# terms

id: PBO:0079888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine phosphorylase 1","termid":"PBO:0079888"}


id: GO:0022026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a epidermal growth factor receptor binding to one of its physiological ligands that contributes to the commitment of a neuroblast to a neuronal fate. The neuron will reside in the forebrain.","definition_xrefs":["GOC:cls","GOC:dph","GOC:dgh","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal growth factor receptor signaling pathway","termid":"GO:0007173"},{"relation_name":"part_of","term_name":"commitment of multipotent stem cells to neuronal lineage in forebrain","termid":"GO:0021898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"epidermal growth factor signaling pathway involved in forebrain neuron fate commitment","synonyms":[{"name":"epidermal growth factor signalling pathway involved in forebrain neuron fate commitment","type":"exact"}],"termid":"GO:0022026"}


id: GO:0120524
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain 2,3-saturated fatty acyl-CoA + O2 = a long-chain (2E)-enoyl-CoA + H2O2.","definition_xrefs":["RHEA:78851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA oxidase activity","termid":"GO:0003997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"long-chain fatty acyl-CoA oxidase activity","termid":"GO:0120524"}


id: GO:1901876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcium ion binding.","definition_xrefs":["GOC:rl","GOC:BHF","GOC:TermGenie","PMID:16432188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of binding","termid":"GO:0051098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of calcium ion binding","synonyms":[{"name":"regulation of calcium ion storage activity","type":"related"}],"termid":"GO:1901876"}


id: PBO:0001870
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU family","termid":"PBO:0001870"}


id: PBO:0040992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bolA family member 2 pseudogene 2","termid":"PBO:0040992"}


id: GO:0019099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The determination of sex and sexual phenotype in a female organism's germ line.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary sex determination, germ-line","termid":"GO:0007542"},{"relation_name":"is_a","term_name":"germ-line sex determination","termid":"GO:0018992"},{"relation_name":"is_a","term_name":"female sex determination","termid":"GO:0030237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female germ-line sex determination","secondary_identifiers":["GO:0007544"],"synonyms":[{"name":"sex determination, female germ-line determination","type":"exact"}],"termid":"GO:0019099"}


id: GO:0043102
data:
  {"annotated_genes":["SJAG_03614","SJAG_01404","SJAG_00419","SJAG_03881","SJAG_02689","SJAG_02293","SJAG_00309","SJAG_04953"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91618,96084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990355"},{"annotations":[108581,103131,85807,95092,88681,96741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019509"},{"annotations":[95093,88682,103132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019284"}]},"cv_name":"biological_process","definition":"Any process which produces an amino acid from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid biosynthetic process","termid":"GO:0008652"},{"relation_name":"is_a","term_name":"cellular metabolic compound salvage","termid":"GO:0043094"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00309":null,"SJAG_00419":null,"SJAG_01404":null,"SJAG_02293":null,"SJAG_02689":null,"SJAG_03614":null,"SJAG_03881":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"amino acid salvage","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043102","terms_by_termid":{"GO:0019284":null,"GO:0019509":null,"GO:1990355":null}}


id: PBO:0043422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cornifelin","termid":"PBO:0043422"}


id: SOFP:Note
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"A GFF3 Note attribute","definition_xrefs":["so:sjc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Note","termid":"SOFP:Note"}


id: SO:0001240
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The region of a gene from the 5' most TSS to the 3' TSS.","definition_xrefs":["BBOP:nw"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001240 TSS_region (obsolete SO:0001240)","synonyms":[{"name":"TSS region","type":"exact"}],"termid":"SO:0001240"}


id: PBO:0062982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudoautosomal boundary region, Y-linked","termid":"PBO:0062982"}


id: PBO:0077576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and immunoglobulin domain containing 1","termid":"PBO:0077576"}


id: GO:1900053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of retinoic acid biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of hormone metabolic process","termid":"GO:0032351"},{"relation_name":"is_a","term_name":"negative regulation of isoprenoid metabolic process","termid":"GO:0045827"},{"relation_name":"is_a","term_name":"negative regulation of vitamin metabolic process","termid":"GO:0046137"},{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"is_a","term_name":"regulation of retinoic acid biosynthetic process","termid":"GO:1900052"},{"relation_name":"negatively_regulates","term_name":"retinoic acid biosynthetic process","termid":"GO:0002138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006766"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281","GO:0006766"],"is_obsolete":false,"name":"negative regulation of retinoic acid biosynthetic process","synonyms":[{"name":"down regulation of retinoic acid anabolic process","type":"exact"},{"name":"down regulation of retinoic acid biosynthetic process","type":"related"},{"name":"down-regulation of retinoic acid anabolic process","type":"exact"},{"name":"down-regulation of retinoic acid biosynthetic process","type":"related"},{"name":"downregulation of retinoic acid anabolic process","type":"exact"},{"name":"downregulation of retinoic acid biosynthetic process","type":"related"},{"name":"inhibition of retinoic acid anabolic process","type":"exact"},{"name":"inhibition of retinoic acid biosynthetic process","type":"related"},{"name":"negative regulation of retinoic acid anabolic process","type":"exact"}],"termid":"GO:1900053"}


id: PBO:0003830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ksp1 (predicted)","termid":"PBO:0003830"}


id: PBO:0055854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRP2BP antisense RNA 1","termid":"PBO:0055854"}


id: FYPO:0004779
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of farnesyltranstransferase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000257"],"is_obsolete":false,"name":"normal farnesyltranstransferase activity","termid":"FYPO:0004779"}


id: PBO:0068956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 200, pseudogene","termid":"PBO:0068956"}


id: GO:0000504
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A multisubunit complex that recognizes and unfolds ubiquitinated proteins, and translocates them to the core complex in an ATP dependent manner. As in, but not restricted to, the taxon Bacteria (Bacteria, ncbi_taxonomy_id:2).","definition_xrefs":["GOC:rb"],"gene_count":0,"genotype_count":0,"name":"obsolete proteasome regulatory particle (sensu Bacteria) (obsolete GO:0000504)","synonyms":[{"name":"26S proteasome","type":"narrow"},{"name":"proteasome regulatory particle (sensu Bacteria)","type":"exact"}],"termid":"GO:0000504"}


id: GO:0048056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire the specialized features of R3 and R4 photoreceptors. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor cell differentiation","termid":"GO:0001751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"R3/R4 cell differentiation","termid":"GO:0048056"}


id: PBO:0011429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase Tgs1 (predicted)","termid":"PBO:0011429"}


id: GO:0018772
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4,6-trioxoheptanoate + H2O = acetylpyruvate + acetate.","definition_xrefs":["UM-BBD_reactionID:r0094","MetaCyc:R306-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"trioxoheptanoate hydrolase activity","termid":"GO:0018772"}


id: PBO:0078611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 64B","termid":"PBO:0078611"}


id: PBO:0050662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 1B","termid":"PBO:0050662"}


id: PBO:0059826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial transcription termination factor 1","termid":"PBO:0059826"}


id: PBO:0013777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mst2/NuA4 histone acetyltransferase complex subunit Eaf6","termid":"PBO:0013777"}


id: GO:0001129
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a member of the class of TATA-binding proteins (TBP), including any of the TBP-related factors (TRFs), to facilitate the aggregation, arrangement and bonding together of proteins on RNA polymerase II promoter DNA to form the transcriptional preinitiation complex (PIC), the formation of which is a prerequisite for transcription by RNA polymerase.","definition_xrefs":["PMID:16858867","GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase II transcription factor activity, TBP-class protein binding, involved in preinitiation complex assembly (obsolete GO:0001129)","synonyms":[{"name":"TATA-binding protein binding RNA polymerase II transcription factor activity involved in preinitiation complex assembly","type":"narrow"},{"name":"TBP-class protein binding RNA polymerase II transcription factor activity involved in preinitiation complex assembly","type":"exact"}],"termid":"GO:0001129"}


id: PBO:0073407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 10","termid":"PBO:0073407"}


id: PBO:0058784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7153","termid":"PBO:0058784"}


id: PBO:0087111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal stalk protein P1 alpha; involved in the interaction between translational elongation factors and the ribosome; free (non-ribosomal) P1 stimulates the phosphorylation of the eIF2 alpha subunit (Sui2p) by Gcn2p; accumulation of P1 in the cytoplasm is regulated by phosphorylation and interaction with the P2 stalk component","termid":"PBO:0087111"}


id: PBO:0066647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras and Rab interactor 1","termid":"PBO:0066647"}


id: PBO:0050202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 19","termid":"PBO:0050202"}


id: PBO:0001867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine hydroxymethyltransferase (predicted)","termid":"PBO:0001867"}


id: PBO:0090570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit Tho7","termid":"PBO:0090570"}


id: PBO:0058882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10398","termid":"PBO:0058882"}


id: CHEBI:32035
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium hydroxide","termid":"CHEBI:32035"}


id: GO:0055112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The splitting or migration of one epithelial sheet into two involved in the process of deuterostomic gastrulation.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delamination","termid":"GO:0060232"},{"relation_name":"part_of","term_name":"gastrulation with mouth forming second","termid":"GO:0001702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"delamination involved in gastrulation with mouth forming second","termid":"GO:0055112"}


id: GO:0018684
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1R,4R)-bornane-2,5-dione + FMNH2 + O2 = (1R,4R)-5-oxo-1,2-campholide + FMN + H+ + H2O.","definition_xrefs":["PMID:3944058","PMID:8515237","RHEA:34415"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"2,5-diketocamphane 1,2-monooxygenase","secondary_identifiers":["MetaCyc:R543-RXN","EC:1.14.14.108","UM-BBD_enzymeID:r0428"],"synonyms":[{"name":"(+)-camphor,reduced-rubredoxin:oxygen oxidoreductase (1,2-lactonizing)","type":"related"},{"name":"2,5-diketocamphane lactonizing enzyme activity","type":"related"},{"name":"camphor 1,2-monooxygenase activity","type":"exact"},{"name":"camphor ketolactonase I activity","type":"related"}],"termid":"GO:0018684"}


id: GO:0005973
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete fibrinogen beta chain (obsolete GO:0005973)","synonyms":[{"name":"fibrinogen beta chain","type":"exact"}],"termid":"GO:0005973"}


id: PBO:0026920
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H4-K8_acetylation","termid":"PBO:0026920"}


id: GO:0030131
data:
  {"annotated_genes":["SJAG_04565","SJAG_00379","SJAG_02805","SJAG_01809","SJAG_04931","SJAG_01167","SJAG_00104","SJAG_00800","SJAG_04609"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[107642],"is_not":false,"summary":null,"term":"GO:0030131"},{"annotations":[97208,109153,115056,108932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030121"},{"annotations":[92323,107739,104461,107799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030122"}]},"cv_name":"cellular_component","definition":"A membrane coat adaptor complex that links clathrin to a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AP-type membrane coat adaptor complex","termid":"GO:0030119"},{"relation_name":"part_of","term_name":"clathrin coat","termid":"GO:0030118"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00379":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_01809":null,"SJAG_02805":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_04931":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"clathrin adaptor complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030131","terms_by_termid":{"GO:0030121":null,"GO:0030122":null,"GO:0030131":null}}


id: PBO:0108933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MND1 pseudogene 1","termid":"PBO:0108933"}


id: PBO:0063466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet derived growth factor receptor like 2, pseudogene","termid":"PBO:0063466"}


id: GO:0052324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation, as part of the organization and biogenesis of the cell wall.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellulose biosynthetic process","termid":"GO:0030244"},{"relation_name":"is_a","term_name":"cell wall beta-glucan biosynthetic process","termid":"GO:0034410"},{"relation_name":"is_a","term_name":"plant-type cell wall cellulose metabolic process","termid":"GO:0052541"},{"relation_name":"part_of","term_name":"plant-type cell wall biogenesis","termid":"GO:0009832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0005975","GO:0071554"],"is_obsolete":false,"name":"plant-type cell wall cellulose biosynthetic process","synonyms":[{"name":"cell wall cellulose biosynthesis","type":"exact"},{"name":"cellulose biosynthesis during cell wall biosynthesis","type":"related"}],"termid":"GO:0052324"}


id: PBO:0072110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S13 pseudogene 8","termid":"PBO:0072110"}


id: PBO:0085221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Palmitoyltransferase with autoacylation activity; required for palmitoylation of amino acid permeases containing a C-terminal Phe-Trp-Cys site; required for modification of Chs3p; member of the DHHC family of putative palmitoyltransferases","termid":"PBO:0085221"}


id: PBO:0000354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear membrane protein involved in karyogamy Tht1","termid":"PBO:0000354"}


id: GO:0008742
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-ribulose 5-phosphate = D-xylulose 5-phosphate.","definition_xrefs":["RHEA:22368","EC:5.1.3.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-ribulose-phosphate 4-epimerase activity","secondary_identifiers":["KEGG_REACTION:R05850","MetaCyc:RIBULPEPIM-RXN"],"synonyms":[{"name":"AraD","type":"related"},{"name":"L-Ru5P","type":"related"},{"name":"L-ribulose 5-phosphate 4-epimerase activity","type":"related"},{"name":"L-ribulose-5-phosphate 4-epimerase","type":"broad"},{"name":"L-ru5P activity","type":"related"},{"name":"phosphoribulose isomerase activity","type":"related"},{"name":"ribulose phosphate 4-epimerase activity","type":"related"}],"termid":"GO:0008742"}


id: GO:0052316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phytoalexins, any of a range of substances produced by plants as part of their defense response.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin catabolic process","termid":"GO:0009407"},{"relation_name":"is_a","term_name":"phytoalexin metabolic process","termid":"GO:0052314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044248","GO:0019748","GO:0098754","GO:0008150"],"is_obsolete":false,"name":"phytoalexin catabolic process","synonyms":[{"name":"phytoalexin catabolism","type":"exact"}],"termid":"GO:0052316"}


id: GO:1902256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of apoptotic process involved in outflow tract morphogenesis.","definition_xrefs":["PMID:16839542","GOC:dph","GOC:mtg_apoptosis","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in morphogenesis","termid":"GO:1902337"},{"relation_name":"regulates","term_name":"apoptotic process involved in outflow tract morphogenesis","termid":"GO:0003275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of apoptotic process involved in outflow tract morphogenesis","synonyms":[{"name":"regulation of apoptosis involved in outflow tract morphogenesis","type":"narrow"}],"termid":"GO:1902256"}


id: GO:1902013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving poly(glycerol phosphate) teichoic acid.","definition_xrefs":["PMID:11882717","GOC:TermGenie","UniPathway:UPA00827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teichoic acid metabolic process","termid":"GO:0046374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly(glycerol phosphate) teichoic acid metabolic process","synonyms":[{"name":"poly(glycerol phosphate) teichoic acid metabolism","type":"exact"}],"termid":"GO:1902013"}


id: PR:O94413
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribose-phosphate pyrophosphokinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose-phosphate pyrophosphokinase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1620.06c","secondary_identifiers":["UniProtKB:O94413"],"synonyms":[{"name":"Spom972h-prs","type":"exact"},{"name":"phosphoribosyl pyrophosphate synthase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94413"}


id: PBO:0070841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 20","termid":"PBO:0070841"}


id: PBO:0045907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand calcium binding domain 5","termid":"PBO:0045907"}


id: PBO:0002044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR44 family","termid":"PBO:0002044"}


id: PBO:0065472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase, 10 pseudogene 3","termid":"PBO:0065472"}


id: PBO:0078216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 7-9","termid":"PBO:0078216"}


id: PR:O94378
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A MAP7 domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1604.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.12","secondary_identifiers":["UniProtKB:O94378"],"synonyms":[{"name":"Spom972h-MAP7D1","type":"exact"}],"termid":"PR:O94378"}


id: PBO:0039831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine-fifty homeobox pseudogene 2","termid":"PBO:0039831"}


id: FYPO:0003056
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the cell does not contain a detectable Mei2 nuclear dot complex.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"},{"relation_name":"is_a","term_name":"altered level of macromolecular complex","termid":"FYPO:0007316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"Mei2 nuclear dot absent from cell","synonyms":[{"name":"Mei2 nuclear dot absent from cell during meiotic cell cycle","type":"exact"},{"name":"Mei2 nuclear dot complex absent from cell","type":"exact"},{"name":"absence of Mei2 dot","type":"exact"},{"name":"absent Mei2 nuclear dot","type":"exact"},{"name":"meiRNA nuclear dot absent from cell","type":"related"}],"termid":"FYPO:0003056"}


id: GO:0120026
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A host cell membrane projection with related cytoskeletal components at the trailing edge of a cell in the process of migrating or being activated, found on the opposite side of the cell from the leading edge or immunological synapse, respectively.","definition_xrefs":["PMID:24965475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell projection","termid":"GO:0044157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell uropod","synonyms":[{"name":"host cell uropodium","type":"exact"}],"termid":"GO:0120026"}


id: PBO:0075651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPRY domain containing 7 pseudogene 1","termid":"PBO:0075651"}


id: PR:Q09677
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A modulator of drug activity B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00053","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C5H10.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5H10.05c","secondary_identifiers":["UniProtKB:Q09677"],"synonyms":[{"name":"Spom972h-mdaB","type":"exact"}],"termid":"PR:Q09677"}


