644"},{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"is_a","term_name":"regulation of behavior","termid":"GO:0050795"},{"relation_name":"regulates","term_name":"olfactory learning","termid":"GO:0008355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of olfactory learning","termid":"GO:0090328"}


id: PBO:0059942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 28","termid":"PBO:0059942"}


id: PBO:0113368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates the vacuolar V-ATPase; inhibits V1-ATPase activity and triggers ATP-dependent disassembly of the V-ATPase holoenzyme, counteracting the function of the RAVE complex; localizes to the cytoplasm; required for retention of the vacuolar-ATPase V0 domain subunit Stv1p in pre-vacuolar compartments; involved in resistance to oxidative damage; member of a conserved family of TLDc domain proteins found in eukaryotes; contains an N-terminal EF-hand-like domain","termid":"PBO:0113368"}


id: GO:0106296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of resolvin family D-series, hydroxy fatty acids derived from docosahexaenoic acid.","definition_xrefs":["PMID:12391014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resolvin biosynthetic process","termid":"GO:0106295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"D-series resolvin biosynthetic process","termid":"GO:0106296"}


id: PBO:0044107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen 55","termid":"PBO:0044107"}


id: GO:0140250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein at the synapse.","definition_xrefs":["PMID:23083742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation protein catabolic process at synapse","termid":"GO:0140250"}


id: PBO:0065136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase cAMP-dependent X-linked catalytic subunit","termid":"PBO:0065136"}


id: PBO:0051866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon stimulated exonuclease gene 20","termid":"PBO:0051866"}


id: PBO:0047805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box K2","termid":"PBO:0047805"}


id: PBO:0078964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon AGA) 3-1","termid":"PBO:0078964"}


id: PBO:0078243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 22/OR9-2 (pseudogene)","termid":"PBO:0078243"}


id: PATO:0001105
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001105 absolute strain value (obsolete PATO:0001105)","termid":"PATO:0001105"}


id: PBO:0045739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EBF transcription factor 2","termid":"PBO:0045739"}


id: PBO:0005557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf13","termid":"PBO:0005557"}


id: PBO:0080354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 9, pseudogene","termid":"PBO:0080354"}


id: GO:0070416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving trehalose that occur as a result of deprivation of water.","definition_xrefs":["GOC:jp","PMID:9797333","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trehalose metabolism in response to stress","termid":"GO:0070413"},{"relation_name":"part_of","term_name":"response to water deprivation","termid":"GO:0009414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"trehalose metabolism in response to water deprivation","synonyms":[{"name":"trehalose metabolic process involved in response to water deprivation","type":"exact"}],"termid":"GO:0070416"}


id: GO:0160124
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a guanyl nucleotide exchange factor.","definition_xrefs":["PMID:37463208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0140677","GO:0003674"],"is_obsolete":false,"name":"guanyl nucleotide exchange factor activator activity","termid":"GO:0160124"}


id: GO:0042550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stabilization of the photosystem I protein complex, resulting from the phosphorylation of its structural protein subunits, in a cell actively involved in photosynthesis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photosynthesis, light reaction","termid":"GO:0042548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"photosystem I stabilization","termid":"GO:0042550"}


id: PBO:0030701
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0030701"}


id: GO:0010733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of protein glutathionylation. Protein glutathionylation is the protein modification process in which a glutathione molecule is added to a protein amino acid through a disulfide linkage.","definition_xrefs":["GOC:tb","GOC:rl","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein glutathionylation","termid":"GO:0010732"},{"relation_name":"is_a","term_name":"positive regulation of protein modification process","termid":"GO:0031401"},{"relation_name":"positively_regulates","term_name":"protein glutathionylation","termid":"GO:0010731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein glutathionylation","synonyms":[{"name":"positive regulation of protein amino acid glutathionylation","type":"exact"}],"termid":"GO:0010733"}


id: PBO:0028936
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_polypeptone","termid":"PBO:0028936"}


id: GO:0004374
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + carbon dioxide (CO2), followed by S-aminomethyldihydrolipoylprotein + (6S)-tetrahydrofolate = dihydrolipoylprotein + (6R)-5,10-methylenetetrahydrofolate + ammonia. Made up of two components, aminomethyltransferase and glycine dehydrogenase (decarboxylating).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete glycine cleavage system (obsolete GO:0004374)","synonyms":[{"name":"glycine cleavage system","type":"exact"},{"name":"glycine synthase","type":"broad"}],"termid":"GO:0004374"}


id: PBO:0024481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMPACT domain protein, possible chaperone (predicted)","termid":"PBO:0024481"}


id: PBO:0003792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit Apc13","termid":"PBO:0003792"}


id: GO:1904095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endosperm development.","definition_xrefs":["PMID:25194028","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of endosperm development","termid":"GO:2000014"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"endosperm development","termid":"GO:0009960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endosperm development","synonyms":[{"name":"down regulation of endosperm development","type":"exact"},{"name":"down-regulation of endosperm development","type":"exact"},{"name":"downregulation of endosperm development","type":"exact"},{"name":"inhibition of endosperm development","type":"narrow"}],"termid":"GO:1904095"}


id: SO:0002323
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A frameshift_variant (SO:0001589) that is degraded by nonsense-mediated decay (NMD).","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frameshift_variant","termid":"SO:0001589"},{"relation_name":"is_a","term_name":"NMD_triggering_variant","termid":"SO:0002319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frameshift_variant_NMD_triggering","synonyms":[{"name":"frameshift variant-NMD triggering","type":"exact"},{"name":"frameshift variant-nonsense-mediated decay triggering","type":"exact"}],"termid":"SO:0002323"}


id: MOD:00219
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to L-citrulline.","definition_xrefs":["RESID:AA0214","OMSSA:33","PubMed:2466844","DeltaMass:0","Unimod:7#R"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-citrulline","synonyms":[{"name":"(S)-2-amino-5-(carbamoylamino)pentanoic acid","type":"exact"},{"name":"2-amino-5-(aminocarbonyl)aminopentanoic acid","type":"exact"},{"name":"Cit","type":"exact"},{"name":"Citrulline","type":"exact"},{"name":"Deamidated","type":"related"},{"name":"Deamidation","type":"related"},{"name":"L-citrulline","type":"exact"},{"name":"MOD_RES Citrulline","type":"exact"},{"name":"N5-(aminocarbonyl)ornithine","type":"exact"},{"name":"N5-carbamoylornithine","type":"exact"},{"name":"N5-carbamylornithine","type":"exact"},{"name":"alpha-amino-delta-ureidovaleric acid","type":"exact"},{"name":"citrullinationr","type":"exact"},{"name":"delta-ureidonorvaline","type":"exact"}],"termid":"MOD:00219"}


