# genes

id: SJAG_04569
data:
  {"cv_annotations":{"biological_process":[{"annotations":[109910],"is_not":false,"summary":null,"term":"GO:0006888"},{"annotations":[109911],"is_not":false,"summary":null,"term":"GO:0006891"},{"annotations":[109912],"is_not":false,"summary":null,"term":"GO:0006886"},{"annotations":[109913],"is_not":false,"summary":null,"term":"GO:0006890"}],"cellular_component":[{"annotations":[109907],"is_not":false,"summary":null,"term":"GO:0030126"},{"annotations":[109908],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[109909],"is_not":false,"summary":null,"term":"GO:0005794"}],"molecular_function":[{"annotations":[109914],"is_not":false,"summary":null,"term":"GO:0038024"},{"annotations":[109915],"is_not":false,"summary":null,"term":"GO:0005198"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_04569","InterPro:IPR006692","InterPro:IPR016391","InterPro:IPR001680","GOA:B6K763","InterPro:IPR020472","InterPro:IPR019775","InterPro:IPR036322","InterPro:IPR017986","InterPro:IPR010714","UniProtKB/TrEMBL:B6K763","EnsemblGenomes-Tr:EEB09367","InterPro:IPR015943"],"deletion_viability":"unknown","disordered_region_coords":[[776,779],[786,787],[791,793],[810,811],[820,821],[837,882]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"clr4","uniquename":"SJAG_04574"},{"name":"ubc4","uniquename":"SJAG_04573"},{"name":"rpn3","uniquename":"SJAG_04572"},{"name":"gpt1","uniquename":"SJAG_04571"},{"name":"aig1","uniquename":"SJAG_04570"},{"name":"cop1","uniquename":"SJAG_04569"},{"name":"dps1","uniquename":"SJAG_04568"},{"uniquename":"SJAG_04567"},{"name":"knk1","uniquename":"SJAG_04566"},{"name":"apl2","uniquename":"SJAG_04565"},{"name":"naa38","uniquename":"SJAG_06449"}],"genes_by_uniquename":{"HGNC:2230":null,"SJAG_04569":null,"SPBPJ4664.04":null,"YDL145C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.25.40.470","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":818,"score":0.0,"start":643}],"model":"3mkqB00","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.130.10.10","interpro_id":"IPR015943","interpro_name":"WD40/YVTN repeat-like-containing domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":327,"score":0.0,"start":1}],"model":"4j87A00","name":"YVTN repeat-like/Quinoprotein amine dehydrogenase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00400","interpro_id":"IPR001680","interpro_name":"WD40 repeat","interpro_type":"Repeat","locations":[{"end":39,"score":16.0,"start":7},{"end":81,"score":0.0004799999878741801,"start":44},{"end":123,"score":0.0008399999933317304,"start":86},{"end":165,"score":1.3000000080864993e-6,"start":128},{"end":239,"score":0.004999999888241291,"start":206},{"end":284,"score":0.0001500000071246177,"start":249}],"model":"PF00400","name":"WD domain, G-beta repeat"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF04053","interpro_id":"IPR006692","interpro_name":"Coatomer, WD associated region","interpro_type":"Domain","locations":[{"end":771,"score":0.0,"start":347}],"model":"PF04053","name":"Coatomer WD associated region"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF06957","interpro_id":"IPR010714","interpro_name":"Coatomer, alpha subunit, C-terminal","interpro_type":"Domain","locations":[{"end":1204,"score":0.0,"start":844}],"model":"PF06957","name":"Coatomer (COPI) alpha subunit C-terminus"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF003354","interpro_id":"IPR016391","interpro_name":"Coatomer subunit alpha","interpro_type":"Family","locations":[{"end":1207,"score":0.0,"start":1}],"model":"PIRSF003354","name":"Coatomer, alpha subunit"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00320","interpro_id":"IPR020472","interpro_name":"G-protein beta WD-40 repeat","interpro_type":"Repeat","locations":[{"end":124,"score":7.300000106624793e-7,"start":110},{"end":166,"score":7.300000106624793e-7,"start":152},{"end":285,"score":7.300000106624793e-7,"start":271}],"model":"PR00320","name":""},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00678","interpro_id":"IPR019775","interpro_name":"WD40 repeat, conserved site","interpro_type":"Conserved_site","locations":[{"end":166,"score":0.0,"start":152},{"end":285,"score":0.0,"start":271}],"model":"PS00678","name":"Trp-Asp (WD) repeats signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50082","interpro_id":"IPR001680","interpro_name":"WD40 repeat","interpro_type":"Repeat","locations":[{"end":48,"score":0.0,"start":7},{"end":90,"score":0.0,"start":49},{"end":132,"score":0.0,"start":91},{"end":174,"score":0.0,"start":133},{"end":249,"score":0.0,"start":208},{"end":293,"score":0.0,"start":252}],"model":"PS50082","name":"Trp-Asp (WD) repeats profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50294","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":84,"score":0.0,"start":49},{"end":123,"score":0.0,"start":91},{"end":167,"score":0.0,"start":133},{"end":241,"score":0.0,"start":208},{"end":286,"score":0.0,"start":252}],"model":"PS50294","name":"Trp-Asp (WD) repeats circular profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR19876","interpro_id":"IPR050844","interpro_name":"Coatomer complex subunit","interpro_type":"Family","locations":[{"end":725,"score":0.0,"start":3}],"model":"PTHR19876:SF1","name":"COATOMER"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00320","interpro_id":"IPR001680","interpro_name":"WD40 repeat","interpro_type":"Repeat","locations":[{"end":39,"score":2.799999952316284,"start":4},{"end":81,"score":4.800000041882413e-8,"start":42},{"end":123,"score":1.1000000199601345e-7,"start":84},{"end":165,"score":1.9999999920083944e-11,"start":126},{"end":240,"score":1.2000000424450263e-6,"start":201},{"end":284,"score":1.0000000116860974e-7,"start":245},{"end":325,"score":22.0,"start":287}],"model":"SM00320","name":"WD40 repeats"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF50978","interpro_id":"IPR036322","interpro_name":"WD40-repeat-containing domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":322,"score":0.0,"start":3}],"model":"0053623","name":"WD40 repeat-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF82171","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":588,"score":5.489999921337585e-7,"start":347}],"model":"0048263","name":"DPP6 N-terminal domain-like"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00200","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":325,"score":0.0,"start":17}],"model":"cd00200","name":""},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd22948","interpro_id":"IPR047312","interpro_name":"Coatomer subunit alpha, WD Associated Region","interpro_type":"Domain","locations":[{"end":779,"score":0.0,"start":331}],"model":"cd22948","name":"Coatomer WD Associated Region from Coatomer Subunit Alpha"}],"location":{"chromosome_name":"supercont5.3","end_pos":609845,"start_pos":606119,"strand":"reverse"},"low_complexity_region_coords":[[856,877]],"name":"cop1","ortholog_annotations":[{"gene_uniquename":"SJAG_04569","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2230","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04569","ortholog_taxonid":4896,"ortholog_uniquename":"SPBPJ4664.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04569","ortholog_taxonid":4932,"ortholog_uniquename":"YDL145C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04569","ortholog_taxonid":4932,"ortholog_uniquename":"YDL145C","reference_uniquename":"PMID:26896847"}],"product":"coatomer alpha subunit Cop1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0031410","GO:0005794","GO:0038024","GO:0016192","GO:0005198"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005198":null,"GO:0005737":null,"GO:0005794":null,"GO:0006886":null,"GO:0006888":null,"GO:0006890":null,"GO:0006891":null,"GO:0030126":null,"GO:0038024":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04569.1"],"transcripts_by_uniquename":{"SJAG_04569.1":null},"uniprot_identifier":"B6K763","uniquename":"SJAG_04569"}


id: SJAG_04570
data:
  {"cv_annotations":{"biological_process":[{"annotations":[109918],"is_not":false,"summary":null,"term":"GO:0042758"}],"cellular_component":[{"annotations":[109916],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[109917],"is_not":false,"summary":null,"term":"GO:0016020"}]},"dbxrefs":["GOA:B6K764","EnsemblGenomes-Gn:SJAG_04570","InterPro:IPR006838","EnsemblGenomes-Tr:EEB09368","UniProtKB/TrEMBL:B6K764"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"meu6","uniquename":"SJAG_04575"},{"name":"clr4","uniquename":"SJAG_04574"},{"name":"ubc4","uniquename":"SJAG_04573"},{"name":"rpn3","uniquename":"SJAG_04572"},{"name":"gpt1","uniquename":"SJAG_04571"},{"name":"aig1","uniquename":"SJAG_04570"},{"name":"cop1","uniquename":"SJAG_04569"},{"name":"dps1","uniquename":"SJAG_04568"},{"uniquename":"SJAG_04567"},{"name":"knk1","uniquename":"SJAG_04566"},{"name":"apl2","uniquename":"SJAG_04565"}],"genes_by_uniquename":{"HGNC:21214":null,"HGNC:21607":null,"SJAG_04570":null,"SPBPJ4664.05":null,"YHR140W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF04750","interpro_id":"IPR006838","interpro_name":"ADTRP/AIG1","interpro_type":"Family","locations":[{"end":223,"score":2.400000096203362e-25,"start":25}],"model":"PF04750","name":"FAR-17a/AIG1-like protein"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR10989","interpro_id":"IPR006838","interpro_name":"ADTRP/AIG1","interpro_type":"Family","locations":[{"end":232,"score":1.6000000747217632e-33,"start":26}],"model":"PTHR10989:SF16","name":"ANDROGEN-INDUCED PROTEIN 1-RELATED"}],"location":{"chromosome_name":"supercont5.3","end_pos":605704,"start_pos":604939,"strand":"reverse"},"low_complexity_region_coords":[[65,71]],"name":"aig1","ortholog_annotations":[{"gene_uniquename":"SJAG_04570","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:21214","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04570","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:21607","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04570","ortholog_taxonid":4896,"ortholog_uniquename":"SPBPJ4664.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04570","ortholog_taxonid":4932,"ortholog_uniquename":"YHR140W","reference_uniquename":"PMID:29761456"}],"product":"endomembrane system protein, FAR-17a/AIG1-like family protein, Aig1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005783","GO:0006629"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005783":null,"GO:0016020":null,"GO:0042758":null},"tm_domain_coords":[[21,43],[58,80],[93,115],[130,152],[159,178],[202,219]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04570.1"],"transcripts_by_uniquename":{"SJAG_04570.1":null},"uniprot_identifier":"B6K764","uniquename":"SJAG_04570"}


id: SJAG_04571
data:
  {"cv_annotations":{"biological_process":[{"annotations":[109920],"is_not":false,"summary":null,"term":"GO:0036503"},{"annotations":[109921],"is_not":false,"summary":null,"term":"GO:0006491"},{"annotations":[109922],"is_not":false,"summary":null,"term":"GO:0006486"},{"annotations":[109923],"is_not":false,"summary":null,"term":"GO:0018279"}],"cellular_component":[{"annotations":[109919],"is_not":false,"summary":null,"term":"GO:0005788"}],"molecular_function":[{"annotations":[109924],"is_not":false,"summary":null,"term":"GO:0005509"},{"annotations":[109925],"is_not":false,"summary":null,"term":"GO:0005537"},{"annotations":[109926],"is_not":false,"summary":null,"term":"GO:0003980"},{"annotations":[78197],"is_not":false,"summary":null,"term":"GO:0051082"}]},"dbxrefs":["GOA:B6K765","InterPro:IPR040497","InterPro:IPR040693","EnsemblGenomes-Tr:EEB09369","EnsemblGenomes-Gn:SJAG_04571","InterPro:IPR029044","InterPro:IPR040694","InterPro:IPR009448","InterPro:IPR040692","UniProtKB/TrEMBL:B6K765"],"deletion_viability":"unknown","disordered_region_coords":[[238,241],[1011,1012],[1015,1026],[1067,1069],[1101,1104],[1439,1444],[1403,1402],[1412,1418]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rxt2","uniquename":"SJAG_04576"},{"name":"meu6","uniquename":"SJAG_04575"},{"name":"clr4","uniquename":"SJAG_04574"},{"name":"ubc4","uniquename":"SJAG_04573"},{"name":"rpn3","uniquename":"SJAG_04572"},{"name":"gpt1","uniquename":"SJAG_04571"},{"name":"aig1","uniquename":"SJAG_04570"},{"name":"cop1","uniquename":"SJAG_04569"},{"name":"dps1","uniquename":"SJAG_04568"},{"uniquename":"SJAG_04567"},{"name":"knk1","uniquename":"SJAG_04566"}],"genes_by_uniquename":{"HGNC:15663":null,"HGNC:15664":null,"SJAG_04571":null,"SPBPJ4664.06":null,"YOR336W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.90.550.10","interpro_id":"IPR029044","interpro_name":"Nucleotide-diphospho-sugar transferases","interpro_type":"Homologous_superfamily","locations":[{"end":1389,"score":6.499999830030386e-37,"start":1136}],"model":"1g9rA00","name":"Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF06427","interpro_id":"IPR009448","interpro_name":"UDP-glucose:Glycoprotein Glucosyltransferase","interpro_type":"Family","locations":[{"end":1108,"score":2.0999999917333043e-25,"start":1006}],"model":"PF06427","name":"UDP-glucose:Glycoprotein Glucosyltransferase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF18400","interpro_id":"IPR040693","interpro_name":"UGGT, thioredoxin-like domain 1","interpro_type":"Domain","locations":[{"end":206,"score":1.5000000583807998e-16,"start":34}],"model":"PF18400","name":"Thioredoxin-like domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF18401","interpro_id":"IPR040694","interpro_name":"UGGT, thioredoxin-like domain 2","interpro_type":"Domain","locations":[{"end":385,"score":8.100000045375253e-34,"start":258}],"model":"PF18401","name":"Thioredoxin-like domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF18402","interpro_id":"IPR040692","interpro_name":"UGGT, thioredoxin-like domain 3","interpro_type":"Domain","locations":[{"end":636,"score":0.0,"start":393}],"model":"PF18402","name":"Thioredoxin-like domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF18403","interpro_id":"IPR040525","interpro_name":"UDP-glucose:glycoprotein glucosyltransferase, thioredoxin-like domain 4","interpro_type":"Domain","locations":[{"end":815,"score":1.999999987845058e-8,"start":669}],"model":"PF18403","name":"Thioredoxin-like domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF18404","interpro_id":"IPR040497","interpro_name":"Glucosyltransferase 24, catalytic domain","interpro_type":"Domain","locations":[{"end":1401,"score":0.0,"start":1135}],"model":"PF18404","name":"Glucosyltransferase 24"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11226","interpro_id":"IPR009448","interpro_name":"UDP-glucose:Glycoprotein Glucosyltransferase","interpro_type":"Family","locations":[{"end":1427,"score":0.0,"start":5}],"model":"PTHR11226:SF0","name":"UDP-GLUCOSE GLYCOPROTEIN:GLUCOSYLTRANSFERASE"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF53448","interpro_id":"IPR029044","interpro_name":"Nucleotide-diphospho-sugar transferases","interpro_type":"Homologous_superfamily","locations":[{"end":1401,"score":0.0,"start":1135}],"model":"0038020","name":"Nucleotide-diphospho-sugar transferases"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd06432","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":1382,"score":0.0,"start":1135}],"model":"cd06432","name":"The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family"}],"location":{"chromosome_name":"supercont5.3","end_pos":604471,"start_pos":600137,"strand":"reverse"},"low_complexity_region_coords":[[5,18],[91,102],[614,629],[1403,1411],[1419,1438]],"name":"gpt1","ortholog_annotations":[{"gene_uniquename":"SJAG_04571","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:15663","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04571","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:15664","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04571","ortholog_taxonid":4896,"ortholog_uniquename":"SPBPJ4664.06","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04571","ortholog_taxonid":4932,"ortholog_uniquename":"YOR336W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04571","ortholog_taxonid":4932,"ortholog_uniquename":"YOR336W","reference_uniquename":"PMID:26896847"}],"product":"UDP-glucose-glycoprotein glucosyltransferase Gpt1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0051082","GO:0006486","GO:0030163","GO:0016757","GO:0005783"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003980":null,"GO:0005509":null,"GO:0005537":null,"GO:0005788":null,"GO:0006486":null,"GO:0006491":null,"GO:0018279":null,"GO:0036503":null,"GO:0051082":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04571.1"],"transcripts_by_uniquename":{"SJAG_04571.1":null},"uniprot_identifier":"B6K765","uniquename":"SJAG_04571"}


id: SJAG_04572
data:
  {"coiled_coil_coords":[[445,475]],"cv_annotations":{"biological_process":[{"annotations":[98198],"is_not":false,"summary":null,"term":"GO:0043161"}],"cellular_component":[{"annotations":[98196],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[98197],"is_not":false,"summary":null,"term":"GO:0008541"}]},"dbxrefs":["GOA:B6K766","InterPro:IPR035267","EnsemblGenomes-Tr:EEB09370","InterPro:IPR013586","EnsemblGenomes-Gn:SJAG_04572","UniProtKB/TrEMBL:B6K766","InterPro:IPR036390","InterPro:IPR000717"],"deletion_viability":"unknown","disordered_region_coords":[[1,7],[85,100],[410,410],[454,459],[478,480]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"arg12","uniquename":"SJAG_04577"},{"name":"rxt2","uniquename":"SJAG_04576"},{"name":"meu6","uniquename":"SJAG_04575"},{"name":"clr4","uniquename":"SJAG_04574"},{"name":"ubc4","uniquename":"SJAG_04573"},{"name":"rpn3","uniquename":"SJAG_04572"},{"name":"gpt1","uniquename":"SJAG_04571"},{"name":"aig1","uniquename":"SJAG_04570"},{"name":"cop1","uniquename":"SJAG_04569"},{"name":"dps1","uniquename":"SJAG_04568"},{"uniquename":"SJAG_04567"}],"genes_by_uniquename":{"HGNC:9560":null,"SJAG_04572":null,"SPBC119.01":null,"YER021W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.25.40.570","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":409,"score":2.4000000848900527e-6,"start":239}],"model":"3txnA00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01399","interpro_id":"IPR000717","interpro_name":"Proteasome component (PCI) domain","interpro_type":"Domain","locations":[{"end":407,"score":3.79999990525838e-17,"start":306}],"model":"PF01399","name":"PCI domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08375","interpro_id":"IPR013586","interpro_name":"26S proteasome regulatory subunit, C-terminal","interpro_type":"Domain","locations":[{"end":475,"score":8.699999824884242e-23,"start":412}],"model":"PF08375","name":"Proteasome regulatory subunit C-terminal"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50250","interpro_id":"IPR000717","interpro_name":"Proteasome component (PCI) domain","interpro_type":"Domain","locations":[{"end":412,"score":0.0,"start":232}],"model":"PS50250","name":"PCI domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR10758","interpro_id":"IPR050756","interpro_name":"COP9 signalosome complex subunit 3","interpro_type":"Family","locations":[{"end":468,"score":0.0,"start":4}],"model":"PTHR10758:SF2","name":"26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00088","interpro_id":"IPR000717","interpro_name":"Proteasome component (PCI) domain","interpro_type":"Domain","locations":[{"end":430,"score":1.099999972191823e-25,"start":340}],"model":"SM00088","name":"motif in proteasome subunits, Int-6, Nip-1 and TRIP-15"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00753","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":340,"score":0.0,"start":167}],"model":"SM00753","name":"PCI/PINT associated module"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF46785","interpro_id":"IPR036390","interpro_name":"Winged helix DNA-binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":411,"score":2.499999936844688e-6,"start":340}],"model":"0049886","name":"\"Winged helix\" DNA-binding domain"}],"location":{"chromosome_name":"supercont5.3","end_pos":599333,"start_pos":597831,"strand":"reverse"},"low_complexity_region_coords":[[164,175],[463,477]],"name":"rpn3","ortholog_annotations":[{"gene_uniquename":"SJAG_04572","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9560","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04572","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC119.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04572","ortholog_taxonid":4932,"ortholog_uniquename":"YER021W","reference_uniquename":"PMID:29761456"}],"product":"19S proteasome regulatory subunit Rpn3","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0030163"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0008541":null,"GO:0043161":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04572.1"],"transcripts_by_uniquename":{"SJAG_04572.1":null},"uniprot_identifier":"B6K766","uniquename":"SJAG_04572"}


id: SJAG_04573
data:
  {"cv_annotations":{"biological_process":[{"annotations":[98202],"is_not":false,"summary":null,"term":"GO:0045842"},{"annotations":[98203],"is_not":false,"summary":null,"term":"GO:0031146"},{"annotations":[98204],"is_not":false,"summary":null,"term":"GO:0032933"},{"annotations":[98205],"is_not":false,"summary":null,"term":"GO:0006511"}],"cellular_component":[{"annotations":[98199],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[98200],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[98201],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[72429],"is_not":false,"summary":null,"term":"GO:0000151"}],"molecular_function":[{"annotations":[98206],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[98207],"is_not":false,"summary":null,"term":"GO:0061631"},{"annotations":[72427],"is_not":false,"summary":null,"term":"GO:0031625"}]},"dbxrefs":["GOA:B6K767","UniProtKB/TrEMBL:B6K767","EnsemblGenomes-Tr:EEB09371","EnsemblGenomes-Gn:SJAG_04573","InterPro:IPR000608","InterPro:IPR023313","InterPro:IPR016135"],"deletion_viability":"unknown","disordered_region_coords":[[17,18]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"apq12","uniquename":"SJAG_04578"},{"name":"arg12","uniquename":"SJAG_04577"},{"name":"rxt2","uniquename":"SJAG_04576"},{"name":"meu6","uniquename":"SJAG_04575"},{"name":"clr4","uniquename":"SJAG_04574"},{"name":"ubc4","uniquename":"SJAG_04573"},{"name":"rpn3","uniquename":"SJAG_04572"},{"name":"gpt1","uniquename":"SJAG_04571"},{"name":"aig1","uniquename":"SJAG_04570"},{"name":"cop1","uniquename":"SJAG_04569"},{"name":"dps1","uniquename":"SJAG_04568"}],"genes_by_uniquename":{"HGNC:12474":null,"HGNC:12475":null,"HGNC:12476":null,"HGNC:21647":null,"SJAG_04573":null,"SPBC119.02":null,"YBR082C":null,"YDR059C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.10.110.10","interpro_id":"IPR016135","interpro_name":"Ubiquitin-conjugating enzyme/RWD-like","interpro_type":"Homologous_superfamily","locations":[{"end":147,"score":0.0,"start":1}],"model":"4onlB00","name":"Ubiquitin Conjugating Enzyme"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00179","interpro_id":"IPR000608","interpro_name":"Ubiquitin-conjugating enzyme E2","interpro_type":"Domain","locations":[{"end":141,"score":0.0,"start":5}],"model":"PF00179","name":"Ubiquitin-conjugating enzyme"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00183","interpro_id":"IPR023313","interpro_name":"Ubiquitin-conjugating enzyme, active site","interpro_type":"Active_site","locations":[{"end":89,"score":0.0,"start":74}],"model":"PS00183","name":"Ubiquitin-conjugating (UBC) active site signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50127","interpro_id":"IPR000608","interpro_name":"Ubiquitin-conjugating enzyme E2","interpro_type":"Domain","locations":[{"end":147,"score":0.0,"start":1}],"model":"PS50127","name":"Ubiquitin-conjugating (UBC) core domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR24068","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":132,"score":0.0,"start":8}],"model":"PTHR24068:SF74","name":"UBIQUITIN-CONJUGATING ENZYME E2"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00212","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":147,"score":0.0,"start":4}],"model":"SM00212","name":"Ubiquitin-conjugating enzyme E2, catalytic domain homologues"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF54495","interpro_id":"IPR016135","interpro_name":"Ubiquitin-conjugating enzyme/RWD-like","interpro_type":"Homologous_superfamily","locations":[{"end":146,"score":0.0,"start":1}],"model":"0054300","name":"UBC-like"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00195","interpro_id":"IPR000608","interpro_name":"Ubiquitin-conjugating enzyme E2","interpro_type":"Domain","locations":[{"end":142,"score":0.0,"start":4}],"model":"cd00195","name":""}],"location":{"chromosome_name":"supercont5.3","end_pos":597310,"start_pos":596867,"strand":"reverse"},"name":"ubc4","ortholog_annotations":[{"gene_uniquename":"SJAG_04573","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12474","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04573","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12475","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04573","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12476","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04573","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:21647","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04573","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC119.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04573","ortholog_taxonid":4932,"ortholog_uniquename":"YBR082C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04573","ortholog_taxonid":4932,"ortholog_uniquename":"YDR059C","reference_uniquename":"PMID:29761456"}],"product":"ubiquitin conjugating enzyme E2 for APC and SCF Ubc4/UbcP1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0140096","GO:0016746","GO:0023052","GO:0005829","GO:0005634","GO:0030163","GO:0044772","GO:0019787"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000151":null,"GO:0005524":null,"GO:0005634":null,"GO:0005737":null,"GO:0005829":null,"GO:0006511":null,"GO:0031146":null,"GO:0031625":null,"GO:0032933":null,"GO:0045842":null,"GO:0061631":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04573.1"],"transcripts_by_uniquename":{"SJAG_04573.1":null},"uniprot_identifier":"B6K767","uniquename":"SJAG_04573"}