id: PBO:0082130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Actin assembly factor; C-terminal WCA domain activates Arp2/3 complex-mediated nucleation of branched actin filaments, polyproline domain nucleates actin filaments independent of Arp2/3; mutants are defective in endocytosis, bud site selection, cytokinesis; human homolog WAS (Wiskott-Aldrich Syndrome) implicated in severe immunodeficiency; human WAS complements yeast null mutant, but only in presence of WIPF1, which mediates localization of WAS to cortical patches","termid":"PBO:0082130"}


id: PBO:0000740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho family GTPase Rho3","termid":"PBO:0000740"}


id: PBO:0083140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps 3' end of ORF FKS3/YMR306W","termid":"PBO:0083140"}


id: GO:0032805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of low-density lipoprotein particle receptors.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of low-density lipoprotein particle receptor catabolic process","termid":"GO:0032803"},{"relation_name":"is_a","term_name":"positive regulation of protein catabolic process","termid":"GO:0045732"},{"relation_name":"is_a","term_name":"positive regulation of receptor catabolic process","termid":"GO:2000646"},{"relation_name":"positively_regulates","term_name":"low-density lipoprotein particle receptor catabolic process","termid":"GO:0032802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0030163"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0030163","GO:0044248"],"is_obsolete":false,"name":"positive regulation of low-density lipoprotein particle receptor catabolic process","synonyms":[{"name":"activation of low-density lipoprotein receptor catabolic process","type":"narrow"},{"name":"positive regulation of low-density lipoprotein receptor breakdown","type":"exact"},{"name":"positive regulation of low-density lipoprotein receptor catabolic process","type":"exact"},{"name":"positive regulation of low-density lipoprotein receptor catabolism","type":"exact"},{"name":"positive regulation of low-density lipoprotein receptor degradation","type":"exact"},{"name":"stimulation of low-density lipoprotein receptor catabolic process","type":"narrow"},{"name":"up regulation of low-density lipoprotein receptor catabolic process","type":"exact"},{"name":"up-regulation of low-density lipoprotein receptor catabolic process","type":"exact"},{"name":"upregulation of low-density lipoprotein receptor catabolic process","type":"exact"}],"termid":"GO:0032805"}


id: GO:0075178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its calcium or calmodulin-mediated signal transduction as a result of detecting host molecules in, on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of calcium or calmodulin-mediated signal transduction in response to host (obsolete GO:0075178)","synonyms":[{"name":"positive regulation of symbiont Ca++ or calmodulin-mediated signal transduction in response to host","type":"exact"},{"name":"positive regulation of symbiont calcium or calmodulin-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075178"}


id: PBO:0043665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q8B","termid":"PBO:0043665"}


id: PBO:0085318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol 3-phosphate binding protein; formation of a distinct complex with TORC1, induced by glutamine in dose-dependent manner, results in TORC1 activation, suggesting dual roles as both a glutamine sensor and a direct TORC1 activator; involved in leucine- and glutamine-responsive TORC1 activation, independent of the Gtr/Ego pathway; related to human PLEKHF1, a lysosomal membrane permeabilization regulator; contains a PtdIns3P binding FYVE domain; similar to Fab1p and Vps27p","termid":"PBO:0085318"}


id: GO:0045058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which T cells that express T cell receptors that are restricted by self MHC protein complexes and tolerant to self antigens are selected for further maturation.","definition_xrefs":["PMID:12414722","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"part_of","term_name":"T cell differentiation","termid":"GO:0030217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell selection","secondary_identifiers":["Wikipedia:Thymocyte"],"synonyms":[{"name":"T lymphocyte selection","type":"exact"},{"name":"T-cell selection","type":"exact"},{"name":"T-lymphocyte selection","type":"exact"}],"termid":"GO:0045058"}


id: GO:0003077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that reduces the rate of diuresis. Diuresis is the process of renal water excretion.","definition_xrefs":["GOC:mtg_cardio"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of diuresis (obsolete GO:0003077)","synonyms":[{"name":"negative regulation of diuresis","type":"exact"}],"termid":"GO:0003077"}


id: PATO:0000726
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000726 autonomic function value (obsolete PATO:0000726)","termid":"PATO:0000726"}


id: GO:0097244
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a flavonol, a flavonoid that contains a 3-hydroxy-2-phenylchromen-4-one backbone.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"flavonoid binding","termid":"GO:0097243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"flavonol binding","termid":"GO:0097244"}


id: GO:0033812
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: succinyl-CoA + acetyl-CoA = CoA + 3-oxoadipyl-CoA.","definition_xrefs":["RHEA:19481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyl-CoA C-acyltransferase activity","termid":"GO:0003988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"3-oxoadipyl-CoA thiolase activity","secondary_identifiers":["MetaCyc:RXN-3641","EC:2.3.1.174"],"synonyms":[{"name":"succinyl-CoA:acetyl-CoA C-succinyltransferase activity","type":"related"}],"termid":"GO:0033812"}


id: GO:0061169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of hair follicle placode formation, the developmental process in which a hair placode forms. An hair follicle placode is a thickening of the ectoderm that will give rise to the hair follicle bud.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of hair follicle placode formation","termid":"GO:0061168"},{"relation_name":"positively_regulates","term_name":"hair follicle placode formation","termid":"GO:0060789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hair placode formation","termid":"GO:0061169"}


id: PBO:0050643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor Y-linked 8, pseudogene","termid":"PBO:0050643"}


id: GO:0034799
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: TNP dihydride Meisenheimer complex (aci form) = TNP dihydride Meisenheimer complex (nitro form).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydride TNP tautomerase activity (obsolete GO:0034799)","termid":"GO:0034799"}


id: GO:1990905
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small, flexible, finger-like projection of cytoplasm containing an array of microtubles and located near the flagellar pores in some photosynthetic as well as nonphotosynthetic dinoflagellate species. Its functions are not fully understood, but it has been associated with feeding behavior (phagotrophy).","definition_xrefs":["GOC:at","PMID:1480107","Wikipedia:Dinoflagellate"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dinoflagellate peduncle","termid":"GO:1990905"}


id: PBO:0078199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 6-1","termid":"PBO:0078199"}


id: FYPO:0000589
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the rate, or speed, of ascospore formation is increased, i.e. sporulation takes place more rapidly than in wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation","termid":"FYPO:0000121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0000121","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased rate of sporulation","synonyms":[{"name":"increased rate of ascospore formation","type":"exact"},{"name":"sporulation: increased rate","type":"related"}],"termid":"FYPO:0000589"}


id: PBO:0067899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 201","termid":"PBO:0067899"}


id: GO:0033141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the phosphorylation of a serine residue of a STAT (Signal Transducer and Activator of Transcription) protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peptidyl-serine phosphorylation","termid":"GO:0033138"},{"relation_name":"is_a","term_name":"regulation of peptidyl-serine phosphorylation of STAT protein","termid":"GO:0033139"},{"relation_name":"positively_regulates","term_name":"serine phosphorylation of STAT protein","termid":"GO:0042501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of peptidyl-serine phosphorylation of STAT protein","secondary_identifiers":["GO:1903263"],"synonyms":[{"name":"activation of serine phosphorylation of STAT3 protein","type":"narrow"},{"name":"positive regulation of serine phosphorylation of STAT3 protein","type":"narrow"},{"name":"up regulation of serine phosphorylation of STAT3 protein","type":"narrow"},{"name":"up-regulation of serine phosphorylation of STAT3 protein","type":"narrow"},{"name":"upregulation of serine phosphorylation of STAT3 protein","type":"narrow"}],"termid":"GO:0033141"}


id: PR:O59801
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ski2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase C550.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC550.03c","synonyms":[{"name":"Spom972h-ski2","type":"exact"}],"termid":"PR:O59801"}


id: FYPO:0005378
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which spindle pole body organization is normal (i.e. indistinguishable from wild type). Spindle pole body organization is a process that results in the assembly, arrangement of constituent parts, or disassembly of the spindle pole body (SPB).","definition_xrefs":["PomBase:mah","GO:0051300"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal spindle pole body organization","synonyms":[{"name":"normal SPB organization","type":"exact"},{"name":"normal spindle pole body organisation","type":"exact"}],"termid":"FYPO:0005378"}


id: PBO:0041133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain containing 16","termid":"PBO:0041133"}


id: GO:0060759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of a response to cytokine stimulus.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to cytokine stimulus","termid":"GO:0060759"}


id: PBO:0086221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that forms a complex with the Sit4p protein phosphatase; required for Sit4p function; member of a family of similar proteins including Sap4p, Sap155p, and Sap185p; SAP190 has a paralog, SAP185, that arose from the whole genome duplication","termid":"PBO:0086221"}


id: GO:1901347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of secondary cell wall biogenesis.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell wall organization or biogenesis","termid":"GO:1903339"},{"relation_name":"is_a","term_name":"regulation of secondary cell wall biogenesis","termid":"GO:2000652"},{"relation_name":"negatively_regulates","term_name":"plant-type secondary cell wall biogenesis","termid":"GO:0009834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0044085","GO:0071554","GO:0008150"],"is_obsolete":false,"name":"negative regulation of secondary cell wall biogenesis","synonyms":[{"name":"down regulation of cellulose and pectin-containing secondary cell wall biogenesis","type":"exact"},{"name":"down regulation of plant-type secondary cell wall biogenesis","type":"exact"},{"name":"down regulation of secondary cell wall anabolism","type":"broad"},{"name":"down regulation of secondary cell wall biogenesis","type":"exact"},{"name":"down regulation of secondary cell wall biosynthetic process","type":"broad"},{"name":"down regulation of secondary cell wall formation","type":"broad"},{"name":"down regulation of secondary cell wall synthesis","type":"broad"},{"name":"down-regulation of cellulose and pectin-containing secondary cell wall biogenesis","type":"exact"},{"name":"down-regulation of plant-type secondary cell wall biogenesis","type":"exact"},{"name":"down-regulation of secondary cell wall anabolism","type":"broad"},{"name":"down-regulation of secondary cell wall biogenesis","type":"exact"},{"name":"down-regulation of secondary cell wall biosynthetic process","type":"broad"},{"name":"down-regulation of secondary cell wall formation","type":"broad"},{"name":"down-regulation of secondary cell wall synthesis","type":"broad"},{"name":"downregulation of cellulose and pectin-containing secondary cell wall biogenesis","type":"exact"},{"name":"downregulation of plant-type secondary cell wall biogenesis","type":"exact"},{"name":"downregulation of secondary cell wall anabolism","type":"broad"},{"name":"downregulation of secondary cell wall biogenesis","type":"exact"},{"name":"downregulation of secondary cell wall biosynthetic process","type":"broad"},{"name":"downregulation of secondary cell wall formation","type":"broad"},{"name":"downregulation of secondary cell wall synthesis","type":"broad"},{"name":"inhibition of cellulose and pectin-containing secondary cell wall biogenesis","type":"exact"},{"name":"inhibition of plant-type secondary cell wall biogenesis","type":"exact"},{"name":"inhibition of secondary cell wall anabolism","type":"broad"},{"name":"inhibition of secondary cell wall biogenesis","type":"narrow"},{"name":"inhibition of secondary cell wall biosynthetic process","type":"broad"},{"name":"inhibition of secondary cell wall formation","type":"broad"},{"name":"inhibition of secondary cell wall synthesis","type":"broad"},{"name":"negative regulation of cellulose and pectin-containing secondary cell wall biogenesis","type":"exact"},{"name":"negative regulation of plant-type secondary cell wall biogenesis","type":"exact"},{"name":"negative regulation of secondary cell wall anabolism","type":"broad"},{"name":"negative regulation of secondary cell wall biosynthetic process","type":"broad"},{"name":"negative regulation of secondary cell wall formation","type":"broad"},{"name":"negative regulation of secondary cell wall synthesis","type":"broad"}],"termid":"GO:1901347"}


id: GO:0141043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont avoids recognition by host's innate immune response by altering, concealing or destroying a conserved symbiont molecule recognized by the host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:22131330","PMID:29101229","PMID:15014080","PMID:26502908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"evasion of host immune response","termid":"GO:0042783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated evasion of host innate immune response","synonyms":[{"name":"evasion of host innate immune recognition","type":"related"},{"name":"evasion of host innate immune response","type":"exact"}],"termid":"GO:0141043"}


id: PBO:0045444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydropyrimidine dehydrogenase","termid":"PBO:0045444"}


id: PBO:0061810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 centriole and centriolar satellite protein","termid":"PBO:0061810"}


id: GO:1900499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of butyryl-CoA catabolic process to butanol.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular catabolic process","termid":"GO:0031331"},{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of fatty acid metabolic process","termid":"GO:0045923"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of phosphate metabolic process","termid":"GO:0045937"},{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"is_a","term_name":"positive regulation of lipid catabolic process","termid":"GO:0050996"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"regulation of butyryl-CoA catabolic process to butanol","termid":"GO:1900497"},{"relation_name":"is_a","term_name":"positive regulation of alcohol biosynthetic process","termid":"GO:1902932"},{"relation_name":"positively_regulates","term_name":"butyryl-CoA catabolic process to butanol","termid":"GO:0044582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0006629","GO:0055086","GO:0006790","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of butyryl-CoA catabolic process to butanol","synonyms":[{"name":"activation of butyryl-CoA catabolic process to butanol","type":"narrow"},{"name":"activation of butyryl-CoA catabolism to butanol","type":"exact"},{"name":"positive regulation of butyryl-CoA catabolism to butanol","type":"exact"},{"name":"up regulation of butyryl-CoA catabolic process to butanol","type":"exact"},{"name":"up regulation of butyryl-CoA catabolism to butanol","type":"exact"},{"name":"up-regulation of butyryl-CoA catabolic process to butanol","type":"exact"},{"name":"up-regulation of butyryl-CoA catabolism to butanol","type":"exact"},{"name":"upregulation of butyryl-CoA catabolic process to butanol","type":"exact"},{"name":"upregulation of butyryl-CoA catabolism to butanol","type":"exact"}],"termid":"GO:1900499"}


id: PBO:0088007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type 2C serine/threonine protein phosphatase (PP2C); alternatively spliced to create two mRNA isoforms; protein from spliced form localizes to the mitochondria while the one from the unspliced form is localized to the nuclear envelope; activates coenzyme Q6 biosynthesis by dephosphorylation of demethoxy-Q6 hydroxylase Coq7p","termid":"PBO:0088007"}


id: GO:0046908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the spontaneous (nonenzymatic) formation of crystals in a solution, for example, calcium oxalate crystals in urine.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of crystal formation (obsolete GO:0046908)","synonyms":[{"name":"negative regulation of crystal formation","type":"exact"},{"name":"negative regulation of mineralization","type":"related"}],"termid":"GO:0046908"}


id: PBO:0091745
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPBC18H10.16 was previously designated as can1","termid":"PBO:0091745"}


id: PBO:0044248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUB and zona pellucida like domains 1","termid":"PBO:0044248"}


id: PBO:0075378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 15","termid":"PBO:0075378"}


id: GO:0033815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3 malonyl-CoA + benzoyl-CoA = 4 CoA + 3,5-dihydroxybiphenyl + 4 CO2.","definition_xrefs":["EC:2.3.1.177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"biphenyl synthase activity","secondary_identifiers":["RHEA:22292","MetaCyc:2.3.1.177-RXN"],"synonyms":[{"name":"BIS","type":"related"},{"name":"malonyl-CoA:benzoyl-CoA malonyltransferase activity","type":"related"}],"termid":"GO:0033815"}


id: PBO:0045301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 3","termid":"PBO:0045301"}


id: GO:0051410
data:
  {"annotated_genes":["SJAG_03288","SJAG_04063"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83444,98315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070458"}]},"cv_name":"biological_process","definition":"Any process that reduces or removes the toxicity of nitrogenous compounds which are dangerous or toxic. This includes the aerobic conversion of toxic compounds to harmless substances.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification","termid":"GO:0098754"},{"relation_name":"part_of","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03288":null,"SJAG_04063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0008150","GO:0098754"],"is_obsolete":false,"name":"detoxification of nitrogen compound","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"detoxification of nitrogenous compound","type":"exact"},{"name":"nitric oxide (NO) detoxification","type":"narrow"}],"termid":"GO:0051410","terms_by_termid":{"GO:0070458":null}}


id: PBO:0045541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrouridine synthase 1 like","termid":"PBO:0045541"}


id: PBO:0113250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"One of four core subunits of the ESCRT-III complex; involved in the sorting of transmembrane proteins into the multivesicular body (MVB) pathway; recruited from the cytoplasm to endosomal membranes; subunit of the endosomal sorting complex required for transport III (ESCRT-III) that forms flat spirals on lipid monolayers as part of the complexes role in driving membrane abscission","termid":"PBO:0113250"}


id: GO:0102619
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: oryzalexin A + NAD(P) = oryzalexin C + H+ + NAD(P)H.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete oryzalexin C synthase (oryzalexin A dependent) activity (obsolete GO:0102619)","termid":"GO:0102619"}