id: GO:0098635
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any protein complex that is capable of carrying out some part of the process of cell-cell adhesion.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein complex involved in cell adhesion","termid":"GO:0098636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein complex involved in cell-cell adhesion","termid":"GO:0098635"}


id: GO:0031265
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed upon binding of Fas/CD95/APO-1 to its ligand. The complex includes FADD/Mort1, procaspase-8/10 and c-FLIP in addition to the ligand-bound receptor.","definition_xrefs":["PMID:12628743","PMID:12655293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"death-inducing signaling complex","termid":"GO:0031264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"CD95 death-inducing signaling complex","synonyms":[{"name":"CD95 DISC","type":"exact"},{"name":"CD95 death-inducing signalling complex","type":"exact"},{"name":"Fas death-inducing signaling complex","type":"exact"}],"termid":"GO:0031265"}


id: GO:0086009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which ions are transported across a membrane such that the membrane potential changes in the repolarizing direction, toward the steady state potential. For example, the repolarization during an action potential is from a positive membrane potential towards a negative resting potential.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane repolarization","termid":"GO:0086009"}


id: PBO:0004483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis protein Dph1 (predicted)","termid":"PBO:0004483"}


id: PBO:0076142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUCLG2 pseudogene 1","termid":"PBO:0076142"}


id: GO:0042807
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-enclosed sac that takes up most of the volume of a mature plant cell. Functions include storage, separation of toxic byproducts, and cell growth determination.","definition_xrefs":["ISBN:9780815341116","Wikipedia:Vacuole"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type vacuole","termid":"GO:0000325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005575","GO:0005773","GO:0005737"],"is_obsolete":false,"name":"central vacuole","termid":"GO:0042807"}


id: GO:1990862
data:
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id: PBO:0001097
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id: GO:0045341
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id: GO:2001195
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id: FYECO:0000108
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id: PBO:0003678
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id: PBO:0029073
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id: GO:0006163
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id: PBO:0073922
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id: GO:0051804
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id: FYPO:0006709
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id: MOD:00133
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id: PBO:0073689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIX homeobox 2","termid":"PBO:0073689"}


id: PBO:0083480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified genes YJL134W/LCB3","termid":"PBO:0083480"}


id: GO:0048053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the R1 and R6 pair of photoreceptors in the eye over time, from their formation to the mature structures. R1 and R6 are paired photoreceptors that contribute to the outer rhabdomeres. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor development","termid":"GO:0042051"},{"relation_name":"part_of","term_name":"R1/R6 cell differentiation","termid":"GO:0048052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"R1/R6 development","termid":"GO:0048053"}


id: GO:0050302
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + indole-3-acetaldehyde + O2 = (indol-3-yl)acetate + H+ + H2O2.","definition_xrefs":["RHEA:16277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aryl-aldehyde oxidase activity","termid":"GO:0018488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"indole-3-acetaldehyde oxidase activity","secondary_identifiers":["KEGG_REACTION:R02681","EC:1.2.3.7","MetaCyc:INDOLE-3-ACETALDEHYDE-OXIDASE-RXN"],"synonyms":[{"name":"(indol-3-yl)acetaldehyde:oxygen oxidoreductase activity","type":"related"},{"name":"AO1","type":"related"},{"name":"IAA oxidase activity","type":"related"},{"name":"IAAld oxidase activity","type":"related"},{"name":"indole-3-acetaldehyde:oxygen oxidoreductase activity","type":"related"},{"name":"indoleacetaldehyde oxidase activity","type":"related"}],"termid":"GO:0050302"}


id: PATO:0000627
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern quality inhering in a bearer by virtue of the bearer's being confined or restricted to a particular location.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"localized","synonyms":[{"name":"focal","type":"exact"},{"name":"localised","type":"exact"}],"termid":"PATO:0000627"}


id: FYPO:0004812
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the termination of transcription by RNA polymerase II at sites in ribosomal DNA (rDNA) is abnormal.","definition_xrefs":["PMID:25417108","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal termination of RNA polymerase II transcription","termid":"FYPO:0004811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0000294","FYPO:0001985"],"is_obsolete":false,"name":"abnormal termination of RNA polymerase II transcription at rDNA","synonyms":[{"name":"abnormal RNA polymerase II release at rDNA","type":"related"},{"name":"abnormal RNA polymerase II transcription termination at rDNA","type":"exact"},{"name":"abnormal termination of RNA polymerase II transcription at rDNA during mitotic cell cycle","type":"related"},{"name":"abnormal termination of RNA polymerase II transcription at rDNA during vegetative growth","type":"exact"},{"name":"abnormal termination of RNA polymerase II transcription at ribosomal DNA","type":"related"}],"termid":"FYPO:0004812"}


id: PATO:0002377
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structure quality inhering in a bearer by virtue of the bearer's being not filed with air.","definition_xrefs":["PATOC:CVS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure, cavities","termid":"PATO:0002014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uninflated","termid":"PATO:0002377"}


id: PBO:0047509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing kindlin 1","termid":"PBO:0047509"}


id: GO:1901705
data:
  {"annotated_genes":["SJAG_00107","SJAG_06635","SJAG_00830","SJAG_00396","SJAG_04098","SJAG_04149","SJAG_03985"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83692,86744,99356,99843,104369,106488,107153,109318],"is_not":false,"summary":null,"term":"GO:1901705"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-isoleucine.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate family amino acid biosynthetic process","termid":"GO:0009067"},{"relation_name":"is_a","term_name":"isoleucine biosynthetic process","termid":"GO:0009097"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00107":null,"SJAG_00396":null,"SJAG_00830":null,"SJAG_03985":null,"SJAG_04098":null,"SJAG_04149":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"L-isoleucine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-isoleucine anabolism","type":"exact"},{"name":"L-isoleucine biosynthesis","type":"exact"},{"name":"L-isoleucine formation","type":"exact"},{"name":"L-isoleucine synthesis","type":"exact"}],"termid":"GO:1901705","terms_by_termid":{"GO:1901705":null}}


id: GO:0075335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its adenylate cyclase-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of symbiont adenylate cyclase-mediated signal transduction in response to host (obsolete GO:0075335)","termid":"GO:0075335"}


id: PBO:0027828
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_positive_regulation_of_transcription_during_G0_phase","termid":"PBO:0027828"}


id: PBO:0038921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor G3","termid":"PBO:0038921"}