id: SJAG_04574
data:
  {"alleles_by_uniquename":{"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_04574:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04574","name":"clr4delta","uniquename":"SJAG_04574:allele-1"}},"cv_annotations":{"biological_process":[{"annotations":[106623],"is_not":false,"summary":null,"term":"GO:0033562"},{"annotations":[106624],"is_not":false,"summary":null,"term":"GO:0071040"},{"annotations":[106625],"is_not":false,"summary":null,"term":"GO:0031508"},{"annotations":[106626],"is_not":false,"summary":null,"term":"GO:0030466"},{"annotations":[106627],"is_not":false,"summary":null,"term":"GO:1902794"},{"annotations":[106628],"is_not":false,"summary":null,"term":"GO:0140727"},{"annotations":[106629],"is_not":false,"summary":null,"term":"GO:0031509"}],"cellular_component":[{"annotations":[106618],"is_not":false,"summary":null,"term":"GO:0043494"},{"annotations":[106619],"is_not":false,"summary":null,"term":"GO:0031934"},{"annotations":[106620],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[106621],"is_not":false,"summary":null,"term":"GO:0005721"},{"annotations":[106622],"is_not":false,"summary":null,"term":"GO:0140720"}],"molecular_function":[{"annotations":[106630],"is_not":false,"summary":null,"term":"GO:0003690"},{"annotations":[106631,106632],"is_not":false,"summary":null,"term":"GO:0046974"},{"annotations":[106633],"is_not":false,"summary":null,"term":"GO:0140948"},{"annotations":[106634],"is_not":false,"summary":null,"term":"GO:0140949"},{"annotations":[106635],"is_not":false,"summary":null,"term":"GO:0140947"},{"annotations":[106636],"is_not":false,"summary":null,"term":"GO:0140566"},{"annotations":[106637],"is_not":false,"summary":null,"term":"GO:0008168"},{"annotations":[106638],"is_not":false,"summary":null,"term":"GO:0016279"},{"annotations":[106639],"is_not":false,"summary":null,"term":"GO:0003697"},{"annotations":[106640],"is_not":false,"summary":null,"term":"GO:0003727"},{"annotations":[106641],"is_not":false,"summary":null,"term":"GO:0008270"}],"multi_locus_phenotype":[{"annotations":[115561],"is_not":false,"summary":null,"term":"FYPO:0002061"}],"single_locus_phenotype":[{"annotations":[115560],"is_not":false,"summary":null,"term":"FYPO:0002061"}]},"dbxrefs":["InterPro:IPR007728","InterPro:IPR023780","UniProtKB/TrEMBL:B6K768","EnsemblGenomes-Tr:EEB09372","InterPro:IPR000953","EnsemblGenomes-Gn:SJAG_04574","GOA:B6K768","InterPro:IPR003616","InterPro:IPR001214","InterPro:IPR011381","InterPro:IPR016197","InterPro:IPR023779"],"deletion_viability":"inviable","disordered_region_coords":[[3,12],[20,25],[53,54],[63,69],[133,161],[163,202],[210,216],[223,225],[228,229],[317,318],[487,493],[72,89],[102,121]],"feature_publications":[{"reference_uniquename":"PMID:35226668","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_04579"},{"name":"apq12","uniquename":"SJAG_04578"},{"name":"arg12","uniquename":"SJAG_04577"},{"name":"rxt2","uniquename":"SJAG_04576"},{"name":"meu6","uniquename":"SJAG_04575"},{"name":"clr4","uniquename":"SJAG_04574"},{"name":"ubc4","uniquename":"SJAG_04573"},{"name":"rpn3","uniquename":"SJAG_04572"},{"name":"gpt1","uniquename":"SJAG_04571"},{"name":"aig1","uniquename":"SJAG_04570"},{"name":"cop1","uniquename":"SJAG_04569"}],"genes_by_uniquename":{"HGNC:11479":null,"HGNC:17287":null,"SJAG_03118":null,"SJAG_04574":null,"SPBC428.08c":null},"genotypes_by_uniquename":{"clr4delta":{"display_name":"clr4delta","display_uniquename":"clr4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04574:allele-1","expression":"Null"}]}]},"clr4delta__leo1delta":{"display_name":"clr4delta leo1delta","display_uniquename":"clr4delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04574:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.170.270.10","interpro_id":"IPR046341","interpro_name":"SET domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":482,"score":0.0,"start":221}],"model":"1mvhA00","name":"SET domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.40.50.40","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":75,"score":1.8999999397044928e-20,"start":13}],"model":"1g6zA00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00385","interpro_id":"IPR023780","interpro_name":"Chromo domain","interpro_type":"Domain","locations":[{"end":71,"score":2.099999951710174e-9,"start":19}],"model":"PF00385","name":"Chromo (CHRromatin Organisation MOdifier) domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00856","interpro_id":"IPR001214","interpro_name":"SET domain","interpro_type":"Domain","locations":[{"end":478,"score":8.199999739777285e-20,"start":366}],"model":"PF00856","name":"SET domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF05033","interpro_id":"IPR007728","interpro_name":"Pre-SET domain","interpro_type":"Domain","locations":[{"end":347,"score":2.4000000272348307e-17,"start":246}],"model":"PF05033","name":"Pre-SET motif"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF009343","interpro_id":"IPR011381","interpro_name":"Histone-lysine N-methyltransferase SUV39H1/2-like","interpro_type":"Family","locations":[{"end":517,"score":0.0,"start":3}],"model":"PIRSF009343","name":"Histone H3-K9 methyltransferase"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00598","interpro_id":"IPR023779","interpro_name":"Chromo domain, conserved site","interpro_type":"Conserved_site","locations":[{"end":58,"score":0.0,"start":38}],"model":"PS00598","name":"Chromo domain signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50013","interpro_id":"IPR000953","interpro_name":"Chromo/chromo shadow domain","interpro_type":"Domain","locations":[{"end":72,"score":0.0,"start":19}],"model":"PS50013","name":"Chromo and chromo shadow domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50280","interpro_id":"IPR001214","interpro_name":"SET domain","interpro_type":"Domain","locations":[{"end":479,"score":0.0,"start":355}],"model":"PS50280","name":"SET domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50867","interpro_id":"IPR007728","interpro_name":"Pre-SET domain","interpro_type":"Domain","locations":[{"end":352,"score":0.0,"start":286}],"model":"PS50867","name":"Pre-SET domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50868","interpro_id":"IPR003616","interpro_name":"Post-SET domain","interpro_type":"Domain","locations":[{"end":517,"score":0.0,"start":501}],"model":"PS50868","name":"Post-SET domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR46223","interpro_id":"IPR050973","interpro_name":"Histone-lysine N-methyltransferase, H3 Lys-9 specific","interpro_type":"Family","locations":[{"end":517,"score":0.0,"start":3}],"model":"PTHR46223:SF3","name":"HISTONE-LYSINE N-METHYLTRANSFERASE SUV39H"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00298","interpro_id":"IPR000953","interpro_name":"Chromo/chromo shadow domain","interpro_type":"Domain","locations":[{"end":73,"score":1.300000011068489e-13,"start":18}],"model":"SM00298","name":"Chromatin organization modifier domain"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00317","interpro_id":"IPR001214","interpro_name":"SET domain","interpro_type":"Domain","locations":[{"end":485,"score":4.199999989514762e-35,"start":355}],"model":"SM00317","name":"SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00468","interpro_id":"IPR007728","interpro_name":"Pre-SET domain","interpro_type":"Domain","locations":[{"end":339,"score":6.000000117248888e-25,"start":237}],"model":"SM00468","name":"N-terminal to some SET domains"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00508","interpro_id":"IPR003616","interpro_name":"Post-SET domain","interpro_type":"Domain","locations":[{"end":517,"score":0.0004400000034365803,"start":501}],"model":"SM00508","name":"Cysteine-rich motif following a subset of SET domains"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF54160","interpro_id":"IPR016197","interpro_name":"Chromo-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":75,"score":1.4599999200634505e-17,"start":13}],"model":"0046932","name":"Chromo domain-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF82199","interpro_id":"IPR046341","interpro_name":"SET domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":480,"score":0.0,"start":228}],"model":"0048228","name":"SET domain"}],"location":{"chromosome_name":"supercont5.3","end_pos":593494,"start_pos":591711,"strand":"reverse"},"low_complexity_region_coords":[[16,18],[90,101],[122,132]],"name":"clr4","ortholog_annotations":[{"gene_uniquename":"SJAG_04574","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11479","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04574","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17287","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04574","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC428.08c","reference_uniquename":"PMID:21511999"}],"product":"histone lysine H3-K9 methyltransferase (Suv39) Clr4","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null,"PMID:35226668":null},"subset_termids":["GO:0006325","GO:0005654","GO:0032200","GO:0008276","FYPO:0002059","GO:0005634","GO:0060090","GO:0140096","GO:0016741","GO:0005694"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0002061":null,"GO:0003690":null,"GO:0003697":null,"GO:0003727":null,"GO:0005634":null,"GO:0005721":null,"GO:0008168":null,"GO:0008270":null,"GO:0016279":null,"GO:0030466":null,"GO:0031508":null,"GO:0031509":null,"GO:0031934":null,"GO:0033562":null,"GO:0043494":null,"GO:0046974":null,"GO:0071040":null,"GO:0140566":null,"GO:0140720":null,"GO:0140727":null,"GO:0140947":null,"GO:0140948":null,"GO:0140949":null,"GO:1902794":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04574.1"],"transcripts_by_uniquename":{"SJAG_04574.1":null},"uniprot_identifier":"B6K768","uniquename":"SJAG_04574"}


id: SJAG_04575
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[106615],"is_not":false,"summary":null,"term":"GO:0005730"},{"annotations":[106616],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[106617],"is_not":false,"summary":null,"term":"GO:0008289"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB09373","InterPro:IPR011993","InterPro:IPR039483","UniProtKB/TrEMBL:B6K769","InterPro:IPR001849","InterPro:IPR039712","EnsemblGenomes-Gn:SJAG_04575"],"deletion_viability":"unknown","disordered_region_coords":[[3,6],[17,18],[44,55],[57,59],[123,150],[296,301],[637,669],[23,30],[320,359],[377,405],[423,422],[432,439],[452,463],[476,489],[513,520],[534,580],[603,620]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"isp7","uniquename":"SJAG_04580"},{"uniquename":"SJAG_04579"},{"name":"apq12","uniquename":"SJAG_04578"},{"name":"arg12","uniquename":"SJAG_04577"},{"name":"rxt2","uniquename":"SJAG_04576"},{"name":"meu6","uniquename":"SJAG_04575"},{"name":"clr4","uniquename":"SJAG_04574"},{"name":"ubc4","uniquename":"SJAG_04573"},{"name":"rpn3","uniquename":"SJAG_04572"},{"name":"gpt1","uniquename":"SJAG_04571"},{"name":"aig1","uniquename":"SJAG_04570"}],"genes_by_uniquename":{"SJAG_04575":null,"SPBC428.07":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.30.29.30","interpro_id":"IPR011993","interpro_name":"PH-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":242,"score":2.4000000848900527e-6,"start":164}],"model":"2d9xA01","name":"Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF15406","interpro_id":"IPR039483","interpro_name":"Meiotic expression up-regulated protein 6, PH domain","interpro_type":"Domain","locations":[{"end":234,"score":8.89999972729603e-29,"start":110}],"model":"PF15406","name":"Pleckstrin homology domain"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50003","interpro_id":"IPR001849","interpro_name":"Pleckstrin homology domain","interpro_type":"Domain","locations":[{"end":237,"score":0.0,"start":74}],"model":"PS50003","name":"PH domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR42073","interpro_id":"IPR039712","interpro_name":"Meiotic expression up-regulated protein 6","interpro_type":"Family","locations":[{"end":661,"score":0.0,"start":1}],"model":"PTHR42073:SF1","name":"MEIOTIC EXPRESSION UP-REGULATED PROTEIN 6"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00233","interpro_id":"IPR001849","interpro_name":"Pleckstrin homology domain","interpro_type":"Domain","locations":[{"end":239,"score":0.000019999999494757503,"start":115}],"model":"SM00233","name":"Pleckstrin homology domain."},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF50729","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":249,"score":3.41000006010006e-10,"start":170}],"model":"0050517","name":"PH domain-like"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00821","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":230,"score":3.069899889851513e-7,"start":168}],"model":"cd00821","name":"Pleckstrin homology (PH) domain"}],"location":{"chromosome_name":"supercont5.3","end_pos":591339,"start_pos":589231,"strand":"forward"},"low_complexity_region_coords":[[31,43],[138,152],[278,295],[360,376],[406,422],[423,431],[440,451],[464,475],[490,512],[521,533],[581,602],[621,636]],"name":"meu6","ortholog_annotations":[{"gene_uniquename":"SJAG_04575","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC428.07","reference_uniquename":"PMID:21511999"}],"product":"pleckstrin homology domain protein Meu6","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"subset_termids":["GO:0008289","GO:0005634","GO:0005730"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005730":null,"GO:0008289":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04575.1"],"transcripts_by_uniquename":{"SJAG_04575.1":null},"uniprot_identifier":"B6K769","uniquename":"SJAG_04575"}


id: SJAG_04576
data:
  {"coiled_coil_coords":[[1,21]],"cv_annotations":{"biological_process":[{"annotations":[106613],"is_not":false,"summary":null,"term":"GO:0006357"},{"annotations":[106614],"is_not":false,"summary":null,"term":"GO:0045815"}],"cellular_component":[{"annotations":[106610],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[106611],"is_not":false,"summary":null,"term":"GO:0033698"},{"annotations":[106612],"is_not":false,"summary":null,"term":"GO:0070210"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_04576","EnsemblGenomes-Tr:EEB09374","GOA:B6K770","InterPro:IPR013904","InterPro:IPR039602","UniProtKB/TrEMBL:B6K770"],"deletion_viability":"unknown","disordered_region_coords":[[25,32],[163,168],[217,238]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mal2","uniquename":"SJAG_04581"},{"name":"isp7","uniquename":"SJAG_04580"},{"uniquename":"SJAG_04579"},{"name":"apq12","uniquename":"SJAG_04578"},{"name":"arg12","uniquename":"SJAG_04577"},{"name":"rxt2","uniquename":"SJAG_04576"},{"name":"meu6","uniquename":"SJAG_04575"},{"name":"clr4","uniquename":"SJAG_04574"},{"name":"ubc4","uniquename":"SJAG_04573"},{"name":"rpn3","uniquename":"SJAG_04572"},{"name":"gpt1","uniquename":"SJAG_04571"}],"genes_by_uniquename":{"SJAG_04576":null,"SPBC428.06c":null,"YBR095C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08595","interpro_id":"IPR013904","interpro_name":"Transcriptional regulatory protein RXT2, N-terminal","interpro_type":"Domain","locations":[{"end":156,"score":4.300000078227839e-10,"start":33}],"model":"PF08595","name":"RXT2-like, N-terminal"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR28232","interpro_id":"IPR039602","interpro_name":"Transcriptional regulatory protein Rxt2","interpro_type":"Family","locations":[{"end":226,"score":0.0,"start":158}],"model":"PTHR28232:SF1","name":"TRANSCRIPTIONAL REGULATORY PROTEIN RXT2"}],"location":{"chromosome_name":"supercont5.3","end_pos":588834,"start_pos":587877,"strand":"reverse"},"name":"rxt2","ortholog_annotations":[{"gene_uniquename":"SJAG_04576","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC428.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04576","ortholog_taxonid":4932,"ortholog_uniquename":"YBR095C","reference_uniquename":"PMID:29761456"}],"product":"Clr6 and Rpd3L histone deacetylase complex subunit Rxt2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0006355","GO:0005654","GO:0005694","GO:0006351","GO:0005634","GO:0006325"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0006357":null,"GO:0033698":null,"GO:0045815":null,"GO:0070210":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04576.1"],"transcripts_by_uniquename":{"SJAG_04576.1":null},"uniprot_identifier":"B6K770","uniquename":"SJAG_04576"}


id: SJAG_04577
data:
  {"cv_annotations":{"biological_process":[{"annotations":[106604],"is_not":false,"summary":null,"term":"GO:0042450"},{"annotations":[106605],"is_not":false,"summary":null,"term":"GO:0000053"},{"annotations":[106606],"is_not":false,"summary":null,"term":"GO:0006526"},{"annotations":[106607],"is_not":false,"summary":null,"term":"GO:0000050"}],"cellular_component":[{"annotations":[106603],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[106608],"is_not":false,"summary":null,"term":"GO:0004055"},{"annotations":[106609],"is_not":false,"summary":null,"term":"GO:0005524"}]},"dbxrefs":["InterPro:IPR014729","GOA:B6K771","InterPro:IPR001518","EnsemblGenomes-Tr:EEB09375","InterPro:IPR024074","EnsemblGenomes-Gn:SJAG_04577","InterPro:IPR018223","UniProtKB/TrEMBL:B6K771","InterPro:IPR023434"],"deletion_viability":"unknown","disordered_region_coords":[[208,213]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tyw3","uniquename":"SJAG_05334"},{"name":"mal2","uniquename":"SJAG_04581"},{"name":"isp7","uniquename":"SJAG_04580"},{"uniquename":"SJAG_04579"},{"name":"apq12","uniquename":"SJAG_04578"},{"name":"arg12","uniquename":"SJAG_04577"},{"name":"rxt2","uniquename":"SJAG_04576"},{"name":"meu6","uniquename":"SJAG_04575"},{"name":"clr4","uniquename":"SJAG_04574"},{"name":"ubc4","uniquename":"SJAG_04573"},{"name":"rpn3","uniquename":"SJAG_04572"}],"genes_by_uniquename":{"HGNC:758":null,"SJAG_04577":null,"SPBC428.05c":null,"YOL058W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.620","interpro_id":"IPR014729","interpro_name":"Rossmann-like alpha/beta/alpha sandwich fold","interpro_type":"Homologous_superfamily","locations":[{"end":181,"score":0.0,"start":1}],"model":"1vl2A01","name":"HUPs"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.90.1260.10","interpro_id":"IPR024074","interpro_name":"Argininosuccinate synthetase, catalytic/multimerisation domain body","interpro_type":"Homologous_superfamily","locations":[{"end":410,"score":0.0,"start":182}],"model":"1vl2D02","name":"Argininosuccinate synthetase, chain A, domain 2"},{"dbname":"HAMAP","evidence":"PrfScan","id":"MF_00005","interpro_id":"IPR023434","interpro_name":"Argininosuccinate synthase, type 1 subfamily","interpro_type":"Family","locations":[{"end":409,"score":0.0,"start":6}],"model":"MF_00005","name":"Argininosuccinate synthase [argG]"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00764","interpro_id":"IPR048267","interpro_name":"Arginosuccinate synthase-like, N-terminal domain","interpro_type":"Domain","locations":[{"end":172,"score":0.0,"start":9}],"model":"PF00764","name":"Arginosuccinate synthase N-terminal HUP domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF20979","interpro_id":"IPR048268","interpro_name":"Arginosuccinate synthase C-terminal domain","interpro_type":"Domain","locations":[{"end":402,"score":0.0,"start":181}],"model":"PF20979","name":"Arginosuccinate synthase C-terminal domain"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00564","interpro_id":"IPR018223","interpro_name":"Argininosuccinate synthase, conserved site","interpro_type":"Conserved_site","locations":[{"end":20,"score":0.0,"start":12}],"model":"PS00564","name":"Argininosuccinate synthase signature 1"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00565","interpro_id":"IPR018223","interpro_name":"Argininosuccinate synthase, conserved site","interpro_type":"Conserved_site","locations":[{"end":130,"score":0.0,"start":119}],"model":"PS00565","name":"Argininosuccinate synthase signature 2"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11587","interpro_id":"IPR001518","interpro_name":"Argininosuccinate synthase","interpro_type":"Family","locations":[{"end":406,"score":0.0,"start":1}],"model":"PTHR11587:SF2","name":"ARGININOSUCCINATE SYNTHASE"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52402","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":177,"score":0.0,"start":7}],"model":"0039977","name":"Adenine nucleotide alpha hydrolases-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF69864","interpro_id":"IPR024074","interpro_name":"Argininosuccinate synthetase, catalytic/multimerisation domain body","interpro_type":"Homologous_superfamily","locations":[{"end":407,"score":0.0,"start":180}],"model":"0039978","name":"Argininosuccinate synthetase, C-terminal domain"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR00032","interpro_id":"IPR001518","interpro_name":"Argininosuccinate synthase","interpro_type":"Family","locations":[{"end":406,"score":0.0,"start":9}],"model":"TIGR00032","name":"argininosuccinate synthase"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd01999","interpro_id":"IPR023434","interpro_name":"Argininosuccinate synthase, type 1 subfamily","interpro_type":"Family","locations":[{"end":400,"score":0.0,"start":9}],"model":"cd01999","name":""}],"location":{"chromosome_name":"supercont5.3","end_pos":586975,"start_pos":585740,"strand":"reverse"},"low_complexity_region_coords":[[99,108]],"name":"arg12","ortholog_annotations":[{"gene_uniquename":"SJAG_04577","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:758","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04577","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC428.05c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04577","ortholog_taxonid":4932,"ortholog_uniquename":"YOL058W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04577","ortholog_taxonid":4932,"ortholog_uniquename":"YOL058W","reference_uniquename":"PMID:26896847"}],"product":"argininosuccinate synthase Arg12","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0071941","GO:0006520","GO:0005829","GO:0016874"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000050":null,"GO:0000053":null,"GO:0004055":null,"GO:0005524":null,"GO:0005829":null,"GO:0006526":null,"GO:0042450":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04577.1"],"transcripts_by_uniquename":{"SJAG_04577.1":null},"uniprot_identifier":"B6K771","uniquename":"SJAG_04577"}


id: SJAG_04578
data:
  {"cv_annotations":{"biological_process":[{"annotations":[106600],"is_not":false,"summary":null,"term":"GO:0006643"},{"annotations":[106601],"is_not":false,"summary":null,"term":"GO:0007077"},{"annotations":[106602],"is_not":false,"summary":null,"term":"GO:0006998"}],"cellular_component":[{"annotations":[106595],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[106596],"is_not":false,"summary":null,"term":"GO:0140599"},{"annotations":[106597],"is_not":false,"summary":null,"term":"GO:0005635"},{"annotations":[106598],"is_not":false,"summary":null,"term":"GO:0042175"},{"annotations":[106599],"is_not":false,"summary":null,"term":"GO:0097038"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_04578","InterPro:IPR024316","EnsemblGenomes-Tr:EEB09376","UniProtKB/TrEMBL:B6K772","GOA:B6K772"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pop100","uniquename":"SJAG_04582"},{"name":"tyw3","uniquename":"SJAG_05334"},{"name":"mal2","uniquename":"SJAG_04581"},{"name":"isp7","uniquename":"SJAG_04580"},{"uniquename":"SJAG_04579"},{"name":"apq12","uniquename":"SJAG_04578"},{"name":"arg12","uniquename":"SJAG_04577"},{"name":"rxt2","uniquename":"SJAG_04576"},{"name":"meu6","uniquename":"SJAG_04575"},{"name":"clr4","uniquename":"SJAG_04574"},{"name":"ubc4","uniquename":"SJAG_04573"}],"genes_by_uniquename":{"SJAG_04578":null,"SPBC428.04":null,"YIL040W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF12716","interpro_id":"IPR024316","interpro_name":"Nuclear pore assembly and biogenesis protein, APQ12","interpro_type":"Family","locations":[{"end":114,"score":5.200000032345997e-6,"start":62}],"model":"PF12716","name":"Nuclear pore assembly and biogenesis"}],"location":{"chromosome_name":"supercont5.3","end_pos":585467,"start_pos":585123,"strand":"forward"},"low_complexity_region_coords":[[100,113]],"name":"apq12","ortholog_annotations":[{"gene_uniquename":"SJAG_04578","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC428.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04578","ortholog_taxonid":4932,"ortholog_uniquename":"YIL040W","reference_uniquename":"PMID:29761456"}],"product":"nuclear membrane organization protein Apq12","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0061024","GO:0005634","GO:0006629","GO:0005783"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005635":null,"GO:0005783":null,"GO:0006643":null,"GO:0006998":null,"GO:0007077":null,"GO:0042175":null,"GO:0097038":null,"GO:0140599":null},"tm_domain_coords":[[59,81],[94,113]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04578.1"],"transcripts_by_uniquename":{"SJAG_04578.1":null},"uniprot_identifier":"B6K772","uniquename":"SJAG_04578"}