id: GO:2000611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of thyroid hormone generation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"positive regulation of hormone metabolic process","termid":"GO:0032352"},{"relation_name":"is_a","term_name":"regulation of thyroid hormone generation","termid":"GO:2000609"},{"relation_name":"positively_regulates","term_name":"thyroid hormone generation","termid":"GO:0006590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of thyroid hormone generation","termid":"GO:2000611"}


id: GO:0071106
data:
  {"annotated_genes":["SJAG_04325"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102816],"is_not":false,"summary":null,"term":"GO:0071106"}]},"cv_name":"biological_process","definition":"The process in which adenosine 3',5'-bisphosphate is transported across a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide transport","termid":"GO:0015868"},{"relation_name":"is_a","term_name":"adenine nucleotide transport","termid":"GO:0051503"},{"relation_name":"is_a","term_name":"purine-containing compound transmembrane transport","termid":"GO:0072530"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transport","termid":"GO:1901679"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04325":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"adenosine 3',5'-bisphosphate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"adenosine 3',5'-bisphosphate membrane transport","type":"exact"},{"name":"adenosine 3',5'-diphosphate transport","type":"exact"},{"name":"adenosine 3'-phosphate-5'-phosphate transmembrane transport","type":"exact"}],"termid":"GO:0071106","terms_by_termid":{"GO:0071106":null}}


id: PBO:0055873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 3","termid":"PBO:0055873"}


id: PBO:0072025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S9 pseudogene 1","termid":"PBO:0072025"}


id: GO:0005685
data:
  {"annotated_genes":["SJAG_05009","SJAG_01654","SJAG_04163","SJAG_03983","SJAG_01301","SJAG_01015","SJAG_01440","SJAG_02279","SJAG_00147","SJAG_03469","SJAG_01870","SJAG_00058","SJAG_04214","SJAG_04911","SJAG_00474","SJAG_02843","SJAG_02304"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87585,90042,90963,91223,91653,93902,98642,98810,101987,103063,106201,106765,106784,106795,108517,109433,111409],"is_not":false,"summary":null,"term":"GO:0005685"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains small nuclear RNA U1, a heptameric ring of Sm proteins, as well as several proteins that are unique to the U1 snRNP, most of which remain associated with the U1 snRNA both while the U1 snRNP is free or assembled into a series of spliceosomal complexes.","definition_xrefs":["GOC:krc","GOC:mah","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00147":null,"SJAG_00474":null,"SJAG_01015":null,"SJAG_01301":null,"SJAG_01440":null,"SJAG_01654":null,"SJAG_01870":null,"SJAG_02279":null,"SJAG_02304":null,"SJAG_02843":null,"SJAG_03469":null,"SJAG_03983":null,"SJAG_04163":null,"SJAG_04214":null,"SJAG_04911":null,"SJAG_05009":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"U1 snRNP","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"snRNP U1","type":"exact"}],"termid":"GO:0005685","terms_by_termid":{"GO:0005685":null}}


id: GO:0047618
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(4)-benzoylagmatine + H2O = agmatine + benzoate.","definition_xrefs":["RHEA:15065","EC:3.5.1.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"acylagmatine amidase activity","secondary_identifiers":["MetaCyc:ACYLAGMATINE-AMIDASE-RXN","KEGG_REACTION:R01425"],"synonyms":[{"name":"acylagmatine amidohydrolase activity","type":"related"},{"name":"acylagmatine deacylase activity","type":"related"},{"name":"benzoylagmatine amidohydrolase activity","type":"related"}],"termid":"GO:0047618"}


id: PBO:0089842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PX domain sorting nexin Snx41","termid":"PBO:0089842"}


id: PBO:0029564
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_1,3-beta-D-glucan_synthase_activity","termid":"PBO:0029564"}


id: GO:0002207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The somatic process in which immunoglobulin genes are diversified through the mechanism of gene conversion following the induction of and contributing to an immune response.","definition_xrefs":["GOC:add","PMID:14991701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene conversion of immunoglobulin genes","termid":"GO:0002206"},{"relation_name":"is_a","term_name":"somatic diversification of immunoglobulins involved in immune response","termid":"GO:0002208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006259","GO:0010467"],"is_obsolete":false,"name":"gene conversion of immunoglobulin genes involved in immune response","synonyms":[{"name":"gene conversion of antibody genes during immune response","type":"related"},{"name":"gene conversion of immunoglobulin genes during immune response","type":"related"}],"termid":"GO:0002207"}


id: GO:0050877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A organ system process carried out by any of the organs or tissues of neurological system.","definition_xrefs":["GOC:mtg_cardio","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system process","termid":"GO:0003008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nervous system process","synonyms":[{"name":"neurological system process","type":"exact"},{"name":"neurophysiological process","type":"exact"},{"name":"pan-neural process","type":"related"}],"termid":"GO:0050877"}


id: PBO:0079906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase core protein 1","termid":"PBO:0079906"}


id: PBO:0002637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation release factor eRF1","termid":"PBO:0002637"}


id: PBO:0080584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 7","termid":"PBO:0080584"}


id: PBO:0076661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 23, pseudogene","termid":"PBO:0076661"}


id: PBO:0027013
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_regulation_of_molecular_function","termid":"PBO:0027013"}


id: GO:0020006
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Tubular network of extensions from the symbiont-containing vacuole membrane that protrude into the host cytoplasm.","definition_xrefs":["GOC:jl","PMID:3528173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"},{"relation_name":"part_of","term_name":"symbiont-containing vacuole membrane","termid":"GO:0020005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"symbiont-containing vacuolar membrane network","synonyms":[{"name":"parasitophorous vacuolar membrane network","type":"exact"},{"name":"symbiont-containing vacuole membrane network","type":"exact"},{"name":"tubulovesicular network","type":"narrow"}],"termid":"GO:0020006"}


id: PBO:0002402
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.145","termid":"PBO:0002402"}


id: GO:2000638
data:
  {"annotated_genes":["SJAG_00642","SJAG_01632","SJAG_03568","SJAG_01150","SJAG_02682","SJAG_01253","SJAG_00293"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87261,102011,107862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000639"},{"annotations":[109594,109595,109596,113165,89724,89723,89725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000640"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the SREBP signaling pathway.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"SREBP signaling pathway","termid":"GO:0032933"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00293":null,"SJAG_00642":null,"SJAG_01150":null,"SJAG_01253":null,"SJAG_01632":null,"SJAG_02682":null,"SJAG_03568":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of SREBP signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of SREBP-mediated signaling pathway","type":"exact"},{"name":"regulation of SREBP-mediated signalling pathway","type":"exact"}],"termid":"GO:2000638","terms_by_termid":{"GO:2000639":null,"GO:2000640":null}}


id: GO:1903039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of leukocyte cell-cell adhesion.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:TermGenie","PMID:21106532","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-cell adhesion","termid":"GO:0022409"},{"relation_name":"is_a","term_name":"regulation of leukocyte cell-cell adhesion","termid":"GO:1903037"},{"relation_name":"positively_regulates","term_name":"leukocyte cell-cell adhesion","termid":"GO:0007159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of leukocyte cell-cell adhesion","synonyms":[{"name":"activation of leukocyte adhesion","type":"narrow"},{"name":"activation of leukocyte cell adhesion","type":"narrow"},{"name":"activation of leukocyte cell-cell adhesion","type":"narrow"},{"name":"positive regulation of leukocyte adhesion","type":"exact"},{"name":"positive regulation of leukocyte cell adhesion","type":"exact"},{"name":"up regulation of leukocyte adhesion","type":"exact"},{"name":"up regulation of leukocyte cell adhesion","type":"exact"},{"name":"up regulation of leukocyte cell-cell adhesion","type":"exact"},{"name":"up-regulation of leukocyte adhesion","type":"exact"},{"name":"up-regulation of leukocyte cell adhesion","type":"exact"},{"name":"up-regulation of leukocyte cell-cell adhesion","type":"exact"},{"name":"upregulation of leukocyte adhesion","type":"exact"},{"name":"upregulation of leukocyte cell adhesion","type":"exact"},{"name":"upregulation of leukocyte cell-cell adhesion","type":"exact"}],"termid":"GO:1903039"}


id: FYPO:0003308
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is normal (i.e. indistinguishable from wild type) during interphase of the cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to mitotic spindle pole body","termid":"FYPO:0002967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to mitotic spindle pole body during interphase","synonyms":[{"name":"normal protein localisation to mitotic spindle pole body during interphase","type":"exact"},{"name":"normal protein localization to mitotic SPB during interphase","type":"exact"},{"name":"normal protein localization to mitotic spindle pole body during mitotic interphase","type":"exact"},{"name":"normal protein localization to spindle pole body during interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0003308"}


id: PBO:0040117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 4","termid":"PBO:0040117"}


id: FYPO:0007765
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype in which protein levels that normally vary over the course of the mitotic cell cycle do not vary, or change in a pattern different from normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah","PMID:9430640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression regulation phenotype during vegetative growth","termid":"FYPO:0001333"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein level oscillation during mitotic cell cycle","synonyms":[{"name":"abnormal periodic protein expression during mitotic cell cycle","type":"exact"},{"name":"abnormal protein level fluctuation during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0007765"}


id: PBO:0051743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INTS9 antisense RNA 1","termid":"PBO:0051743"}


id: PBO:0036234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein L-glutamate O-methyltransferase, implicated in DNA damage response (predicted)","termid":"PBO:0036234"}


id: PBO:0084992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-dependent medium chain alcohol dehydrogenase; has broad substrate specificity; member of the cinnamyl family of alcohol dehydrogenases; may be involved in fusel alcohol synthesis or in aldehyde tolerance","termid":"PBO:0084992"}


id: PBO:0082335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-binding protein of unknown function; crystal structure resembles that of E.coli pantothenate kinase and other small kinases; null mutant is sensitive to expression of the top1-T722A allele","termid":"PBO:0082335"}


id: FYPO:0007032
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the glycosylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal. Protein glycosylation is the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid.","definition_xrefs":["GO:0006486","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein glycosylation during vegetative growth","termid":"FYPO:0001910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0001985","FYPO:0001320","FYPO:0002274"],"is_obsolete":false,"name":"increased protein glycosylation during vegetative growth","synonyms":[{"name":"increased protein glycosylation during mitotic cell cycle","type":"related"},{"name":"protein hyperglycosylation during vegetative growth","type":"exact"}],"termid":"FYPO:0007032"}


id: GO:0022858
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of alanine from one side of a membrane to the other. Alanine is 2-aminopropanoic acid.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"alanine transmembrane transporter activity","termid":"GO:0022858"}


id: PBO:0003415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Usp103 (predicted)","termid":"PBO:0003415"}


id: GO:0048871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state at the level of the multicellular organism.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"is_a","term_name":"homeostatic process","termid":"GO:0042592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multicellular organismal-level homeostasis","termid":"GO:0048871"}


id: PBO:0087040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L19B; rpl19a and rpl19b single null mutations result in slow growth, while the double null mutation is lethal; homologous to mammalian ribosomal protein L19, no bacterial homolog; RPL19B has a paralog, RPL19A, that arose from the whole genome duplication","termid":"PBO:0087040"}


id: PATO:0000605
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000605 placement value (obsolete PATO:0000605)","synonyms":[{"name":"location","type":"related"},{"name":"position","type":"related"}],"termid":"PATO:0000605"}


id: PR:O14270
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fhl1 gene.","definition_xrefs":["UniProtKB:O14270","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fork head transcription factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1142.08","synonyms":[{"name":"Spom972h-fhl1","type":"exact"}],"termid":"PR:O14270"}


id: FYPO:0005886
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more heat shock elements (HSEs) occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0000294","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased transcription from HSE promoter","synonyms":[{"name":"expression of Hsf1 target genes increased","type":"related"},{"name":"increased transcription from HSE promoter during mitotic cell cycle","type":"related"},{"name":"increased transcription from HSE promoter during vegetative growth","type":"exact"}],"termid":"FYPO:0005886"}


id: PR:P87168
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trz2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease Z 2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.03c","synonyms":[{"name":"RNase Z 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-trz2","type":"exact"},{"name":"tRNA 3 endonuclease 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNase Z 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87168"}


id: PR:Q9USS0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pyrazinamidase/nicotinamidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03298","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.20c","secondary_identifiers":["UniProtKB:Q9USS0"],"synonyms":[{"name":"NAMase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pncA","type":"exact"},{"name":"nicotine deamidase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USS0"}


id: GO:0100020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates transport.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transport by transcription from RNA polymerase II promoter (obsolete GO:0100020)","termid":"GO:0100020"}


id: PBO:0035811
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_(1->3)-alpha-D-glucan_level_in_periplasmic_space","termid":"PBO:0035811"}


id: GO:0047419
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N-acetyl-D-galactosamine 6-phosphate = acetate + D-galactosamine 6-phosphate.","definition_xrefs":["RHEA:18149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0019213","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"N-acetylgalactosamine-6-phosphate deacetylase activity","secondary_identifiers":["MetaCyc:3.5.1.80-RXN"],"termid":"GO:0047419"}


id: GO:0021865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The mitotic division of a radial glial cell giving rise to two new radial glial cells in the forebrain.","definition_xrefs":["PMID:16226447","GOC:jid","GO_REF:0000021","GOC:dgh","GOC:cls","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete symmetric radial glial cell division in forebrain (obsolete GO:0021865)","termid":"GO:0021865"}


id: PBO:0088325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATOR2-SEACAT complex/GATOR1-SEACIT GTPase complex ubiquitin-protein ligase E3 subunit Sea3","termid":"PBO:0088325"}


id: GO:0044431
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the Golgi apparatus, a compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete Golgi apparatus part (obsolete GO:0044431)","synonyms":[{"name":"Golgi component","type":"exact"},{"name":"Golgi subcomponent","type":"exact"}],"termid":"GO:0044431"}


id: PBO:0001449
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aicardi-Goutieres syndrome","termid":"PBO:0001449"}


id: PBO:0002230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translationally controlled tumor protein homolog (predicted)","termid":"PBO:0002230"}


id: PBO:0034531
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_with_fragmented_nucleus_and_mitotic_cell_cycle_arrest_in_interphase_during_cellular_response_to_UV","termid":"PBO:0034531"}


id: GO:0030576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of Cajal bodies, nuclear bodies that appear ultrastructurally as a tangle of coiled, electron-dense threads roughly 0.5 micrometers in diameter and are enriched in ribonucleoproteins, and certain general RNA polymerase II transcription factors.","definition_xrefs":["PMID:11031238","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear body organization","termid":"GO:0030575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Cajal body organization","synonyms":[{"name":"Cajal body organisation","type":"exact"},{"name":"Cajal body organization and biogenesis","type":"related"}],"termid":"GO:0030576"}


id: GO:0097292
data:
  {"annotated_genes":["SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving XMP, xanthosine monophosphate.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate metabolic process","termid":"GO:0009167"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"XMP metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"XMP metabolism","type":"exact"}],"termid":"GO:0097292","terms_by_termid":{"GO:0032265":null}}


id: _global:causally_influenced_by
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_relation_between_entities","termid":"_global:causal_relation_between_entities"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_influenced_by","secondary_identifiers":["RO:0002559"],"termid":"_global:causally_influenced_by"}


id: GO:0043567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of insulin-like growth factor receptor signaling.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"insulin-like growth factor receptor signaling pathway","termid":"GO:0048009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of insulin-like growth factor receptor signaling pathway","synonyms":[{"name":"regulation of IGF receptor signaling pathway","type":"exact"},{"name":"regulation of IGF receptor signalling pathway","type":"exact"},{"name":"regulation of insulin-like growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0043567"}


id: PBO:0027951
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_pyridoxal_level","termid":"PBO:0027951"}


id: MOD:00153
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to 3'-(8alpha-FAD)-L-histidine.","definition_xrefs":["PubMed:8076","Unimod:50#H","PubMed:241294","RESID:AA0144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FAD modified residue","termid":"MOD:00895"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-(8alpha-FAD)-L-histidine","synonyms":[{"name":"(2S)-2-amino-3-(3-[8alpha-riboflavin 5'-(trihydrogen diphosphate) 5'->5'-ester with adenosine]imidazol-4-yl)propanoic acid","type":"exact"},{"name":"3'-(8alpha-FAD)-L-histidine","type":"exact"},{"name":"8alpha-(N(delta)-histidyl)FAD","type":"exact"},{"name":"8alpha-(N3'-histidyl)FAD","type":"exact"},{"name":"8alpha-N1-histidyl FAD","type":"related"},{"name":"FAD","type":"related"},{"name":"Flavin adenine dinucleotide","type":"related"},{"name":"MOD_RES Pros-8alpha-FAD histidine","type":"exact"},{"name":"N(pi)-(8alpha-FAD)-histidine","type":"exact"},{"name":"Np8aFADHis","type":"exact"},{"name":"pros-(8alpha-FAD)-histidine","type":"exact"}],"termid":"MOD:00153"}


id: PBO:0077259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane p24 trafficking protein 9","termid":"PBO:0077259"}


id: PBO:0034361
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-developmentally_induced_by","termid":"PBO:0034361"}