id: PBO:0029645
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population_at_high_temperature_(obsolete_FYPO:0002075)","termid":"PBO:0029645"}


id: GO:0019550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glutamate into other compounds, including aspartate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate metabolic process","termid":"GO:0006531"},{"relation_name":"is_a","term_name":"glutamate catabolic process","termid":"GO:0006538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044248","GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glutamate catabolic process to aspartate","secondary_identifiers":["MetaCyc:GLUTDEG-PWY"],"synonyms":[{"name":"glutamate breakdown to aspartate","type":"exact"},{"name":"glutamate degradation to aspartate","type":"exact"}],"termid":"GO:0019550"}


id: PBO:0053223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat LGI family member 3","termid":"PBO:0053223"}


id: GO:0030410
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3 S-adenosyl-L-methionine(1+) = 3 S-methyl-5'-thioadenosine + 3 H+ + nicotianamine.","definition_xrefs":["EC:2.5.1.43","RHEA:16481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016765"],"is_obsolete":false,"name":"nicotianamine synthase activity","secondary_identifiers":["KEGG_REACTION:R00075","MetaCyc:2.5.1.43-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:S-adenosyl-L-methionine:S-adenosyl-L-methionine 3-amino-3-carboxypropyltransferase activity","type":"related"}],"termid":"GO:0030410"}


id: PBO:0047973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 1","termid":"PBO:0047973"}


id: PR:P78921
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A T-complex protein 1 subunit theta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-complex protein 1 subunit theta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.05c","secondary_identifiers":["UniProtKB:P78921"],"synonyms":[{"name":"CCT-theta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CCT8","type":"exact"},{"name":"TCP-1-theta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78921"}


id: PBO:0109628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1L (pseudogene)","termid":"PBO:0109628"}


id: PATO:0001673
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Structure quality that is the presence of closed epithelium bounded capsules containing one or more liquid or solid organism substances.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure, cavities","termid":"PATO:0002014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystic","synonyms":[{"name":"cysts","type":"narrow"}],"termid":"PATO:0001673"}


id: GO:0080086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the filament over time, from its formation to the mature structure. Filament is the stalk of a stamen.","definition_xrefs":["PMID:19139039","PO:0009067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"stamen development","termid":"GO:0048443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stamen filament development","synonyms":[{"name":"filament development","type":"exact"}],"termid":"GO:0080086"}


id: PBO:0087319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sm-like protein involved in docking and fusion of exocytic vesicles; binds to assembled SNARE complexes at the membrane and stimulates membrane fusion; localization to sites of secretion (bud neck and bud tip) is dependent on SNARE function; interacts directly with essential exocyst subunit Sec6p","termid":"PBO:0087319"}


id: GO:2000336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endothelial microparticle formation.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of blood microparticle formation","termid":"GO:2000333"},{"relation_name":"is_a","term_name":"regulation of endothelial microparticle formation","termid":"GO:2000335"},{"relation_name":"negatively_regulates","term_name":"endothelial microparticle formation","termid":"GO:0072565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endothelial microparticle formation","synonyms":[{"name":"negative regulation of endothelial microparticle generation","type":"exact"},{"name":"negative regulation of endothelial microparticle release","type":"exact"}],"termid":"GO:2000336"}


id: PBO:0067616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 788, pseudogene","termid":"PBO:0067616"}


id: GO:0035234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Programmed cell death of an errant germ line cell that is outside the normal migratory path or ectopic to the gonad. This is an important mechanism of regulating germ cell survival within the embryo.","definition_xrefs":["PMID:12814944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"programmed cell death involved in cell development","termid":"GO:0010623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ectopic germ cell programmed cell death","synonyms":[{"name":"programmed cell death of ectopic germ cells","type":"exact"},{"name":"programmed cell death, ectopic germ cells","type":"exact"}],"termid":"GO:0035234"}


id: FYPO:0001435
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing erythromycin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002058","FYPO:0000257","FYPO:0002060","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on erythromycin","synonyms":[{"name":"normal cell population growth in presence of erythromycin","type":"exact"},{"name":"normal cell population growth on erythromycin","type":"exact"},{"name":"normal cellular response to erythromycin","type":"related"},{"name":"normal vegetative cell population growth on erythromycin","type":"exact"}],"termid":"FYPO:0001435"}


id: GO:0034185
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an apolipoprotein, the protein component of a lipoprotein complex.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"apolipoprotein binding","termid":"GO:0034185"}


id: PBO:0034665
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-thin_stable_microtubule_bundle","termid":"PBO:0034665"}


id: GO:0150037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcium-dependent activation of synaptic vesicle fusion.","definition_xrefs":["GOC:bc","PMID:27052163","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic vesicle fusion to presynaptic active zone membrane","termid":"GO:0031630"},{"relation_name":"regulates","term_name":"calcium-dependent activation of synaptic vesicle fusion","termid":"GO:0099502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0016192","GO:0061024","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of calcium-dependent activation of synaptic vesicle fusion","termid":"GO:0150037"}


id: PBO:0067227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 297, pseudogene","termid":"PBO:0067227"}


id: PBO:0067569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 724, pseudogene","termid":"PBO:0067569"}


id: GO:0072463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about whether spindle is correctly assembled and chromosomes are attached to the spindle is received and converted into a molecular signal, contributing to a meiotic spindle assembly checkpoint.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in meiotic spindle assembly checkpoint (obsolete GO:0072463)","synonyms":[{"name":"meiotic spindle assembly checkpoint sensor mechanism","type":"related"},{"name":"meiotic spindle assembly checkpoint sensor process","type":"related"},{"name":"sensing involved in meiotic spindle assembly checkpoint","type":"related"}],"termid":"GO:0072463"}


id: MOD:01119
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-geranylgeranyl-L-cysteine methyl ester.","definition_xrefs":["PubMed:1483450","PubMed:15609361","RESID:AA0105#var","RESID:AA0104#var"],"direct_ancestors":[{"relation_name":"has_functional_parent","term_name":"S-geranylgeranyl-L-cysteine","termid":"MOD:00113"},{"relation_name":"has_functional_parent","term_name":"L-cysteine methyl ester","termid":"MOD:00114"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-geranylgeranyl-L-cysteine methyl ester","synonyms":[{"name":"SGergerOMeCys","type":"exact"}],"termid":"MOD:01119"}


id: GO:0048559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that determines the orientation of the floral organs with reference to the central axis of the flower.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"establishment of plant organ orientation","termid":"GO:0090707"},{"relation_name":"part_of","term_name":"flower morphogenesis","termid":"GO:0048439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of floral organ orientation","termid":"GO:0048559"}