id: SJAG_04579
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[90725],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[90726],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[90727],"is_not":false,"summary":null,"term":"GO:0000287"},{"annotations":[90728],"is_not":false,"summary":null,"term":"GO:0016791"}]},"dbxrefs":["GOA:B6K773","InterPro:IPR000150","InterPro:IPR023214","InterPro:IPR036412","InterPro:IPR006379","EnsemblGenomes-Tr:EEB09377","UniProtKB/TrEMBL:B6K773","EnsemblGenomes-Gn:SJAG_04579"],"deletion_viability":"unknown","disordered_region_coords":[[4,5]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ypf1","uniquename":"SJAG_04583"},{"name":"pop100","uniquename":"SJAG_04582"},{"name":"tyw3","uniquename":"SJAG_05334"},{"name":"mal2","uniquename":"SJAG_04581"},{"name":"isp7","uniquename":"SJAG_04580"},{"uniquename":"SJAG_04579"},{"name":"apq12","uniquename":"SJAG_04578"},{"name":"arg12","uniquename":"SJAG_04577"},{"name":"rxt2","uniquename":"SJAG_04576"},{"name":"meu6","uniquename":"SJAG_04575"},{"name":"clr4","uniquename":"SJAG_04574"}],"genes_by_uniquename":{"SJAG_04579":null,"SPAC25B8.12c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.1240.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":213,"score":0.0,"start":99}],"model":"1nf2A02","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.1000","interpro_id":"IPR023214","interpro_name":"HAD superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":286,"score":0.0,"start":20}],"model":"1nf2A01","name":"HAD superfamily/HAD-like"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08282","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":286,"score":5.605193857299268e-45,"start":20}],"model":"PF08282","name":"haloacid dehalogenase-like hydrolase"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS01229","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":262,"score":0.0,"start":240}],"model":"PS01229","name":"Hypothetical cof family signature 2"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR10000","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":292,"score":0.0,"start":19}],"model":"PTHR10000:SF8","name":"PHOSPHOSERINE PHOSPHATASE"},{"dbname":"SFLD","evidence":"HMMPfam","id":"SFLDG01140","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":291,"score":2.500000538263333e-40,"start":19}],"model":"SFLDG01140","name":"C2.B: Phosphomannomutase and Phosphatase Like"},{"dbname":"SFLD","evidence":"HMMPfam","id":"SFLDS00003","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":291,"score":2.500000538263333e-40,"start":19}],"model":"SFLDS00003","name":"Haloacid Dehalogenase"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF56784","interpro_id":"IPR036412","interpro_name":"HAD-like superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":291,"score":0.0,"start":17}],"model":"0051888","name":"HAD-like"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR00099","interpro_id":"IPR000150","interpro_name":"Cof family","interpro_type":"Family","locations":[{"end":287,"score":1.1999999893170948e-36,"start":19}],"model":"TIGR00099","name":"Cof-type HAD-IIB family hydrolase"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR01484","interpro_id":"IPR006379","interpro_name":"HAD-superfamily hydrolase, subfamily IIB","interpro_type":"Family","locations":[{"end":259,"score":5.199999935954913e-22,"start":19}],"model":"TIGR01484","name":"HAD-IIB family hydrolase"}],"location":{"chromosome_name":"supercont5.3","end_pos":582450,"start_pos":581545,"strand":"forward"},"ortholog_annotations":[{"gene_uniquename":"SJAG_04579","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC25B8.12c","reference_uniquename":"PMID:21511999"}],"product":"HAD superfamily hydrolase, unknown role","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"subset_termids":["GO:0005634","GO:0016788","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000287":null,"GO:0005634":null,"GO:0005829":null,"GO:0016791":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04579.1"],"transcripts_by_uniquename":{"SJAG_04579.1":null},"uniprot_identifier":"B6K773","uniquename":"SJAG_04579"}


id: SJAG_04580
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[90729],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[90730],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[90731],"is_not":false,"summary":null,"term":"GO:0016706"}]},"dbxrefs":["InterPro:IPR026992","EnsemblGenomes-Tr:EEB09378","InterPro:IPR027443","UniProtKB/TrEMBL:B6K774","GOA:B6K774","InterPro:IPR005123","EnsemblGenomes-Gn:SJAG_04580"],"deletion_viability":"unknown","disordered_region_coords":[[11,14],[16,17],[152,153],[349,350]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"loz1","uniquename":"SJAG_04584"},{"name":"ypf1","uniquename":"SJAG_04583"},{"name":"pop100","uniquename":"SJAG_04582"},{"name":"tyw3","uniquename":"SJAG_05334"},{"name":"mal2","uniquename":"SJAG_04581"},{"name":"isp7","uniquename":"SJAG_04580"},{"uniquename":"SJAG_04579"},{"name":"apq12","uniquename":"SJAG_04578"},{"name":"arg12","uniquename":"SJAG_04577"},{"name":"rxt2","uniquename":"SJAG_04576"},{"name":"meu6","uniquename":"SJAG_04575"}],"genes_by_uniquename":{"SJAG_04580":null,"SPAC25B8.13c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.60.120.330","interpro_id":"IPR027443","interpro_name":"Isopenicillin N synthase-like superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":372,"score":0.0,"start":13}],"model":"5c3pD00","name":"B-lactam Antibiotic, Isopenicillin N Synthase; Chain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03171","interpro_id":"IPR044861","interpro_name":"Isopenicillin N synthase-like, Fe(2+) 2OG dioxygenase domain","interpro_type":"Domain","locations":[{"end":331,"score":1.5000000583807998e-17,"start":241}],"model":"PF03171","name":"2OG-Fe(II) oxygenase superfamily"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF14226","interpro_id":"IPR026992","interpro_name":"Non-haem dioxygenase N-terminal domain","interpro_type":"Domain","locations":[{"end":124,"score":2.2000000594311203e-19,"start":26}],"model":"PF14226","name":"non-haem dioxygenase in morphine synthesis N-terminal"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51471","interpro_id":"IPR005123","interpro_name":"Oxoglutarate/iron-dependent dioxygenase","interpro_type":"Domain","locations":[{"end":332,"score":0.0,"start":234}],"model":"PS51471","name":"Fe(2+) 2-oxoglutarate dioxygenase domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR47990","interpro_id":"IPR050231","interpro_name":"Iron/ascorbate-dependent oxidoreductase","interpro_type":"Family","locations":[{"end":355,"score":0.0,"start":24}],"model":"PTHR47990:SF272","name":"2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF51197","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":362,"score":0.0,"start":25}],"model":"0047027","name":"Clavaminate synthase-like"}],"location":{"chromosome_name":"supercont5.3","end_pos":580470,"start_pos":579298,"strand":"forward"},"low_complexity_region_coords":[[81,92],[149,166]],"name":"isp7","ortholog_annotations":[{"gene_uniquename":"SJAG_04580","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC25B8.13c","reference_uniquename":"PMID:21511999"}],"product":"2-OG-Fe(II) oxygenase superfamily protein","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"subset_termids":["GO:0016491","GO:0005829","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0016706":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04580.1"],"transcripts_by_uniquename":{"SJAG_04580.1":null},"uniprot_identifier":"B6K774","uniquename":"SJAG_04580"}


id: SJAG_04581
data:
  {"coiled_coil_coords":[[4,31]],"cv_annotations":{"biological_process":[{"annotations":[90737],"is_not":false,"summary":null,"term":"GO:0034080"},{"annotations":[90738],"is_not":false,"summary":null,"term":"GO:0000070"}],"cellular_component":[{"annotations":[90732],"is_not":false,"summary":null,"term":"GO:0000779"},{"annotations":[90733],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[90734],"is_not":false,"summary":null,"term":"GO:0000776"},{"annotations":[90735],"is_not":false,"summary":null,"term":"GO:0031511"},{"annotations":[90736],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["InterPro:IPR018464","GOA:B6K775","EnsemblGenomes-Tr:EEB09379","UniProtKB/TrEMBL:B6K775","EnsemblGenomes-Gn:SJAG_04581"],"deletion_viability":"unknown","disordered_region_coords":[[1,2],[32,55],[80,86],[88,92],[117,121],[123,123],[289,294]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pof8","uniquename":"SJAG_04586"},{"name":"loz1","uniquename":"SJAG_04584"},{"name":"ypf1","uniquename":"SJAG_04583"},{"name":"pop100","uniquename":"SJAG_04582"},{"name":"tyw3","uniquename":"SJAG_05334"},{"name":"mal2","uniquename":"SJAG_04581"},{"name":"isp7","uniquename":"SJAG_04580"},{"uniquename":"SJAG_04579"},{"name":"apq12","uniquename":"SJAG_04578"},{"name":"arg12","uniquename":"SJAG_04577"},{"name":"rxt2","uniquename":"SJAG_04576"}],"genes_by_uniquename":{"HGNC:28152":null,"SJAG_04581":null,"SPAC25B8.14":null,"YDR318W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF09496","interpro_id":"IPR018464","interpro_name":"Centromere protein O","interpro_type":"Family","locations":[{"end":235,"score":2.6000000374892807e-8,"start":129}],"model":"PF09496","name":"Cenp-O kinetochore centromere component"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR14582","interpro_id":"IPR018464","interpro_name":"Centromere protein O","interpro_type":"Family","locations":[{"end":226,"score":2.3000000612827948e-14,"start":4}],"model":"PTHR14582:SF1","name":"INNER KINETOCHORE SUBUNIT MAL2"}],"location":{"chromosome_name":"supercont5.3","end_pos":577956,"start_pos":577072,"strand":"reverse"},"name":"mal2","ortholog_annotations":[{"gene_uniquename":"SJAG_04581","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28152","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04581","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC25B8.14","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04581","ortholog_taxonid":4932,"ortholog_uniquename":"YDR318W","reference_uniquename":"PMID:29761456"}],"product":"CENP-O ortholog Mal2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0065003","GO:0000776","GO:0005634","GO:0000070","GO:0005829","GO:0006325","GO:0005694"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000070":null,"GO:0000776":null,"GO:0000779":null,"GO:0005634":null,"GO:0005829":null,"GO:0031511":null,"GO:0034080":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04581.1"],"transcripts_by_uniquename":{"SJAG_04581.1":null},"uniprot_identifier":"B6K775","uniquename":"SJAG_04581"}


id: SJAG_04582
data:
  {"cv_annotations":{"biological_process":[{"annotations":[90749],"is_not":false,"summary":null,"term":"GO:0000447"},{"annotations":[90750],"is_not":false,"summary":null,"term":"GO:0001682"},{"annotations":[90751],"is_not":false,"summary":null,"term":"GO:0008033"}],"cellular_component":[{"annotations":[90744],"is_not":false,"summary":null,"term":"GO:0005655"},{"annotations":[90745],"is_not":false,"summary":null,"term":"GO:0005730"},{"annotations":[90746],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[90747],"is_not":false,"summary":null,"term":"GO:0000172"},{"annotations":[90748],"is_not":false,"summary":null,"term":"GO:0030677"}],"molecular_function":[{"annotations":[90752],"is_not":false,"summary":null,"term":"GO:0000171"},{"annotations":[90753],"is_not":false,"summary":null,"term":"GO:0004526"},{"annotations":[90754],"is_not":false,"summary":null,"term":"GO:0000049"}]},"dbxrefs":["GOA:B6K777","UniProtKB/TrEMBL:B6K777","EnsemblGenomes-Gn:SJAG_04582","InterPro:IPR039182","EnsemblGenomes-Tr:EEB09381","InterPro:IPR009723","InterPro:IPR012590"],"deletion_viability":"unknown","disordered_region_coords":[[1,26],[55,58],[60,77],[84,86],[140,146]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"fsf1","uniquename":"SJAG_04588"},{"name":"ysh1","uniquename":"SJAG_04587"},{"name":"pof8","uniquename":"SJAG_04586"},{"name":"loz1","uniquename":"SJAG_04584"},{"name":"ypf1","uniquename":"SJAG_04583"},{"name":"pop100","uniquename":"SJAG_04582"},{"name":"tyw3","uniquename":"SJAG_05334"},{"name":"mal2","uniquename":"SJAG_04581"},{"name":"isp7","uniquename":"SJAG_04580"},{"uniquename":"SJAG_04579"},{"name":"apq12","uniquename":"SJAG_04578"}],"genes_by_uniquename":{"HGNC:30129":null,"SJAG_04582":null,"SPAC25B8.16":null,"YNL221C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.1360.120","interpro_id":"IPR027266","interpro_name":"GTP-binding protein TrmE/Aminomethyltransferase GcvT, domain 1","interpro_type":"Homologous_superfamily","locations":[{"end":656,"score":3.6000000136482413e-7,"start":180}],"model":"2gahA02","name":"Probable tRNA modification gtpase trme; domain 1"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF06978","interpro_id":"IPR009723","interpro_name":"Pop1, N-terminal","interpro_type":"Domain","locations":[{"end":233,"score":0.0,"start":43}],"model":"PF06978","name":"Ribonucleases P/MRP protein subunit POP1, N-terminal"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08170","interpro_id":"IPR012590","interpro_name":"POPLD domain","interpro_type":"Domain","locations":[{"end":550,"score":5.999999778285218e-28,"start":453}],"model":"PF08170","name":"POPLD (NUC188) domain"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR22731","interpro_id":"IPR039182","interpro_name":"Ribonucleases P/MRP protein subunit Pop1","interpro_type":"Family","locations":[{"end":675,"score":0.0,"start":564}],"model":"PTHR22731:SF3","name":"RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF103025","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":503,"score":0.000015699999494245276,"start":303}],"model":"0044877","name":"Folate-binding domain"}],"location":{"chromosome_name":"supercont5.3","end_pos":575902,"start_pos":573869,"strand":"reverse"},"low_complexity_region_coords":[[390,406]],"name":"pop100","ortholog_annotations":[{"gene_uniquename":"SJAG_04582","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30129","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04582","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC25B8.16","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04582","ortholog_taxonid":4932,"ortholog_uniquename":"YNL221C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04582","ortholog_taxonid":4932,"ortholog_uniquename":"YNL221C","reference_uniquename":"PMID:26896847"}],"product":"RNase P and RNase MRP subunit Pop100","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0006399","GO:0140101","GO:0005634","GO:0005730","GO:0042254","GO:0140098","GO:0016788"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000049":null,"GO:0000171":null,"GO:0000172":null,"GO:0000447":null,"GO:0001682":null,"GO:0004526":null,"GO:0005634":null,"GO:0005655":null,"GO:0005730":null,"GO:0008033":null,"GO:0030677":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04582.1"],"transcripts_by_uniquename":{"SJAG_04582.1":null},"uniprot_identifier":"B6K777","uniquename":"SJAG_04582"}


id: SJAG_04583
data:
  {"cv_annotations":{"biological_process":[{"annotations":[90759],"is_not":false,"summary":null,"term":"GO:0036503"},{"annotations":[90760],"is_not":false,"summary":null,"term":"GO:0033619"},{"annotations":[90761],"is_not":false,"summary":null,"term":"GO:0006465"}],"cellular_component":[{"annotations":[90755],"is_not":false,"summary":null,"term":"GO:0098554"},{"annotations":[90756],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[90757],"is_not":false,"summary":null,"term":"GO:0098553"},{"annotations":[90758],"is_not":false,"summary":null,"term":"GO:1990578"}],"molecular_function":[{"annotations":[90762],"is_not":false,"summary":null,"term":"GO:0042500"}]},"dbxrefs":["InterPro:IPR007369","GOA:B6K778","EnsemblGenomes-Gn:SJAG_04583","EnsemblGenomes-Tr:EEB09382","InterPro:IPR006639","UniProtKB/TrEMBL:B6K778"],"deletion_viability":"unknown","disordered_region_coords":[[215,221],[304,307],[293,293]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"uap56","uniquename":"SJAG_04589"},{"name":"fsf1","uniquename":"SJAG_04588"},{"name":"ysh1","uniquename":"SJAG_04587"},{"name":"pof8","uniquename":"SJAG_04586"},{"name":"loz1","uniquename":"SJAG_04584"},{"name":"ypf1","uniquename":"SJAG_04583"},{"name":"pop100","uniquename":"SJAG_04582"},{"name":"tyw3","uniquename":"SJAG_05334"},{"name":"mal2","uniquename":"SJAG_04581"},{"name":"isp7","uniquename":"SJAG_04580"},{"uniquename":"SJAG_04579"}],"genes_by_uniquename":{"HGNC:16435":null,"SJAG_04583":null,"SPAC25B8.17":null,"YKL100C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF04258","interpro_id":"IPR007369","interpro_name":"Peptidase A22B, signal peptide peptidase","interpro_type":"Family","locations":[{"end":290,"score":0.0,"start":27}],"model":"PF04258","name":"Signal peptide peptidase"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12174","interpro_id":"IPR007369","interpro_name":"Peptidase A22B, signal peptide peptidase","interpro_type":"Family","locations":[{"end":300,"score":0.0,"start":4}],"model":"PTHR12174:SF23","name":"SIGNAL PEPTIDE PEPTIDASE"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00730","interpro_id":"IPR006639","interpro_name":"Presenilin/signal peptide peptidase","interpro_type":"Family","locations":[{"end":279,"score":0.0,"start":29}],"model":"SM00730","name":"Presenilin, signal peptide peptidase, family"}],"location":{"chromosome_name":"supercont5.3","end_pos":573668,"start_pos":572745,"strand":"reverse"},"low_complexity_region_coords":[[294,303]],"name":"ypf1","ortholog_annotations":[{"gene_uniquename":"SJAG_04583","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16435","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04583","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC25B8.17","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04583","ortholog_taxonid":4932,"ortholog_uniquename":"YKL100C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04583","ortholog_taxonid":4932,"ortholog_uniquename":"YKL100C","reference_uniquename":"PMID:26896847"}],"product":"intramembrane aspartyl protease of the perinuclear ER membrane Ypf1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0008233","GO:0140096","GO:0051604","GO:0030163","GO:0005789","GO:0005783"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005783":null,"GO:0006465":null,"GO:0033619":null,"GO:0036503":null,"GO:0042500":null,"GO:0098553":null,"GO:0098554":null,"GO:1990578":null},"tm_domain_coords":[[38,60],[67,84],[90,107],[112,130],[140,162],[183,202],[254,276]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04583.1"],"transcripts_by_uniquename":{"SJAG_04583.1":null},"uniprot_identifier":"B6K778","uniquename":"SJAG_04583"}


id: SJAG_04584
data:
  {"cv_annotations":{"biological_process":[{"annotations":[90764],"is_not":false,"summary":null,"term":"GO:0006882"},{"annotations":[90765],"is_not":false,"summary":null,"term":"GO:0000122"}],"cellular_component":[{"annotations":[90763],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[90766],"is_not":false,"summary":null,"term":"GO:0001227"},{"annotations":[90767],"is_not":false,"summary":null,"term":"GO:0000978"},{"annotations":[90768],"is_not":false,"summary":null,"term":"GO:0043565"}]},"dbxrefs":["InterPro:IPR013087","UniProtKB/TrEMBL:B6K779","GOA:B6K779","EnsemblGenomes-Gn:SJAG_04584","InterPro:IPR036236","EnsemblGenomes-Tr:EEB09383"],"deletion_viability":"unknown","disordered_region_coords":[[36,131],[140,141],[153,159],[242,250],[252,254],[272,274],[276,400],[404,452],[477,479],[514,515],[1,22]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"slt1","uniquename":"SJAG_04590"},{"name":"uap56","uniquename":"SJAG_04589"},{"name":"fsf1","uniquename":"SJAG_04588"},{"name":"ysh1","uniquename":"SJAG_04587"},{"name":"pof8","uniquename":"SJAG_04586"},{"name":"loz1","uniquename":"SJAG_04584"},{"name":"ypf1","uniquename":"SJAG_04583"},{"name":"pop100","uniquename":"SJAG_04582"},{"name":"tyw3","uniquename":"SJAG_05334"},{"name":"mal2","uniquename":"SJAG_04581"},{"name":"isp7","uniquename":"SJAG_04580"}],"genes_by_uniquename":{"SJAG_04584":null,"SPAC25B8.19c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.160.60","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":483,"score":1.500000013088254e-9,"start":461},{"end":515,"score":3.7000001044777686e-13,"start":484}],"model":"2emgA01","name":"Classic Zinc Finger"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00096","interpro_id":"IPR013087","interpro_name":"Zinc finger C2H2-type","interpro_type":"Domain","locations":[{"end":483,"score":6.699999809265137,"start":461},{"end":513,"score":0.47999998927116394,"start":489}],"model":"PF00096","name":"Zinc finger, C2H2 type"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00028","interpro_id":"IPR013087","interpro_name":"Zinc finger C2H2-type","interpro_type":"Domain","locations":[{"end":483,"score":0.0,"start":463},{"end":513,"score":0.0,"start":491}],"model":"PS00028","name":"Zinc finger C2H2 type domain signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50157","interpro_id":"IPR013087","interpro_name":"Zinc finger C2H2-type","interpro_type":"Domain","locations":[{"end":488,"score":0.0,"start":461},{"end":515,"score":0.0,"start":489}],"model":"PS50157","name":"Zinc finger C2H2 type domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR14003","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":513,"score":4.199999866715195e-21,"start":63}],"model":"PTHR14003:SF23","name":"TRANSCRIPTIONAL REPRESSOR PROTEIN YY"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00355","interpro_id":"IPR013087","interpro_name":"Zinc finger C2H2-type","interpro_type":"Domain","locations":[{"end":483,"score":0.02199999988079071,"start":461},{"end":513,"score":0.00011000000085914508,"start":489}],"model":"SM00355","name":"zinc finger"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF57667","interpro_id":"IPR036236","interpro_name":"Zinc finger C2H2 superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":513,"score":1.0900000283061654e-14,"start":461}],"model":"0052279","name":"beta-beta-alpha zinc fingers"}],"location":{"chromosome_name":"supercont5.3","end_pos":571856,"start_pos":570309,"strand":"forward"},"low_complexity_region_coords":[[23,35],[177,189]],"name":"loz1","ortholog_annotations":[{"gene_uniquename":"SJAG_04584","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC25B8.19c","reference_uniquename":"PMID:21511999"}],"product":"DNA-binding transcription factor zf-C2H2 type, Loz1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"subset_termids":["GO:0006351","GO:0098771","GO:0005634","GO:0006355","GO:0003700"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000122":null,"GO:0000978":null,"GO:0001227":null,"GO:0005634":null,"GO:0006882":null,"GO:0043565":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04584.1"],"transcripts_by_uniquename":{"SJAG_04584.1":null},"uniprot_identifier":"B6K779","uniquename":"SJAG_04584"}


id: SJAG_04586
data:
  {"cv_annotations":{"biological_process":[{"annotations":[86663],"is_not":false,"summary":null,"term":"GO:0071027"},{"annotations":[86664],"is_not":false,"summary":null,"term":"GO:0016180"},{"annotations":[86665,86666],"is_not":false,"summary":null,"term":"GO:1904868"},{"annotations":[86667],"is_not":false,"summary":null,"term":"GO:0090669"},{"annotations":[86668,86669],"is_not":false,"summary":null,"term":"GO:0007004"}],"cellular_component":[{"annotations":[86657],"is_not":false,"summary":null,"term":"GO:0140445"},{"annotations":[86658],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[86659],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[86660],"is_not":false,"summary":null,"term":"GO:0005732"},{"annotations":[86661,86662],"is_not":false,"summary":null,"term":"GO:0005697"}],"molecular_function":[{"annotations":[86670],"is_not":false,"summary":null,"term":"GO:0003682"},{"annotations":[86671],"is_not":false,"summary":null,"term":"GO:0070034"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K780","GOA:B6K780","EnsemblGenomes-Tr:EEB09384","EnsemblGenomes-Gn:SJAG_04586","InterPro:IPR012677","InterPro:IPR014886"],"deletion_viability":"unknown","disordered_region_coords":[[5,6],[10,27],[29,42],[44,66],[68,69],[107,108],[111,113],[250,290]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_04591"},{"name":"slt1","uniquename":"SJAG_04590"},{"name":"uap56","uniquename":"SJAG_04589"},{"name":"fsf1","uniquename":"SJAG_04588"},{"name":"ysh1","uniquename":"SJAG_04587"},{"name":"pof8","uniquename":"SJAG_04586"},{"name":"loz1","uniquename":"SJAG_04584"},{"name":"ypf1","uniquename":"SJAG_04583"},{"name":"pop100","uniquename":"SJAG_04582"},{"name":"tyw3","uniquename":"SJAG_05334"},{"name":"mal2","uniquename":"SJAG_04581"}],"genes_by_uniquename":{"HGNC:24912":null,"SJAG_04586":null,"SPAC17G6.17":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.70.330","interpro_id":"IPR012677","interpro_name":"Nucleotide-binding alpha-beta plait domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":405,"score":3.6000000203095794e-10,"start":281}],"model":"1owxA00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF19977","interpro_id":"IPR045537","interpro_name":"La-related protein 7 homolog, xRRM domain","interpro_type":"Domain","locations":[{"end":405,"score":1.099999972191823e-26,"start":292}],"model":"PF19977","name":"xRRM domain"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51939","interpro_id":"IPR014886","interpro_name":"La protein, xRRM domain","interpro_type":"Domain","locations":[{"end":405,"score":0.0,"start":292}],"model":"PS51939","name":"xRRM domain profile"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd21611","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":377,"score":8.21567276648997e-41,"start":297}],"model":"cd21611","name":"RNA recognition motif (RRM) found in Schizosaccharomyces pombe protein Pof8 and similar proteins"}],"location":{"chromosome_name":"supercont5.3","end_pos":568460,"start_pos":567243,"strand":"forward"},"low_complexity_region_coords":[[120,134]],"name":"pof8","ortholog_annotations":[{"gene_uniquename":"SJAG_04586","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24912","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04586","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17G6.17","reference_uniquename":"PMID:21511999"}],"product":"LARP7 family RNA-binding protein Pof8/Lar7","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0032200","GO:0005829","GO:0065003","GO:0016073","GO:0005634","GO:0005694"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003682":null,"GO:0005634":null,"GO:0005697":null,"GO:0005732":null,"GO:0005829":null,"GO:0007004":null,"GO:0016180":null,"GO:0070034":null,"GO:0071027":null,"GO:0090669":null,"GO:0140445":null,"GO:1904868":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04586.1"],"transcripts_by_uniquename":{"SJAG_04586.1":null},"uniprot_identifier":"B6K780","uniquename":"SJAG_04586"}