id: PBO:0002270
data:
  {"annotation_feature_type":"gene","cv_name":"pathway","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKA","termid":"PBO:0002270"}


id: GO:0090532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-ascorbic acid via the intermediate UDP-alpha-D-glucuronate.","definition_xrefs":["PMID:11153268","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-ascorbic acid biosynthetic process","termid":"GO:0019853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0006766","GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"L-ascorbic acid biosynthetic process via UDP-alpha-D-glucuronate","synonyms":[{"name":"L-ascorbic acid biosynthesis via UDP-alpha-D-glucuronate","type":"related"}],"termid":"GO:0090532"}


id: GO:1902943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of voltage-gated chloride channel activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:22006324","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of anion channel activity","termid":"GO:1901529"},{"relation_name":"is_a","term_name":"regulation of voltage-gated chloride channel activity","termid":"GO:1902941"},{"relation_name":"is_a","term_name":"positive regulation of inorganic anion transmembrane transport","termid":"GO:1903797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of voltage-gated chloride channel activity","synonyms":[{"name":"activation of voltage gated chloride channel activity","type":"narrow"},{"name":"activation of voltage-dependent chloride channel activity","type":"narrow"},{"name":"activation of voltage-gated chloride channel activity","type":"narrow"},{"name":"positive regulation of voltage gated chloride channel activity","type":"exact"},{"name":"positive regulation of voltage-dependent chloride channel activity","type":"exact"},{"name":"up regulation of voltage gated chloride channel activity","type":"exact"},{"name":"up regulation of voltage-dependent chloride channel activity","type":"exact"},{"name":"up regulation of voltage-gated chloride channel activity","type":"exact"},{"name":"up-regulation of voltage gated chloride channel activity","type":"exact"},{"name":"up-regulation of voltage-dependent chloride channel activity","type":"exact"},{"name":"up-regulation of voltage-gated chloride channel activity","type":"exact"},{"name":"upregulation of voltage gated chloride channel activity","type":"exact"},{"name":"upregulation of voltage-dependent chloride channel activity","type":"exact"},{"name":"upregulation of voltage-gated chloride channel activity","type":"exact"}],"termid":"GO:1902943"}


id: PBO:0018286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMP deaminase family/ methyltransferase bifunctional enzyme involved in riboflavin biosynthesis and tRNA pseudouridine biosynthesis Rib2 (predicted)","termid":"PBO:0018286"}


id: GO:0050692
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein's DNA binding domain (DBD).","definition_xrefs":["PMID:9682036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"DNA binding domain binding","synonyms":[{"name":"DBD binding","type":"exact"}],"termid":"GO:0050692"}


id: PBO:0067322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 413, pseudogene","termid":"PBO:0067322"}


id: GO:0019768
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with high affinity with an immunoglobulin of the IgE isotype via the Fc region, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IgE receptor activity","termid":"GO:0019767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"high-affinity IgE receptor activity","synonyms":[{"name":"high affinity Fc receptor activity","type":"related"},{"name":"high affinity IgE receptor activity","type":"exact"}],"termid":"GO:0019768"}


id: PBO:0029277
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_ubiquitin_ligase_activity_during_mitotic_metaphase","termid":"PBO:0029277"}


id: FYPO:0003392
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of ubiquinone binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ubiquinone binding","termid":"FYPO:0003391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased ubiquinone binding","synonyms":[{"name":"decreased coenzyme Q binding","type":"exact"},{"name":"reduced ubiquinone binding","type":"exact"}],"termid":"FYPO:0003392"}


id: PR:Q9P6S0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mucin-22 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell agglutination protein 1742.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1742.01","secondary_identifiers":["UniProtKB:Q9P6S0"],"synonyms":[{"name":"Spom972h-MUC22","type":"exact"}],"termid":"PR:Q9P6S0"}


id: PBO:0040159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASIC4 antisense RNA 1","termid":"PBO:0040159"}


id: PBO:0032696
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_mitotic_spindle_elongation_during_anaphase_B","termid":"PBO:0032696"}


id: GO:1904839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of male germ-line stem cell asymmetric division.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:19339709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"negative regulation of asymmetric cell division","termid":"GO:0045769"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of male germ-line stem cell asymmetric division","termid":"GO:1904838"},{"relation_name":"negatively_regulates","term_name":"male germ-line stem cell asymmetric division","termid":"GO:0048133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of male germ-line stem cell asymmetric division","synonyms":[{"name":"down regulation of male germ-line stem cell asymmetric division","type":"exact"},{"name":"down regulation of male germ-line stem cell renewal","type":"exact"},{"name":"down-regulation of male germ-line stem cell asymmetric division","type":"exact"},{"name":"down-regulation of male germ-line stem cell renewal","type":"exact"},{"name":"downregulation of male germ-line stem cell asymmetric division","type":"exact"},{"name":"downregulation of male germ-line stem cell renewal","type":"exact"},{"name":"inhibition of male germ-line stem cell asymmetric division","type":"narrow"},{"name":"inhibition of male germ-line stem cell renewal","type":"narrow"},{"name":"negative regulation of male germ-line stem cell renewal","type":"exact"}],"termid":"GO:1904839"}


id: PBO:0039061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiogenic factor with G-patch and FHA domains 1 pseudogene 10","termid":"PBO:0039061"}


id: PBO:0092036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial RNase P RNA","termid":"PBO:0092036"}


id: PR:000050598
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ADP-ribosylation factor 6 (Schizosaccharomyces pombe) that is non-covalently bound to GTP.","definition_xrefs":["PRO:DAN","PMID:34958661","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arf6/GTP+","pombase_gene_id":"SPCC550.12","synonyms":[{"name":"Arf6/GTP+","type":"exact"},{"name":"PomBase_original_PRO_term_name: ADP-ribosylation factor 6, GTP-bound form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-ARF6/GTP+","type":"exact"}],"termid":"PR:000050598"}


id: SO:0000235
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA site where a transcription factor binds.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"},{"relation_name":"is_a","term_name":"nucleotide_to_protein_binding_site","termid":"SO:0001654"},{"relation_name":"part_of","term_name":"cis_regulatory_module","termid":"SO:0000727"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TF_binding_site","synonyms":[{"name":"TF binding site","type":"exact"},{"name":"transcription factor binding site","type":"exact"}],"termid":"SO:0000235"}


id: PBO:0070928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 36","termid":"PBO:0070928"}


id: PBO:0049815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 7","termid":"PBO:0049815"}


id: PBO:0064907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 4 catalytic subunit","termid":"PBO:0064907"}


id: GO:0060376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of mast cell differentiation, the process in which a relatively unspecialized myeloid precursor cell acquires the specialized features of a mast cell. A mast cell is a cell that is found in almost all tissues containing numerous basophilic granules and capable of releasing large amounts of histamine and heparin upon activation.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myeloid leukocyte differentiation","termid":"GO:0002763"},{"relation_name":"is_a","term_name":"regulation of mast cell differentiation","termid":"GO:0060375"},{"relation_name":"positively_regulates","term_name":"mast cell differentiation","termid":"GO:0060374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mast cell differentiation","termid":"GO:0060376"}


id: GO:2000275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of oxidative phosphorylation uncoupler activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proton transport","termid":"GO:0010155"},{"relation_name":"is_a","term_name":"regulation of transmembrane transporter activity","termid":"GO:0022898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of oxidative phosphorylation uncoupler activity","synonyms":[{"name":"regulation of mitochondrial uncoupling protein activity","type":"related"},{"name":"regulation of uncoupling protein activity","type":"related"}],"termid":"GO:2000275"}


id: GO:0051234
data:
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id: PR:Q9P6I5
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id: GO:1903446
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id: PBO:0003789
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id: PR:Q9HDW3
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id: FYPO:0001715
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id: PBO:0055867
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id: PBO:0050390
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id: GO:0019150
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id: PBO:0055715
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id: PBO:0047590
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id: PR:Q9P7T9
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id: PBO:0048081
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id: PBO:0061131
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id: SO:0000397
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id: PBO:0080037
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id: PR:Q9UUE7
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id: GO:0023052
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id: PBO:0069354
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id: GO:2000396
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id: PBO:0074718
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id: PBO:0085031
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id: PBO:0063918
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id: PBO:0025548
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id: PBO:0005780
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id: PBO:0050699
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id: PBO:0049236
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate metabotropic receptor 7","termid":"PBO:0049236"}


id: PBO:0030207
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id: GO:0070988
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id: GO:0031654
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id: PR:Q9Y7X6
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ish1 gene.","definition_xrefs":["UniProtKB:Q9Y7X6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress response protein ish1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.12c","synonyms":[{"name":"Spom972h-ish1","type":"exact"}],"termid":"PR:Q9Y7X6"}


id: GO:0180043
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id: PBO:0028710
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id: PBO:0078365
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id: MOD:00430
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces three hydrogen atoms with three methyl groups.","definition_xrefs":["Unimod:37","PubMed:12590383","PubMed:3145979","PubMed:7093227","PubMed:6778808","PubMed:4304194","PubMed:8453381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"trimethylated residue","synonyms":[{"name":"Me3Res","type":"exact"},{"name":"Trimethyl","type":"related"},{"name":"tri-Methylation","type":"related"}],"termid":"MOD:00430"}


id: GO:0033484
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of nitric oxide within a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular nitric oxide homeostasis","synonyms":[{"name":"NO homeostasis","type":"broad"},{"name":"cellular nitric oxide homeostasis","type":"exact"},{"name":"nitric oxide homeostasis","type":"broad"}],"termid":"GO:0033484"}


id: PATO:0000299
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id: GO:0017122
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id: FYPO:0002679
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115631,115627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001838"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphorylation","termid":"FYPO:0002677"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_04551":null},"genotype_count":2,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein phosphorylation","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_00610","SJAG_04551"],"single_locus_genotype_uniquenames":["pck2delta","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"reduced protein phosphorylation","type":"exact"}],"termid":"FYPO:0002679","terms_by_termid":{"FYPO:0001838":null}}


id: FYPO:0007350
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is decreased (i.e. occurs to a lower extent) at a cis-acting homologous chromosome pairing region on chromosome 2.","definition_xrefs":["PMID:31811152","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased homologous chromosome pairing at cis-acting homologous chromosome pairing region","termid":"FYPO:0003054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"decreased homologous chromosome pairing at cis-acting homologous chromosome pairing region on chromosome 2","synonyms":[{"name":"decreased homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region on chromosome 2","type":"exact"},{"name":"decreased homologous chromosome pairing at sme2 locus","type":"narrow"},{"name":"decreased synapsis at cis-acting homologous chromosome pairing region on chromosome 2","type":"exact"},{"name":"reduced homologous chromosome pairing at cis-acting homologous chromosome pairing region on chromosome 2","type":"exact"}],"termid":"FYPO:0007350"}


id: GO:0016711
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a flavonoid + NADPH + H+ + O2 = 3'-hydroxyflavonoid + NADP+ + H2O.","definition_xrefs":["EC:1.14.14.82"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"flavonoid 3'-monooxygenase activity","secondary_identifiers":["MetaCyc:FLAVONOID-3-MONOOXYGENASE-RXN","RHEA:16337"],"synonyms":[{"name":"NADPH:flavonoid-3'-hydroxylase activity","type":"related"},{"name":"flavonoid 3'-hydroxylase activity","type":"related"},{"name":"flavonoid 3-hydroxylase","type":"related"},{"name":"flavonoid 3-monooxygenase","type":"related"},{"name":"flavonoid,NADPH:oxygen oxidoreductase (3'-hydroxylating)","type":"related"}],"termid":"GO:0016711"}


id: GO:0007425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process in which a cell becomes capable of differentiating autonomously into an epithelial cell within an open tracheal system regardless of its environment; upon determination, the cell fate cannot be reversed. Tracheal cells are set aside as 10 clusters of approximately 80 cells on each side of the embryo (termed tracheal placodes). An example of this is found in Drosophila melanogaster.","definition_xrefs":["PMID:11063940","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"open tracheal system development","termid":"GO:0007424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell fate determination, open tracheal system","secondary_identifiers":["GO:0046846"],"synonyms":[{"name":"tracheal cell fate determination","type":"broad"},{"name":"tracheal epithelial cell fate determination","type":"exact"},{"name":"tracheal placode cell fate determination","type":"related"}],"termid":"GO:0007425"}


id: GO:0016973
data:
  {"annotated_genes":["SJAG_04536","SJAG_01374","SJAG_03986","SJAG_03847","SJAG_02209","SJAG_00298","SJAG_04721","SJAG_04017","SJAG_01584","SJAG_04379","SJAG_00641","SJAG_02534","SJAG_04480","SJAG_01715","SJAG_04310","SJAG_04115","SJAG_04347","SJAG_04202","SJAG_02704","SJAG_01185","SJAG_00178","SJAG_00992","SJAG_04148","SJAG_00093","SJAG_01083","SJAG_01449","SJAG_03002","SJAG_01529","SJAG_05328","SJAG_04656"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68957,86976,88215,92596,93015,97475,97951,98052,98751,98848,100059,101863,102280,103765,104826,105994,106567,107263,107900,109403,110615,111150,111678,111969,112226,112487,112594,112741,114197,115105],"is_not":false,"summary":null,"term":"GO:0016973"}]},"cv_name":"biological_process","definition":"The directed movement of poly(A)+ mRNA out of the nucleus into the cytoplasm.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA export from nucleus","termid":"GO:0006406"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00178":null,"SJAG_00298":null,"SJAG_00641":null,"SJAG_00992":null,"SJAG_01083":null,"SJAG_01185":null,"SJAG_01374":null,"SJAG_01449":null,"SJAG_01529":null,"SJAG_01584":null,"SJAG_01715":null,"SJAG_02209":null,"SJAG_02534":null,"SJAG_02704":null,"SJAG_03002":null,"SJAG_03847":null,"SJAG_03986":null,"SJAG_04017":null,"SJAG_04115":null,"SJAG_04148":null,"SJAG_04202":null,"SJAG_04310":null,"SJAG_04347":null,"SJAG_04379":null,"SJAG_04480":null,"SJAG_04536":null,"SJAG_04656":null,"SJAG_04721":null,"SJAG_05328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0010467","GO:0006810","GO:0006913"],"is_obsolete":false,"name":"poly(A)+ mRNA export from nucleus","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"poly(A) mRNA export from nucleus","type":"exact"},{"name":"poly(A)+ mRNA export from cell nucleus","type":"exact"},{"name":"poly(A)+ mRNA export out of nucleus","type":"exact"},{"name":"poly(A)+ mRNA transport from nucleus to cytoplasm","type":"exact"},{"name":"poly(A)+ mRNA-nucleus export","type":"exact"},{"name":"polyadenylated mRNA export from nucleus","type":"related"}],"termid":"GO:0016973","terms_by_termid":{"GO:0016973":null}}


id: PBO:0075583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine peptidase inhibitor Kazal type 7","termid":"PBO:0075583"}


id: PBO:0053297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM zinc finger domain containing 3","termid":"PBO:0053297"}


id: PBO:0048338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 49","termid":"PBO:0048338"}


id: PBO:0001166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spore wall assembly ADAM family peptidase Mde10","termid":"PBO:0001166"}


id: FYPO:0000680
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A developmental process phenotype in which ascus development is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process phenotype","termid":"FYPO:0000679"},{"relation_name":"is_a","term_name":"abnormal biological process","termid":"FYPO:0005447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal ascus development","termid":"FYPO:0000680"}


id: PBO:0034041
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-partner_in","termid":"PBO:0034041"}


id: PBO:0039107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AHI1 divergent transcript","termid":"PBO:0039107"}


id: PBO:0001027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Usp (universal stress protein) family protein, implicated in meiotic chromosome segregation","termid":"PBO:0001027"}


id: PBO:0074800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 13E","termid":"PBO:0074800"}


id: GO:0097058
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that is composed of cardiotrophin-like cytokine factor 1 (product of the CLCF1 gene) and cytokine receptor-like factor 1 (product of the CRLF gene) and is secreted into the extracellular space. The CRLF-CLCF1 complex is a ligand for the ciliary neurotrophic factor (CNTF) receptor complex.","definition_xrefs":["GOC:BHF","PMID:10966616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"CRLF-CLCF1 complex","synonyms":[{"name":"CLF-CLC complex","type":"narrow"}],"termid":"GO:0097058"}


id: SO:0001376
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_methyldihydrouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methyldihydrouridine","secondary_identifiers":["RNAMOD:093"],"synonyms":[{"name":"5-methyldihydrouridine","type":"exact"},{"name":"five methyldihydrouridine","type":"exact"},{"name":"m5D","type":"exact"}],"termid":"SO:0001376"}


id: PBO:0087641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the GET complex; involved in insertion of proteins into the ER membrane; required for the retrieval of HDEL proteins from the Golgi to the ER in an ERD2 dependent fashion and for normal mitochondrial morphology and inheritance","termid":"PBO:0087641"}


id: GO:1904029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cyclin-dependent protein kinase activity.","definition_xrefs":["GOC:TermGenie","GOC:als","GO_REF:0000059","PMID:22995177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein kinase activity","termid":"GO:0045859"},{"relation_name":"is_a","term_name":"regulation of cell cycle","termid":"GO:0051726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of cyclin-dependent protein kinase activity","termid":"GO:1904029"}