id: PBO:0061406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropeptide S receptor 1","termid":"PBO:0061406"}


id: PBO:0018043
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POlyPloidy","termid":"PBO:0018043"}


id: GO:0072285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where a mesenchymal cell establishes apical/basolateral polarity,forms intercellular adhesive junctions, synthesizes basement membrane components and becomes an epithelial cell that will contribute to the shaping of the metanephric renal vesicle.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal to epithelial transition involved in metanephros morphogenesis","termid":"GO:0003337"},{"relation_name":"is_a","term_name":"mesenchymal to epithelial transition involved in renal vesicle formation","termid":"GO:0072036"},{"relation_name":"part_of","term_name":"metanephric renal vesicle formation","termid":"GO:0072093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal to epithelial transition involved in metanephric renal vesicle formation","termid":"GO:0072285"}


id: PBO:0089488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoketolase family protein","termid":"PBO:0089488"}


id: GO:0052093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a symbiotic cellular or anatomical structure for the purpose of obtaining nutrients from its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of structure involved in a symbiotic process","termid":"GO:0044111"},{"relation_name":"part_of","term_name":"acquisition of nutrients from host","termid":"GO:0044002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of specialized structure for nutrient acquisition","synonyms":[{"name":"formation by organism of specialized structure for nutrient acquisition from host","type":"exact"},{"name":"formation by symbiont of specialized structure for nutrient acquisition from host","type":"exact"},{"name":"formation of specialized structure for nutrient acquisition from host","type":"exact"}],"termid":"GO:0052093"}


id: PBO:0029162
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_nitrogen_starvation","termid":"PBO:0029162"}


id: PBO:0055416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2846","termid":"PBO:0055416"}


id: RO:0002487
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"relation_between_structure_and_stage","termid":"RO:0002487"}


id: PBO:0090669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ku domain helicase (human XRCC5 ortholog) Pku80","termid":"PBO:0090669"}


id: GO:0046298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2,4-dichlorobenzoate, a chlorinated aromatic compound which is a key intermediate in the aerobic degradation of polychlorinated biphenyls (PCBs).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2,4-dichlorobenzoate metabolic process","termid":"GO:0018898"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"2,4-dichlorobenzoate catabolic process","synonyms":[{"name":"2,4-dichlorobenzoate breakdown","type":"exact"},{"name":"2,4-dichlorobenzoate catabolism","type":"exact"},{"name":"2,4-dichlorobenzoate degradation","type":"exact"}],"termid":"GO:0046298"}


id: GO:0070170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tooth mineralization, the deposition of calcium salts in tooth structures.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biomineral tissue development","termid":"GO:0070167"},{"relation_name":"regulates","term_name":"tooth mineralization","termid":"GO:0034505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tooth mineralization","termid":"GO:0070170"}


id: GO:0072750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a leptomycin B stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to fatty acid","termid":"GO:0071398"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"response to leptomycin B","termid":"GO:1901344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to leptomycin B","termid":"GO:0072750"}


id: PBO:0036287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-patch RNA-binding protein, involved in splicing (predicted)","termid":"PBO:0036287"}


id: PBO:0001972
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.2.15","termid":"PBO:0001972"}


id: GO:1904029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cyclin-dependent protein kinase activity.","definition_xrefs":["PMID:22995177","GOC:als","GOC:TermGenie","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein kinase activity","termid":"GO:0045859"},{"relation_name":"is_a","term_name":"regulation of cell cycle","termid":"GO:0051726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of cyclin-dependent protein kinase activity","termid":"GO:1904029"}


id: FYPO:0005881
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of ophthalmic acid measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"ophthalmic acid absent from cell","synonyms":[{"name":"ophthalmic acid absent from cell during mitotic cell cycle","type":"related"},{"name":"ophthalmic acid absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0005881"}


id: GO:0045109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Control of the spatial distribution of intermediate filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate filament cytoskeleton organization","termid":"GO:0045104"},{"relation_name":"is_a","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010"],"is_obsolete":false,"name":"intermediate filament organization","synonyms":[{"name":"intermediate filament organisation","type":"exact"}],"termid":"GO:0045109"}


id: PBO:0039261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 7 family member A1 pseudogene 3","termid":"PBO:0039261"}


id: GO:2001241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of extrinsic apoptotic signaling pathway in absence of ligand.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of extrinsic apoptotic signaling pathway","termid":"GO:2001238"},{"relation_name":"is_a","term_name":"regulation of extrinsic apoptotic signaling pathway in absence of ligand","termid":"GO:2001239"},{"relation_name":"positively_regulates","term_name":"extrinsic apoptotic signaling pathway in absence of ligand","termid":"GO:0097192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of extrinsic apoptotic signaling pathway in absence of ligand","synonyms":[{"name":"positive regulation of dependence receptor signaling pathway","type":"related"},{"name":"positive regulation of extrinsic apoptosis in absence of ligand","type":"narrow"},{"name":"positive regulation of extrinsic apoptotic signalling pathway in absence of ligand","type":"exact"}],"termid":"GO:2001241"}


id: PBO:0053398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 328","termid":"PBO:0053398"}


id: GO:0070803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of metula development, a process that leads to the formation of metulae. Metulae are elongated mononucleate cells that bud from the surface of the conidiophore tip.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"regulation of metula development","termid":"GO:0070802"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"metula development","termid":"GO:0070789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of metula development","termid":"GO:0070803"}


id: PBO:0031206
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_calcium_ion","termid":"PBO:0031206"}


id: PBO:0025533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-C ortholog Cnp3","termid":"PBO:0025533"}


id: PBO:0066497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ret finger protein like 4B","termid":"PBO:0066497"}


id: PBO:0078420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon GCC) 2-1","termid":"PBO:0078420"}


id: PR:Q9UUD9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC17G9.13c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUD9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17G9.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17G9.13c","synonyms":[{"name":"Spom972h-SPBC17G9.13c","type":"exact"}],"termid":"PR:Q9UUD9"}


id: PBO:0062003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily H member 2","termid":"PBO:0062003"}


id: PBO:0071229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 70","termid":"PBO:0071229"}


id: PBO:0031667
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_modification_during_vegetative_growth","termid":"PBO:0031667"}