id: SJAG_04587
data:
  {"cv_annotations":{"biological_process":[{"annotations":[86653],"is_not":false,"summary":null,"term":"GO:0180010"}],"cellular_component":[{"annotations":[86650],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[86651],"is_not":false,"summary":null,"term":"GO:0005847"},{"annotations":[86652],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[86654],"is_not":false,"summary":null,"term":"GO:0004534"},{"annotations":[86655],"is_not":false,"summary":null,"term":"GO:0003723"},{"annotations":[86656],"is_not":false,"summary":null,"term":"GO:0004521"}]},"dbxrefs":["InterPro:IPR022712","GOA:B6K781","InterPro:IPR036866","InterPro:IPR001279","UniProtKB/TrEMBL:B6K781","EnsemblGenomes-Tr:EEB09385","InterPro:IPR011108","InterPro:IPR021718","EnsemblGenomes-Gn:SJAG_04587"],"deletion_viability":"unknown","disordered_region_coords":[[194,195],[606,608],[768,800],[685,724],[740,755]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"erv46","uniquename":"SJAG_04592"},{"uniquename":"SJAG_04591"},{"name":"slt1","uniquename":"SJAG_04590"},{"name":"uap56","uniquename":"SJAG_04589"},{"name":"fsf1","uniquename":"SJAG_04588"},{"name":"ysh1","uniquename":"SJAG_04587"},{"name":"pof8","uniquename":"SJAG_04586"},{"name":"loz1","uniquename":"SJAG_04584"},{"name":"ypf1","uniquename":"SJAG_04583"},{"name":"pop100","uniquename":"SJAG_04582"},{"name":"tyw3","uniquename":"SJAG_05334"}],"genes_by_uniquename":{"HGNC:2326":null,"SJAG_04587":null,"SPAC17G6.16c":null,"YLR277C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.10890","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":402,"score":0.0,"start":221}],"model":"6i1dA02","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.60.15.10","interpro_id":"IPR036866","interpro_name":"Ribonuclease Z/Hydroxyacylglutathione hydrolase-like","interpro_type":"Homologous_superfamily","locations":[{"end":430,"score":0.0,"start":24}],"model":"6i1dA01","name":"Ribonuclease Z/Hydroxyacylglutathione hydrolase-like"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF07521","interpro_id":"IPR011108","interpro_name":"Zn-dependent metallo-hydrolase, RNA specificity domain","interpro_type":"Domain","locations":[{"end":443,"score":0.00014000000373926014,"start":389}],"model":"PF07521","name":"Zn-dependent metallo-hydrolase RNA specificity domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF10996","interpro_id":"IPR022712","interpro_name":"Beta-Casp domain","interpro_type":"Domain","locations":[{"end":372,"score":1.7999999334855654e-27,"start":253}],"model":"PF10996","name":"Beta-Casp domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF11718","interpro_id":"IPR021718","interpro_name":"Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term","interpro_type":"Domain","locations":[{"end":684,"score":0.0,"start":486}],"model":"PF11718","name":"Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF16661","interpro_id":"IPR001279","interpro_name":"Metallo-beta-lactamase","interpro_type":"Domain","locations":[{"end":200,"score":1.700000022048607e-16,"start":36}],"model":"PF16661","name":"Metallo-beta-lactamase superfamily domain"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11203","interpro_id":"IPR050698","interpro_name":"RNA Processing Metallo-Beta-Lactamase Domain-Containing Protein","interpro_type":"Family","locations":[{"end":681,"score":0.0,"start":22}],"model":"PTHR11203:SF11","name":"CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR FAMILY MEMBER"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00849","interpro_id":"IPR001279","interpro_name":"Metallo-beta-lactamase","interpro_type":"Domain","locations":[{"end":241,"score":5.0000000843119176e-17,"start":31}],"model":"SM00849","name":"Metallo-beta-lactamase superfamily"},{"dbname":"SMART","evidence":"Smart scan","id":"SM01027","interpro_id":"IPR022712","interpro_name":"Beta-Casp domain","interpro_type":"Domain","locations":[{"end":374,"score":0.0,"start":253}],"model":"SM01027","name":"Beta-Casp domain"},{"dbname":"SMART","evidence":"Smart scan","id":"SM01098","interpro_id":"IPR021718","interpro_name":"Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term","interpro_type":"Domain","locations":[{"end":685,"score":0.0,"start":483}],"model":"SM01098","name":""},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF56281","interpro_id":"IPR036866","interpro_name":"Ribonuclease Z/Hydroxyacylglutathione hydrolase-like","interpro_type":"Homologous_superfamily","locations":[{"end":465,"score":0.0,"start":16}],"model":"0054104","name":"Metallo-hydrolase/oxidoreductase"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd16292","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":212,"score":0.0,"start":19}],"model":"cd16292","name":"cleavage and polyadenylation specificity factor (CPSF) subunit 3 and related proteins; MBL-fold metallo-hydrolase domain"}],"location":{"chromosome_name":"supercont5.3","end_pos":566903,"start_pos":564117,"strand":"reverse"},"low_complexity_region_coords":[[725,739],[756,767]],"name":"ysh1","ortholog_annotations":[{"gene_uniquename":"SJAG_04587","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2326","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04587","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17G6.16c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04587","ortholog_taxonid":4932,"ortholog_uniquename":"YLR277C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04587","ortholog_taxonid":4932,"ortholog_uniquename":"YLR277C","reference_uniquename":"PMID:26896847"}],"product":"mRNA cleavage and polyadenylation specificity factor complex endoribonuclease subunit Ysh1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0016788","GO:0140098","GO:0004527","GO:0005829","GO:0005634","GO:0016071"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003723":null,"GO:0004521":null,"GO:0004534":null,"GO:0005634":null,"GO:0005829":null,"GO:0005847":null,"GO:0180010":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04587.1"],"transcripts_by_uniquename":{"SJAG_04587.1":null},"uniprot_identifier":"B6K781","uniquename":"SJAG_04587"}


id: SJAG_04588
data:
  {"cv_annotations":{"biological_process":[{"annotations":[64707],"is_not":false,"summary":null,"term":"GO:0015825"},{"annotations":[64708],"is_not":false,"summary":null,"term":"GO:0034220"},{"annotations":[86646],"is_not":false,"summary":null,"term":"GO:0006811"},{"annotations":[86647],"is_not":false,"summary":null,"term":"GO:0140300"}],"cellular_component":[{"annotations":[86644],"is_not":false,"summary":null,"term":"GO:0005743"},{"annotations":[86645],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[86648],"is_not":false,"summary":null,"term":"GO:0015194"},{"annotations":[86649],"is_not":false,"summary":null,"term":"GO:0015075"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB09386","UniProtKB/TrEMBL:B6K782","GOA:B6K782","EnsemblGenomes-Gn:SJAG_04588","InterPro:IPR004686"],"deletion_viability":"unknown","disordered_region_coords":[[3,4],[298,301]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mpc2","uniquename":"SJAG_04593"},{"name":"erv46","uniquename":"SJAG_04592"},{"uniquename":"SJAG_04591"},{"name":"slt1","uniquename":"SJAG_04590"},{"name":"uap56","uniquename":"SJAG_04589"},{"name":"fsf1","uniquename":"SJAG_04588"},{"name":"ysh1","uniquename":"SJAG_04587"},{"name":"pof8","uniquename":"SJAG_04586"},{"name":"loz1","uniquename":"SJAG_04584"},{"name":"ypf1","uniquename":"SJAG_04583"},{"name":"pop100","uniquename":"SJAG_04582"}],"genes_by_uniquename":{"HGNC:16073":null,"HGNC:16085":null,"HGNC:16086":null,"HGNC:16087":null,"HGNC:16088":null,"SJAG_04588":null,"SPAC17G6.15c":null,"YOR271C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03820","interpro_id":"IPR004686","interpro_name":"Tricarboxylate/iron carrier","interpro_type":"Family","locations":[{"end":322,"score":0.0,"start":6}],"model":"PF03820","name":"Sideroflexins"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11153","interpro_id":"IPR004686","interpro_name":"Tricarboxylate/iron carrier","interpro_type":"Family","locations":[{"end":322,"score":0.0,"start":4}],"model":"PTHR11153:SF6","name":"SIDEROFLEXIN"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR00798","interpro_id":"IPR004686","interpro_name":"Tricarboxylate/iron carrier","interpro_type":"Family","locations":[{"end":322,"score":0.0,"start":5}],"model":"TIGR00798","name":"sideroflexin family mitochondrial carrier protein"}],"location":{"chromosome_name":"supercont5.3","end_pos":563503,"start_pos":562136,"strand":"reverse"},"low_complexity_region_coords":[[119,133]],"name":"fsf1","ortholog_annotations":[{"gene_uniquename":"SJAG_04588","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16073","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04588","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16085","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04588","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16086","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04588","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16087","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04588","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16088","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04588","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17G6.15c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04588","ortholog_taxonid":4932,"ortholog_uniquename":"YOR271C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04588","ortholog_taxonid":4932,"ortholog_uniquename":"YOR271C","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial carrier, serine Fsf1","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0022857","GO:0055085","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005739":null,"GO:0005743":null,"GO:0006811":null,"GO:0015075":null,"GO:0015194":null,"GO:0015825":null,"GO:0034220":null,"GO:0140300":null},"tm_domain_coords":[[174,196],[265,287]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04588.1"],"transcripts_by_uniquename":{"SJAG_04588.1":null},"uniprot_identifier":"B6K782","uniquename":"SJAG_04588"}


id: SJAG_04589
data:
  {"cv_annotations":{"biological_process":[{"annotations":[86638],"is_not":false,"summary":null,"term":"GO:0045292"},{"annotations":[86639],"is_not":false,"summary":null,"term":"GO:0006406"}],"cellular_component":[{"annotations":[86636],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[86637],"is_not":false,"summary":null,"term":"GO:0000346"}],"molecular_function":[{"annotations":[86640],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[86641],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[86642],"is_not":false,"summary":null,"term":"GO:0003729"},{"annotations":[86643],"is_not":false,"summary":null,"term":"GO:0003724"}]},"dbxrefs":["GOA:B6K783","InterPro:IPR014014","EnsemblGenomes-Gn:SJAG_04589","InterPro:IPR011545","InterPro:IPR014001","InterPro:IPR001650","UniProtKB/TrEMBL:B6K783","InterPro:IPR027417","EnsemblGenomes-Tr:EEB09387"],"deletion_viability":"unknown","disordered_region_coords":[[17,22],[40,41],[3,11]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cfh1","uniquename":"SJAG_04595"},{"name":"mpc2","uniquename":"SJAG_04593"},{"name":"erv46","uniquename":"SJAG_04592"},{"uniquename":"SJAG_04591"},{"name":"slt1","uniquename":"SJAG_04590"},{"name":"uap56","uniquename":"SJAG_04589"},{"name":"fsf1","uniquename":"SJAG_04588"},{"name":"ysh1","uniquename":"SJAG_04587"},{"name":"pof8","uniquename":"SJAG_04586"},{"name":"loz1","uniquename":"SJAG_04584"},{"name":"ypf1","uniquename":"SJAG_04583"}],"genes_by_uniquename":{"HGNC:13917":null,"HGNC:17821":null,"SJAG_04589":null,"SPAC17G6.14c":null,"YDL084W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.300","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":265,"score":0.0,"start":47},{"end":434,"score":0.0,"start":266}],"model":"5supC01","name":"P-loop containing nucleotide triphosphate hydrolases"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00270","interpro_id":"IPR011545","interpro_name":"DEAD/DEAH box helicase domain","interpro_type":"Domain","locations":[{"end":243,"score":9.899999647300882e-35,"start":76}],"model":"PF00270","name":"DEAD/DEAH box helicase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00271","interpro_id":"IPR001650","interpro_name":"Helicase, C-terminal domain-like","interpro_type":"Domain","locations":[{"end":390,"score":3.400000054115085e-26,"start":282}],"model":"PF00271","name":"Helicase conserved C-terminal domain"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51192","interpro_id":"IPR014001","interpro_name":"Helicase superfamily 1/2, ATP-binding domain","interpro_type":"Domain","locations":[{"end":257,"score":0.0,"start":82}],"model":"PS51192","name":"Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51194","interpro_id":"IPR001650","interpro_name":"Helicase, C-terminal domain-like","interpro_type":"Domain","locations":[{"end":430,"score":0.0,"start":269}],"model":"PS51194","name":"Superfamilies 1 and 2 helicase C-terminal domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51195","interpro_id":"IPR014014","interpro_name":"RNA helicase, DEAD-box type, Q motif","interpro_type":"Domain","locations":[{"end":79,"score":0.0,"start":51}],"model":"PS51195","name":"DEAD-box RNA helicase Q motif profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR47958","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":417,"score":0.0,"start":50}],"model":"PTHR47958:SF104","name":"ATP-DEPENDENT RNA HELICASE DBP3"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00487","interpro_id":"IPR014001","interpro_name":"Helicase superfamily 1/2, ATP-binding domain","interpro_type":"Domain","locations":[{"end":273,"score":0.0,"start":70}],"model":"SM00487","name":"DEAD-like helicases superfamily"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00490","interpro_id":"IPR001650","interpro_name":"Helicase, C-terminal domain-like","interpro_type":"Domain","locations":[{"end":390,"score":1.1999999991033148e-31,"start":309}],"model":"SM00490","name":"helicase superfamily c-terminal domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52540","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":409,"score":0.0,"start":120}],"model":"0050677","name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd17950","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":259,"score":0.0,"start":50}],"model":"cd17950","name":"DEAD-box helicase domain of DEAD box protein 39"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd18787","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":399,"score":0.0,"start":270}],"model":"cd18787","name":"C-terminal helicase domain of the DEAD box helicases"}],"location":{"chromosome_name":"supercont5.3","end_pos":561619,"start_pos":560315,"strand":"reverse"},"low_complexity_region_coords":[[12,16],[23,42]],"name":"uap56","ortholog_annotations":[{"gene_uniquename":"SJAG_04589","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:13917","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04589","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17821","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04589","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17G6.14c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04589","ortholog_taxonid":4932,"ortholog_uniquename":"YDL084W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04589","ortholog_taxonid":4932,"ortholog_uniquename":"YDL084W","reference_uniquename":"PMID:26896847"}],"product":"TREX complex subunit, ATP-dependent RNA helicase Uap56","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0016071","GO:0140098","GO:0005634","GO:0006913","GO:0016887"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000346":null,"GO:0003724":null,"GO:0003729":null,"GO:0005524":null,"GO:0005634":null,"GO:0006406":null,"GO:0016887":null,"GO:0045292":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04589.1"],"transcripts_by_uniquename":{"SJAG_04589.1":null},"uniprot_identifier":"B6K783","uniquename":"SJAG_04589"}


id: SJAG_04590
data:
  {"coiled_coil_coords":[[27,57]],"cv_annotations":{"cellular_component":[{"annotations":[86635],"is_not":false,"summary":null,"term":"GO:0005829"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_04590","EnsemblGenomes-Tr:EEB09388","UniProtKB/TrEMBL:B6K784"],"deletion_viability":"unknown","disordered_region_coords":[[109,117],[372,383],[151,330],[344,359]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"swc2","uniquename":"SJAG_04596"},{"name":"cfh1","uniquename":"SJAG_04595"},{"name":"mpc2","uniquename":"SJAG_04593"},{"name":"erv46","uniquename":"SJAG_04592"},{"uniquename":"SJAG_04591"},{"name":"slt1","uniquename":"SJAG_04590"},{"name":"uap56","uniquename":"SJAG_04589"},{"name":"fsf1","uniquename":"SJAG_04588"},{"name":"ysh1","uniquename":"SJAG_04587"},{"name":"pof8","uniquename":"SJAG_04586"},{"name":"loz1","uniquename":"SJAG_04584"}],"genes_by_uniquename":{"SJAG_04590":null,"SPAC17G6.13":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.3","end_pos":559859,"start_pos":558411,"strand":"forward"},"low_complexity_region_coords":[[22,26],[32,41],[70,84],[107,127],[331,343],[360,371]],"name":"slt1","ortholog_annotations":[{"gene_uniquename":"SJAG_04590","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17G6.13","reference_uniquename":"PMID:21511999"}],"product":"Schizosaccharomyces specific protein Slt1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"subset_termids":["GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005829":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04590.1"],"transcripts_by_uniquename":{"SJAG_04590.1":null},"uniprot_identifier":"B6K784","uniquename":"SJAG_04590"}


id: SJAG_04591
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[90423],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[90424],"is_not":false,"summary":null,"term":"GO:0051286"},{"annotations":[90425],"is_not":false,"summary":null,"term":"GO:0005737"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB09389","InterPro:IPR008927","EnsemblGenomes-Gn:SJAG_04591","InterPro:IPR013328","GOA:B6K785","InterPro:IPR013332","UniProtKB/TrEMBL:B6K785"],"deletion_viability":"unknown","disordered_region_coords":[[173,177],[261,265],[268,271],[321,373],[376,409],[417,419],[445,471],[425,431]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sid2","uniquename":"SJAG_04597"},{"name":"swc2","uniquename":"SJAG_04596"},{"name":"cfh1","uniquename":"SJAG_04595"},{"name":"mpc2","uniquename":"SJAG_04593"},{"name":"erv46","uniquename":"SJAG_04592"},{"uniquename":"SJAG_04591"},{"name":"slt1","uniquename":"SJAG_04590"},{"name":"uap56","uniquename":"SJAG_04589"},{"name":"fsf1","uniquename":"SJAG_04588"},{"name":"ysh1","uniquename":"SJAG_04587"},{"name":"pof8","uniquename":"SJAG_04586"}],"genes_by_uniquename":{"SJAG_04591":null,"SPAC24B11.07c":null,"YDR251W":null,"YPL032C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.720","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":191,"score":3.999999935100636e-17,"start":7}],"model":"3i83A01","name":"NAD(P)-binding Rossmann-like Domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF02558","interpro_id":"IPR013332","interpro_name":"Ketopantoate reductase, N-terminal domain","interpro_type":"Domain","locations":[{"end":165,"score":0.00005999999848427251,"start":11}],"model":"PF02558","name":"Ketopantoate reductase PanE/ApbA"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR21708","interpro_id":"IPR051402","interpro_name":"Ketopantoate Reductase-Related","interpro_type":"Family","locations":[{"end":334,"score":0.0,"start":4}],"model":"PTHR21708:SF25","name":"PROBABLE 2-DEHYDROPANTOATE 2-REDUCTASE"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF48179","interpro_id":"IPR008927","interpro_name":"6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":313,"score":0.0000883999964571558,"start":206}],"model":"0040234","name":"6-phosphogluconate dehydrogenase C-terminal domain-like"}],"location":{"chromosome_name":"supercont5.3","end_pos":556279,"start_pos":554757,"strand":"forward"},"low_complexity_region_coords":[[432,444]],"ortholog_annotations":[{"gene_uniquename":"SJAG_04591","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC24B11.07c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04591","ortholog_taxonid":4932,"ortholog_uniquename":"YDR251W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04591","ortholog_taxonid":4932,"ortholog_uniquename":"YDR251W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_04591","ortholog_taxonid":4932,"ortholog_uniquename":"YPL032C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04591","ortholog_taxonid":4932,"ortholog_uniquename":"YPL032C","reference_uniquename":"PMID:26896847"}],"product":"oxidoreductase","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005737":null,"GO:0032153":null,"GO:0051286":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04591.1"],"transcripts_by_uniquename":{"SJAG_04591.1":null},"uniprot_identifier":"B6K785","uniquename":"SJAG_04591"}


id: SJAG_04592
data:
  {"cv_annotations":{"biological_process":[{"annotations":[90430],"is_not":false,"summary":null,"term":"GO:0006888"},{"annotations":[90431],"is_not":false,"summary":null,"term":"GO:0006886"},{"annotations":[90432],"is_not":false,"summary":null,"term":"GO:0006890"}],"cellular_component":[{"annotations":[90426],"is_not":false,"summary":null,"term":"GO:0030134"},{"annotations":[90427],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[90428],"is_not":false,"summary":null,"term":"GO:0005789"},{"annotations":[90429],"is_not":false,"summary":null,"term":"GO:0000139"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB09390","InterPro:IPR012936","EnsemblGenomes-Gn:SJAG_04592","GOA:B6K786","InterPro:IPR039542","UniProtKB/TrEMBL:B6K786"],"deletion_viability":"unknown","disordered_region_coords":[[129,130],[226,242],[244,272],[304,330]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"erp5","uniquename":"SJAG_04598"},{"name":"sid2","uniquename":"SJAG_04597"},{"name":"swc2","uniquename":"SJAG_04596"},{"name":"cfh1","uniquename":"SJAG_04595"},{"name":"mpc2","uniquename":"SJAG_04593"},{"name":"erv46","uniquename":"SJAG_04592"},{"uniquename":"SJAG_04591"},{"name":"slt1","uniquename":"SJAG_04590"},{"name":"uap56","uniquename":"SJAG_04589"},{"name":"fsf1","uniquename":"SJAG_04588"},{"name":"ysh1","uniquename":"SJAG_04587"}],"genes_by_uniquename":{"HGNC:15927":null,"SJAG_04592":null,"SPAC24B11.08c":null,"YAL042W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF07970","interpro_id":"IPR012936","interpro_name":"Endoplasmic reticulum vesicle transporter, C-terminal","interpro_type":"Domain","locations":[{"end":381,"score":0.0,"start":142}],"model":"PF07970","name":"Endoplasmic reticulum vesicle transporter"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF13850","interpro_id":"IPR039542","interpro_name":"Endoplasmic reticulum vesicle transporter, N-terminal","interpro_type":"Domain","locations":[{"end":96,"score":9.49999996993992e-28,"start":7}],"model":"PF13850","name":"Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC)"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR10984","interpro_id":"IPR045888","interpro_name":"Endoplasmic reticulum vesicle transporter","interpro_type":"Family","locations":[{"end":392,"score":0.0,"start":1}],"model":"PTHR10984:SF25","name":"ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN"}],"location":{"chromosome_name":"supercont5.3","end_pos":553788,"start_pos":552604,"strand":"forward"},"low_complexity_region_coords":[[30,43]],"name":"erv46","ortholog_annotations":[{"gene_uniquename":"SJAG_04592","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:15927","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04592","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC24B11.08c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04592","ortholog_taxonid":4932,"ortholog_uniquename":"YAL042W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04592","ortholog_taxonid":4932,"ortholog_uniquename":"YAL042W","reference_uniquename":"PMID:26896847"}],"product":"COPII-coated vesicle component Erv46","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0005794","GO:0005783","GO:0005789","GO:0016192","GO:0031410"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000139":null,"GO:0005783":null,"GO:0005789":null,"GO:0006886":null,"GO:0006888":null,"GO:0006890":null,"GO:0030134":null},"tm_domain_coords":[[24,46],[358,380]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04592.1"],"transcripts_by_uniquename":{"SJAG_04592.1":null},"uniprot_identifier":"B6K786","uniquename":"SJAG_04592"}


id: SJAG_04593
data:
  {"cv_annotations":{"biological_process":[{"annotations":[90435],"is_not":false,"summary":null,"term":"GO:0006850"}],"cellular_component":[{"annotations":[90433],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[90434],"is_not":false,"summary":null,"term":"GO:0005743"}],"molecular_function":[{"annotations":[90436],"is_not":false,"summary":null,"term":"GO:0050833"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB09391","GOA:B6K787","UniProtKB/TrEMBL:B6K787","EnsemblGenomes-Gn:SJAG_04593","InterPro:IPR005336"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rix7","uniquename":"SJAG_04599"},{"name":"erp5","uniquename":"SJAG_04598"},{"name":"sid2","uniquename":"SJAG_04597"},{"name":"swc2","uniquename":"SJAG_04596"},{"name":"cfh1","uniquename":"SJAG_04595"},{"name":"mpc2","uniquename":"SJAG_04593"},{"name":"erv46","uniquename":"SJAG_04592"},{"uniquename":"SJAG_04591"},{"name":"slt1","uniquename":"SJAG_04590"},{"name":"uap56","uniquename":"SJAG_04589"},{"name":"fsf1","uniquename":"SJAG_04588"}],"genes_by_uniquename":{"HGNC:24515":null,"SJAG_04593":null,"SPAC24B11.09":null,"YGR243W":null,"YHR162W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03650","interpro_id":"IPR005336","interpro_name":"Mitochondrial pyruvate carrier","interpro_type":"Family","locations":[{"end":105,"score":3.1000001069271474e-38,"start":8}],"model":"PF03650","name":"Mitochondrial pyruvate carriers"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR14154","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":96,"score":2.2999999682582484e-9,"start":9}],"model":"PTHR14154:SF2","name":"UPF0041 BRAIN PROTEIN 44-RELATED"}],"location":{"chromosome_name":"supercont5.3","end_pos":550495,"start_pos":550127,"strand":"reverse"},"name":"mpc2","ortholog_annotations":[{"gene_uniquename":"SJAG_04593","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24515","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04593","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC24B11.09","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04593","ortholog_taxonid":4932,"ortholog_uniquename":"YGR243W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04593","ortholog_taxonid":4932,"ortholog_uniquename":"YGR243W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_04593","ortholog_taxonid":4932,"ortholog_uniquename":"YHR162W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04593","ortholog_taxonid":4932,"ortholog_uniquename":"YHR162W","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial carrier, pyruvate Mpc2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0022857","GO:0005739","GO:0055085"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005737":null,"GO:0005743":null,"GO:0006850":null,"GO:0050833":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04593.1"],"transcripts_by_uniquename":{"SJAG_04593.1":null},"uniprot_identifier":"B6K787","uniquename":"SJAG_04593"}