id: GO:0141126
data:
  {"annotated_genes":["SJAG_00944"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003860"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a short-chain fatty acyl-CoA + H2O = a short fatty acid + CoA + H+. A short-chain fatty acid has an aliphatic tail of less than 6 carbons.","definition_xrefs":["RHEA:68180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acyl-CoA hydrolase activity","termid":"GO:0047617"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00944":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"short-chain fatty acyl-CoA hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.2.18","MetaCyc:3.1.2.18-RXN"],"termid":"GO:0141126","terms_by_termid":{"GO:0003860":null}}


id: PBO:0088347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartate semialdehyde dehydrogenase Hom2","termid":"PBO:0088347"}


id: PBO:0030675
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_septation_index","termid":"PBO:0030675"}


id: GO:1990866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sustained stimulus indicating lowered oxygen tension.","definition_xrefs":["PMID:24055447"],"gene_count":0,"genotype_count":0,"name":"obsolete response to sustained hypoxia (obsolete GO:1990866)","termid":"GO:1990866"}


id: FYPO:0000020
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is shaped in the form of a pear. One end is rounded, while the other resembles an end of a normal rod-shaped cell. The normally shaped end has the same diameter as a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell shape","termid":"FYPO:0001126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"pear-shaped cell","synonyms":[{"name":"cell morphology, pear shaped","type":"exact"},{"name":"ice cream cone-shaped cell","type":"exact"}],"termid":"FYPO:0000020"}


id: GO:0008422
data:
  {"annotated_genes":["SJAG_02192","SJAG_03646","SJAG_00667","SJAG_02649","SJAG_01017","SJAG_03295","SJAG_01888","SJAG_01171","SJAG_05001","SJAG_02478"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83489,104527,111790],"is_not":false,"summary":null,"term":"GO:0008422"},{"annotations":[91148,90066,96232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042973"},{"annotations":[98038,104203,98039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046557"},{"annotations":[98041,91149,98040,104204,84319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004338"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal, non-reducing beta-D-glucose residues with release of beta-D-glucose.","definition_xrefs":["EC:3.2.1.21","PMID:12594539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosidase activity","termid":"GO:0015926"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_01017":null,"SJAG_01171":null,"SJAG_01888":null,"SJAG_02192":null,"SJAG_02478":null,"SJAG_02649":null,"SJAG_03295":null,"SJAG_03646":null,"SJAG_05001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"beta-glucosidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0016983","MetaCyc:3.2.1.21-RXN"],"synonyms":[{"name":"amygdalase activity","type":"narrow"},{"name":"amygdalinase","type":"narrow"},{"name":"arbutinase activity","type":"narrow"},{"name":"aryl-beta-glucosidase activity","type":"related"},{"name":"beta-1,6-glucosidase activity","type":"related"},{"name":"beta-D-glucosidase activity","type":"exact"},{"name":"beta-D-glucoside glucohydrolase activity","type":"related"},{"name":"beta-glucoside glucohydrolase activity","type":"exact"},{"name":"cellobiase activity","type":"narrow"},{"name":"cytokine beta-glucosidase activity","type":"narrow"},{"name":"elaterase activity","type":"narrow"},{"name":"emulsin","type":"related"},{"name":"gentiobiase activity","type":"narrow"},{"name":"gentobiase activity","type":"narrow"},{"name":"limarase activity","type":"narrow"},{"name":"p-nitrophenyl beta-glucosidase activity","type":"narrow"},{"name":"primeverosidase activity","type":"narrow"},{"name":"quercetin 3'-O-beta-D-glucopyranoside hydrolase activity","type":"narrow"},{"name":"quercetin 4'-O-beta-D-glucopyranoside hydrolase activity","type":"narrow"},{"name":"salicilinase activity","type":"narrow"}],"termid":"GO:0008422","terms_by_termid":{"GO:0004338":null,"GO:0008422":null,"GO:0042973":null,"GO:0046557":null}}


id: PR:O94444
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S proteasome non-ATPase regulatory subunit 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01888","PANTHER:PTHR10223:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory subunit rpn10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC637.10c","secondary_identifiers":["UniProtKB:O94444"],"synonyms":[{"name":"Spom972h-PSMD4","type":"exact"}],"termid":"PR:O94444"}


id: GO:0051346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the rate of hydrolase activity, the catalysis of the hydrolysis of various bonds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catalytic activity","termid":"GO:0043086"},{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hydrolase activity","synonyms":[{"name":"down regulation of hydrolase activity","type":"exact"},{"name":"down-regulation of hydrolase activity","type":"exact"},{"name":"downregulation of hydrolase activity","type":"exact"},{"name":"hydrolase inhibitor","type":"exact"},{"name":"inhibition of hydrolase activity","type":"narrow"}],"termid":"GO:0051346"}


id: PBO:0051229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-26-2 (pseudogene)","termid":"PBO:0051229"}


id: GO:0005142
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-11 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"interleukin-11 receptor binding","synonyms":[{"name":"IL-11","type":"narrow"},{"name":"interleukin-11 receptor ligand","type":"narrow"}],"termid":"GO:0005142"}


id: GO:0060890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a limb epidermal spinous cell.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keratinocyte differentiation","termid":"GO:0030216"},{"relation_name":"part_of","term_name":"limb epidermis development","termid":"GO:0060887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limb spinous cell differentiation","termid":"GO:0060890"}


id: PBO:0045799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelin 3","termid":"PBO:0045799"}


id: PBO:0113279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane transporter of the major facilitator superfamily; involved in the excretion of excess amino acids; member of the 12-spanner drug:H(+) antiporter DHA1 family; confers resistance to short-chain monocarboxylic acids and quinidine; relocalizes from plasma membrane to cytoplasm upon DNA replication stress; AQR1 has a paralog, QDR1, that arose from the whole genome duplication","termid":"PBO:0113279"}


id: FYPO:0002849
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is curved when the cell population has been in stationary phase and is then placed in conditions that allow recovery. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah","PomBase:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved vegetative cell","termid":"FYPO:0000016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"curved cell during recovery from stationary phase","synonyms":[{"name":"comma-shaped cell during recovery from stationary phase","type":"exact"},{"name":"curved cell during recovery from stationary phase during mitotic cell cycle","type":"related"},{"name":"curved cell during vegetative growth following stationary phase","type":"exact"}],"termid":"FYPO:0002849"}


id: GO:0032334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of an inhibin, either of two glycoproteins (designated A and B), secreted by the gonads and present in seminal plasma and follicular fluid, that inhibit pituitary production of follicle-stimulating hormone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine hormone secretion","termid":"GO:0060986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"inhibin secretion","termid":"GO:0032334"}


id: FYPO:0001661
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of cyclic AMP measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"altered cellular cAMP level","termid":"FYPO:0001659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular cAMP level","synonyms":[{"name":"increased cAMP accumulation","type":"related"},{"name":"increased cellular cAMP level during mitotic cell cycle","type":"related"},{"name":"increased cellular cAMP level during vegetative growth","type":"exact"},{"name":"increased cellular cyclic AMP level","type":"exact"}],"termid":"FYPO:0001661"}


id: FYPO:0006211
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates but dies before forming a germ tube or dividing. Such spores exit dormancy and undergo isotropic swelling but the spore wall does not rupture and no germ tube emerges.","definition_xrefs":["PMID:28572514","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, before germ tube formation","synonyms":[{"name":"inviable following spore germination, before germ tube formation","type":"exact"},{"name":"inviable germinated spore, without germ tube formation","type":"exact"},{"name":"lethal after spore germination, before germ tube formation","type":"exact"}],"termid":"FYPO:0006211"}


id: MOD:01006
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes two hydrogen atoms of an L-tyrosine residue with two bromine atoms.","definition_xrefs":["Unimod:534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brominated tyrosine","termid":"MOD:00988"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dibrominated tyrosine","synonyms":[{"name":"Br2Tyr","type":"exact"},{"name":"Dibromo","type":"related"}],"termid":"MOD:01006"}


id: GO:0000802
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structural unit of the synaptonemal complex that spans the regions between the lateral elements and connects them.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"synaptonemal complex","termid":"GO:0000795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"transverse filament","termid":"GO:0000802"}


id: PBO:0090713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TREX2 complex subunit Sac3","termid":"PBO:0090713"}


id: SO:0000850
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A component of the five-prime long terminal repeat.","definition_xrefs":["PMID:8649407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LTR_component","termid":"SO:0000848"},{"relation_name":"part_of","term_name":"five_prime_LTR","termid":"SO:0000425"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_LTR_component","synonyms":[{"name":"5' long term repeat component","type":"exact"},{"name":"five prime LTR component","type":"exact"}],"termid":"SO:0000850"}


id: GO:0090234
data:
  {"annotated_genes":["SJAG_04638","SJAG_00718","SJAG_03048","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905560"},{"annotations":[85682,98472,112854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905561"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of kinetochore assembly, the aggregation, arrangement and bonding together of a set of components to form the kinetochore, a multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of centromere complex assembly","termid":"GO:0090230"},{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"kinetochore assembly","termid":"GO:0051382"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00718":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"regulation of kinetochore assembly","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1901719"],"synonyms":[{"name":"regulation of NMS complex assembly","type":"narrow"},{"name":"regulation of chromosome-kinetochore attachment","type":"narrow"}],"termid":"GO:0090234","terms_by_termid":{"GO:1905560":null,"GO:1905561":null}}


id: GO:0044018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H3 L-lysine (position 36) = CoA + histone H3 N6-acetyl-L-lysine (position 36).","definition_xrefs":["PMID:18552846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 acetyltransferase activity","termid":"GO:0010484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0034212"}],"interesting_parent_ids":["GO:0034212","GO:0016746","GO:0003674","GO:0003824","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"histone H3K36 acetyltransferase activity","secondary_identifiers":["EC:2.3.1.48"],"synonyms":[{"name":"histone H3-K36 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H3-K36 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H3-K36 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H3-K36 specific)","type":"exact"}],"termid":"GO:0044018"}


id: PATO:0000241
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000241 corneal reflex (obsolete PATO:0000241)","termid":"PATO:0000241"}


id: PATO:0001159
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concentration quality inhering in a bearer by virtue of the bearer's exhibiting concentration.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concentration of","termid":"PATO:0000033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"concentrated","termid":"PATO:0001159"}


id: GO:0097317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth of colonies in filamentous chains of cells as a result of a biotic stimulus. An example of this is Candida albicans forming invasive filaments in agar medium in response to a serum stimulus.","definition_xrefs":["GOC:di","PMID:18679170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filamentous growth of a population of unicellular organisms in response to biotic stimulus","termid":"GO:0036180"},{"relation_name":"is_a","term_name":"invasive filamentous growth","termid":"GO:0036267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"invasive growth in response to biotic stimulus","termid":"GO:0097317"}


id: PATO:0000970
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's disposition to being permeated or pervaded by a liquid (as by osmosis or diffusion).","definition_xrefs":["Biology-online:Biology-online"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"permeability","termid":"PATO:0000970"}


id: PBO:0079071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Trp (anticodon CCA) 5-1","termid":"PBO:0079071"}


id: GO:0015500
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (threonine or serine)(out) + Na+(out) = (threonine or serine)(in) + Na+(in).","definition_xrefs":["TC:2.A.23.4.1"],"gene_count":0,"genotype_count":0,"name":"obsolete threonine/serine:sodium symporter activity (obsolete GO:0015500)","synonyms":[{"name":"threonine/serine:sodium symporter activity","type":"exact"}],"termid":"GO:0015500"}


id: GO:0050196
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [phosphorylase a] + 4 H2O = 2 [phosphorylase b] + 4 phosphate.","definition_xrefs":["EC:3.1.3.17","MetaCyc:PHOSPHORYLASE-PHOSPHATASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein phosphatase activity","termid":"GO:0004721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0140096","GO:0003824","GO:0016788","GO:0004721","GO:0003674"],"is_obsolete":false,"name":"[phosphorylase] phosphatase activity","synonyms":[{"name":"PR-enzyme","type":"related"},{"name":"glycogen phosphorylase phosphatase activity","type":"related"},{"name":"phosphorylase a phosphatase activity","type":"related"},{"name":"phosphorylase a phosphohydrolase activity","type":"related"},{"name":"phosphorylase phosphatase activity","type":"exact"},{"name":"protein phosphatase C","type":"related"},{"name":"type 1 protein phosphatase activity","type":"related"}],"termid":"GO:0050196"}


id: FYPO:0003684
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount of any macromolecular complex present in a cell differs from wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of macromolecular complex","termid":"FYPO:0007316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"altered level of macromolecular complex during vegetative growth","synonyms":[{"name":"abnormal level of macromolecular complex during vegetative growth","type":"exact"},{"name":"altered level of macromolecular complex during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003684"}


id: GO:0106395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a palmitic acid catabolic process.","definition_xrefs":["PMID:14677856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular catabolic process","termid":"GO:0031331"},{"relation_name":"is_a","term_name":"positive regulation of fatty acid metabolic process","termid":"GO:0045923"},{"relation_name":"is_a","term_name":"positive regulation of lipid catabolic process","termid":"GO:0050996"},{"relation_name":"is_a","term_name":"regulation of palmitic acid catabolic process","termid":"GO:0106393"},{"relation_name":"positively_regulates","term_name":"palmitic acid catabolic process","termid":"GO:1900534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of palmitic acid catabolic process","termid":"GO:0106395"}


id: SO:0002333
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A stop codon with the DNA sequence TAG.","direct_ancestors":[{"relation_name":"is_a","term_name":"stop_codon","termid":"SO:0000319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amber_stop_codon","synonyms":[{"name":"Amber stop codon","type":"exact"}],"termid":"SO:0002333"}


id: FYPO:0006787
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of poly(A)-specific ribonuclease activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal 3'-5'-exoribonuclease activity","termid":"FYPO:0002063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"abnormal poly(A)-specific ribonuclease activity","termid":"FYPO:0006787"}


id: FYPO:0001444
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"increased cellular trehalose level","termid":"FYPO:0002685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular trehalose level during vegetative growth","synonyms":[{"name":"increased cellular trehalose level during mitotic cell cycle","type":"related"},{"name":"increased trehalose accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0001444"}


id: GO:0002634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of germinal center formation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002822"},{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"germinal center formation","termid":"GO:0002467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of germinal center formation","termid":"GO:0002634"}


id: PBO:0058600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6732","termid":"PBO:0058600"}


id: FYPO:0001015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-4-phosphate measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered cellular phosphoinositide level","termid":"FYPO:0001290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"altered cellular phosphatidylinositol-4-phosphate level","synonyms":[{"name":"abnormal cellular phosphatidylinositol-4-phosphate level","type":"exact"},{"name":"altered PI-4-P accumulation","type":"related"},{"name":"altered cellular PI(4)P level","type":"exact"},{"name":"altered cellular PI-4-P level","type":"exact"},{"name":"altered cellular phosphatidylinositol-4-phosphate level during mitotic cell cycle","type":"related"},{"name":"altered cellular phosphatidylinositol-4-phosphate level during vegetative growth","type":"exact"}],"termid":"FYPO:0001015"}


id: PATO:0002306
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A triangular quality inhering in a bearer by virtue of the bearer's having all sides of the same length.","definition_xrefs":["PATOC:JB"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triangular","termid":"PATO:0001875"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"equilateral triangular","termid":"PATO:0002306"}


id: PR:Q09915
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription elongation factor SPT6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10145:SF1","OMA:SCHPO01747","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor spt6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F7.01c","secondary_identifiers":["UniProtKB:Q09915"],"synonyms":[{"name":"Spom972h-SUPT6H","type":"exact"},{"name":"chromatin elongation factor spt6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09915"}


id: GO:0160140
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(1911/1915/1917) in 23S rRNA = pseudouridine(1911/1915/1917) in 23S rRNA.","definition_xrefs":["EC:5.4.99.23","RHEA:42524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA pseudouridine synthase activity","termid":"GO:0120159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674","GO:0140098"],"is_obsolete":false,"name":"23S rRNA pseudouridine(1911/1915/1917) synthase activity","termid":"GO:0160140"}


id: GO:1905359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a meiotic spindle.","definition_xrefs":["PMID:26696398","GO_REF:0000087","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to microtubule cytoskeleton","termid":"GO:0072698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to meiotic spindle","synonyms":[{"name":"protein localisation to meiotic spindle","type":"exact"}],"termid":"GO:1905359"}


id: PBO:0040699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 related protein A1","termid":"PBO:0040699"}


id: PBO:0012264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal of transmembrane channel, truncated","termid":"PBO:0012264"}


id: GO:0102967
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (6E)-8-hydroxygeraniol + NADP = (6E)-8-hydroxygeranial + NADPH + H+.","definition_xrefs":["GOC:pz","RHEA:32607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"10-hydroxygeraniol oxidoreductase activity","secondary_identifiers":["MetaCyc:RXN-9367"],"termid":"GO:0102967"}


id: PBO:0059527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded 16S rRNA","termid":"PBO:0059527"}


id: PBO:0042317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD36 molecule","termid":"PBO:0042317"}