id: GO:0120014
data:
  {"annotated_genes":["SJAG_04370","SJAG_01229","SJAG_03172","SJAG_16459","SJAG_03416","SJAG_03741","SJAG_01305","SJAG_03710","SJAG_06440","SJAG_03721","SJAG_03338","SJAG_00576","SJAG_01225","SJAG_00230","SJAG_03746"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85296,86964,100112,101895,102791,103578,103707],"is_not":false,"summary":null,"term":"GO:0120014"},{"annotations":[97342,105561,98280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990050"},{"annotations":[93615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120019"},{"annotations":[93616,94693,93552,105575,112318],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008526"}]},"cv_name":"molecular_function","definition":"Removes a phospholipid from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle.","definition_xrefs":["PMID:24220498","GOC:krc","PMID:25797198","PMID:20823909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transporter activity","termid":"GO:0005548"},{"relation_name":"is_a","term_name":"lipid transfer activity","termid":"GO:0120013"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00230":null,"SJAG_00576":null,"SJAG_01225":null,"SJAG_01229":null,"SJAG_01305":null,"SJAG_03172":null,"SJAG_03338":null,"SJAG_03416":null,"SJAG_03710":null,"SJAG_03721":null,"SJAG_03741":null,"SJAG_03746":null,"SJAG_04370":null,"SJAG_06440":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0120013"}],"interesting_parent_ids":["GO:0120013","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"phospholipid transfer activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"intermembrane phospholipid transfer activity","type":"narrow"},{"name":"phospholipid carrier activity","type":"exact"}],"termid":"GO:0120014","terms_by_termid":{"GO:0008526":null,"GO:0120014":null,"GO:0120019":null,"GO:1990050":null}}


id: PR:Q10141
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mms1 gene.","definition_xrefs":["UniProtKB:Q10141","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3H8.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H8.05c","synonyms":[{"name":"Spom972h-mms1","type":"exact"}],"termid":"PR:Q10141"}


id: GO:0048192
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Strengthening of a bond with a peptide antigen; a fragment of a foreign protein derived by proteolysis within the cell.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide antigen stabilization activity (obsolete GO:0048192)","synonyms":[{"name":"peptide antigen stabilization activity","type":"exact"}],"termid":"GO:0048192"}


id: GO:0051997
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-hydroxy-2-oxo-4-ureido-2,5-dihydro-1H imidazole-5-carboxylate + H+ = S-allantoin + CO2.","definition_xrefs":["MetaCyc:RXN-6201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R06604","RHEA:26301","EC:4.1.1.97"],"synonyms":[{"name":"4-(carbamoylamino)-5-hydroxy-2-oxo-2,5-dihydro-1H-imidazole-5-carboxylate decarboxylase activity","type":"exact"},{"name":"OHCU decarboxylase activity","type":"exact"}],"termid":"GO:0051997"}


id: PR:O94702
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An endoplasmic reticulum metallopeptidase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum metallopeptidase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.02c","secondary_identifiers":["UniProtKB:O94702"],"synonyms":[{"name":"FXNA-like protease (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ERMP1","type":"exact"}],"termid":"PR:O94702"}


id: PBO:0079347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 31, pseudogene","termid":"PBO:0079347"}


id: PBO:0077576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and immunoglobulin domain containing 1","termid":"PBO:0077576"}


id: PBO:0066018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN, member RAS oncogene family","termid":"PBO:0066018"}


id: SO:0000989
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Small non-coding RNA (59-60 nt long) containing 5' and 3' ends that are predicted to come together to form a stem structure. Identified in the social amoeba Dictyostelium discoideum and localized in the cytoplasm.","definition_xrefs":["PMID:15333696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"class_II_RNA","synonyms":[{"name":"class II RNA","type":"exact"}],"termid":"SO:0000989"}


id: GO:0072451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about cell size is received and converted into a molecular signal, contributing to a G2/M transition size control checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in G2 cell size control checkpoint (obsolete GO:0072451)","synonyms":[{"name":"G2/M transition size control checkpoint sensor mechanism","type":"related"},{"name":"G2/M transition size control checkpoint sensor process","type":"related"},{"name":"detection of stimulus involved in G2/M transition size control checkpoint","type":"exact"},{"name":"detection of stimulus involved in mitotic cell cycle G2/M transition size control checkpoint","type":"related"},{"name":"sensing involved in G2/M transition size control checkpoint","type":"related"}],"termid":"GO:0072451"}


id: PBO:0031837
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitochondrial_morphology","termid":"PBO:0031837"}


id: PBO:0089567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GEF Sec2","termid":"PBO:0089567"}


id: PBO:0005886
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein in cob intron","termid":"PBO:0005886"}


id: GO:0050135
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + H2O = ADP-D-ribose-2-phosphate + nicotinamide.","definition_xrefs":["RHEA:19849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"NADP+ nucleosidase activity","synonyms":[{"name":"NAD(P)+ nucleosidase activity","type":"broad"},{"name":"NADP nucleosidase activity","type":"exact"},{"name":"NADP(+) nucleosidase activity","type":"exact"},{"name":"NADP+ glycohydrolase activity","type":"related"},{"name":"NADPase activity","type":"related"}],"termid":"GO:0050135"}


id: GO:0060319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Erythrocyte differentiation which occurs as part of the process of primitive hemopoiesis.","definition_xrefs":["GOC:add","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"erythrocyte differentiation","termid":"GO:0030218"},{"relation_name":"part_of","term_name":"primitive hemopoiesis","termid":"GO:0060215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primitive erythrocyte differentiation","synonyms":[{"name":"primitive RBC differentiation","type":"exact"},{"name":"primitive erythropoiesis","type":"exact"},{"name":"primitive red blood cell differentiation","type":"exact"}],"termid":"GO:0060319"}


id: PBO:0041086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain and PHD finger containing 1","termid":"PBO:0041086"}


id: GO:2001007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellulose biosynthetic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of cellulose biosynthetic process","termid":"GO:2001006"},{"relation_name":"negatively_regulates","term_name":"cellulose biosynthetic process","termid":"GO:0030244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of cellulose biosynthetic process","synonyms":[{"name":"negative regulation of cellulose anabolism","type":"exact"},{"name":"negative regulation of cellulose biosynthesis","type":"exact"},{"name":"negative regulation of cellulose formation","type":"exact"},{"name":"negative regulation of cellulose synthesis","type":"exact"}],"termid":"GO:2001007"}


id: PBO:0047343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose-bisphosphatase 1","termid":"PBO:0047343"}


id: GO:0072172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a mesonephric tubule from unspecified parts. A mesonephric tubule is an epithelial tube that is part of the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule formation","termid":"GO:0072079"},{"relation_name":"part_of","term_name":"mesonephric tubule morphogenesis","termid":"GO:0072171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric tubule formation","termid":"GO:0072172"}