id: SJAG_04595
data:
  {"cv_annotations":{"biological_process":[{"annotations":[90442],"is_not":false,"summary":null,"term":"GO:0031505"}],"cellular_component":[{"annotations":[90437],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[90438],"is_not":false,"summary":null,"term":"GO:0051286"},{"annotations":[90439],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[90440],"is_not":false,"summary":null,"term":"GO:0044732"},{"annotations":[90441],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB09392","UniProtKB/TrEMBL:B6K788","InterPro:IPR006597","InterPro:IPR011990","EnsemblGenomes-Gn:SJAG_04595"],"deletion_viability":"unknown","disordered_region_coords":[[1,106],[111,112],[292,439],[441,458],[461,471],[501,502],[808,849],[129,140],[154,172],[187,234],[247,247],[263,262],[273,273]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pub3","uniquename":"SJAG_04600"},{"name":"rix7","uniquename":"SJAG_04599"},{"name":"erp5","uniquename":"SJAG_04598"},{"name":"sid2","uniquename":"SJAG_04597"},{"name":"swc2","uniquename":"SJAG_04596"},{"name":"cfh1","uniquename":"SJAG_04595"},{"name":"mpc2","uniquename":"SJAG_04593"},{"name":"erv46","uniquename":"SJAG_04592"},{"uniquename":"SJAG_04591"},{"name":"slt1","uniquename":"SJAG_04590"},{"name":"uap56","uniquename":"SJAG_04589"}],"genes_by_uniquename":{"HGNC:28969":null,"SJAG_04595":null,"SPAC24B11.10c":null,"YDL203C":null,"YER096W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.25.40.10","interpro_id":"IPR011990","interpro_name":"Tetratricopeptide-like helical domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":847,"score":0.0,"start":459}],"model":"4bwrA00","name":"Tetratricopeptide repeat domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08238","interpro_id":"IPR006597","interpro_name":"Sel1-like repeat","interpro_type":"Repeat","locations":[{"end":572,"score":4.400000095367432,"start":536},{"end":605,"score":0.36000001430511475,"start":573},{"end":642,"score":0.0019000000320374966,"start":610},{"end":722,"score":0.0005799999926239252,"start":687},{"end":760,"score":25.0,"start":724},{"end":796,"score":0.000014000000192027073,"start":762}],"model":"PF08238","name":"Sel1 repeat"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR46430","interpro_id":"IPR051726","interpro_name":"Chitin Synthase Regulator","interpro_type":"Family","locations":[{"end":849,"score":0.0,"start":8}],"model":"PTHR46430:SF3","name":"PROTEIN SKT5-RELATED"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00671","interpro_id":"IPR006597","interpro_name":"Sel1-like repeat","interpro_type":"Repeat","locations":[{"end":572,"score":0.00007699999696342275,"start":536},{"end":608,"score":0.005900000222027302,"start":573},{"end":645,"score":0.000750000006519258,"start":609},{"end":686,"score":100.0,"start":649},{"end":723,"score":6.099999723119254e-7,"start":687},{"end":761,"score":0.050999999046325684,"start":724},{"end":797,"score":4.3999999199684225e-9,"start":762}],"model":"SM00671","name":"Sel1-like repeats."},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF81901","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":668,"score":3.609999915730795e-22,"start":555},{"end":804,"score":9.809999693733486e-23,"start":675}],"model":"0048648","name":"HCP-like"}],"location":{"chromosome_name":"supercont5.3","end_pos":548801,"start_pos":546249,"strand":"forward"},"low_complexity_region_coords":[[141,153],[173,186],[235,246],[248,262],[263,272],[274,291]],"name":"cfh1","ortholog_annotations":[{"gene_uniquename":"SJAG_04595","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28969","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04595","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC24B11.10c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04595","ortholog_taxonid":4932,"ortholog_uniquename":"YDL203C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04595","ortholog_taxonid":4932,"ortholog_uniquename":"YDL203C","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_04595","ortholog_taxonid":4932,"ortholog_uniquename":"YER096W","reference_uniquename":"PMID:29761456"}],"product":"SEL1/TPR repeat protein Cfh1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0005829","GO:0005816","GO:0015630","GO:0005634","GO:0071554"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0031505":null,"GO:0032153":null,"GO:0044732":null,"GO:0051286":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04595.1"],"transcripts_by_uniquename":{"SJAG_04595.1":null},"uniprot_identifier":"B6K788","uniquename":"SJAG_04595"}


id: SJAG_04596
data:
  {"coiled_coil_coords":[[63,86]],"cv_annotations":{"biological_process":[{"annotations":[109475],"is_not":false,"summary":null,"term":"GO:0006338"},{"annotations":[109476],"is_not":false,"summary":null,"term":"GO:0045815"}],"cellular_component":[{"annotations":[109473],"is_not":false,"summary":null,"term":"GO:0005730"},{"annotations":[109474],"is_not":false,"summary":null,"term":"GO:0000812"}],"molecular_function":[{"annotations":[109477],"is_not":false,"summary":null,"term":"GO:0016887"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB09393","EnsemblGenomes-Gn:SJAG_04596","InterPro:IPR008895","InterPro:IPR013272","UniProtKB/TrEMBL:B6K789","GOA:B6K789"],"deletion_viability":"unknown","disordered_region_coords":[[1,4],[189,192],[200,204],[206,211],[227,232],[234,240],[255,258]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pab2","uniquename":"SJAG_04601"},{"name":"pub3","uniquename":"SJAG_04600"},{"name":"rix7","uniquename":"SJAG_04599"},{"name":"erp5","uniquename":"SJAG_04598"},{"name":"sid2","uniquename":"SJAG_04597"},{"name":"swc2","uniquename":"SJAG_04596"},{"name":"cfh1","uniquename":"SJAG_04595"},{"name":"mpc2","uniquename":"SJAG_04593"},{"name":"erv46","uniquename":"SJAG_04592"},{"uniquename":"SJAG_04591"},{"name":"slt1","uniquename":"SJAG_04590"}],"genes_by_uniquename":{"HGNC:11644":null,"SJAG_04596":null,"SPBP35G2.13c":null,"YDR485C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF05764","interpro_id":"IPR046757","interpro_name":"Vps72/YL1, N-terminal","interpro_type":"Domain","locations":[{"end":225,"score":1.3999999965049207e-34,"start":5}],"model":"PF05764","name":"YL1 nuclear protein"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08265","interpro_id":"IPR013272","interpro_name":"Vps72/YL1, C-terminal","interpro_type":"Domain","locations":[{"end":295,"score":1.2000000424450263e-6,"start":270}],"model":"PF08265","name":"YL1 nuclear protein C-terminal domain"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR13275","interpro_id":"IPR008895","interpro_name":"Vps72/YL1 family","interpro_type":"Family","locations":[{"end":302,"score":1.5000000090671439e-36,"start":2}],"model":"PTHR13275:SF4","name":"YL-1 PROTEIN TRANSCRIPTION FACTOR-LIKE 1"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00993","interpro_id":"IPR013272","interpro_name":"Vps72/YL1, C-terminal","interpro_type":"Domain","locations":[{"end":297,"score":2.200000039920269e-7,"start":268}],"model":"SM00993","name":"YL1 nuclear protein C-terminal domain"}],"location":{"chromosome_name":"supercont5.3","end_pos":545925,"start_pos":544978,"strand":"forward"},"low_complexity_region_coords":[[38,52],[62,77],[95,109],[192,214]],"name":"swc2","ortholog_annotations":[{"gene_uniquename":"SJAG_04596","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11644","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04596","ortholog_taxonid":4896,"ortholog_uniquename":"SPBP35G2.13c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04596","ortholog_taxonid":4932,"ortholog_uniquename":"YDR485C","reference_uniquename":"PMID:29761456"}],"product":"Swr1 complex histone chaperone module subunit Swc2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005654","GO:0005694","GO:0006351","GO:0016887","GO:0006325","GO:0005634","GO:0005730"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000812":null,"GO:0005730":null,"GO:0006338":null,"GO:0016887":null,"GO:0045815":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04596.1"],"transcripts_by_uniquename":{"SJAG_04596.1":null},"uniprot_identifier":"B6K789","uniquename":"SJAG_04596"}


id: SJAG_04597
data:
  {"cv_annotations":{"biological_process":[{"annotations":[90449],"is_not":false,"summary":null,"term":"GO:0044878"},{"annotations":[90450],"is_not":false,"summary":null,"term":"GO:0140325"},{"annotations":[90451],"is_not":false,"summary":null,"term":"GO:0010971"},{"annotations":[90452],"is_not":false,"summary":null,"term":"GO:1903501"},{"annotations":[90453],"is_not":false,"summary":null,"term":"GO:1903473"},{"annotations":[90454],"is_not":false,"summary":null,"term":"GO:1902846"},{"annotations":[90455],"is_not":false,"summary":null,"term":"GO:1902854"},{"annotations":[90456],"is_not":false,"summary":null,"term":"GO:1905758"},{"annotations":[90457],"is_not":false,"summary":null,"term":"GO:0032956"},{"annotations":[90458],"is_not":false,"summary":null,"term":"GO:0031028"}],"cellular_component":[{"annotations":[90443],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[90444],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[90445],"is_not":false,"summary":null,"term":"GO:0110085"},{"annotations":[90446],"is_not":false,"summary":null,"term":"GO:0120105"},{"annotations":[90447],"is_not":false,"summary":null,"term":"GO:0044732"},{"annotations":[90448],"is_not":false,"summary":null,"term":"GO:0034973"}],"molecular_function":[{"annotations":[90459],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[90460],"is_not":false,"summary":null,"term":"GO:0004674"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_04597","InterPro:IPR017892","GOA:B6K790","InterPro:IPR000961","InterPro:IPR017441","EnsemblGenomes-Tr:EEB09394","InterPro:IPR008271","InterPro:IPR011009","InterPro:IPR000719","UniProtKB/TrEMBL:B6K790"],"deletion_viability":"unknown","disordered_region_coords":[[20,28],[30,41],[50,52],[81,89],[96,97],[101,102],[537,539],[563,576]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pac3","uniquename":"SJAG_04602"},{"name":"pab2","uniquename":"SJAG_04601"},{"name":"pub3","uniquename":"SJAG_04600"},{"name":"rix7","uniquename":"SJAG_04599"},{"name":"erp5","uniquename":"SJAG_04598"},{"name":"sid2","uniquename":"SJAG_04597"},{"name":"swc2","uniquename":"SJAG_04596"},{"name":"cfh1","uniquename":"SJAG_04595"},{"name":"mpc2","uniquename":"SJAG_04593"},{"name":"erv46","uniquename":"SJAG_04592"},{"uniquename":"SJAG_04591"}],"genes_by_uniquename":{"HGNC:17847":null,"HGNC:17848":null,"SJAG_04597":null,"SPAC24B11.11c":null,"YGR092W":null,"YPR111W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.510.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":504,"score":0.0,"start":269}],"model":"1o6lA01","name":"Transferase(Phosphotransferase) domain 1"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.200.20","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":516,"score":0.0,"start":184}],"model":"1o6lA02","name":"Phosphorylase Kinase; domain 1"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00069","interpro_id":"IPR000719","interpro_name":"Protein kinase domain","interpro_type":"Domain","locations":[{"end":485,"score":0.0,"start":186}],"model":"PF00069","name":"Protein kinase domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00433","interpro_id":"IPR017892","interpro_name":"Protein kinase, C-terminal","interpro_type":"Domain","locations":[{"end":556,"score":3.000000106112566e-7,"start":505}],"model":"PF00433","name":"Protein kinase C terminal domain"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00107","interpro_id":"IPR017441","interpro_name":"Protein kinase, ATP binding site","interpro_type":"Binding_site","locations":[{"end":214,"score":0.0,"start":191}],"model":"PS00107","name":"Protein kinases ATP-binding region signature"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00108","interpro_id":"IPR008271","interpro_name":"Serine/threonine-protein kinase, active site","interpro_type":"Active_site","locations":[{"end":316,"score":0.0,"start":304}],"model":"PS00108","name":"Serine/Threonine protein kinases active-site signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50011","interpro_id":"IPR000719","interpro_name":"Protein kinase domain","interpro_type":"Domain","locations":[{"end":485,"score":0.0,"start":185}],"model":"PS50011","name":"Protein kinase domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51285","interpro_id":"IPR000961","interpro_name":"AGC-kinase, C-terminal","interpro_type":"Domain","locations":[{"end":566,"score":0.0,"start":486}],"model":"PS51285","name":"AGC-kinase C-terminal domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR24356","interpro_id":"IPR050236","interpro_name":"Serine/threonine-protein kinases, AGC","interpro_type":"Family","locations":[{"end":560,"score":0.0,"start":113}],"model":"PTHR24356:SF433","name":"SERINE/THREONINE-PROTEIN KINASE"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00133","interpro_id":"IPR000961","interpro_name":"AGC-kinase, C-terminal","interpro_type":"Domain","locations":[{"end":558,"score":3.6000000723512837e-13,"start":486}],"model":"SM00133","name":"Extension to Ser/Thr-type protein kinases"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00220","interpro_id":"IPR000719","interpro_name":"Protein kinase domain","interpro_type":"Domain","locations":[{"end":485,"score":0.0,"start":185}],"model":"SM00220","name":"Serine/Threonine protein kinases, catalytic domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF56112","interpro_id":"IPR011009","interpro_name":"Protein kinase-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":513,"score":0.0,"start":168}],"model":"0035157","name":"Protein kinase-like (PK-like)"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd05600","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":558,"score":0.0,"start":173}],"model":"cd05600","name":"Catalytic domain of Fungal Sid2p-like Protein Serine/Threonine Kinases"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd21776","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":179,"score":2.2792600042786284e-25,"start":101}],"model":"cd21776","name":"Mob-binding domain found in fungal Sid2p-like serine/threonine protein kinases"}],"location":{"chromosome_name":"supercont5.3","end_pos":544118,"start_pos":542373,"strand":"forward"},"name":"sid2","ortholog_annotations":[{"gene_uniquename":"SJAG_04597","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17847","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04597","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17848","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04597","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC24B11.11c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04597","ortholog_taxonid":4932,"ortholog_uniquename":"YGR092W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04597","ortholog_taxonid":4932,"ortholog_uniquename":"YGR092W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_04597","ortholog_taxonid":4932,"ortholog_uniquename":"YPR111W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04597","ortholog_taxonid":4932,"ortholog_uniquename":"YPR111W","reference_uniquename":"PMID:26896847"}],"product":"serine/threonine protein kinase (NDR family) Sid2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0005816","GO:0030036","GO:0044772","GO:0015629","GO:0015630","GO:0005938","GO:0140096","GO:0016301","GO:0000070","GO:0000281","GO:0004672","GO:0023052","GO:0070938"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004674":null,"GO:0005524":null,"GO:0005737":null,"GO:0010971":null,"GO:0031028":null,"GO:0032153":null,"GO:0032956":null,"GO:0034973":null,"GO:0044732":null,"GO:0044878":null,"GO:0110085":null,"GO:0120105":null,"GO:0140325":null,"GO:1902846":null,"GO:1902854":null,"GO:1903473":null,"GO:1903501":null,"GO:1905758":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04597.1"],"transcripts_by_uniquename":{"SJAG_04597.1":null},"uniprot_identifier":"B6K790","uniquename":"SJAG_04597"}


id: SJAG_04598
data:
  {"coiled_coil_coords":[[133,167]],"cv_annotations":{"biological_process":[{"annotations":[100394],"is_not":false,"summary":null,"term":"GO:0006888"},{"annotations":[100395],"is_not":false,"summary":null,"term":"GO:0007030"},{"annotations":[100396],"is_not":false,"summary":null,"term":"GO:0006886"}],"cellular_component":[{"annotations":[100390],"is_not":false,"summary":null,"term":"GO:0030134"},{"annotations":[100391],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[100392],"is_not":false,"summary":null,"term":"GO:0005793"},{"annotations":[100393],"is_not":false,"summary":null,"term":"GO:0005794"}],"molecular_function":[{"annotations":[75762],"is_not":false,"summary":null,"term":"GO:0038024"}]},"dbxrefs":["GOA:B6K791","EnsemblGenomes-Gn:SJAG_04598","InterPro:IPR009038","InterPro:IPR015720","EnsemblGenomes-Tr:EEB09395","UniProtKB/TrEMBL:B6K791"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"coa1","uniquename":"SJAG_04603"},{"name":"pac3","uniquename":"SJAG_04602"},{"name":"pab2","uniquename":"SJAG_04601"},{"name":"pub3","uniquename":"SJAG_04600"},{"name":"rix7","uniquename":"SJAG_04599"},{"name":"erp5","uniquename":"SJAG_04598"},{"name":"sid2","uniquename":"SJAG_04597"},{"name":"swc2","uniquename":"SJAG_04596"},{"name":"cfh1","uniquename":"SJAG_04595"},{"name":"mpc2","uniquename":"SJAG_04593"},{"name":"erv46","uniquename":"SJAG_04592"}],"genes_by_uniquename":{"HGNC:22301":null,"HGNC:24878":null,"SJAG_04598":null,"SPBC16E9.09c":null,"YAR002C-A":null,"YGL002W":null,"YHR110W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01105","interpro_id":"IPR009038","interpro_name":"GOLD domain","interpro_type":"Domain","locations":[{"end":208,"score":4.4999995675755353e-39,"start":19}],"model":"PF01105","name":"emp24/gp25L/p24 family/GOLD"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50866","interpro_id":"IPR009038","interpro_name":"GOLD domain","interpro_type":"Domain","locations":[{"end":124,"score":0.0,"start":29}],"model":"PS50866","name":"GOLD domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR22811","interpro_id":"IPR015720","interpro_name":"Transmembrane emp24 domain-containing protein","interpro_type":"Family","locations":[{"end":208,"score":1.1000000034881845e-29,"start":5}],"model":"PTHR22811:SF159","name":"TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN"},{"dbname":"SMART","evidence":"Smart scan","id":"SM01190","interpro_id":"IPR009038","interpro_name":"GOLD domain","interpro_type":"Domain","locations":[{"end":209,"score":0.0,"start":19}],"model":"SM01190","name":"emp24/gp25L/p24 family/GOLD"}],"location":{"chromosome_name":"supercont5.3","end_pos":541531,"start_pos":540629,"strand":"forward"},"low_complexity_region_coords":[[3,14],[158,170]],"name":"erp5","ortholog_annotations":[{"gene_uniquename":"SJAG_04598","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:22301","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04598","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24878","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04598","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC16E9.09c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04598","ortholog_taxonid":4932,"ortholog_uniquename":"YAR002C-A","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04598","ortholog_taxonid":4932,"ortholog_uniquename":"YAR002C-A","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_04598","ortholog_taxonid":4932,"ortholog_uniquename":"YGL002W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04598","ortholog_taxonid":4932,"ortholog_uniquename":"YGL002W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_04598","ortholog_taxonid":4932,"ortholog_uniquename":"YHR110W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04598","ortholog_taxonid":4932,"ortholog_uniquename":"YHR110W","reference_uniquename":"PMID:26896847"}],"product":"COPII vesicle coat component Erp5/Erp6/Erp1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0031410","GO:0005783","GO:0005794","GO:0016192","GO:0038024"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005783":null,"GO:0005793":null,"GO:0005794":null,"GO:0006886":null,"GO:0006888":null,"GO:0007030":null,"GO:0030134":null,"GO:0038024":null},"tm_domain_coords":[[5,24],[182,204]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04598.1"],"transcripts_by_uniquename":{"SJAG_04598.1":null},"uniprot_identifier":"B6K791","uniquename":"SJAG_04598"}


id: SJAG_04599
data:
  {"cv_annotations":{"biological_process":[{"annotations":[100399],"is_not":false,"summary":null,"term":"GO:0180023"},{"annotations":[100400],"is_not":false,"summary":null,"term":"GO:0042254"}],"cellular_component":[{"annotations":[100397],"is_not":false,"summary":null,"term":"GO:0005730"},{"annotations":[100398],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[100401],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[100402],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[100403],"is_not":false,"summary":null,"term":"GO:1990275"}]},"dbxrefs":["InterPro:IPR003593","InterPro:IPR041569","InterPro:IPR003959","InterPro:IPR027417","UniProtKB/TrEMBL:B6K792","EnsemblGenomes-Gn:SJAG_04599","InterPro:IPR003960","EnsemblGenomes-Tr:EEB09396","GOA:B6K792"],"deletion_viability":"unknown","disordered_region_coords":[[1,8],[41,42],[59,60],[70,71],[74,80],[82,95],[101,108],[115,170],[289,290],[418,419],[421,441],[467,468],[692,692],[736,737],[739,746]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_05335"},{"name":"coa1","uniquename":"SJAG_04603"},{"name":"pac3","uniquename":"SJAG_04602"},{"name":"pab2","uniquename":"SJAG_04601"},{"name":"pub3","uniquename":"SJAG_04600"},{"name":"rix7","uniquename":"SJAG_04599"},{"name":"erp5","uniquename":"SJAG_04598"},{"name":"sid2","uniquename":"SJAG_04597"},{"name":"swc2","uniquename":"SJAG_04596"},{"name":"cfh1","uniquename":"SJAG_04595"},{"name":"mpc2","uniquename":"SJAG_04593"}],"genes_by_uniquename":{"HGNC:8070":null,"SJAG_04599":null,"SPBC16E9.10c":null,"YLL034C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.8.60","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":488,"score":2.3000000784719956e-22,"start":352},{"end":761,"score":0.0,"start":672}],"model":"2zanA02","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.300","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":350,"score":0.0,"start":165},{"end":776,"score":0.0,"start":498}],"model":"6g2zA01","name":"P-loop containing nucleotide triphosphate hydrolases"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00004","interpro_id":"IPR003959","interpro_name":"ATPase, AAA-type, core","interpro_type":"Domain","locations":[{"end":349,"score":6.199344406172991e-42,"start":217},{"end":670,"score":8.700662164992789e-42,"start":541}],"model":"PF00004","name":"ATPase family associated with various cellular activities (AAA)"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF17862","interpro_id":"IPR041569","interpro_name":"AAA ATPase, AAA+ lid domain","interpro_type":"Domain","locations":[{"end":415,"score":1.3999999737279722e-7,"start":374},{"end":727,"score":0.000058000001445179805,"start":693}],"model":"PF17862","name":"AAA+ lid domain"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00674","interpro_id":"IPR003960","interpro_name":"ATPase, AAA-type, conserved site","interpro_type":"Conserved_site","locations":[{"end":339,"score":0.0,"start":321}],"model":"PS00674","name":"AAA-protein family signature"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR23077","interpro_id":"IPR050168","interpro_name":"AAA ATPase domain-containing protein","interpro_type":"Family","locations":[{"end":780,"score":0.0,"start":285}],"model":"PTHR23077:SF198","name":"AAA-FAMILY ATPASE"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00382","interpro_id":"IPR003593","interpro_name":"AAA+ ATPase domain","interpro_type":"Domain","locations":[{"end":353,"score":4.199999904580518e-23,"start":213},{"end":673,"score":5.6999998191134785e-21,"start":537}],"model":"SM00382","name":"ATPases associated with a variety of cellular activities"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52540","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":410,"score":0.0,"start":176},{"end":780,"score":0.0,"start":499}],"model":"0042094","name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd19518","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":349,"score":0.0,"start":181}],"model":"cd19518","name":"first of two ATPase domains of NVL (nuclear VCP-like protein) and similar ATPase domains"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd19530","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":669,"score":0.0,"start":509}],"model":"cd19530","name":"second of two ATPase domains of NVL (nuclear VCP-like protein) and similar ATPase domains"}],"location":{"chromosome_name":"supercont5.3","end_pos":540054,"start_pos":537467,"strand":"forward"},"low_complexity_region_coords":[[612,623]],"name":"rix7","ortholog_annotations":[{"gene_uniquename":"SJAG_04599","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8070","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04599","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC16E9.10c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04599","ortholog_taxonid":4932,"ortholog_uniquename":"YLL034C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04599","ortholog_taxonid":4932,"ortholog_uniquename":"YLL034C","reference_uniquename":"PMID:26896847"}],"product":"ribosome assembly ATPase Rix7","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0065003","GO:0042254","GO:0016887","GO:0005634","GO:0005730"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005524":null,"GO:0005634":null,"GO:0005730":null,"GO:0016887":null,"GO:0042254":null,"GO:0180023":null,"GO:1990275":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04599.1"],"transcripts_by_uniquename":{"SJAG_04599.1":null},"uniprot_identifier":"B6K792","uniquename":"SJAG_04599"}