id: PR:O94431
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- egt2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hercynylcysteine sulfoxide lyase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC660.12c","synonyms":[{"name":"PLP-binding cysteine desulfurase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PLP-dependent C-S lyase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-egt2","type":"exact"},{"name":"ergothioneine biosynthesis protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94431"}


id: PBO:0018039
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae INP51 INP52 INP53 triple mutant","termid":"PBO:0018039"}


id: PBO:0085727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the nonsense-mediated mRNA decay (NMD) pathway; interacts with Nam7p and Upf3p; involved in telomere maintenance","termid":"PBO:0085727"}


id: GO:0061964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the dormancy process that results in entry into reproductive diapause. Reproductive diapause is a form of diapause where the organism itself will remain fully active, including feeding and other routine activities, but the reproductive organs experience a tissue-specific reduction in metabolism, with characteristic triggering and releasing stimuli.","definition_xrefs":["GOC:ha","PMID:27689881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of entry into reproductive diapause","termid":"GO:0061963"},{"relation_name":"negatively_regulates","term_name":"entry into reproductive diapause","termid":"GO:0055116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of entry into reproductive diapause","termid":"GO:0061964"}


id: GO:1900911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of olefin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of olefin metabolic process","termid":"GO:1900908"},{"relation_name":"regulates","term_name":"olefin biosynthetic process","termid":"GO:1900674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of olefin biosynthetic process","synonyms":[{"name":"regulation of olefin anabolism","type":"exact"},{"name":"regulation of olefin biosynthesis","type":"exact"},{"name":"regulation of olefin formation","type":"exact"},{"name":"regulation of olefin synthesis","type":"exact"}],"termid":"GO:1900911"}


id: PBO:0083196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene HIR3; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching","termid":"PBO:0083196"}


id: PBO:0083546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps uncharacterized gene YCR087C-A; YCR087W is not an essential gene","termid":"PBO:0083546"}


id: GO:1900603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tensidol A.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"tensidol A metabolic process","synonyms":[{"name":"tensidol A metabolism","type":"exact"}],"termid":"GO:1900603"}


id: GO:0080157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving plant-type cell wall organization or biogenesis. Plant-type cell wall organization or biogenesis is a process that results in the biosynthesis of constituent macromolecules, assembly, arrangement of constituent parts, or disassembly of a cellulose- and pectin-containing cell wall.","definition_xrefs":["PMID:20530756"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell wall organization or biogenesis","termid":"GO:1903338"},{"relation_name":"regulates","term_name":"plant-type cell wall organization or biogenesis","termid":"GO:0071669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"regulation of plant-type cell wall organization or biogenesis","synonyms":[{"name":"regulation of plant-type cell wall organisation or biogenesis","type":"exact"}],"termid":"GO:0080157"}


id: PBO:0059409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S35","termid":"PBO:0059409"}


id: GO:0021825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process where neuronal precursors migrate tangentially in the cerebral cortex, primarily guided through physical cell-cell interactions.","definition_xrefs":["GOC:jid","GOC:cls","GO_REF:0000021","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substrate-dependent cell migration","termid":"GO:0006929"},{"relation_name":"is_a","term_name":"cerebral cortex tangential migration","termid":"GO:0021800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"substrate-dependent cerebral cortex tangential migration","termid":"GO:0021825"}


id: GO:0043828
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-methylaminomethyl-2-thiouridine + selenophosphate = 5-methylaminomethyl-2-selenouridine + phosphate (at the wobble position in tRNA).","definition_xrefs":["PMID:14594807","RHEA:42716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"selenotransferase activity","termid":"GO:0016785"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0140101","GO:0003674","GO:0016740","GO:0003824","GO:0140098"],"is_obsolete":false,"name":"tRNA 2-selenouridine synthase activity","secondary_identifiers":["EC:2.9.1.3","MetaCyc:RXN0-2281"],"termid":"GO:0043828"}


id: GO:1900573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving emodin.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"emodin metabolic process","synonyms":[{"name":"emodin metabolism","type":"exact"}],"termid":"GO:1900573"}


id: GO:0035780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of CD80, a CD marker that occurs on antigen presenting cells such as activated B cells and monocytes that provides a co-stimulatory signal necessary for T cell activation and survival.","definition_xrefs":["GOC:BHF","GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein biosynthetic process","termid":"GO:0009101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD80 biosynthetic process","synonyms":[{"name":"CD80 anabolism","type":"exact"},{"name":"CD80 biosynthesis","type":"exact"},{"name":"CD80 formation","type":"exact"},{"name":"CD80 synthesis","type":"exact"}],"termid":"GO:0035780"}


id: PBO:0071376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30","termid":"PBO:0071376"}


id: GO:0071704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving an organic substance, any molecular entity containing carbon.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete organic substance metabolic process (obsolete GO:0071704)","synonyms":[{"name":"organic molecular entity metabolic process","type":"exact"},{"name":"organic molecular entity metabolism","type":"exact"},{"name":"organic substance metabolism","type":"exact"}],"termid":"GO:0071704"}


id: PBO:0114071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase 9","termid":"PBO:0114071"}


id: GO:0070657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of a neuromast following its loss or destruction.","definition_xrefs":["PMID:19381250","GOC:dsf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mechanosensory epithelium regeneration","termid":"GO:0070655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromast regeneration","termid":"GO:0070657"}


id: MOD:01963
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(2,4-diacetamido-2,4,6-trideoxy-D-glucosyl)-L-serine.","definition_xrefs":["RESID:AA0607","PubMed:23030644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-serine","termid":"MOD:00002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"O-(2,4-diacetamido-2,4,6-trideoxy-D-glucosyl)-L-serine","synonyms":[{"name":"(2S)-2-amino-4-[(2,4-diacetamido-2,4,6-trideoxy-beta-D-glucopyranosyl)oxy]propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (DATDGlc) serine","type":"exact"},{"name":"DABA","type":"exact"},{"name":"DATDH","type":"exact"},{"name":"DiNAcBac","type":"exact"},{"name":"O-(2,4-diacetamido-2,4,6-trideoxy-D-glucosyl)-L-serine","type":"exact"},{"name":"O-[2,4-bis(acetylamino)-2,4,6-trideoxy-beta-D-glucopyranosyl]-L-serine","type":"exact"},{"name":"O-[N,N-diacetylbacillosaminyl]serine","type":"exact"},{"name":"O-[N2,N4-diacetylbacillosaminyl]serine","type":"exact"}],"termid":"MOD:01963"}


id: GO:0050588
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8'-apo-beta-carotenol + O2 = (E,E)-7-hydroxy-6-methylhepta-3,5-dienal + 14'-apo-beta-carotenal.","definition_xrefs":["EC:1.13.11.67","RHEA:26023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"apo-beta-carotenoid-14',13'-dioxygenase activity","secondary_identifiers":["MetaCyc:1.13.12.12-RXN","KEGG_REACTION:R08889"],"synonyms":[{"name":"8'-apo-beta-carotenol:O2 oxidoreductase activity","type":"related"},{"name":"apo-b-carotenoid-14',13'-dioxygenase activity","type":"exact"}],"termid":"GO:0050588"}


id: PBO:0068645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 26, pseudogene","termid":"PBO:0068645"}


id: PBO:0058504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5694","termid":"PBO:0058504"}


id: PBO:0050561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine rich glycoprotein","termid":"PBO:0050561"}


id: FYPO:0007937
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the number of sites of DNA breakpoint junctions is greater than normal during stationary phase.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of DNA breakpoint junctions","termid":"FYPO:0007936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"increased number of DNA breakpoint junctions during stationary phase","termid":"FYPO:0007937"}


id: PBO:0077962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 15-1","termid":"PBO:0077962"}


id: PBO:0030599
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_substance_in_vacuole","termid":"PBO:0030599"}


id: GO:0032367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cholesterol, cholest-5-en-3-beta-ol, within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholesterol transport","termid":"GO:0030301"},{"relation_name":"is_a","term_name":"intracellular sterol transport","termid":"GO:0032366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"intracellular cholesterol transport","termid":"GO:0032367"}


id: PBO:0068009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 311","termid":"PBO:0068009"}


id: PBO:0060583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 20","termid":"PBO:0060583"}


id: GO:0019455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown, via the compound cystine, of L-cysteine, catalyzed by the enzyme cystine reductase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cysteine catabolic process via cystine","termid":"GO:0019453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0008150","GO:0044248","GO:0006520"],"is_obsolete":false,"name":"L-cysteine catabolic process via cystine, using cystine reductase","synonyms":[{"name":"L-cysteine breakdown via cystine, using cystine reductase","type":"exact"},{"name":"L-cysteine degradation via cystine, using cystine reductase","type":"exact"}],"termid":"GO:0019455"}


id: PBO:0080138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VASH1 antisense RNA 1","termid":"PBO:0080138"}


id: PBO:0000635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G-protein signaling (RGS) domain (predicted)","termid":"PBO:0000635"}


id: FYPO:0007114
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the amount, distribution, and morphology of microtubule bundles are normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal microtubule bundle","synonyms":[{"name":"normal MT bundle","type":"exact"},{"name":"normal microtubule array","type":"related"},{"name":"normal microtubule bundle physical object quality","type":"exact"}],"termid":"FYPO:0007114"}


id: FYPO:0000009
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which adhesion of a cell to a substrate or another cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal cell adhesion","termid":"FYPO:0001872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell adhesion during vegetative growth","synonyms":[{"name":"abnormal cell adhesion during mitotic cell cycle","type":"related"},{"name":"adhesion defects during vegetative growth","type":"exact"}],"termid":"FYPO:0000009"}


id: GO:0007382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of the characteristic structures of the maxillary segment following establishment of segment boundaries. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of segmental identity, head","termid":"GO:0007380"},{"relation_name":"part_of","term_name":"posterior head segmentation","termid":"GO:0035289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of segmental identity, maxillary segment","termid":"GO:0007382"}


id: PBO:0069399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 659, pseudogene","termid":"PBO:0069399"}


id: PBO:0029516
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_vegetative_cell_population_with_abnormal_cell_shape_(obsolete_FYPO:0002198)","termid":"PBO:0029516"}


id: GO:0102570
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: keto-phenylpyruvate + L-tyrosine = L-phenylalanine + 3-(4-hydroxyphenyl)pyruvate.","definition_xrefs":["EC:2.6.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016769"],"is_obsolete":false,"name":"tyrosine:phenylpyruvate aminotransferase activity","secondary_identifiers":["MetaCyc:RXN-15200"],"termid":"GO:0102570"}


id: PBO:0075376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 13","termid":"PBO:0075376"}


id: GO:1901609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vesicle transport along microtubule.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"regulation of vesicle transport along microtubule","termid":"GO:1901608"},{"relation_name":"negatively_regulates","term_name":"vesicle transport along microtubule","termid":"GO:0047496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of vesicle transport along microtubule","synonyms":[{"name":"down regulation of microtubule-based vesicle localization","type":"exact"},{"name":"down regulation of vesicle transport along microtubule","type":"exact"},{"name":"down-regulation of microtubule-based vesicle localization","type":"exact"},{"name":"down-regulation of vesicle transport along microtubule","type":"exact"},{"name":"downregulation of microtubule-based vesicle localization","type":"exact"},{"name":"downregulation of vesicle transport along microtubule","type":"exact"},{"name":"inhibition of microtubule-based vesicle localization","type":"exact"},{"name":"inhibition of vesicle transport along microtubule","type":"narrow"},{"name":"negative regulation of microtubule-based vesicle localization","type":"exact"}],"termid":"GO:1901609"}


id: PBO:0044181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catenin delta 1","termid":"PBO:0044181"}


id: PBO:0029604
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_transporter_activity","termid":"PBO:0029604"}


id: PBO:0027574
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_envelope_morphology_during_mitosis","termid":"PBO:0027574"}


id: GO:0072281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a mesenchymal stem cell that contributes to the shaping of a nephronin the metanephros. A mesenchymal stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized mesenchymal cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in mesonephros development","termid":"GO:0061208"},{"relation_name":"is_a","term_name":"mesenchymal stem cell differentiation involved in nephron morphogenesis","termid":"GO:0072037"},{"relation_name":"is_a","term_name":"cell differentiation involved in metanephros development","termid":"GO:0072202"},{"relation_name":"part_of","term_name":"metanephric nephron morphogenesis","termid":"GO:0072273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal stem cell differentiation involved in metanephric nephron morphogenesis","termid":"GO:0072281"}


id: PBO:0039541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 37","termid":"PBO:0039541"}


id: PBO:0085942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mutant sensitive to 6-azauracil (6AU) and mycophenolic acid (MPA)","termid":"PBO:0085942"}


id: PBO:0038775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein T3","termid":"PBO:0038775"}


id: PBO:0005056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transporter Ght1","termid":"PBO:0005056"}


id: PBO:0110471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COA1 pseudogene 1","termid":"PBO:0110471"}


id: GO:1900423
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A positive regulation of transcription from RNA polymerase II promoter that results in positive regulation of mating type switching.","definition_xrefs":["GOC:TermGenie","PMID:8804308"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of mating type switching by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900423)","synonyms":[{"name":"activation of mating type switching by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"stimulation of mating type switching by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up regulation of mating type switching by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of mating type switching by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of mating type switching by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900423"}


id: PBO:0034663
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-telomere_assembly_at_double-strand_break_site","termid":"PBO:0034663"}


id: FYPO:0009082
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a combination of potassium chloride and methyl methanesulfonate. Cells stop growing (and may die) at concentrations of potassium chloride and methyl methanesulfonate that allow wild type cells to grow.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0002683","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to potassium chloride and methyl methanesulfonate","synonyms":[{"name":"hypersensitive to potassium chloride and MMS","type":"exact"},{"name":"hypersensitive to potassium chloride and methyl methanesulfonate","type":"exact"},{"name":"sensitive to potassium chloride and MMS","type":"exact"},{"name":"sensitive to potassium chloride and MMS during vegetative growth","type":"exact"},{"name":"sensitive to potassium chloride and MMS in combination","type":"exact"},{"name":"sensitive to potassium chloride and methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"sensitive to potassium chloride and methyl methanesulfonate in combination","type":"exact"}],"termid":"FYPO:0009082"}


id: PBO:0088405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (cytosine-5-)-methyltransferase","termid":"PBO:0088405"}


id: PBO:0039109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AHNAK nucleoprotein 2","termid":"PBO:0039109"}


id: PBO:0059835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial fission regulator 1","termid":"PBO:0059835"}


id: PBO:0109433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-DNA covalent cross-linking repair protein","termid":"PBO:0109433"}


id: GO:0010399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the alternating alpha-(1->2)-linked rhamnose and alpha-(1->2)-linked B-galacturonic acid residues of the rhamnogalacturonan I backbone.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhamnogalacturonan I metabolic process","termid":"GO:0010395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0005975"],"is_obsolete":false,"name":"rhamnogalacturonan I backbone metabolic process","synonyms":[{"name":"rhamnogalacturonan I backbone metabolism","type":"exact"}],"termid":"GO:0010399"}


id: GO:0008597
data:
  {"annotated_genes":["SJAG_03793","SJAG_04871"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84763,114749],"is_not":false,"summary":null,"term":"GO:0008597"}]},"cv_name":"molecular_function","definition":"Binds to and modulates of the activity of the enzyme calcium-dependent protein serine/threonine phosphatase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphatase regulator activity","termid":"GO:0019888"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03793":null,"SJAG_04871":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0030234","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"calcium-dependent protein serine/threonine phosphatase regulator activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-139906"],"synonyms":[{"name":"calcium-dependent protein serine/threonine phosphatase, intrinsic regulator activity","type":"narrow"}],"termid":"GO:0008597","terms_by_termid":{"GO:0008597":null}}


id: GO:0032992
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A macromolecular complex containing separate protein and carbohydrate molecules. Separate in this context means not covalently bound to each other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein-carbohydrate complex","termid":"GO:0032992"}


id: GO:1904715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chaperone-mediated autophagy.","definition_xrefs":["GOC:TermGenie","PMID:20176123","GOC:PARL","GO_REF:0000058","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of autophagy","termid":"GO:0010507"},{"relation_name":"is_a","term_name":"negative regulation of protein catabolic process","termid":"GO:0042177"},{"relation_name":"is_a","term_name":"regulation of chaperone-mediated autophagy","termid":"GO:1904714"},{"relation_name":"negatively_regulates","term_name":"chaperone-mediated autophagy","termid":"GO:0061684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006914"},{"rel_name":"negatively_regulates","termid":"GO:0030163"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"negatively_regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0030163","GO:0006914"],"is_obsolete":false,"name":"negative regulation of chaperone-mediated autophagy","synonyms":[{"name":"down regulation of CMA","type":"related"},{"name":"down regulation of chaperone-mediated autophagy","type":"exact"},{"name":"down-regulation of CMA","type":"related"},{"name":"down-regulation of chaperone-mediated autophagy","type":"exact"},{"name":"downregulation of CMA","type":"related"},{"name":"downregulation of chaperone-mediated autophagy","type":"exact"},{"name":"inhibition of CMA","type":"related"},{"name":"inhibition of chaperone-mediated autophagy","type":"narrow"},{"name":"negative regulation of CMA","type":"related"}],"termid":"GO:1904715"}