id: PBO:0079277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TELO2 interacting protein 1","termid":"PBO:0079277"}


id: FYPO:0002203
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells in which the cell diameter is larger than normal and the cell length is shorter than normal. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:vw","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, stubby cells (obsolete FYPO:0002203)","synonyms":[{"name":"inviable microcolony, stubby vegetative cells","type":"exact"}],"termid":"FYPO:0002203"}


id: GO:1902704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of hexose to acetone.","definition_xrefs":["GOC:mengo_curators","GO_REF:0000093","PMID:18727018","PMID:19539744","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete hexose catabolic process to acetone (obsolete GO:1902704)","synonyms":[{"name":"hexose breakdown to acetone","type":"exact"},{"name":"hexose catabolic process to 2-propanone","type":"exact"},{"name":"hexose catabolism to acetone","type":"exact"},{"name":"hexose degradation to acetone","type":"exact"},{"name":"solventogenesis","type":"broad"}],"termid":"GO:1902704"}


id: FYPO:0005166
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the spatio-temporal pattern of localization of replication forks into nuclear foci is normal (i.e. indistinguishable from wild type). Normally, replication forks appear organized into foci outside the nucleolus in early S phase. As S phase progresses, the number of foci first increases, then decreases, and the remaining foci concentrate within the nucleolus or at the nucleolar periphery. The last replication foci remaining at the end of S phase are one or two large spots at the nucleolar border.","definition_xrefs":["PMID:17304223","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal spatio-temporal regulation of replication fork localization","synonyms":[{"name":"normal replication foci dynamics","type":"related"},{"name":"normal replication focus organization","type":"related"},{"name":"normal spatio-temporal regulation of replication fork localisation","type":"exact"},{"name":"normal spatio-temporal regulation of replication fork localization during mitotic cell cycle","type":"related"},{"name":"normal spatio-temporal regulation of replication fork localization during vegetative growth","type":"exact"},{"name":"normal spatio-temporal replication fork organization","type":"related"}],"termid":"FYPO:0005166"}


id: PBO:0035942
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_myxothiazol","termid":"PBO:0035942"}


id: GO:0052503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of the symbiont calcium-dependent protein kinase pathway during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of defense-related symbiont calcium-dependent protein kinase pathway (obsolete GO:0052503)","synonyms":[{"name":"positive regulation by organism of defense-related symbiont calcium-dependent protein kinase pathway","type":"exact"},{"name":"positive regulation of defense-related symbiont CDPK pathway by organism","type":"exact"}],"termid":"GO:0052503"}


id: MOD:01628
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that forms (2-aminosuccinimidyl)acetic acid by crosslinking either an aspartic acid residue or an asparagine residue with the following glycine residue.","definition_xrefs":["PubMed:10801322","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-aminosuccinimide ring crosslinked residues","termid":"MOD:01944"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2-aminosuccinimidyl)acetic acid","termid":"MOD:01628"}


id: GO:0052446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of symbiont processes resulting in the thickening of its cell walls, occurring as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of defense-related symbiont cell wall thickening (obsolete GO:0052446)","synonyms":[{"name":"modulation by organism of defense-related symbiont cell wall thickening","type":"exact"},{"name":"modulation by organism of symbiont defensive cell wall thickening","type":"related"}],"termid":"GO:0052446"}


id: PR:Q69Z14
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vma9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q69Z14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase subunit e (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.16","synonyms":[{"name":"Spom972h-vma9","type":"exact"},{"name":"V-ATPase subunit e (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump subunit e (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q69Z14"}


id: GO:0052221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of a chemical on, within or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive chemotaxis in environment of other organism involved in symbiotic interaction (obsolete GO:0052221)","synonyms":[{"name":"positive chemotaxis in environment of other organism during symbiotic interaction","type":"related"},{"name":"positive chemotaxis in response to environment of other organism","type":"exact"}],"termid":"GO:0052221"}


id: RO:0002255
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of has developmental contribution from","direct_ancestors":[{"relation_name":"is_a","term_name":"developmentally_succeeded_by","termid":"RO:0002286"},{"relation_name":"is_a","term_name":"has_potential_to_developmentally_contribute_to","termid":"RO:0002385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmentally_contributes_to","termid":"RO:0002255"}


id: PBO:0002570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p150-Glued","termid":"PBO:0002570"}


id: GO:0006557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of S-adenosylmethioninamine, (5-deoxy-5-adenosyl)(3-aminopropyl) methylsulfonium salt.","definition_xrefs":["GOC:mah","MetaCyc:S-ADENOSYLMETHIONINAMINE"],"gene_count":0,"genotype_count":0,"name":"obsolete S-adenosylmethioninamine biosynthetic process (obsolete GO:0006557)","synonyms":[{"name":"S-adenosylmethioninamine anabolism","type":"exact"},{"name":"S-adenosylmethioninamine biosynthesis","type":"exact"},{"name":"S-adenosylmethioninamine formation","type":"exact"},{"name":"S-adenosylmethioninamine synthesis","type":"exact"}],"termid":"GO:0006557"}


id: PBO:0002499
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds d(GTT)n","termid":"PBO:0002499"}


id: GO:0017196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of the N-terminal methionine of proteins to form the derivative N-acetyl-L-methionine.","definition_xrefs":["RESID:AA0049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid acetylation","termid":"GO:0006474"},{"relation_name":"is_a","term_name":"peptidyl-methionine modification","termid":"GO:0018206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"N-terminal peptidyl-methionine acetylation","termid":"GO:0017196"}


id: GO:0002765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately leading to inhibition of an immune response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-regulating signaling pathway","termid":"GO:0002764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"immune response-inhibiting signal transduction","termid":"GO:0002765"}


id: PBO:0046287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EML4 antisense RNA 1","termid":"PBO:0046287"}


id: GO:2000319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T-helper 17 cell differentiation.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T-helper cell differentiation","termid":"GO:0045622"},{"relation_name":"is_a","term_name":"regulation of T-helper 17 type immune response","termid":"GO:2000316"},{"relation_name":"regulates","term_name":"T-helper 17 cell differentiation","termid":"GO:0072539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T-helper 17 cell differentiation","synonyms":[{"name":"regulation of T-helper 17 cell development","type":"related"}],"termid":"GO:2000319"}