id: SJAG_04600
data:
  {"cv_annotations":{"biological_process":[{"annotations":[100405],"is_not":false,"summary":null,"term":"GO:0006511"}],"cellular_component":[{"annotations":[100404],"is_not":false,"summary":null,"term":"GO:0005737"}],"molecular_function":[{"annotations":[100406],"is_not":false,"summary":null,"term":"GO:0005543"},{"annotations":[100407],"is_not":false,"summary":null,"term":"GO:0061630"}]},"dbxrefs":["InterPro:IPR024928","InterPro:IPR000569","InterPro:IPR036020","GOA:B6K793","InterPro:IPR000008","InterPro:IPR035892","InterPro:IPR001202","EnsemblGenomes-Gn:SJAG_04600","EnsemblGenomes-Tr:EEB09397","InterPro:IPR035983","UniProtKB/TrEMBL:B6K793"],"deletion_viability":"unknown","disordered_region_coords":[[107,108],[112,113],[252,281],[312,333],[340,340],[371,375],[699,700],[199,213],[141,168],[184,183],[244,243]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"php4","uniquename":"SJAG_04607"},{"uniquename":"SJAG_05335"},{"name":"coa1","uniquename":"SJAG_04603"},{"name":"pac3","uniquename":"SJAG_04602"},{"name":"pab2","uniquename":"SJAG_04601"},{"name":"pub3","uniquename":"SJAG_04600"},{"name":"rix7","uniquename":"SJAG_04599"},{"name":"erp5","uniquename":"SJAG_04598"},{"name":"sid2","uniquename":"SJAG_04597"},{"name":"swc2","uniquename":"SJAG_04596"},{"name":"cfh1","uniquename":"SJAG_04595"}],"genes_by_uniquename":{"HGNC:7727":null,"HGNC:7728":null,"SJAG_04600":null,"SPBC16E9.11c":null,"YER125W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.20.70.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":246,"score":3.700000055773374e-16,"start":214},{"end":320,"score":5.400000061278369e-18,"start":279}],"model":"2zajA01","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.60.40.150","interpro_id":"IPR035892","interpro_name":"C2 domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":132,"score":5.500000017440923e-30,"start":3}],"model":"3pycA00","name":"C2 domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.2160.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":607,"score":0.0,"start":530}],"model":"3olmA02","name":"Hect, E3 ligase catalytic domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.2410.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":761,"score":0.0,"start":642}],"model":"3olmA03","name":"Hect, E3 ligase catalytic domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.90.1750.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":640,"score":0.0,"start":340}],"model":"3olmA01","name":"Hect, E3 ligase catalytic domains"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00168","interpro_id":"IPR000008","interpro_name":"C2 domain","interpro_type":"Domain","locations":[{"end":98,"score":1.5999999740402544e-16,"start":7}],"model":"PF00168","name":"C2 domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00397","interpro_id":"IPR001202","interpro_name":"WW domain","interpro_type":"Domain","locations":[{"end":243,"score":2.6000000374892807e-8,"start":214},{"end":311,"score":6.900000015797048e-10,"start":282},{"end":370,"score":6.100000149444895e-8,"start":341}],"model":"PF00397","name":"WW domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00632","interpro_id":"IPR000569","interpro_name":"HECT domain","interpro_type":"Domain","locations":[{"end":760,"score":0.0,"start":458}],"model":"PF00632","name":"HECT-domain (ubiquitin-transferase)"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF001569","interpro_id":"IPR024928","interpro_name":"E3 ubiquitin-protein ligase, SMURF1 type","interpro_type":"Family","locations":[{"end":172,"score":2.699993855091771e-40,"start":1},{"end":277,"score":5.200000064637848e-27,"start":132},{"end":761,"score":0.0,"start":270}],"model":"PIRSF001569","name":"E3 ubiquitin-protein ligase, SMURF1 type"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS01159","interpro_id":"IPR001202","interpro_name":"WW domain","interpro_type":"Domain","locations":[{"end":243,"score":0.0,"start":218},{"end":311,"score":0.0,"start":286},{"end":370,"score":0.0,"start":345}],"model":"PS01159","name":"WW/rsp5/WWP domain signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50004","interpro_id":"IPR000008","interpro_name":"C2 domain","interpro_type":"Domain","locations":[{"end":106,"score":0.0,"start":1}],"model":"PS50004","name":"C2 domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50020","interpro_id":"IPR001202","interpro_name":"WW domain","interpro_type":"Domain","locations":[{"end":245,"score":0.0,"start":212},{"end":313,"score":0.0,"start":280},{"end":372,"score":0.0,"start":339}],"model":"PS50020","name":"WW/rsp5/WWP domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50237","interpro_id":"IPR000569","interpro_name":"HECT domain","interpro_type":"Domain","locations":[{"end":761,"score":0.0,"start":428}],"model":"PS50237","name":"HECT domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11254","interpro_id":"IPR050409","interpro_name":"E3 ubiquitin-protein ligase","interpro_type":"Family","locations":[{"end":760,"score":0.0,"start":42}],"model":"PTHR11254:SF436","name":"HECT DOMAIN UBIQUITIN-PROTEIN LIGASE"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00119","interpro_id":"IPR000569","interpro_name":"HECT domain","interpro_type":"Domain","locations":[{"end":761,"score":0.0,"start":426}],"model":"SM00119","name":"Domain Homologous to E6-AP Carboxyl Terminus with"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00239","interpro_id":"IPR000008","interpro_name":"C2 domain","interpro_type":"Domain","locations":[{"end":105,"score":7.59999981051676e-17,"start":7}],"model":"SM00239","name":"Protein kinase C conserved region 2 (CalB)"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00456","interpro_id":"IPR001202","interpro_name":"WW domain","interpro_type":"Domain","locations":[{"end":245,"score":3.100000074349185e-12,"start":213},{"end":313,"score":2.099999997029825e-14,"start":281},{"end":372,"score":2.700000054263463e-13,"start":340}],"model":"SM00456","name":"Domain with 2 conserved Trp (W) residues"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF49562","interpro_id":"IPR035892","interpro_name":"C2 domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":133,"score":8.040000137391988e-24,"start":2}],"model":"0053207","name":"C2 domain (Calcium/lipid-binding domain, CaLB)"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF51045","interpro_id":"IPR036020","interpro_name":"WW domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":244,"score":6.54000020371831e-13,"start":205},{"end":315,"score":8.750000100561997e-14,"start":278},{"end":374,"score":6.229999833075664e-14,"start":334}],"model":"0038884","name":"WW domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF56204","interpro_id":"IPR035983","interpro_name":"HECT, E3 ligase catalytic domain","interpro_type":"Homologous_superfamily","locations":[{"end":754,"score":0.0,"start":388}],"model":"0048334","name":"Hect, E3 ligase catalytic domain"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00078","interpro_id":"IPR000569","interpro_name":"HECT domain","interpro_type":"Domain","locations":[{"end":759,"score":0.0,"start":409}],"model":"cd00078","name":""},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00201","interpro_id":"IPR001202","interpro_name":"WW domain","interpro_type":"Domain","locations":[{"end":243,"score":2.9195701412021435e-11,"start":215},{"end":312,"score":8.678940270449853e-13,"start":283},{"end":372,"score":1.1769699798103161e-11,"start":342}],"model":"cd00201","name":""},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd08382","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":131,"score":0.0,"start":7}],"model":"cd08382","name":"C2 domain present in Smad ubiquitination-related factor (Smurf)-like proteins"}],"location":{"chromosome_name":"supercont5.3","end_pos":536425,"start_pos":533884,"strand":"forward"},"low_complexity_region_coords":[[114,121],[169,183],[184,198],[244,251]],"name":"pub3","ortholog_annotations":[{"gene_uniquename":"SJAG_04600","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:7727","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04600","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:7728","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04600","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC16E9.11c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04600","ortholog_taxonid":4932,"ortholog_uniquename":"YER125W","reference_uniquename":"PMID:29761456"}],"product":"HECT-type ubiquitin-protein ligase E3 Pub3","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0030163","GO:0008289","GO:0016746","GO:0019787","GO:0140096"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005543":null,"GO:0005737":null,"GO:0006511":null,"GO:0061630":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04600.1"],"transcripts_by_uniquename":{"SJAG_04600.1":null},"uniprot_identifier":"B6K793","uniquename":"SJAG_04600"}


id: SJAG_04601
data:
  {"coiled_coil_coords":[[10,58]],"cv_annotations":{"biological_process":[{"annotations":[100418],"is_not":false,"summary":null,"term":"GO:0033621"}],"cellular_component":[{"annotations":[100408],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[100409],"is_not":false,"summary":null,"term":"GO:0071920"},{"annotations":[100410],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[100411],"is_not":false,"summary":null,"term":"GO:0033620"},{"annotations":[100412],"is_not":false,"summary":null,"term":"GO:0016604"},{"annotations":[100413],"is_not":false,"summary":null,"term":"GO:1990251"},{"annotations":[100414],"is_not":false,"summary":null,"term":"GO:0140602"},{"annotations":[100415],"is_not":false,"summary":null,"term":"GO:0005730"},{"annotations":[100416],"is_not":false,"summary":null,"term":"GO:0005654"},{"annotations":[100417],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[100419],"is_not":false,"summary":null,"term":"GO:0106222"},{"annotations":[100420],"is_not":false,"summary":null,"term":"GO:0008143"},{"annotations":[100421],"is_not":false,"summary":null,"term":"GO:0140517"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_04601","InterPro:IPR035979","EnsemblGenomes-Tr:EEB09398","UniProtKB/TrEMBL:B6K794","GOA:B6K794","InterPro:IPR012677","InterPro:IPR000504"],"deletion_viability":"unknown","disordered_region_coords":[[10,9],[21,25],[28,50],[52,53],[117,118],[122,125],[130,141],[1,1]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"fmo1","uniquename":"SJAG_04608"},{"name":"php4","uniquename":"SJAG_04607"},{"uniquename":"SJAG_05335"},{"name":"coa1","uniquename":"SJAG_04603"},{"name":"pac3","uniquename":"SJAG_04602"},{"name":"pab2","uniquename":"SJAG_04601"},{"name":"pub3","uniquename":"SJAG_04600"},{"name":"rix7","uniquename":"SJAG_04599"},{"name":"erp5","uniquename":"SJAG_04598"},{"name":"sid2","uniquename":"SJAG_04597"},{"name":"swc2","uniquename":"SJAG_04596"}],"genes_by_uniquename":{"HGNC:8565":null,"SJAG_04601":null,"SPBC16E9.12c":null,"YIR001C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.70.330","interpro_id":"IPR012677","interpro_name":"Nucleotide-binding alpha-beta plait domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":172,"score":2.300000017872926e-32,"start":23}],"model":"6d0yA00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00076","interpro_id":"IPR000504","interpro_name":"RNA recognition motif domain","interpro_type":"Domain","locations":[{"end":129,"score":1.4000000160899195e-12,"start":60}],"model":"PF00076","name":"RNA recognition motif"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50102","interpro_id":"IPR000504","interpro_name":"RNA recognition motif domain","interpro_type":"Domain","locations":[{"end":135,"score":0.0,"start":58}],"model":"PS50102","name":"Eukaryotic RNA Recognition Motif (RRM) profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR23236","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":149,"score":3.4999998994268057e-33,"start":16}],"model":"PTHR23236:SF12","name":"EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00360","interpro_id":"IPR000504","interpro_name":"RNA recognition motif domain","interpro_type":"Domain","locations":[{"end":131,"score":3.099999952110218e-22,"start":59}],"model":"SM00360","name":"RNA recognition motif"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF54928","interpro_id":"IPR035979","interpro_name":"RNA-binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":164,"score":1.7299999753933076e-29,"start":56}],"model":"0047108","name":"RNA-binding domain, RBD"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd12306","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":131,"score":0.0,"start":59}],"model":"cd12306","name":"RNA recognition motif in type II polyadenylate-binding proteins"}],"location":{"chromosome_name":"supercont5.3","end_pos":533180,"start_pos":532601,"strand":"forward"},"low_complexity_region_coords":[[2,9],[142,170]],"name":"pab2","ortholog_annotations":[{"gene_uniquename":"SJAG_04601","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8565","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04601","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC16E9.12c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04601","ortholog_taxonid":4932,"ortholog_uniquename":"YIR001C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04601","ortholog_taxonid":4932,"ortholog_uniquename":"YIR001C","reference_uniquename":"PMID:26896847"}],"product":"nuclear poly(A) binding protein (PABP) Pab2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0060090","GO:0016071","GO:0005694","GO:0005654","GO:0005730"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000785":null,"GO:0005634":null,"GO:0005654":null,"GO:0005730":null,"GO:0005737":null,"GO:0008143":null,"GO:0016604":null,"GO:0033620":null,"GO:0033621":null,"GO:0071920":null,"GO:0106222":null,"GO:0140517":null,"GO:0140602":null,"GO:1990251":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04601.1"],"transcripts_by_uniquename":{"SJAG_04601.1":null},"uniprot_identifier":"B6K794","uniquename":"SJAG_04601"}


id: SJAG_04602
data:
  {"cv_annotations":{"biological_process":[{"annotations":[100458],"is_not":false,"summary":null,"term":"GO:0043248"},{"annotations":[100459],"is_not":false,"summary":null,"term":"GO:0006457"}],"cellular_component":[{"annotations":[100455],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[100456],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[100457],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[100460],"is_not":false,"summary":null,"term":"GO:0044183"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB09399","UniProtKB/TrEMBL:B6K795","EnsemblGenomes-Gn:SJAG_04602"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"apm1","uniquename":"SJAG_04609"},{"name":"fmo1","uniquename":"SJAG_04608"},{"name":"php4","uniquename":"SJAG_04607"},{"uniquename":"SJAG_05335"},{"name":"coa1","uniquename":"SJAG_04603"},{"name":"pac3","uniquename":"SJAG_04602"},{"name":"pab2","uniquename":"SJAG_04601"},{"name":"pub3","uniquename":"SJAG_04600"},{"name":"rix7","uniquename":"SJAG_04599"},{"name":"erp5","uniquename":"SJAG_04598"},{"name":"sid2","uniquename":"SJAG_04597"}],"genes_by_uniquename":{"HGNC:22420":null,"SJAG_04602":null,"SPBC16E9.19":null,"YLR021W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.230.90","interpro_id":"IPR053720","interpro_name":"Proteasome Assembly Chaperone","interpro_type":"Homologous_superfamily","locations":[{"end":135,"score":4.799999807347799e-12,"start":1}],"model":"6jptA00","name":""}],"location":{"chromosome_name":"supercont5.3","end_pos":532254,"start_pos":531612,"strand":"forward"},"low_complexity_region_coords":[[81,92]],"name":"pac3","ortholog_annotations":[{"gene_uniquename":"SJAG_04602","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:22420","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04602","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC16E9.19","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04602","ortholog_taxonid":4932,"ortholog_uniquename":"YLR021W","reference_uniquename":"PMID:29761456"}],"product":"proteasome assembly chaperone Pac3","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0065003","GO:0006457","GO:0051604","GO:0005829","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005737":null,"GO:0005829":null,"GO:0006457":null,"GO:0043248":null,"GO:0044183":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04602.1"],"transcripts_by_uniquename":{"SJAG_04602.1":null},"uniprot_identifier":"B6K795","uniquename":"SJAG_04602"}


id: SJAG_04603
data:
  {"cv_annotations":{"biological_process":[{"annotations":[100381],"is_not":false,"summary":null,"term":"GO:0033617"}],"cellular_component":[{"annotations":[100379],"is_not":false,"summary":null,"term":"GO:0005743"},{"annotations":[100380],"is_not":false,"summary":null,"term":"GO:0005739"}]},"dbxrefs":["InterPro:IPR042432","EnsemblGenomes-Tr:EEB09400","GOA:B6K796","UniProtKB/TrEMBL:B6K796","EnsemblGenomes-Gn:SJAG_04603","InterPro:IPR014807"],"deletion_viability":"unknown","disordered_region_coords":[[1,12],[56,60],[69,73],[117,122]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"nop8","uniquename":"SJAG_04610"},{"name":"apm1","uniquename":"SJAG_04609"},{"name":"fmo1","uniquename":"SJAG_04608"},{"name":"php4","uniquename":"SJAG_04607"},{"uniquename":"SJAG_05335"},{"name":"coa1","uniquename":"SJAG_04603"},{"name":"pac3","uniquename":"SJAG_04602"},{"name":"pab2","uniquename":"SJAG_04601"},{"name":"pub3","uniquename":"SJAG_04600"},{"name":"rix7","uniquename":"SJAG_04599"},{"name":"erp5","uniquename":"SJAG_04598"}],"genes_by_uniquename":{"HGNC:21868":null,"SJAG_04603":null,"SPBC16E9.03c":null,"YIL157C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08695","interpro_id":"IPR014807","interpro_name":"Cytochrome c oxidase assembly factor 1","interpro_type":"Family","locations":[{"end":198,"score":2.3000000153631232e-23,"start":93}],"model":"PF08695","name":"Cytochrome oxidase complex assembly protein 1"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR28523","interpro_id":"IPR042432","interpro_name":"Cytochrome c oxidase assembly factor 1, fungi","interpro_type":"Family","locations":[{"end":201,"score":0.0,"start":12}],"model":"PTHR28523:SF1","name":"CYTOCHROME C OXIDASE ASSEMBLY FACTOR 1"}],"location":{"chromosome_name":"supercont5.3","end_pos":531471,"start_pos":530783,"strand":"reverse"},"low_complexity_region_coords":[[26,55],[56,68],[74,84]],"name":"coa1","ortholog_annotations":[{"gene_uniquename":"SJAG_04603","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:21868","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04603","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC16E9.03c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04603","ortholog_taxonid":4932,"ortholog_uniquename":"YIL157C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04603","ortholog_taxonid":4932,"ortholog_uniquename":"YIL157C","reference_uniquename":"PMID:26896847"}],"product":"cytochrome c oxidase assembly protein Coa1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0065003","GO:0007005","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005739":null,"GO:0005743":null,"GO:0033617":null},"tm_domain_coords":[[87,109]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04603.1"],"transcripts_by_uniquename":{"SJAG_04603.1":null},"uniprot_identifier":"B6K796","uniquename":"SJAG_04603"}


id: SJAG_04607
data:
  {"coiled_coil_coords":[[104,138]],"cv_annotations":{"biological_process":[{"annotations":[100374],"is_not":false,"summary":null,"term":"GO:0006879"},{"annotations":[100375],"is_not":false,"summary":null,"term":"GO:0000122"}],"cellular_component":[{"annotations":[100369],"is_not":false,"summary":null,"term":"GO:0016602"},{"annotations":[100370],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[100371],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[100372],"is_not":false,"summary":null,"term":"GO:0072686"},{"annotations":[100373],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[100376],"is_not":false,"summary":null,"term":"GO:0003714"}]},"dbxrefs":["GOA:B6K798","UniProtKB/TrEMBL:B6K798","InterPro:IPR018287","EnsemblGenomes-Tr:EEB09402","EnsemblGenomes-Gn:SJAG_04607"],"deletion_viability":"unknown","disordered_region_coords":[[68,102],[104,113],[120,128],[139,176],[186,188],[210,233],[236,237],[239,258],[260,262],[294,320],[322,330],[363,369],[373,378],[386,387],[418,423],[427,429],[431,446],[448,449],[452,456],[461,480],[42,50],[1,1],[19,19],[332,340]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ubc7","uniquename":"SJAG_04612"},{"name":"yar1","uniquename":"SJAG_04611"},{"name":"nop8","uniquename":"SJAG_04610"},{"name":"apm1","uniquename":"SJAG_04609"},{"name":"fmo1","uniquename":"SJAG_04608"},{"name":"php4","uniquename":"SJAG_04607"},{"uniquename":"SJAG_05335"},{"name":"coa1","uniquename":"SJAG_04603"},{"name":"pac3","uniquename":"SJAG_04602"},{"name":"pab2","uniquename":"SJAG_04601"},{"name":"pub3","uniquename":"SJAG_04600"}],"genes_by_uniquename":{"SJAG_04607":null,"SPBC16E9.01c":null,"YKL109W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF10297","interpro_id":"IPR018287","interpro_name":"Hap4 transcription factor, heteromerisation domain","interpro_type":"Domain","locations":[{"end":67,"score":0.008299999870359898,"start":52}],"model":"PF10297","name":"Minimal binding motif of Hap4 for binding to Hap2/3/5"}],"location":{"chromosome_name":"supercont5.3","end_pos":527578,"start_pos":526136,"strand":"reverse"},"low_complexity_region_coords":[[2,18],[20,41],[341,362]],"name":"php4","ortholog_annotations":[{"gene_uniquename":"SJAG_04607","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC16E9.01c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04607","ortholog_taxonid":4932,"ortholog_uniquename":"YKL109W","reference_uniquename":"PMID:29761456"}],"product":"CCAAT-binding factor complex repressor Php4","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0006355","GO:0060090","GO:0072686","GO:0015630","GO:0003712","GO:0098771","GO:0005829","GO:0006351"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000122":null,"GO:0003714":null,"GO:0005634":null,"GO:0005737":null,"GO:0005829":null,"GO:0006879":null,"GO:0016602":null,"GO:0072686":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04607.1"],"transcripts_by_uniquename":{"SJAG_04607.1":null},"uniprot_identifier":"B6K798","uniquename":"SJAG_04607"}


id: SJAG_04608
data:
  {"cv_annotations":{"biological_process":[{"annotations":[109170],"is_not":false,"summary":null,"term":"GO:1990748"}],"cellular_component":[{"annotations":[109169],"is_not":false,"summary":null,"term":"GO:0005789"}],"molecular_function":[{"annotations":[109171],"is_not":false,"summary":null,"term":"GO:0071949"},{"annotations":[109172],"is_not":false,"summary":null,"term":"GO:0004499"},{"annotations":[109173],"is_not":false,"summary":null,"term":"GO:0050661"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB09403","EnsemblGenomes-Gn:SJAG_04608","GOA:B6K799","InterPro:IPR020946","InterPro:IPR036188","InterPro:IPR000960","UniProtKB/TrEMBL:B6K799"],"deletion_viability":"unknown","disordered_region_coords":[[69,73],[115,116],[135,136],[149,156],[159,162],[421,424]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tra1","uniquename":"SJAG_04613"},{"name":"ubc7","uniquename":"SJAG_04612"},{"name":"yar1","uniquename":"SJAG_04611"},{"name":"nop8","uniquename":"SJAG_04610"},{"name":"apm1","uniquename":"SJAG_04609"},{"name":"fmo1","uniquename":"SJAG_04608"},{"name":"php4","uniquename":"SJAG_04607"},{"uniquename":"SJAG_05335"},{"name":"coa1","uniquename":"SJAG_04603"},{"name":"pac3","uniquename":"SJAG_04602"},{"name":"pab2","uniquename":"SJAG_04601"}],"genes_by_uniquename":{"HGNC:3769":null,"HGNC:3770":null,"HGNC:3771":null,"HGNC:3772":null,"HGNC:3773":null,"SJAG_04608":null,"SPBP16F5.08c":null,"YHR176W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.50.50.60","interpro_id":"IPR036188","interpro_name":"FAD/NAD(P)-binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":407,"score":0.0,"start":6},{"end":290,"score":0.0,"start":185}],"model":"2gv8A01","name":"FAD/NAD(P)-binding domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00743","interpro_id":"IPR020946","interpro_name":"Flavin monooxygenase-like","interpro_type":"Family","locations":[{"end":237,"score":4.000000014509975e-15,"start":83},{"end":415,"score":2.4000000848900527e-6,"start":274}],"model":"PF00743","name":"Flavin-binding monooxygenase-like"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF13450","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":54,"score":0.001500000013038516,"start":11}],"model":"PF13450","name":"NAD(P)-binding Rossmann-like domain"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF000332","interpro_id":"IPR000960","interpro_name":"Flavin monooxygenase FMO","interpro_type":"Family","locations":[{"end":58,"score":0.0002800000074785203,"start":5},{"end":245,"score":4.0999998698886424e-20,"start":72},{"end":418,"score":2.6999999458432455e-10,"start":255}],"model":"PIRSF000332","name":"Dimethylaniline monooxygenase (N-oxide-forming)"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00370","interpro_id":"IPR000960","interpro_name":"Flavin monooxygenase FMO","interpro_type":"Family","locations":[{"end":23,"score":3.399999969650959e-18,"start":7},{"end":57,"score":3.399999969650959e-18,"start":33},{"end":304,"score":3.399999969650959e-18,"start":277},{"end":359,"score":3.399999969650959e-18,"start":346}],"model":"PR00370","name":""},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR23023","interpro_id":"IPR050346","interpro_name":"Flavin-containing Monooxygenases","interpro_type":"Family","locations":[{"end":423,"score":0.0,"start":262}],"model":"PTHR23023:SF266","name":"DIMETHYLANILINE MONOOXYGENASE"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF51905","interpro_id":"IPR036188","interpro_name":"FAD/NAD(P)-binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":234,"score":1.401298464324817e-45,"start":7},{"end":425,"score":1.1900000203971086e-18,"start":261}],"model":"0052963","name":"FAD/NAD(P)-binding domain"}],"location":{"chromosome_name":"supercont5.3","end_pos":524543,"start_pos":523200,"strand":"reverse"},"low_complexity_region_coords":[[342,359]],"name":"fmo1","ortholog_annotations":[{"gene_uniquename":"SJAG_04608","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3769","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04608","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3770","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04608","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3771","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04608","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3772","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04608","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3773","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04608","ortholog_taxonid":4896,"ortholog_uniquename":"SPBP16F5.08c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04608","ortholog_taxonid":4932,"ortholog_uniquename":"YHR176W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04608","ortholog_taxonid":4932,"ortholog_uniquename":"YHR176W","reference_uniquename":"PMID:26896847"}],"product":"ER flavin-containing N,N-dimethylaniline monooxygenase activity Fmo1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0005783","GO:0016491","GO:0098754","GO:0005789"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004499":null,"GO:0005789":null,"GO:0050661":null,"GO:0071949":null,"GO:1990748":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04608.1"],"transcripts_by_uniquename":{"SJAG_04608.1":null},"uniprot_identifier":"B6K799","uniquename":"SJAG_04608"}