id: PBO:0072513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 42","termid":"PBO:0072513"}


id: GO:0120058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of any small intestinal transit process, the migration of ingested material along the length of the small intestine.","definition_xrefs":["PMID:15890336","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of digestive system process","termid":"GO:0060456"},{"relation_name":"is_a","term_name":"regulation of small intestinal transit","termid":"GO:0120057"},{"relation_name":"positively_regulates","term_name":"small intestinal transit","termid":"GO:0120055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of small intestinal transit","synonyms":[{"name":"positive regulation of small bowel transit","type":"exact"},{"name":"positive regulation of small intestine transit","type":"exact"}],"termid":"GO:0120058"}


id: GO:0006501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a lipid group to the carboxy-terminus of a protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein lipidation","termid":"GO:0006497"},{"relation_name":"is_a","term_name":"C-terminal protein amino acid modification","termid":"GO:0018410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042158"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0042158"],"is_obsolete":false,"name":"C-terminal protein lipidation","termid":"GO:0006501"}


id: GO:0030584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a sporocarp over time, from its formation to the mature structure. The sporocarp is a spore bearing fruiting body organ. An example of this process is found in the Fungal species Coprinopsis cinerea.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive fruiting body development","termid":"GO:0030582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sporocarp development","synonyms":[{"name":"fruiting body development","type":"broad"}],"termid":"GO:0030584"}


id: MOD:01982
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from RESID","definition_xrefs":["RESID:AA0619","PubMed:23818633","PubMed:23978223","ChEBI:17750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated glycine","termid":"MOD:00714"},{"relation_name":"is_a","term_name":"alpha-amino trimethylated protonated-residue","termid":"MOD:01698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N,N-trimethylglycine","synonyms":[{"name":"(trimethylammonio)ethanoic acid","type":"exact"},{"name":"1-carboxy-N,N,N-trimethylmethanazanium","type":"exact"},{"name":"2-trimethylammonioacetate","type":"exact"},{"name":"MOD_RES N,N,N-trimethylglycine","type":"exact"},{"name":"N,N,N-trimethylglycine cation","type":"exact"},{"name":"N,N,N-trimethylglycinium","type":"exact"},{"name":"N2Me3+Gly","type":"exact"},{"name":"betaine","type":"exact"},{"name":"carboxy-N,N,N-trimethylmethanaminium","type":"exact"},{"name":"carboxymethyl-trimethylazanium","type":"exact"},{"name":"glycine betaine","type":"exact"}],"termid":"MOD:01982"}


id: PBO:0040143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASNSD1 upstream open reading frame","termid":"PBO:0040143"}


id: GO:0052233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of environmental oxygen within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive aerotaxis in other organism involved in symbiotic interaction (obsolete GO:0052233)","synonyms":[{"name":"positive aerotaxis in other organism during symbiotic interaction","type":"related"},{"name":"positive aerotaxis within other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0052233"}


id: GO:0120159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a uridine in rRNA = a pseudouridine in rRNA. Conversion of uridine in an rRNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5.","definition_xrefs":["PMID:28432181","RHEA:54568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudouridine synthase activity","termid":"GO:0009982"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853","GO:0140098"],"is_obsolete":false,"name":"rRNA pseudouridine synthase activity","termid":"GO:0120159"}


id: GO:0098859
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A bundle of cross-linked actin filaments that is part of an actin-based cell protrusion, in which filaments are oriented such that the plus (barbed) ends are at the tip of the protrusion, capped by a tip complex which stabilizes the filaments.","definition_xrefs":["PMID:12566431","PMID:15661519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parallel actin filament bundle","termid":"GO:0097518"},{"relation_name":"part_of","term_name":"actin-based cell projection","termid":"GO:0098858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0005575","GO:0015629"],"is_obsolete":false,"name":"actin filament bundle of actin-based cell projection","termid":"GO:0098859"}


id: MOD:00170
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-glycyl-glycosylphosphatidylinositolethanolamine.","definition_xrefs":["PubMed:2341397","RESID:AA0161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylphosphatidylinositolated residue","termid":"MOD:00818"},{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-glycyl-glycosylphosphatidylinositolethanolamine","synonyms":[{"name":"GPIGly","type":"exact"},{"name":"LIPID GPI-anchor amidated glycine","type":"exact"},{"name":"N-glycyl-glycosylphosphatidylinositolethanolamine","type":"exact"}],"termid":"MOD:00170"}


id: GO:0060514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The close range interaction of the urogenital sinus mesenchyme and the urogenital sinus epithelium that causes the cells of the urogenital sinus epithelium to change their fates and specify the development of the prostate gland.","definition_xrefs":["GOC:dph","PMID:18977204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organ induction","termid":"GO:0001759"},{"relation_name":"is_a","term_name":"regulation of prostatic bud formation","termid":"GO:0060685"},{"relation_name":"is_a","term_name":"positive regulation of morphogenesis of an epithelium","termid":"GO:1905332"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"prostate field specification","termid":"GO:0060515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prostate induction","termid":"GO:0060514"}


id: PBO:0045176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member A4","termid":"PBO:0045176"}


id: PBO:0091929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase, unknown specificity","termid":"PBO:0091929"}


id: GO:1902242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of copal-8-ol diphosphate(3-).","definition_xrefs":["PMID:22672125","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid catabolic process","termid":"GO:0009395"},{"relation_name":"is_a","term_name":"diterpenoid catabolic process","termid":"GO:0016103"},{"relation_name":"is_a","term_name":"copal-8-ol diphosphate(3-) metabolic process","termid":"GO:1902241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044248"],"is_obsolete":false,"name":"copal-8-ol diphosphate(3-) catabolic process","synonyms":[{"name":"copal-8-ol diphosphate(3-) breakdown","type":"exact"},{"name":"copal-8-ol diphosphate(3-) catabolism","type":"exact"},{"name":"copal-8-ol diphosphate(3-) degradation","type":"exact"}],"termid":"GO:1902242"}


id: PBO:0076054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stomatin","termid":"PBO:0076054"}


id: PR:Q9P7M5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An H/ACA ribonucleoprotein complex subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00663","PRO:DNx","PANTHER:PTHR13305:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H/ACA ribonucleoprotein complex subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP27G11.13c","secondary_identifiers":["UniProtKB:Q9P7M5"],"synonyms":[{"name":"Spom972h-NOP10","type":"exact"},{"name":"nucleolar protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"nucleolar protein family A member 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"snoRNP protein nop10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7M5"}


id: PBO:0064672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 7","termid":"PBO:0064672"}


id: PBO:0046892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM13B antisense RNA 1","termid":"PBO:0046892"}


id: PBO:0066087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS p21 protein activator 1","termid":"PBO:0066087"}


id: FYPO:0004450
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to calcium ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to calcium ion","synonyms":[{"name":"normal protein phosphorylation during cellular response to calcium","type":"exact"},{"name":"normal protein phosphorylation during cellular response to calcium ion during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to calcium ion during vegetative growth","type":"exact"}],"termid":"FYPO:0004450"}


id: PBO:0048086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 7","termid":"PBO:0048086"}


id: PBO:0071527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 30","termid":"PBO:0071527"}


id: GO:0039621
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=13 symmetry. The T=13 capsid is composed of 12 pentameric and 120 hexameric capsomeres.","definition_xrefs":["VZ:260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=13 icosahedral viral capsid","termid":"GO:0039621"}


id: GO:0043188
data:
  {"annotated_genes":["SJAG_01835"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103904],"is_not":false,"summary":null,"term":"GO:0043188"}]},"cv_name":"cellular_component","definition":"The cell wall material that surrounds the septum in fungal cells.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"fungal-type cell wall","termid":"GO:0009277"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"cell septum edging","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043188","terms_by_termid":{"GO:0043188":null}}


id: PBO:0071270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL24 pseudogene 4","termid":"PBO:0071270"}


id: FYPO:0001167
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ATPase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000661","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abnormal ATPase activity","termid":"FYPO:0001167"}


id: GO:0160069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of surfactant by a cell or tissue.","definition_xrefs":["PMID:19824815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion","termid":"GO:0046903"},{"relation_name":"part_of","term_name":"surfactant homeostasis","termid":"GO:0043129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"surfactant secretion","termid":"GO:0160069"}


id: PBO:0088662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartic protease, yapsin family, unknown specificity Yps1","termid":"PBO:0088662"}


id: GO:0046197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of orcinol (5-methyl-1,3-benzenediol), an aromatic compound derived from the fermentation of lichen and synthesized by some higher plants.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orcinol metabolic process","termid":"GO:0018940"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"orcinol biosynthetic process","synonyms":[{"name":"orcinol anabolism","type":"exact"},{"name":"orcinol biosynthesis","type":"exact"},{"name":"orcinol formation","type":"exact"},{"name":"orcinol synthesis","type":"exact"}],"termid":"GO:0046197"}


id: GO:0030801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving cyclic nucleotides.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cyclic nucleotide metabolic process (obsolete GO:0030801)","synonyms":[{"name":"activation of cyclic nucleotide metabolic process","type":"narrow"},{"name":"positive regulation of cyclic nucleotide metabolism","type":"exact"},{"name":"stimulation of cyclic nucleotide metabolic process","type":"narrow"},{"name":"up regulation of cyclic nucleotide metabolic process","type":"exact"},{"name":"up-regulation of cyclic nucleotide metabolic process","type":"exact"},{"name":"upregulation of cyclic nucleotide metabolic process","type":"exact"}],"termid":"GO:0030801"}


id: PBO:0030231
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_increase_in_steady-state_intracellular_calcium_level_following_extracellular_calcium_stimulus_(obsolete_FYPO:0001467)","termid":"PBO:0030231"}


id: GO:0055008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of cardiac muscle tissue are generated and organized.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle tissue morphogenesis","termid":"GO:0060415"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"},{"relation_name":"part_of","term_name":"cardiac muscle tissue development","termid":"GO:0048738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle tissue morphogenesis","synonyms":[{"name":"heart muscle morphogenesis","type":"exact"},{"name":"myocardium morphogenesis","type":"broad"}],"termid":"GO:0055008"}


id: GO:0061028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of a barrier between endothelial cell layers, such as those in the brain, lung or intestine, to exert specific and selective control over the passage of water and solutes, thus allowing formation and maintenance of compartments that differ in fluid and solute composition.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial cell development","termid":"GO:0001885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of endothelial barrier","termid":"GO:0061028"}


id: PBO:0054246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1628","termid":"PBO:0054246"}


id: GO:0007525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the somatic muscle over time, from its formation to the mature structure. Somatic muscles are striated muscle structures that connect to the exoskeleton or cuticle.","definition_xrefs":["GOC:jid","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle structure development","termid":"GO:0061061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic muscle development","termid":"GO:0007525"}


id: PATO:0002262
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a protein or a molecule by virtue of the addition of a phosphate (PO4) group to the bearer.","direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylation","termid":"PATO:0002262"}


id: GO:0032918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of spermidine by addition of acetyl groups.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermidine metabolic process","termid":"GO:0008216"},{"relation_name":"is_a","term_name":"polyamine acetylation","termid":"GO:0032917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermidine acetylation","termid":"GO:0032918"}


id: GO:0055116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dormancy process that results in entry into reproductive diapause. Reproductive diapause is a form of diapause where the organism itself will remain fully active, including feeding and other routine activities, but the reproductive organs experience a tissue-specific reduction in metabolism, with characteristic triggering and releasing stimuli.","definition_xrefs":["GOC:ds","GOC:jid","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"entry into diapause","termid":"GO:0055115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"entry into reproductive diapause","termid":"GO:0055116"}


id: GO:0002262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of myeloid cells such that the total number of myeloid cells within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["GOC:add","CL:0000763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"is_a","term_name":"homeostasis of number of cells","termid":"GO:0048872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myeloid cell homeostasis","termid":"GO:0002262"}


id: PBO:0034029
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_triage_status","termid":"PBO:0034029"}


id: FYPO:0007902
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic cytokinesis begins at the same time as normal.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cytokinesis","termid":"FYPO:0001367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal onset of cytokinesis","termid":"FYPO:0007902"}


id: GO:0070802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metula development, a process that leads to the formation of metulae. Metulae are elongated mononucleate cells that bud from the surface of the conidiophore tip.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"is_a","term_name":"regulation of conidiophore development","termid":"GO:0070793"},{"relation_name":"regulates","term_name":"metula development","termid":"GO:0070789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metula development","termid":"GO:0070802"}


id: GO:0097352
data:
  {"annotated_genes":["SJAG_02414","SJAG_06309","SJAG_03345","SJAG_02699","SJAG_02433"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85292,86111,109805],"is_not":false,"summary":null,"term":"GO:0097352"},{"annotations":[90670],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016240"},{"annotations":[93690],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1901098"}]},"cv_name":"biological_process","definition":"Removal of PI3P and Atg8/LC3 after the closure of the phagophore and before the fusion with the endosome/lysosome (e.g. mammals and insects) or vacuole (yeast), and that very likely destabilizes other Atg proteins and thus enables their efficient dissociation and recycling.","definition_xrefs":["GOC:lf","GOC:autophagy","PMID:28077293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"},{"relation_name":"part_of","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02414":null,"SJAG_02433":null,"SJAG_02699":null,"SJAG_03345":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006914"],"is_obsolete":false,"name":"autophagosome maturation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000046"],"synonyms":[{"name":"autophagic vacuole fusion","type":"exact"},{"name":"autophagic vacuole maturation","type":"exact"},{"name":"autophagosome fusion","type":"related"}],"termid":"GO:0097352","terms_by_termid":{"GO:0016240":null,"GO:0097352":null,"GO:1901098":null}}


id: FYPO:0000673
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which septum assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal septum assembly","synonyms":[{"name":"normal division septum assembly","type":"exact"},{"name":"normal septation","type":"broad"},{"name":"normal septum assembly during mitotic cell cycle","type":"related"},{"name":"normal septum assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0000673"}


id: PBO:0066550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 13","termid":"PBO:0066550"}


id: PBO:0036334
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by human DLP1","termid":"PBO:0036334"}


id: GO:1901136
data:
  {"annotated_genes":["SJAG_02580","SJAG_00605","SJAG_03660","SJAG_02135","SJAG_00839","SJAG_01012","SJAG_06621","SJAG_00027","SJAG_05314","SJAG_00633","SJAG_04495","SJAG_04192","SJAG_03828","SJAG_00620","SJAG_01310","SJAG_03373","SJAG_04048","SJAG_01858","SJAG_02369","SJAG_02959","SJAG_02009","SJAG_02107","SJAG_00685","SJAG_01359","SJAG_00409","SJAG_00957","SJAG_03903","SJAG_06622","SJAG_02785","SJAG_03771","SJAG_03032","SJAG_04487","SJAG_03676","SJAG_03852","SJAG_02945","SJAG_00461","SJAG_02481","SJAG_02796","SJAG_04334","SJAG_04927","SJAG_01673","SJAG_04870"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901911"},{"annotations":[83623,83622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"},{"annotations":[112554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006198"},{"annotations":[105526,105061,105529,94066,101576,99492,105062,105064,91058,105523,105059,105060,99754,94346,101941,105058,105063,105524,90567,101575,105525,105527,101940,112524,100581,101574,105528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[97597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006032"},{"annotations":[104508,85227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009972"},{"annotations":[95065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"},{"annotations":[95067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"},{"annotations":[90020,102615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046168"},{"annotations":[100583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006096"},{"annotations":[84642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[94262,107725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[89583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006058"},{"annotations":[74894,72076],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[87098,108323,86683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006152"},{"annotations":[86684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046135"},{"annotations":[85246],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"},{"annotations":[89584,91764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097466"},{"annotations":[110119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of carbohydrate derivative.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00409":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00620":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_00957":null,"SJAG_01012":null,"SJAG_01310":null,"SJAG_01359":null,"SJAG_01673":null,"SJAG_01858":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02481":null,"SJAG_02580":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_02959":null,"SJAG_03032":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03676":null,"SJAG_03771":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04487":null,"SJAG_04495":null,"SJAG_04870":null,"SJAG_04927":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carbohydrate derivative catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"carbohydrate derivative breakdown","type":"exact"},{"name":"carbohydrate derivative catabolism","type":"exact"},{"name":"carbohydrate derivative degradation","type":"exact"}],"termid":"GO:1901136","terms_by_termid":{"GO:0006032":null,"GO:0006058":null,"GO:0006096":null,"GO:0006110":null,"GO:0006152":null,"GO:0006154":null,"GO:0006198":null,"GO:0006256":null,"GO:0009972":null,"GO:0035863":null,"GO:0045820":null,"GO:0046081":null,"GO:0046135":null,"GO:0046168":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null,"GO:0097466":null,"GO:1901911":null}}


id: PBO:0081858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF790 antisense RNA 1","termid":"PBO:0081858"}