id: GO:0060980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell from one site to another that will contribute to the differentiation of an endothelial cell that will form the blood vessels of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in vasculogenesis","termid":"GO:0035441"},{"relation_name":"is_a","term_name":"cell migration involved in heart development","termid":"GO:0060973"},{"relation_name":"part_of","term_name":"vasculogenesis involved in coronary vascular morphogenesis","termid":"GO:0060979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in coronary vasculogenesis","termid":"GO:0060980"}


id: PBO:0083026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleted ORF; does not encode a protein; this ORF was removed when a sequence update created a stop codon after residue 23","termid":"PBO:0083026"}


id: GO:1904071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a presynaptic active zone. The presynaptic active zone is a specialized region of the plasma membrane and cell cortex of a presynaptic neuron; encompasses a region of the plasma membrane where synaptic vesicles dock and fuse, and a specialized cortical cytoskeletal matrix.","definition_xrefs":["PMID:10769383","GO_REF:0000079","GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"presynaptic active zone organization","termid":"GO:1990709"},{"relation_name":"part_of","term_name":"presynapse assembly","termid":"GO:0099054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"presynaptic active zone assembly","synonyms":[{"name":"pre-synaptic active zone assembly","type":"exact"},{"name":"pre-synaptic active zone component assembly","type":"narrow"},{"name":"pre-synaptic active zone component formation","type":"narrow"},{"name":"pre-synaptic active zone formation","type":"exact"},{"name":"presynaptic active zone formation","type":"exact"}],"termid":"GO:1904071"}


id: PBO:0076105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 10","termid":"PBO:0076105"}


id: GO:0003069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which acetylcholine signaling causes vasodilation, resulting in a change in blood pressure.","definition_xrefs":["GOC:mtg_cardio","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of systemic arterial blood pressure","termid":"GO:0003085"},{"relation_name":"is_a","term_name":"vasodilation","termid":"GO:0042311"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by acetylcholine","termid":"GO:0003068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acetylcholine-mediated vasodilation involved in regulation of systemic arterial blood pressure","synonyms":[{"name":"vasodilation by acetylcholine involved in regulation of systemic arterial blood pressure","type":"exact"}],"termid":"GO:0003069"}


id: PBO:0046518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER lipid raft associated 2","termid":"PBO:0046518"}


id: GO:0052404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of symbiont protease activity, the catalysis of the hydrolysis of peptide bonds in a protein. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:dph","GOC:mtg_pamgo_17jul06","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont peptidase activity (obsolete GO:0052404)","synonyms":[{"name":"down regulation by host of symbiont protease activity","type":"narrow"},{"name":"down-regulation by host of symbiont protease activity","type":"narrow"},{"name":"downregulation by host of symbiont protease activity","type":"narrow"},{"name":"inhibition by host of symbiont protease activity","type":"narrow"},{"name":"inhibition of symbiont protease activity","type":"narrow"},{"name":"negative regulation by host of symbiont protease activity","type":"narrow"}],"termid":"GO:0052404"}


id: PBO:0049150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione peroxidase 7","termid":"PBO:0049150"}


id: GO:0032056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of translation as a result of a stimulus indicating the organism is under stress.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation in response to stress","termid":"GO:0043555"},{"relation_name":"is_a","term_name":"positive regulation of translation","termid":"GO:0045727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of translation in response to stress","synonyms":[{"name":"activation of translation in response to stress","type":"narrow"},{"name":"stimulation of translation in response to stress","type":"narrow"},{"name":"up regulation of translation in response to stress","type":"exact"},{"name":"up-regulation of translation in response to stress","type":"exact"},{"name":"upregulation of translation in response to stress","type":"exact"}],"termid":"GO:0032056"}


id: PBO:0054705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2114","termid":"PBO:0054705"}


id: PBO:0073199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEM1 pseudogene 1","termid":"PBO:0073199"}


id: PBO:0067673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 854, pseudogene","termid":"PBO:0067673"}


id: PBO:0063296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily C, 3","termid":"PBO:0063296"}


id: PR:O74831
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A frataxin, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR16821:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frataxin homolog, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.03c","secondary_identifiers":["UniProtKB:O74831"],"synonyms":[{"name":"Spom972h-FXN","type":"exact"}],"termid":"PR:O74831"}


id: PBO:0041822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnosine synthase 1","termid":"PBO:0041822"}


id: GO:0097428
data:
  {"annotated_genes":["SJAG_03913","SJAG_01147","SJAG_03701","SJAG_02895","SJAG_02497","SJAG_04016","SJAG_02474","SJAG_02745","SJAG_02866","SJAG_01417","SJAG_03222","SJAG_03532","SJAG_00040"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96544,113925],"is_not":false,"summary":null,"term":"GO:0097428"},{"annotations":[97667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106034"},{"annotations":[113085,112185,100815,96094,83717,85033,105914,100335,91710,110827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106035"}]},"cv_name":"biological_process","definition":"The transfer of an assembled iron-sulfur cluster from a scaffold protein to an acceptor protein that contributes to the attainment of the full functional capacity of a protein.","definition_xrefs":["PMID:18322036","PMID:21977977","GOC:al","PMID:11939799","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00040":null,"SJAG_01147":null,"SJAG_01417":null,"SJAG_02474":null,"SJAG_02497":null,"SJAG_02745":null,"SJAG_02866":null,"SJAG_02895":null,"SJAG_03222":null,"SJAG_03532":null,"SJAG_03701":null,"SJAG_03913":null,"SJAG_04016":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"protein maturation by iron-sulfur cluster transfer","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097428","terms_by_termid":{"GO:0097428":null,"GO:0106034":null,"GO:0106035":null}}


id: GO:0042712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Male behaviors associated with the care and rearing offspring.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parental behavior","termid":"GO:0060746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"paternal behavior","synonyms":[{"name":"paternal behaviour","type":"exact"}],"termid":"GO:0042712"}


id: PBO:0081963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zona pellucida like domain containing 1","termid":"PBO:0081963"}


id: PBO:0027064
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_localization_phenotype","termid":"PBO:0027064"}


id: PR:O43060
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 3 subunit F that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10540:SF6","OMA:SCHPO03575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit F (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4C3.07","secondary_identifiers":["UniProtKB:O43060"],"synonyms":[{"name":"Spom972h-EIF3F","type":"exact"},{"name":"eIF3f (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43060"}


id: PBO:0048473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosaminyl (N-acetyl) transferase 1","termid":"PBO:0048473"}