id: SJAG_04609
data:
  {"cv_annotations":{"biological_process":[{"annotations":[109163],"is_not":false,"summary":null,"term":"GO:0099638"},{"annotations":[109164],"is_not":false,"summary":null,"term":"GO:0006895"},{"annotations":[109165],"is_not":false,"summary":null,"term":"GO:0043001"},{"annotations":[109166],"is_not":false,"summary":null,"term":"GO:0042147"},{"annotations":[109167],"is_not":false,"summary":null,"term":"GO:0016192"}],"cellular_component":[{"annotations":[109153],"is_not":false,"summary":null,"term":"GO:0030121"},{"annotations":[109154],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[109155],"is_not":false,"summary":null,"term":"GO:0051286"},{"annotations":[109156],"is_not":false,"summary":null,"term":"GO:0005905"},{"annotations":[109157],"is_not":false,"summary":null,"term":"GO:0030665"},{"annotations":[59071,109158],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[109159],"is_not":false,"summary":null,"term":"GO:0005768"},{"annotations":[109160],"is_not":false,"summary":null,"term":"GO:0005794"},{"annotations":[109161],"is_not":false,"summary":null,"term":"GO:0044732"},{"annotations":[109162],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[109168],"is_not":false,"summary":null,"term":"GO:0035615"}]},"dbxrefs":["GOA:B6K7A0","InterPro:IPR001392","InterPro:IPR028565","InterPro:IPR018240","InterPro:IPR022775","EnsemblGenomes-Gn:SJAG_04609","EnsemblGenomes-Tr:EEB09404","InterPro:IPR011012","InterPro:IPR036168","UniProtKB/TrEMBL:B6K7A0"],"deletion_viability":"unknown","disordered_region_coords":[[324,329]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_05336"},{"name":"tra1","uniquename":"SJAG_04613"},{"name":"ubc7","uniquename":"SJAG_04612"},{"name":"yar1","uniquename":"SJAG_04611"},{"name":"nop8","uniquename":"SJAG_04610"},{"name":"apm1","uniquename":"SJAG_04609"},{"name":"fmo1","uniquename":"SJAG_04608"},{"name":"php4","uniquename":"SJAG_04607"},{"uniquename":"SJAG_05335"},{"name":"coa1","uniquename":"SJAG_04603"},{"name":"pac3","uniquename":"SJAG_04602"}],"genes_by_uniquename":{"HGNC:13667":null,"HGNC:558":null,"SJAG_04609":null,"SPBP16F5.07":null,"YPL259C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.60.40.1170","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":420,"score":0.0,"start":163},{"end":425,"score":0.0,"start":275}],"model":"4en2A01","name":"Mu homology domain, subdomain B"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.450.60","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":142,"score":0.0,"start":1}],"model":"2vglM01","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00928","interpro_id":"IPR028565","interpro_name":"Mu homology domain","interpro_type":"Domain","locations":[{"end":425,"score":0.0,"start":156}],"model":"PF00928","name":"Adaptor complexes medium subunit family"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01217","interpro_id":"IPR022775","interpro_name":"AP complex, mu/sigma subunit","interpro_type":"Domain","locations":[{"end":132,"score":0.017999999225139618,"start":3}],"model":"PF01217","name":"Clathrin adaptor complex small chain"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF005992","interpro_id":"IPR001392","interpro_name":"Clathrin adaptor, mu subunit","interpro_type":"Family","locations":[{"end":426,"score":0.0,"start":1}],"model":"PIRSF005992","name":"Adaptor protein complex, mu subunit"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00314","interpro_id":"IPR001392","interpro_name":"Clathrin adaptor, mu subunit","interpro_type":"Family","locations":[{"end":32,"score":0.0,"start":12},{"end":127,"score":0.0,"start":100},{"end":186,"score":0.0,"start":158},{"end":260,"score":0.0,"start":233},{"end":317,"score":0.0,"start":302},{"end":353,"score":0.0,"start":342}],"model":"PR00314","name":""},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00990","interpro_id":"IPR018240","interpro_name":"Clathrin adaptor, mu subunit, conserved site","interpro_type":"Conserved_site","locations":[{"end":176,"score":0.0,"start":156}],"model":"PS00990","name":"Clathrin adaptor complexes medium chain signature 1"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00991","interpro_id":"IPR018240","interpro_name":"Clathrin adaptor, mu subunit, conserved site","interpro_type":"Conserved_site","locations":[{"end":267,"score":0.0,"start":253}],"model":"PS00991","name":"Clathrin adaptor complexes medium chain signature 2"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51072","interpro_id":"IPR028565","interpro_name":"Mu homology domain","interpro_type":"Domain","locations":[{"end":425,"score":0.0,"start":167}],"model":"PS51072","name":"Mu homology domain (MHD) profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR10529","interpro_id":"IPR050431","interpro_name":"Adaptor complexes medium subunit","interpro_type":"Family","locations":[{"end":419,"score":0.0,"start":1}],"model":"PTHR10529:SF262","name":"AP COMPLEX SUBUNIT MU"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF49447","interpro_id":"IPR036168","interpro_name":"AP-2 complex subunit mu, C-terminal superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":420,"score":0.0,"start":156}],"model":"0038852","name":"Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF64356","interpro_id":"IPR011012","interpro_name":"Longin-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":139,"score":3.890004536965692e-40,"start":1}],"model":"0038304","name":"SNARE-like"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd09250","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":423,"score":0.0,"start":153}],"model":"cd09250","name":"C-terminal domain of medium Mu1 subunit in clathrin-associated adaptor protein (AP) complex AP-1"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd14835","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":142,"score":0.0,"start":3}],"model":"cd14835","name":"AP-1 complex subunit mu N-terminal domain"}],"location":{"chromosome_name":"supercont5.3","end_pos":522796,"start_pos":521287,"strand":"forward"},"name":"apm1","ortholog_annotations":[{"gene_uniquename":"SJAG_04609","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:13667","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04609","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:558","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04609","ortholog_taxonid":4896,"ortholog_uniquename":"SPBP16F5.07","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04609","ortholog_taxonid":4932,"ortholog_uniquename":"YPL259C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04609","ortholog_taxonid":4932,"ortholog_uniquename":"YPL259C","reference_uniquename":"PMID:26896847"}],"product":"AP-1 adaptor complex mu subunit Apm1","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0005829","GO:0005816","GO:0016192","GO:0031410","GO:0005768","GO:0060090","GO:0005634","GO:0005794","GO:0015630"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005768":null,"GO:0005794":null,"GO:0005829":null,"GO:0005905":null,"GO:0006895":null,"GO:0016192":null,"GO:0030121":null,"GO:0030665":null,"GO:0032153":null,"GO:0035615":null,"GO:0042147":null,"GO:0043001":null,"GO:0044732":null,"GO:0051286":null,"GO:0099638":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04609.1"],"transcripts_by_uniquename":{"SJAG_04609.1":null},"uniprot_identifier":"B6K7A0","uniquename":"SJAG_04609"}


id: SJAG_04610
data:
  {"coiled_coil_coords":[[83,107],[467,487]],"cv_annotations":{"biological_process":[{"annotations":[109151],"is_not":false,"summary":null,"term":"GO:0042254"}],"cellular_component":[{"annotations":[109149],"is_not":false,"summary":null,"term":"GO:0005730"},{"annotations":[109150],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[109152],"is_not":false,"summary":null,"term":"GO:0003723"}]},"dbxrefs":["InterPro:IPR012677","EnsemblGenomes-Gn:SJAG_04610","GOA:B6K7A1","InterPro:IPR035979","UniProtKB/TrEMBL:B6K7A1","InterPro:IPR000504","EnsemblGenomes-Tr:EEB09405","InterPro:IPR034138"],"deletion_viability":"unknown","disordered_region_coords":[[108,108],[114,118],[144,147],[152,156],[235,257],[271,283],[288,293],[298,299],[325,339],[342,343],[378,381],[408,410],[414,416],[476,477],[480,481],[305,310]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mcs2","uniquename":"SJAG_04614"},{"uniquename":"SJAG_05336"},{"name":"tra1","uniquename":"SJAG_04613"},{"name":"ubc7","uniquename":"SJAG_04612"},{"name":"yar1","uniquename":"SJAG_04611"},{"name":"nop8","uniquename":"SJAG_04610"},{"name":"apm1","uniquename":"SJAG_04609"},{"name":"fmo1","uniquename":"SJAG_04608"},{"name":"php4","uniquename":"SJAG_04607"},{"uniquename":"SJAG_05335"},{"name":"coa1","uniquename":"SJAG_04603"}],"genes_by_uniquename":{"HGNC:23387":null,"SJAG_04610":null,"SPBP16F5.06":null,"YOL144W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.70.330","interpro_id":"IPR012677","interpro_name":"Nucleotide-binding alpha-beta plait domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":110,"score":1.8000000379103653e-9,"start":1}],"model":"2m2bA00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00076","interpro_id":"IPR000504","interpro_name":"RNA recognition motif domain","interpro_type":"Domain","locations":[{"end":61,"score":0.800000011920929,"start":10}],"model":"PF00076","name":"RNA recognition motif"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50102","interpro_id":"IPR000504","interpro_name":"RNA recognition motif domain","interpro_type":"Domain","locations":[{"end":88,"score":0.0,"start":8}],"model":"PS50102","name":"Eukaryotic RNA Recognition Motif (RRM) profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR48029","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":308,"score":1.8999999327768552e-13,"start":6}],"model":"PTHR48029:SF1","name":"NUCLEOLAR PROTEIN 8"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF54928","interpro_id":"IPR035979","interpro_name":"RNA-binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":102,"score":8.959999964197607e-10,"start":3}],"model":"0042061","name":"RNA-binding domain, RBD"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd12226","interpro_id":"IPR034138","interpro_name":"Nucleolar protein 8, RNA recognition motif","interpro_type":"Domain","locations":[{"end":87,"score":7.425300122551033e-29,"start":9}],"model":"cd12226","name":"RNA recognition motif (RRM) found in nucleolar protein 8 (NOL8) and similar proteins"}],"location":{"chromosome_name":"supercont5.3","end_pos":521040,"start_pos":519326,"strand":"forward"},"low_complexity_region_coords":[[311,324],[384,407]],"name":"nop8","ortholog_annotations":[{"gene_uniquename":"SJAG_04610","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:23387","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04610","ortholog_taxonid":4896,"ortholog_uniquename":"SPBP16F5.06","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04610","ortholog_taxonid":4932,"ortholog_uniquename":"YOL144W","reference_uniquename":"PMID:29761456"}],"product":"ribosome biogenesis RNA-binding protein Nop8","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0042254","GO:0005634","GO:0005730"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003723":null,"GO:0005634":null,"GO:0005730":null,"GO:0042254":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04610.1"],"transcripts_by_uniquename":{"SJAG_04610.1":null},"uniprot_identifier":"B6K7A1","uniquename":"SJAG_04610"}


id: SJAG_04611
data:
  {"cv_annotations":{"biological_process":[{"annotations":[75242],"is_not":false,"summary":null,"term":"GO:0045944"},{"annotations":[109148],"is_not":false,"summary":null,"term":"GO:0042254"}],"cellular_component":[{"annotations":[109145],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[109146],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[109147],"is_not":false,"summary":null,"term":"GO:0030688"}],"molecular_function":[{"annotations":[75243],"is_not":false,"summary":null,"term":"GO:0000976"}]},"dbxrefs":["InterPro:IPR036770","EnsemblGenomes-Gn:SJAG_04611","InterPro:IPR020683","UniProtKB/TrEMBL:B6K7A2","EnsemblGenomes-Tr:EEB09406","InterPro:IPR002110"],"deletion_viability":"unknown","disordered_region_coords":[[55,72],[138,146]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"spo14","uniquename":"SJAG_04615"},{"name":"mcs2","uniquename":"SJAG_04614"},{"uniquename":"SJAG_05336"},{"name":"tra1","uniquename":"SJAG_04613"},{"name":"ubc7","uniquename":"SJAG_04612"},{"name":"yar1","uniquename":"SJAG_04611"},{"name":"nop8","uniquename":"SJAG_04610"},{"name":"apm1","uniquename":"SJAG_04609"},{"name":"fmo1","uniquename":"SJAG_04608"},{"name":"php4","uniquename":"SJAG_04607"},{"uniquename":"SJAG_05335"}],"genes_by_uniquename":{"SJAG_04611":null,"SPBP16F5.05c":null,"YPL239W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.25.40.20","interpro_id":"IPR036770","interpro_name":"Ankyrin repeat-containing domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":129,"score":2.5000000898478246e-37,"start":1}],"model":"4bszB00","name":"Ankyrin repeat-containing domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF12796","interpro_id":"IPR002110","interpro_name":"Ankyrin repeat","interpro_type":"Repeat","locations":[{"end":101,"score":2.0999999824714462e-17,"start":6}],"model":"PF12796","name":"Ankyrin repeats (3 copies)"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR01415","interpro_id":"IPR002110","interpro_name":"Ankyrin repeat","interpro_type":"Repeat","locations":[{"end":51,"score":2.499999993688107e-7,"start":36},{"end":100,"score":2.499999993688107e-7,"start":86}],"model":"PR01415","name":"Ankyrin repeat"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50088","interpro_id":"IPR002110","interpro_name":"Ankyrin repeat","interpro_type":"Repeat","locations":[{"end":56,"score":0.0,"start":35},{"end":102,"score":0.0,"start":70}],"model":"PS50088","name":"Ankyrin repeat profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50297","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":56,"score":0.0,"start":35},{"end":102,"score":0.0,"start":70}],"model":"PS50297","name":"Ankyrin repeat region circular profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR24171","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":126,"score":7.90000020368151e-24,"start":28}],"model":"PTHR24171:SF8","name":"ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00248","interpro_id":"IPR002110","interpro_name":"Ankyrin repeat","interpro_type":"Repeat","locations":[{"end":66,"score":0.000035000000934815034,"start":35},{"end":99,"score":3.199999909497819e-8,"start":70},{"end":132,"score":3100.0,"start":103}],"model":"SM00248","name":"ankyrin repeats"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF48403","interpro_id":"IPR036770","interpro_name":"Ankyrin repeat-containing domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":129,"score":9.330000225188407e-31,"start":6}],"model":"0045715","name":"Ankyrin repeat"}],"location":{"chromosome_name":"supercont5.3","end_pos":518889,"start_pos":518449,"strand":"reverse"},"name":"yar1","ortholog_annotations":[{"gene_uniquename":"SJAG_04611","ortholog_taxonid":4896,"ortholog_uniquename":"SPBP16F5.05c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04611","ortholog_taxonid":4932,"ortholog_uniquename":"YPL239W","reference_uniquename":"PMID:29761456"}],"product":"ribosome biogenesis protein Yar1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0006351","GO:0042254","GO:0030684","GO:0005829","GO:0006355"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000976":null,"GO:0005634":null,"GO:0005829":null,"GO:0030688":null,"GO:0042254":null,"GO:0045944":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04611.1"],"transcripts_by_uniquename":{"SJAG_04611.1":null},"uniprot_identifier":"B6K7A2","uniquename":"SJAG_04611"}


id: SJAG_04612
data:
  {"cv_annotations":{"biological_process":[{"annotations":[109141],"is_not":false,"summary":null,"term":"GO:0036503"},{"annotations":[109142],"is_not":false,"summary":null,"term":"GO:0180027"}],"cellular_component":[{"annotations":[109137],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[109138],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[109139],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[109140],"is_not":false,"summary":null,"term":"GO:0000151"}],"molecular_function":[{"annotations":[109143],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[109144],"is_not":false,"summary":null,"term":"GO:0061631"}]},"dbxrefs":["GOA:B6K7A3","EnsemblGenomes-Gn:SJAG_04612","UniProtKB/TrEMBL:B6K7A3","InterPro:IPR023313","EnsemblGenomes-Tr:EEB09407","InterPro:IPR000608","InterPro:IPR016135"],"deletion_viability":"unknown","disordered_region_coords":[[18,26],[104,109],[139,140]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_04616"},{"name":"spo14","uniquename":"SJAG_04615"},{"name":"mcs2","uniquename":"SJAG_04614"},{"uniquename":"SJAG_05336"},{"name":"tra1","uniquename":"SJAG_04613"},{"name":"ubc7","uniquename":"SJAG_04612"},{"name":"yar1","uniquename":"SJAG_04611"},{"name":"nop8","uniquename":"SJAG_04610"},{"name":"apm1","uniquename":"SJAG_04609"},{"name":"fmo1","uniquename":"SJAG_04608"},{"name":"php4","uniquename":"SJAG_04607"}],"genes_by_uniquename":{"HGNC:12483":null,"SJAG_04612":null,"SPBP16F5.04":null,"YMR022W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.10.110.10","interpro_id":"IPR016135","interpro_name":"Ubiquitin-conjugating enzyme/RWD-like","interpro_type":"Homologous_superfamily","locations":[{"end":166,"score":0.0,"start":1}],"model":"4jquA00","name":"Ubiquitin Conjugating Enzyme"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00179","interpro_id":"IPR000608","interpro_name":"Ubiquitin-conjugating enzyme E2","interpro_type":"Domain","locations":[{"end":158,"score":0.0,"start":9}],"model":"PF00179","name":"Ubiquitin-conjugating enzyme"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00183","interpro_id":"IPR023313","interpro_name":"Ubiquitin-conjugating enzyme, active site","interpro_type":"Active_site","locations":[{"end":94,"score":0.0,"start":79}],"model":"PS00183","name":"Ubiquitin-conjugating (UBC) active site signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50127","interpro_id":"IPR000608","interpro_name":"Ubiquitin-conjugating enzyme E2","interpro_type":"Domain","locations":[{"end":165,"score":0.0,"start":5}],"model":"PS50127","name":"Ubiquitin-conjugating (UBC) core domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR24067","interpro_id":"IPR050113","interpro_name":"Ubiquitin-conjugating enzyme","interpro_type":"Family","locations":[{"end":159,"score":0.0,"start":4}],"model":"PTHR24067:SF154","name":"UBIQUITIN-CONJUGATING ENZYME E2"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00212","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":165,"score":0.0,"start":8}],"model":"SM00212","name":"Ubiquitin-conjugating enzyme E2, catalytic domain homologues"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF54495","interpro_id":"IPR016135","interpro_name":"Ubiquitin-conjugating enzyme/RWD-like","interpro_type":"Homologous_superfamily","locations":[{"end":163,"score":0.0,"start":4}],"model":"0045484","name":"UBC-like"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00195","interpro_id":"IPR000608","interpro_name":"Ubiquitin-conjugating enzyme E2","interpro_type":"Domain","locations":[{"end":160,"score":0.0,"start":8}],"model":"cd00195","name":""}],"location":{"chromosome_name":"supercont5.3","end_pos":518189,"start_pos":517489,"strand":"forward"},"name":"ubc7","ortholog_annotations":[{"gene_uniquename":"SJAG_04612","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12483","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04612","ortholog_taxonid":4896,"ortholog_uniquename":"SPBP16F5.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04612","ortholog_taxonid":4932,"ortholog_uniquename":"YMR022W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04612","ortholog_taxonid":4932,"ortholog_uniquename":"YMR022W","reference_uniquename":"PMID:26896847"}],"product":"Hrd1 ubiquitin ligase complex ubiquitin conjugating enzyme E2 Ubc7","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0005783","GO:0005829","GO:0140096","GO:0016746","GO:0019787","GO:0005634","GO:0030163"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000151":null,"GO:0005524":null,"GO:0005634":null,"GO:0005783":null,"GO:0005829":null,"GO:0036503":null,"GO:0061631":null,"GO:0180027":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04612.1"],"transcripts_by_uniquename":{"SJAG_04612.1":null},"uniprot_identifier":"B6K7A3","uniquename":"SJAG_04612"}


id: SJAG_04613
data:
  {"coiled_coil_coords":[[436,463],[1614,1641]],"cv_annotations":{"biological_process":[{"annotations":[109132],"is_not":false,"summary":null,"term":"GO:0000122"},{"annotations":[109133],"is_not":false,"summary":null,"term":"GO:0006357"},{"annotations":[109134],"is_not":false,"summary":null,"term":"GO:0045815"}],"cellular_component":[{"annotations":[109130],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[109131],"is_not":false,"summary":null,"term":"GO:0000124"}],"molecular_function":[{"annotations":[109135],"is_not":false,"summary":null,"term":"GO:0140463"},{"annotations":[109136],"is_not":false,"summary":null,"term":"GO:0003713"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_04613","GOA:B6K7A4","InterPro:IPR014009","InterPro:IPR033317","UniProtKB/TrEMBL:B6K7A4","InterPro:IPR011009","EnsemblGenomes-Tr:EEB09408","InterPro:IPR003151","InterPro:IPR003152","InterPro:IPR000403","InterPro:IPR016024"],"deletion_viability":"unknown","disordered_region_coords":[[183,186],[481,483],[3056,3060],[3075,3096],[464,467]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_04617"},{"uniquename":"SJAG_04616"},{"name":"spo14","uniquename":"SJAG_04615"},{"name":"mcs2","uniquename":"SJAG_04614"},{"uniquename":"SJAG_05336"},{"name":"tra1","uniquename":"SJAG_04613"},{"name":"ubc7","uniquename":"SJAG_04612"},{"name":"yar1","uniquename":"SJAG_04611"},{"name":"nop8","uniquename":"SJAG_04610"},{"name":"apm1","uniquename":"SJAG_04609"},{"name":"fmo1","uniquename":"SJAG_04608"}],"genes_by_uniquename":{"HGNC:12347":null,"SJAG_04613":null,"SPBP16F5.03c":null,"YHR099W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00454","interpro_id":"IPR000403","interpro_name":"Phosphatidylinositol 3-/4-kinase, catalytic domain","interpro_type":"Domain","locations":[{"end":3568,"score":1.099999972191823e-26,"start":3299}],"model":"PF00454","name":"Phosphatidylinositol 3- and 4-kinase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF02259","interpro_id":"IPR003151","interpro_name":"PIK-related kinase, FAT","interpro_type":"Domain","locations":[{"end":2970,"score":0.0,"start":2622}],"model":"PF02259","name":"FAT domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF02260","interpro_id":"IPR003152","interpro_name":"FATC domain","interpro_type":"Domain","locations":[{"end":3637,"score":0.00022000000171829015,"start":3606}],"model":"PF02260","name":"FATC domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF20175","interpro_id":"IPR046807","interpro_name":"Tra1, HEAT repeat central region","interpro_type":"Repeat","locations":[{"end":878,"score":0.0,"start":266}],"model":"PF20175","name":"Tra1 HEAT repeat central region"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF20206","interpro_id":"IPR046805","interpro_name":"Tra1, HEAT repeat ring region","interpro_type":"Repeat","locations":[{"end":1551,"score":0.0,"start":891},{"end":1929,"score":0.0,"start":1661},{"end":2471,"score":0.0,"start":1936}],"model":"PF20206","name":"Tra1 HEAT repeat ring region"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50290","interpro_id":"IPR000403","interpro_name":"Phosphatidylinositol 3-/4-kinase, catalytic domain","interpro_type":"Domain","locations":[{"end":3608,"score":0.0,"start":3271}],"model":"PS50290","name":"Phosphatidylinositol 3- and 4-kinases catalytic domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51189","interpro_id":"IPR014009","interpro_name":"PIK-related kinase","interpro_type":"Domain","locations":[{"end":3041,"score":0.0,"start":2485}],"model":"PS51189","name":"FAT domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51190","interpro_id":"IPR003152","interpro_name":"FATC domain","interpro_type":"Domain","locations":[{"end":3637,"score":0.0,"start":3605}],"model":"PS51190","name":"FATC domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11139","interpro_id":"IPR050517","interpro_name":"DNA Damage Response and Repair Kinase","interpro_type":"Family","locations":[{"end":3636,"score":0.0,"start":89}],"model":"PTHR11139:SF1","name":"ATAXIA TELANGIECTASIA MUTATED ATM -RELATED"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00146","interpro_id":"IPR000403","interpro_name":"Phosphatidylinositol 3-/4-kinase, catalytic domain","interpro_type":"Domain","locations":[{"end":3620,"score":3.4999999535528142e-19,"start":3300}],"model":"SM00146","name":"Phosphoinositide 3-kinase, catalytic domain"},{"dbname":"SMART","evidence":"Smart scan","id":"SM01343","interpro_id":"IPR003152","interpro_name":"FATC domain","interpro_type":"Domain","locations":[{"end":3637,"score":0.001500000013038516,"start":3605}],"model":"SM01343","name":""},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF48371","interpro_id":"IPR016024","interpro_name":"Armadillo-type fold","interpro_type":"Homologous_superfamily","locations":[{"end":423,"score":1.089999979164702e-9,"start":23},{"end":1149,"score":2.660000042453703e-8,"start":627},{"end":1922,"score":1.6100000221896948e-9,"start":1205},{"end":2316,"score":0.000045500000851461664,"start":1858}],"model":"0049802","name":"ARM repeat"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF56112","interpro_id":"IPR011009","interpro_name":"Protein kinase-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":3572,"score":0.0,"start":3203}],"model":"0046494","name":"Protein kinase-like (PK-like)"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd05163","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":3569,"score":0.0,"start":3267}],"model":"cd05163","name":"Pseudokinase domain of TRansformation/tRanscription domain-Associated Protein"}],"location":{"chromosome_name":"supercont5.3","end_pos":517155,"start_pos":506105,"strand":"reverse"},"low_complexity_region_coords":[[216,228],[411,420],[468,480],[945,954],[1326,1341],[1360,1376],[1448,1459],[1471,1484],[1613,1613]],"name":"tra1","ortholog_annotations":[{"gene_uniquename":"SJAG_04613","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12347","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04613","ortholog_taxonid":4896,"ortholog_uniquename":"SPBP16F5.03c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04613","ortholog_taxonid":4932,"ortholog_uniquename":"YHR099W","reference_uniquename":"PMID:29761456"}],"product":"SAGA complex, phosphatidylinositol pseudokinase subunit Tra1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005694","GO:0006355","GO:0006325","GO:0003713","GO:0060090","GO:0006351","GO:0005634","GO:0003712"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000122":null,"GO:0000124":null,"GO:0003713":null,"GO:0005634":null,"GO:0006357":null,"GO:0045815":null,"GO:0140463":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04613.1"],"transcripts_by_uniquename":{"SJAG_04613.1":null},"uniprot_identifier":"B6K7A4","uniquename":"SJAG_04613"}