id: GO:0006658
data:
  {"annotated_genes":["SJAG_01233","SJAG_03076","SJAG_02100"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97497,110839],"is_not":false,"summary":null,"term":"GO:0006658"},{"annotations":[110838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006659"},{"annotations":[89961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006660"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving phosphatidylserines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of L-serine. They are important constituents of cell membranes.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"glycerophospholipid metabolic process","termid":"GO:0006650"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01233":null,"SJAG_02100":null,"SJAG_03076":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylserine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"phosphatidylserine metabolism","type":"exact"}],"termid":"GO:0006658","terms_by_termid":{"GO:0006658":null,"GO:0006659":null,"GO:0006660":null}}


id: PBO:0003810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex phosphatidylinositol pseudokinase Tra1","termid":"PBO:0003810"}


id: PBO:0060399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N4BPL2 intronic transcript 2","termid":"PBO:0060399"}


id: GO:0098908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in a neuron. This typically occurs via modulation of the activity or expression of voltage-gated ion channels.","definition_xrefs":["GOC:dph","GOC:isa_complete","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmission of nerve impulse","termid":"GO:0051969"},{"relation_name":"is_a","term_name":"regulation of action potential","termid":"GO:0098900"},{"relation_name":"regulates","term_name":"neuronal action potential","termid":"GO:0019228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neuronal action potential","synonyms":[{"name":"generation of action potential","type":"related"}],"termid":"GO:0098908"}


id: PBO:0064915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP4R2 pseudogene 4","termid":"PBO:0064915"}


id: GO:0098022
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A type of capsid decoration composed of fiber structures.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral capsid, decoration","termid":"GO:0098021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral capsid, fiber","synonyms":[{"name":"head/capsid fiber","type":"related"}],"termid":"GO:0098022"}


id: PR:Q9P801
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC777.17c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L9-like mitochondrial ribosomal protein SPCC777.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.17c","synonyms":[{"name":"54S ribosomal protein L9, mitochondrial (Schizosaccharomyces pombe 972h-)","type":"related"},{"name":"Spom972h-SPCC777.17c","type":"exact"}],"termid":"PR:Q9P801"}


id: PBO:0065752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrin domain containing 5","termid":"PBO:0065752"}


id: PBO:0090556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assembly chaperone for ribosomal protein Rpl4, TPR repeat protein Acl4","termid":"PBO:0090556"}


id: CHEBI:26948
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine","termid":"CHEBI:26948"}


id: PBO:0054476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1876","termid":"PBO:0054476"}


id: PBO:0071542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 7","termid":"PBO:0071542"}


id: PBO:0002470
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.6.1.19","termid":"PBO:0002470"}


id: PBO:0077475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 198","termid":"PBO:0077475"}


id: GO:0006572
data:
  {"annotated_genes":["SJAG_00493"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102895],"is_not":false,"summary":null,"term":"GO:0006572"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tyrosine, an aromatic amino acid, 2-amino-3-(4-hydroxyphenyl)propanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine metabolic process","termid":"GO:0006570"},{"relation_name":"is_a","term_name":"aromatic amino acid family catabolic process","termid":"GO:0009074"},{"relation_name":"is_a","term_name":"erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process","termid":"GO:1902222"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00493":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"tyrosine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tyrosine breakdown","type":"exact"},{"name":"tyrosine catabolism","type":"exact"},{"name":"tyrosine degradation","type":"exact"}],"termid":"GO:0006572","terms_by_termid":{"GO:0006572":null}}


id: GO:0086084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein or protein complex that results in the connection of a Purkinje myocyte with an ventricular cardiac muscle cell and contributes to the communication between the two cells.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding involved in heterotypic cell-cell adhesion","termid":"GO:0086080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098631"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0098631","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cell adhesive protein binding involved in Purkinje myocyte-ventricular cardiac muscle cell communication","termid":"GO:0086084"}


id: PBO:0053771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1016","termid":"PBO:0053771"}


id: GO:0046087
data:
  {"annotated_genes":["SJAG_01673","SJAG_03771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85227,104508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009972"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving cytidine, cytosine riboside, a widely distributed nucleoside.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside metabolic process","termid":"GO:0046131"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01673":null,"SJAG_03771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"cytidine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytidine metabolism","type":"exact"}],"termid":"GO:0046087","terms_by_termid":{"GO:0009972":null}}


id: FYPO:0003095
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is viable and elongated, and continues to become longer over successive generations. The cell also undergoes mitosis beginning when the cell is longer than normal.","definition_xrefs":["PMID:24013504","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable elongated vegetative cell, elongated upon mitotic entry","termid":"FYPO:0003481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000004","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000005","FYPO:0000631"],"is_obsolete":false,"name":"viable elongated vegetative cell, with progressive elongation","synonyms":[{"name":"progressively elongating viable vegetative cell","type":"exact"}],"termid":"FYPO:0003095"}


id: GO:1903214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein targeting to mitochondrion.","definition_xrefs":["GOC:bf","GOC:PARL","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein targeting","termid":"GO:1903533"},{"relation_name":"is_a","term_name":"regulation of establishment of protein localization to mitochondrion","termid":"GO:1903747"},{"relation_name":"regulates","term_name":"protein targeting to mitochondrion","termid":"GO:0006626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006605"}],"interesting_parent_ids":["GO:0008150","GO:0006605"],"is_obsolete":false,"name":"regulation of protein targeting to mitochondrion","synonyms":[{"name":"regulation of mitochondrial protein import","type":"related"},{"name":"regulation of mitochondrial translocation","type":"related"},{"name":"regulation of protein import into mitochondrion","type":"exact"},{"name":"regulation of protein targeting to mitochondria","type":"exact"},{"name":"regulation of protein-mitochondrial targeting","type":"exact"}],"termid":"GO:1903214"}


id: PBO:0053115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipocalin 1 pseudogene 2","termid":"PBO:0053115"}


id: GO:0018677
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pentachlorophenol + NADPH + H+ + O2 = tetrachlorohydroquinone + NADP+ + chloride.","definition_xrefs":["EC:1.14.13.50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"pentachlorophenol monooxygenase activity","secondary_identifiers":["MetaCyc:PCP4MONO-RXN","RHEA:18685","UM-BBD_enzymeID:r0313"],"synonyms":[{"name":"PCB 4-monooxygenase activity","type":"related"},{"name":"PCB4MO activity","type":"related"},{"name":"PCP hydroxylase activity","type":"related"},{"name":"PcpB","type":"related"},{"name":"pentachlorophenol 4-monooxygenase activity","type":"exact"},{"name":"pentachlorophenol dechlorinase activity","type":"related"},{"name":"pentachlorophenol dehalogenase activity","type":"related"},{"name":"pentachlorophenol hydroxylase activity","type":"exact"},{"name":"pentachlorophenol,NADPH:oxygen oxidoreductase (hydroxylating, dechlorinating)","type":"related"}],"termid":"GO:0018677"}


id: PBO:0047320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAT atypical cadherin 4","termid":"PBO:0047320"}


id: PBO:0061682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUP107 divergent transcript","termid":"PBO:0061682"}


id: PR:Q09714
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC18B11.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18B11.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18B11.08c","synonyms":[{"name":"Spom972h-SPAC18B11.08c","type":"exact"}],"termid":"PR:Q09714"}


id: GO:0002509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction in the central lymphoid organs directed at self antigens.","definition_xrefs":["GOC:jal","PMID:16460922","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central tolerance induction","termid":"GO:0002508"},{"relation_name":"is_a","term_name":"tolerance induction to self antigen","termid":"GO:0002513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central tolerance induction to self antigen","termid":"GO:0002509"}


id: PBO:0111840
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARID domain","termid":"PBO:0111840"}


id: GO:0060864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals that increases the rate or extent of floral organ abscission.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of floral organ abscission by small GTPase mediated signal transduction (obsolete GO:0060864)","termid":"GO:0060864"}


id: GO:0043628
data:
  {"annotated_genes":["SJAG_01867","SJAG_04942","SJAG_01836","SJAG_02622","SJAG_02621"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87887,88855,114293],"is_not":false,"summary":null,"term":"GO:0043628"},{"annotations":[114267,103912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990431"},{"annotations":[103914,114270],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990432"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 3' end of a regulatory non-coding RNA molecule.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA 3'-end processing","termid":"GO:0031123"},{"relation_name":"is_a","term_name":"regulatory ncRNA processing","termid":"GO:0070918"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01836":null,"SJAG_01867":null,"SJAG_02621":null,"SJAG_02622":null,"SJAG_04942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulatory ncRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ncRNA 3' end processing","type":"broad"},{"name":"ncRNA 3'-end processing","type":"broad"},{"name":"small regulatory ncRNA 3'-end processing","type":"narrow"}],"termid":"GO:0043628","terms_by_termid":{"GO:0043628":null,"GO:1990431":null,"GO:1990432":null}}


id: PBO:0085109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear transport factor (karyopherin); involved in protein transport between the cytoplasm and nucleoplasm; similar to Nmd5p, Cse1p, Lph2p, and the human cellular apoptosis susceptibility protein, CAS1","termid":"PBO:0085109"}


id: PBO:0004634
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.13","termid":"PBO:0004634"}


id: PBO:0066843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 143","termid":"PBO:0066843"}


id: GO:0032998
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of an Fc-epsilon RI alpha chain and an Fc-epsilon RI gamma chain dimer with or without an Fc-episilon RI beta chain and additional signaling components. The complex functions primarily as an activating receptor for IgE.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fc receptor complex","termid":"GO:0032997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"Fc-epsilon receptor I complex","synonyms":[{"name":"FceRI complex","type":"exact"},{"name":"IgE receptor complex","type":"broad"},{"name":"immunoglobulin E receptor complex","type":"broad"}],"termid":"GO:0032998"}


id: GO:0050306
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 sucrose = D-glucose + 1F-beta-D-fructosylsucrose.","definition_xrefs":["EC:2.4.1.99","MetaCyc:SUCROSE-1F-FRUCTOSYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructosyltransferase activity","termid":"GO:0050738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"sucrose 1F-fructosyltransferase activity","secondary_identifiers":["RHEA:23312","MetaCyc:RXN-1781"],"synonyms":[{"name":"SST activity","type":"related"},{"name":"sucrose 1(F)-fructosyltransferase activity","type":"related"},{"name":"sucrose-sucrose 1-fructosyltransferase activity","type":"related"},{"name":"sucrose:sucrose 1'-beta-D-fructosyltransferase activity","type":"related"},{"name":"sucrose:sucrose 1(F)-beta-D-fructosyltransferase activity","type":"related"},{"name":"sucrose:sucrose 1-fructosyltransferase activity","type":"related"},{"name":"sucrose:sucrose 1F-beta-D-fructosyltransferase activity","type":"related"},{"name":"sucrose:sucrose fructosyltransferase activity","type":"related"}],"termid":"GO:0050306"}


id: PBO:0110194
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_needs_approval_timestamp","termid":"PBO:0110194"}


id: GO:0070963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the directed killing of a gram-negative bacterium by a neutrophil.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of gram-negative bacterium","termid":"GO:0070951"},{"relation_name":"is_a","term_name":"positive regulation of neutrophil mediated killing of bacterium","termid":"GO:0070962"},{"relation_name":"positively_regulates","term_name":"neutrophil-mediated killing of gram-negative bacterium","termid":"GO:0070945"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neutrophil mediated killing of gram-negative bacterium","synonyms":[{"name":"activation of neutrophil mediated killing of gram-negative bacterium","type":"narrow"},{"name":"stimulation of neutrophil mediated killing of gram-negative bacterium","type":"narrow"},{"name":"up regulation of neutrophil mediated killing of gram-negative bacterium","type":"exact"},{"name":"up-regulation of neutrophil mediated killing of gram-negative bacterium","type":"exact"},{"name":"upregulation of neutrophil mediated killing of gram-negative bacterium","type":"exact"}],"termid":"GO:0070963"}


id: PBO:0089096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane acetate transmembrane transporter","termid":"PBO:0089096"}


id: PBO:0047375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 6","termid":"PBO:0047375"}


id: PBO:0049521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.L variant histone 3","termid":"PBO:0049521"}


id: PBO:0067621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 793, pseudogene","termid":"PBO:0067621"}


id: PBO:0078864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPC7 antisense RNA 1","termid":"PBO:0078864"}


id: FYPO:0005121
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA transcribed from early meiotic genes measured in a cell is lower than normal during the meiotic cell cycle. Early meiotic genes are normally transcribed during pre-meiotic S phase and recombination.","definition_xrefs":["PMID:17927811","PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during meiotic cell cycle","termid":"FYPO:0004630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased level of early meiotic gene mRNA during meiotic cell cycle","synonyms":[{"name":"decreased level of early meiosis gene mRNA during meiotic cell cycle","type":"exact"},{"name":"decreased level of early meiotic gene RNA during meiotic cell cycle","type":"exact"},{"name":"decreased level of early meiotic gene transcripts during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0005121"}


id: FYPO:0001078
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of beta-D-glucan measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal polysaccharide level","termid":"FYPO:0001077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal beta-glucan level","synonyms":[{"name":"normal beta-D-glucan level","type":"exact"},{"name":"normal beta-glucan accumulation","type":"related"},{"name":"normal beta-glucan level during mitotic cell cycle","type":"related"},{"name":"normal beta-glucan level during vegetative growth","type":"exact"},{"name":"normal cellular beta-glucan level","type":"exact"}],"termid":"FYPO:0001078"}


id: GO:1905807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of synapse pruning.","definition_xrefs":["GOC:TermGenie","PMID:27779093","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse pruning","termid":"GO:1905806"},{"relation_name":"is_a","term_name":"negative regulation of synapse organization","termid":"GO:1905809"},{"relation_name":"negatively_regulates","term_name":"synapse pruning","termid":"GO:0098883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of synapse pruning","synonyms":[{"name":"down regulation of synapse disassembly","type":"exact"},{"name":"down-regulation of synapse disassembly","type":"exact"},{"name":"downregulation of synapse disassembly","type":"exact"},{"name":"inhibition of synapse disassembly","type":"narrow"},{"name":"regulation of synapse clearance","type":"broad"},{"name":"regulation of synapse disassembly","type":"broad"},{"name":"regulation of synapse elimination","type":"broad"},{"name":"regulation of synapse removal","type":"broad"}],"termid":"GO:1905807"}


id: MOD:00696
data:
  {"annotated_genes":["SJAG_04551","SJAG_02592","SJAG_02763"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[115614,115615,115616,115691,115726],"is_not":false,"summary":null,"term":"MOD:00696"},{"annotations":[115379,115780,115376,115377,115378,115781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a phosphono group (H2PO3 or 'phosphate').","definition_xrefs":["Unimod:21","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02763":null,"SJAG_04551":null},"genotype_count":0,"is_obsolete":false,"name":"phosphorylated residue","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null,"PMID:32915139":null,"PMID:33791858":null,"PMID:34198697":null},"synonyms":[{"name":"PhosRes","type":"exact"},{"name":"Phospho","type":"related"},{"name":"Phosphorylation","type":"related"},{"name":"Phosphorylation (O of Serine, Threonine, Tyrosine and Aspartate, N epsilon of Lysine)","type":"exact"}],"termid":"MOD:00696","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0036460":null,"GO:0042149":null,"GO:0071475":null,"GO:0120306":null,"GO:1904547":null,"MOD:00046":null,"MOD:00696":null}}


id: GO:0075054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of symbiont penetration peg formation for entry into host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"modulation by symbiont of entry into host","termid":"GO:0052372"},{"relation_name":"regulates","term_name":"penetration peg formation","termid":"GO:0075053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of penetration peg formation","secondary_identifiers":["GO:0075058"],"synonyms":[{"name":"modulation of symbiont penetration peg formation for entry into host","type":"narrow"},{"name":"modulation of symbiont penetration peg initiation","type":"narrow"}],"termid":"GO:0075054"}


id: GO:0048238
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membranes of the smooth endoplasmic reticulum.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum lumen","termid":"GO:0005788"},{"relation_name":"part_of","term_name":"smooth endoplasmic reticulum","termid":"GO:0005790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005783"],"is_obsolete":false,"name":"smooth endoplasmic reticulum lumen","secondary_identifiers":["NIF_Subcellular:sao927884761"],"synonyms":[{"name":"SER lumen","type":"exact"},{"name":"smooth ER lumen","type":"exact"}],"termid":"GO:0048238"}


id: GO:0070009
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a single N-terminal amino acid residue from a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).","direct_ancestors":[{"relation_name":"is_a","term_name":"aminopeptidase activity","termid":"GO:0004177"},{"relation_name":"is_a","term_name":"serine-type exopeptidase activity","termid":"GO:0070008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0003824","GO:0008233","GO:0003674","GO:0140096","GO:0016787"],"is_obsolete":false,"name":"serine-type aminopeptidase activity","termid":"GO:0070009"}


id: PBO:0054427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1823","termid":"PBO:0054427"}


id: PBO:0065066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteoglycan 4","termid":"PBO:0065066"}


id: SO:0001514
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A quality of an insertion where the insert is not in a cytologically inverted orientation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insertion_attribute","termid":"SO:0001512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"direct","termid":"SO:0001514"}


id: PBO:0000899
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds STREP motif","termid":"PBO:0000899"}