id: GO:0006491
data:
  {"annotated_genes":["SJAG_04571","SJAG_03280","SJAG_03535"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83454,109826,114579],"is_not":false,"summary":null,"term":"GO:0006491"}]},"cv_name":"biological_process","definition":"The conversion of N-linked glycan (N = nitrogen) structures from the initially transferred oligosaccharide to a mature form, by the actions of glycosidases and glycosyltransferases. The early processing steps are conserved and play roles in glycoprotein folding and trafficking.","definition_xrefs":["PMID:12736198","ISBN:0879695595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein metabolic process","termid":"GO:0009100"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03280":null,"SJAG_03535":null,"SJAG_04571":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-glycan processing","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0006492"],"synonyms":[{"name":"N-linked glycoprotein maturation","type":"exact"},{"name":"glycoprotein trimming involved in glycoprotein maturation","type":"narrow"}],"termid":"GO:0006491","terms_by_termid":{"GO:0006491":null}}


id: PBO:0051761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin 7","termid":"PBO:0051761"}


id: GO:0009326
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the dehydrogenation of formate to produce carbon dioxide (CO2).","definition_xrefs":["PMID:8566699","PMID:1504073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"formate dehydrogenase complex","termid":"GO:0009326"}


id: GO:0019369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving arachidonic acid, a straight chain fatty acid with 20 carbon atoms and four double bonds per molecule. Arachidonic acid is the all-Z-(5,8,11,14)-isomer.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"},{"relation_name":"is_a","term_name":"icosanoid metabolic process","termid":"GO:0006690"},{"relation_name":"is_a","term_name":"unsaturated fatty acid metabolic process","termid":"GO:0033559"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"arachidonate metabolic process","secondary_identifiers":["Wikipedia:Arachidonic_acid"],"synonyms":[{"name":"arachidonic acid metabolic process","type":"exact"},{"name":"arachidonic acid metabolism","type":"exact"}],"termid":"GO:0019369"}


id: PBO:0004992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Rrp45 (predicted)","termid":"PBO:0004992"}


id: PBO:0083841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exo-1,3-beta-glucanase; involved in cell wall beta-glucan assembly; may be anchored to the plasma membrane via a glycosylphosphatidylinositol (GPI) anchor","termid":"PBO:0083841"}


id: FYPO:0001977
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of galactomannan measured in the cell wall is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell wall polysaccharide level","termid":"FYPO:0004859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0002946","FYPO:0000002"],"is_obsolete":false,"name":"increased cell wall galactomannan level","synonyms":[{"name":"increased cell wall galactomannan accumulation","type":"related"},{"name":"increased cell wall galactomannan level during mitotic cell cycle","type":"related"},{"name":"increased cell wall galactomannan level during vegetative growth","type":"exact"}],"termid":"FYPO:0001977"}


id: PBO:0091297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate-glucose-glycolipid alpha-glucosyltransferase Alg10","termid":"PBO:0091297"}


id: GO:0070385
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains beta-glucuronidase and the carboxyl esterase egasyn; formation of the complex causes beta-glucuronidase to be retained in the endoplasmic reticulum.","definition_xrefs":["PMID:7744842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005783","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"egasyn-beta-glucuronidase complex","termid":"GO:0070385"}


id: GO:0098037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The encapsulation of the viral DNA genome within the capsid, which proceeds via cleavage of the viral DNA at specific sites to produce 5' protruding ends.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral DNA genome packaging via site-specific sequence recognition","termid":"GO:0098035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral DNA genome packaging, 5' extended cos packaging","termid":"GO:0098037"}


id: FYPO:0007326
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial tRNA 3'-end processing is decreased. In mitochondrial tRNA 3'-end processing, the 3' end of a mitochondrial pre-tRNA molecule is converted to that of a mature mitochondrial tRNA.","definition_xrefs":["GO:0006396","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial RNA 3'-end processing","termid":"FYPO:0004956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000294","FYPO:0001320","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"decreased mitochondrial tRNA 3'-end processing","synonyms":[{"name":"decreased mitochondrial tRNA 3'-end processing during mitotic cell cycle","type":"related"},{"name":"decreased mitochondrial tRNA 3'-end processing during vegetative growth","type":"exact"},{"name":"decreased mitochondrial transfer RNA 3'-end processing","type":"exact"},{"name":"reduced mitochondrial tRNA 3'-end processing","type":"exact"}],"termid":"FYPO:0007326"}


id: GO:0050021
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arabinono-1,4-lactone + H2O = L-arabinonate + H+.","definition_xrefs":["RHEA:16217","EC:3.1.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"L-arabinonolactonase activity","secondary_identifiers":["KEGG_REACTION:R02526","MetaCyc:L-ARABINONOLACTONASE-RXN"],"synonyms":[{"name":"L-arabinono-1,4-lactone lactonohydrolase activity","type":"related"}],"termid":"GO:0050021"}


id: GO:0002909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of peripheral B cell deletion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of peripheral tolerance induction","termid":"GO:0002659"},{"relation_name":"is_a","term_name":"negative regulation of B cell mediated immunity","termid":"GO:0002713"},{"relation_name":"is_a","term_name":"negative regulation of B cell deletion","termid":"GO:0002868"},{"relation_name":"is_a","term_name":"regulation of peripheral B cell deletion","termid":"GO:0002908"},{"relation_name":"negatively_regulates","term_name":"peripheral B cell deletion","termid":"GO:0002454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peripheral B cell deletion","synonyms":[{"name":"down regulation of peripheral B cell deletion","type":"exact"},{"name":"down-regulation of peripheral B cell deletion","type":"exact"},{"name":"downregulation of peripheral B cell deletion","type":"exact"},{"name":"inhibition of peripheral B cell deletion","type":"narrow"}],"termid":"GO:0002909"}


id: PBO:0039185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A-kinase anchoring protein 14","termid":"PBO:0039185"}


id: GO:0072553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a terminal button. A terminal button is the terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"presynapse organization","termid":"GO:0099172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"terminal button organization","synonyms":[{"name":"bouton organization","type":"exact"},{"name":"presynaptic bouton organization","type":"exact"},{"name":"synaptic bouton organization","type":"exact"},{"name":"terminal bouton organization","type":"exact"},{"name":"terminal button organisation","type":"exact"}],"termid":"GO:0072553"}


id: PBO:0017534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possible chromosome segregation protein (predicted)","termid":"PBO:0017534"}


id: GO:0018287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into a 3Fe-4S iron-sulfur cluster via tris-L-cysteinyl triiron tetrasulfide.","definition_xrefs":["RESID:AA0139"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into iron-sulfur cluster via tris-L-cysteinyl triiron tetrasulfide (obsolete GO:0018287)","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via tris-L-cysteinyl triiron tetrasulphide","type":"exact"}],"termid":"GO:0018287"}