id: SJAG_04614
data:
  {"coiled_coil_coords":[[314,315]],"cv_annotations":{"biological_process":[{"annotations":[109125],"is_not":false,"summary":null,"term":"GO:0006357"},{"annotations":[109126],"is_not":false,"summary":null,"term":"GO:0006367"}],"cellular_component":[{"annotations":[109123],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[109124],"is_not":false,"summary":null,"term":"GO:0070985"}],"molecular_function":[{"annotations":[109127],"is_not":false,"summary":null,"term":"GO:0061575"},{"annotations":[109128],"is_not":false,"summary":null,"term":"GO:0043539"},{"annotations":[109129],"is_not":false,"summary":null,"term":"GO:0016251"}]},"dbxrefs":["InterPro:IPR027081","InterPro:IPR031658","GOA:B6K7A6","EnsemblGenomes-Gn:SJAG_04614","EnsemblGenomes-Tr:EEB09410","InterPro:IPR036915","InterPro:IPR006671","UniProtKB/TrEMBL:B6K7A6","InterPro:IPR013763"],"deletion_viability":"unknown","disordered_region_coords":[[28,29],[289,291],[293,297],[316,322],[314,313]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ubr11","uniquename":"SJAG_04619"},{"name":"tca17","uniquename":"SJAG_04618"},{"uniquename":"SJAG_04617"},{"uniquename":"SJAG_04616"},{"name":"spo14","uniquename":"SJAG_04615"},{"name":"mcs2","uniquename":"SJAG_04614"},{"uniquename":"SJAG_05336"},{"name":"tra1","uniquename":"SJAG_04613"},{"name":"ubc7","uniquename":"SJAG_04612"},{"name":"yar1","uniquename":"SJAG_04611"},{"name":"nop8","uniquename":"SJAG_04610"}],"genes_by_uniquename":{"HGNC:1594":null,"SJAG_04614":null,"SPBP16F5.02":null,"YPR025C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.472.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":184,"score":6.700000321506961e-39,"start":15}],"model":"1kxuA01","name":"Cyclin-like"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00134","interpro_id":"IPR006671","interpro_name":"Cyclin, N-terminal","interpro_type":"Domain","locations":[{"end":163,"score":0.0012000000569969416,"start":82}],"model":"PF00134","name":"Cyclin, N-terminal domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF16899","interpro_id":"IPR031658","interpro_name":"Cyclin, C-terminal domain 2","interpro_type":"Domain","locations":[{"end":244,"score":2.399999957884008e-13,"start":168}],"model":"PF16899","name":"Cyclin C-terminal domain"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF028758","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":48,"score":88.0,"start":1},{"end":286,"score":3.79999986555371e-15,"start":29}],"model":"PIRSF028758","name":"Cyclin, C/H/G types"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR10026","interpro_id":"IPR043198","interpro_name":"Cyclin/Cyclin-like subunit Ssn8","interpro_type":"Family","locations":[{"end":301,"score":6.80000010823017e-26,"start":11}],"model":"PTHR10026:SF8","name":"CYCLIN"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00385","interpro_id":"IPR013763","interpro_name":"Cyclin-like domain","interpro_type":"Domain","locations":[{"end":157,"score":1.8000000068241206e-7,"start":75}],"model":"SM00385","name":"domain present in cyclins, TFIIB and Retinoblastoma"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF47954","interpro_id":"IPR036915","interpro_name":"Cyclin-like superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":165,"score":1.4999999445713045e-28,"start":9},{"end":282,"score":8.839999719467219e-20,"start":168}],"model":"0054835","name":"Cyclin-like"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR00569","interpro_id":"IPR027081","interpro_name":"CyclinH/Ccl1","interpro_type":"Family","locations":[{"end":304,"score":0.0,"start":6}],"model":"TIGR00569","name":"cyclin ccl1"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd20524","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":163,"score":0.0,"start":8}],"model":"cd20524","name":"first cyclin box found in cyclin-H (CCNH) and similar proteins"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd20525","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":281,"score":1.2454899833721868e-24,"start":166}],"model":"cd20525","name":"second cyclin box found in cyclin-H (CCNH) and similar proteins"}],"location":{"chromosome_name":"supercont5.3","end_pos":505131,"start_pos":504073,"strand":"forward"},"name":"mcs2","ortholog_annotations":[{"gene_uniquename":"SJAG_04614","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1594","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04614","ortholog_taxonid":4896,"ortholog_uniquename":"SPBP16F5.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04614","ortholog_taxonid":4932,"ortholog_uniquename":"YPR025C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04614","ortholog_taxonid":4932,"ortholog_uniquename":"YPR025C","reference_uniquename":"PMID:26896847"}],"product":"transcription factor TFIIH complex cyclin Mcs2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0005654","GO:0098772","GO:0006351","GO:0006355","GO:0030234","GO:0140223"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0006357":null,"GO:0006367":null,"GO:0016251":null,"GO:0043539":null,"GO:0061575":null,"GO:0070985":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04614.1"],"transcripts_by_uniquename":{"SJAG_04614.1":null},"uniprot_identifier":"B6K7A6","uniquename":"SJAG_04614"}


id: SJAG_04615
data:
  {"cv_annotations":{"biological_process":[{"annotations":[106252],"is_not":false,"summary":null,"term":"GO:0030437"},{"annotations":[106253],"is_not":false,"summary":null,"term":"GO:0031321"},{"annotations":[106254],"is_not":false,"summary":null,"term":"GO:0032120"},{"annotations":[106255],"is_not":false,"summary":null,"term":"GO:0006888"},{"annotations":[106256],"is_not":false,"summary":null,"term":"GO:0003400"}],"cellular_component":[{"annotations":[106248],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[106249],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[106250],"is_not":false,"summary":null,"term":"GO:0005789"},{"annotations":[106251],"is_not":false,"summary":null,"term":"GO:0005886"}],"molecular_function":[{"annotations":[106257],"is_not":false,"summary":null,"term":"GO:0005085"}]},"dbxrefs":["InterPro:IPR036322","InterPro:IPR015943","InterPro:IPR001680","UniProtKB/TrEMBL:B6K7A7","GOA:B6K7A7","EnsemblGenomes-Gn:SJAG_04615","EnsemblGenomes-Tr:EEB09411"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pun1","uniquename":"SJAG_04620"},{"name":"ubr11","uniquename":"SJAG_04619"},{"name":"tca17","uniquename":"SJAG_04618"},{"uniquename":"SJAG_04617"},{"uniquename":"SJAG_04616"},{"name":"spo14","uniquename":"SJAG_04615"},{"name":"mcs2","uniquename":"SJAG_04614"},{"uniquename":"SJAG_05336"},{"name":"tra1","uniquename":"SJAG_04613"},{"name":"ubc7","uniquename":"SJAG_04612"},{"name":"yar1","uniquename":"SJAG_04611"}],"genes_by_uniquename":{"HGNC:9356":null,"SJAG_04615":null,"SPBC3H7.01":null,"YNR026C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.130.10.10","interpro_id":"IPR015943","interpro_name":"WD40/YVTN repeat-like-containing domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":325,"score":0.0,"start":1}],"model":"4h5iB00","name":"YVTN repeat-like/Quinoprotein amine dehydrogenase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00400","interpro_id":"IPR001680","interpro_name":"WD40 repeat","interpro_type":"Repeat","locations":[{"end":317,"score":2.5,"start":284}],"model":"PF00400","name":"WD domain, G-beta repeat"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR23284","interpro_id":"IPR045260","interpro_name":"Guanine nucleotide-exchange factor Sec12-like","interpro_type":"Family","locations":[{"end":355,"score":5.000000015855384e-30,"start":2}],"model":"PTHR23284:SF0","name":"PROLACTIN REGULATORY ELEMENT BINDING PROTEIN"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00320","interpro_id":"IPR001680","interpro_name":"WD40 repeat","interpro_type":"Repeat","locations":[{"end":184,"score":160.0,"start":150},{"end":280,"score":480.0,"start":242},{"end":321,"score":0.00570000009611249,"start":282}],"model":"SM00320","name":"WD40 repeats"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF50978","interpro_id":"IPR036322","interpro_name":"WD40-repeat-containing domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":333,"score":2.1999999973925744e-17,"start":9}],"model":"0049440","name":"WD40 repeat-like"}],"location":{"chromosome_name":"supercont5.3","end_pos":503599,"start_pos":502199,"strand":"reverse"},"low_complexity_region_coords":[[17,33]],"name":"spo14","ortholog_annotations":[{"gene_uniquename":"SJAG_04615","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9356","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04615","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC3H7.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04615","ortholog_taxonid":4932,"ortholog_uniquename":"YNR026C","reference_uniquename":"PMID:29761456"}],"product":"GEF for Sar1, WD repeat protein Spo14","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0061024","GO:0005783","GO:0065003","GO:0098772","GO:0005085","GO:0030437","GO:0030234","GO:0005886","GO:0016192","GO:0005789"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003400":null,"GO:0005085":null,"GO:0005737":null,"GO:0005783":null,"GO:0005789":null,"GO:0005886":null,"GO:0006888":null,"GO:0030437":null,"GO:0031321":null,"GO:0032120":null},"tm_domain_coords":[[344,366]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04615.1"],"transcripts_by_uniquename":{"SJAG_04615.1":null},"uniprot_identifier":"B6K7A7","uniquename":"SJAG_04615"}


id: SJAG_04616
data:
  {"cv_annotations":{"biological_process":[{"annotations":[85348],"is_not":false,"summary":null,"term":"GO:0071805"},{"annotations":[85349],"is_not":false,"summary":null,"term":"GO:1902600"},{"annotations":[85350],"is_not":false,"summary":null,"term":"GO:0035725"},{"annotations":[85351],"is_not":false,"summary":null,"term":"GO:0007035"}],"cellular_component":[{"annotations":[85343],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[85344],"is_not":false,"summary":null,"term":"GO:0005769"},{"annotations":[85345],"is_not":false,"summary":null,"term":"GO:0000329"},{"annotations":[85346],"is_not":false,"summary":null,"term":"GO:0005794"},{"annotations":[85347],"is_not":false,"summary":null,"term":"GO:0005770"}],"molecular_function":[{"annotations":[85352],"is_not":false,"summary":null,"term":"GO:0015386"},{"annotations":[85353],"is_not":false,"summary":null,"term":"GO:0015385"}]},"dbxrefs":["InterPro:IPR004709","InterPro:IPR006153","EnsemblGenomes-Tr:EEB09412","InterPro:IPR018422","UniProtKB/TrEMBL:B6K7A8","EnsemblGenomes-Gn:SJAG_04616","GOA:B6K7A8"],"deletion_viability":"unknown","disordered_region_coords":[[467,478],[503,504],[507,510],[516,520],[577,578]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ain1","uniquename":"SJAG_04621"},{"name":"pun1","uniquename":"SJAG_04620"},{"name":"ubr11","uniquename":"SJAG_04619"},{"name":"tca17","uniquename":"SJAG_04618"},{"uniquename":"SJAG_04617"},{"uniquename":"SJAG_04616"},{"name":"spo14","uniquename":"SJAG_04615"},{"name":"mcs2","uniquename":"SJAG_04614"},{"uniquename":"SJAG_05336"},{"name":"tra1","uniquename":"SJAG_04613"},{"name":"ubc7","uniquename":"SJAG_04612"}],"genes_by_uniquename":{"HGNC:11079":null,"HGNC:17123":null,"HGNC:20653":null,"SJAG_04616":null,"SPAC15A10.06":null,"YDR456W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:6.10.140.1330","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":244,"score":1.7999999681214895e-22,"start":191}],"model":"2mdfA00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00999","interpro_id":"IPR006153","interpro_name":"Cation/H+ exchanger","interpro_type":"Domain","locations":[{"end":454,"score":0.0,"start":74}],"model":"PF00999","name":"Sodium/hydrogen exchanger family"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR01084","interpro_id":"IPR004709","interpro_name":"Na+/H+ exchanger","interpro_type":"Family","locations":[{"end":140,"score":2.00000009162741e-18,"start":129},{"end":157,"score":2.00000009162741e-18,"start":143},{"end":166,"score":2.00000009162741e-18,"start":158},{"end":209,"score":2.00000009162741e-18,"start":199}],"model":"PR01084","name":"Na+/H+ exchanger"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR10110","interpro_id":"IPR018422","interpro_name":"Cation/H+ exchanger, CPA1 family","interpro_type":"Family","locations":[{"end":568,"score":0.0,"start":55}],"model":"PTHR10110:SF191","name":"SODIUM/HYDROGEN EXCHANGER"}],"location":{"chromosome_name":"supercont5.3","end_pos":501659,"start_pos":499424,"strand":"reverse"},"low_complexity_region_coords":[[46,60],[68,70],[408,425],[433,444]],"ortholog_annotations":[{"gene_uniquename":"SJAG_04616","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11079","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04616","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17123","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04616","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20653","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04616","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC15A10.06","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04616","ortholog_taxonid":4932,"ortholog_uniquename":"YDR456W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04616","ortholog_taxonid":4932,"ortholog_uniquename":"YDR456W","reference_uniquename":"PMID:26896847"}],"product":"CPA1 sodium ion/proton antiporter","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0031410","GO:0005794","GO:0005768","GO:0055085","GO:0022857","GO:0005773"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000329":null,"GO:0005737":null,"GO:0005769":null,"GO:0005770":null,"GO:0005794":null,"GO:0007035":null,"GO:0015385":null,"GO:0015386":null,"GO:0035725":null,"GO:0071805":null,"GO:1902600":null},"tm_domain_coords":[[17,39],[63,85],[97,119],[123,145],[158,180],[195,217],[248,263],[283,305],[326,345],[360,382],[403,422],[432,449]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04616.1"],"transcripts_by_uniquename":{"SJAG_04616.1":null},"uniprot_identifier":"B6K7A8","uniquename":"SJAG_04616"}


id: SJAG_04617
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[85354],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[85355],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB09413","EnsemblGenomes-Gn:SJAG_04617","UniProtKB/TrEMBL:B6K7A9"],"deletion_viability":"unknown","disordered_region_coords":[[143,151]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ppk3","uniquename":"SJAG_04622"},{"name":"ain1","uniquename":"SJAG_04621"},{"name":"pun1","uniquename":"SJAG_04620"},{"name":"ubr11","uniquename":"SJAG_04619"},{"name":"tca17","uniquename":"SJAG_04618"},{"uniquename":"SJAG_04617"},{"uniquename":"SJAG_04616"},{"name":"spo14","uniquename":"SJAG_04615"},{"name":"mcs2","uniquename":"SJAG_04614"},{"uniquename":"SJAG_05336"},{"name":"tra1","uniquename":"SJAG_04613"}],"genes_by_uniquename":{"SJAG_04617":null,"SPAC15A10.07":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.3","end_pos":499114,"start_pos":498617,"strand":"reverse"},"ortholog_annotations":[{"gene_uniquename":"SJAG_04617","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC15A10.07","reference_uniquename":"PMID:21511999"}],"product":"Schizosaccharomyces specific protein","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"subset_termids":["GO:0005829","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04617.1"],"transcripts_by_uniquename":{"SJAG_04617.1":null},"uniprot_identifier":"B6K7A9","uniquename":"SJAG_04617"}


id: SJAG_04618
data:
  {"cv_annotations":{"biological_process":[{"annotations":[85380],"is_not":false,"summary":null,"term":"GO:0006888"}],"cellular_component":[{"annotations":[58034],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[85376],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[85377],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[85378],"is_not":false,"summary":null,"term":"GO:1990070"},{"annotations":[85379],"is_not":false,"summary":null,"term":"GO:1990071"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K7B0","EnsemblGenomes-Gn:SJAG_04618","InterPro:IPR011012","EnsemblGenomes-Tr:EEB09414","GOA:B6K7B0","InterPro:IPR006722"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sgo2","uniquename":"SJAG_04623"},{"name":"ppk3","uniquename":"SJAG_04622"},{"name":"ain1","uniquename":"SJAG_04621"},{"name":"pun1","uniquename":"SJAG_04620"},{"name":"ubr11","uniquename":"SJAG_04619"},{"name":"tca17","uniquename":"SJAG_04618"},{"uniquename":"SJAG_04617"},{"uniquename":"SJAG_04616"},{"name":"spo14","uniquename":"SJAG_04615"},{"name":"mcs2","uniquename":"SJAG_04614"},{"uniquename":"SJAG_05336"}],"genes_by_uniquename":{"HGNC:30887":null,"SJAG_04618":null,"SPAC15A10.12c":null,"YEL048C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.450.70","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":144,"score":6.200000019660676e-29,"start":1}],"model":"3pr6A00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF04628","interpro_id":"IPR006722","interpro_name":"Trafficking protein particle complex subunit 2","interpro_type":"Family","locations":[{"end":127,"score":1.5999999936067155e-11,"start":16}],"model":"PF04628","name":"Sedlin, N-terminal conserved region"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12403","interpro_id":"IPR006722","interpro_name":"Trafficking protein particle complex subunit 2","interpro_type":"Family","locations":[{"end":139,"score":2.9999998795923744e-13,"start":10}],"model":"PTHR12403:SF11","name":"TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 2"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF64356","interpro_id":"IPR011012","interpro_name":"Longin-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":145,"score":7.019999790148665e-18,"start":6}],"model":"0038406","name":"SNARE-like"}],"location":{"chromosome_name":"supercont5.3","end_pos":497482,"start_pos":496973,"strand":"reverse"},"name":"tca17","ortholog_annotations":[{"gene_uniquename":"SJAG_04618","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30887","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04618","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC15A10.12c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04618","ortholog_taxonid":4932,"ortholog_uniquename":"YEL048C","reference_uniquename":"PMID:29761456"}],"product":"TRAPP complex subunit 2-like Tca17","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0016192","GO:0005829","GO:0031410","GO:0005794","GO:0005634","GO:0005768"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005737":null,"GO:0005829":null,"GO:0006888":null,"GO:1990070":null,"GO:1990071":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04618.1"],"transcripts_by_uniquename":{"SJAG_04618.1":null},"uniprot_identifier":"B6K7B0","uniquename":"SJAG_04618"}


id: SJAG_04619
data:
  {"cv_annotations":{"biological_process":[{"annotations":[85372],"is_not":false,"summary":null,"term":"GO:0006357"},{"annotations":[85373],"is_not":false,"summary":null,"term":"GO:0071596"}],"cellular_component":[{"annotations":[85369],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[85370],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[85371],"is_not":false,"summary":null,"term":"GO:0000151"}],"molecular_function":[{"annotations":[85374],"is_not":false,"summary":null,"term":"GO:0061630"},{"annotations":[85375],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["GOA:B6K7B1","InterPro:IPR039164","UniProtKB/TrEMBL:B6K7B1","EnsemblGenomes-Gn:SJAG_04619","EnsemblGenomes-Tr:EEB09415","InterPro:IPR003126","InterPro:IPR003769"],"deletion_viability":"unknown","disordered_region_coords":[[1,7],[133,135],[170,178]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"bud6","uniquename":"SJAG_04624"},{"name":"sgo2","uniquename":"SJAG_04623"},{"name":"ppk3","uniquename":"SJAG_04622"},{"name":"ain1","uniquename":"SJAG_04621"},{"name":"pun1","uniquename":"SJAG_04620"},{"name":"ubr11","uniquename":"SJAG_04619"},{"name":"tca17","uniquename":"SJAG_04618"},{"uniquename":"SJAG_04617"},{"uniquename":"SJAG_04616"},{"name":"spo14","uniquename":"SJAG_04615"},{"name":"mcs2","uniquename":"SJAG_04614"}],"genes_by_uniquename":{"HGNC:16808":null,"HGNC:21289":null,"SJAG_04619":null,"SPAC15A10.11":null,"YGR184C":null,"YLR024C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.10.110.30","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":164,"score":1.2000000326942414e-26,"start":94}],"model":"3nisA01","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF02207","interpro_id":"IPR003126","interpro_name":"Zinc finger, UBR-type","interpro_type":"Domain","locations":[{"end":162,"score":4.3999999120670875e-18,"start":93}],"model":"PF02207","name":"Putative zinc finger in N-recognin (UBR box)"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51157","interpro_id":"IPR003126","interpro_name":"Zinc finger, UBR-type","interpro_type":"Domain","locations":[{"end":164,"score":0.0,"start":92}],"model":"PS51157","name":"Zinc finger UBR-type profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR21497","interpro_id":"IPR039164","interpro_name":"E3 ubiquitin-protein ligase UBR1-like","interpro_type":"Family","locations":[{"end":872,"score":0.0,"start":88}],"model":"PTHR21497:SF24","name":"UBIQUITIN LIGASE E3 ALPHA-RELATED"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00396","interpro_id":"IPR003126","interpro_name":"Zinc finger, UBR-type","interpro_type":"Domain","locations":[{"end":163,"score":2.4000000569813472e-32,"start":92}],"model":"SM00396","name":"Putative zinc finger in N-recognin, a recognition component of the N-end rule pathway"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd19673","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":162,"score":5.632860017981677e-36,"start":93}],"model":"cd19673","name":"UBR-box found in ubiquitin-protein ligase E3-alpha-3 (UBR3) and similar proteins"}],"location":{"chromosome_name":"supercont5.3","end_pos":493845,"start_pos":491043,"strand":"forward"},"name":"ubr11","ortholog_annotations":[{"gene_uniquename":"SJAG_04619","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16808","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04619","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:21289","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04619","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC15A10.11","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04619","ortholog_taxonid":4932,"ortholog_uniquename":"YGR184C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04619","ortholog_taxonid":4932,"ortholog_uniquename":"YGR184C","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_04619","ortholog_taxonid":4932,"ortholog_uniquename":"YLR024C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04619","ortholog_taxonid":4932,"ortholog_uniquename":"YLR024C","reference_uniquename":"PMID:26896847"}],"product":"ubiquitin-protein ligase E3 (UBR family) Ubr11","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0140096","GO:0006355","GO:0016746","GO:0019787","GO:0005634","GO:0006351","GO:0030163"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000151":null,"GO:0005634":null,"GO:0005737":null,"GO:0006357":null,"GO:0008270":null,"GO:0061630":null,"GO:0071596":null},"tm_domain_coords":[[864,886]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04619.1"],"transcripts_by_uniquename":{"SJAG_04619.1":null},"uniprot_identifier":"B6K7B1","uniquename":"SJAG_04619"}


id: SJAG_04620
data:
  {"cv_annotations":{"biological_process":[{"annotations":[85368],"is_not":false,"summary":null,"term":"GO:0031505"}],"cellular_component":[{"annotations":[85363],"is_not":false,"summary":null,"term":"GO:0051285"},{"annotations":[85364],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[85365],"is_not":false,"summary":null,"term":"GO:0051286"},{"annotations":[85366],"is_not":false,"summary":null,"term":"GO:0005794"},{"annotations":[85367],"is_not":false,"summary":null,"term":"GO:0044853"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB09416","UniProtKB/TrEMBL:B6K7B2","InterPro:IPR009571","GOA:B6K7B2","EnsemblGenomes-Gn:SJAG_04620"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_04625"},{"name":"bud6","uniquename":"SJAG_04624"},{"name":"sgo2","uniquename":"SJAG_04623"},{"name":"ppk3","uniquename":"SJAG_04622"},{"name":"ain1","uniquename":"SJAG_04621"},{"name":"pun1","uniquename":"SJAG_04620"},{"name":"ubr11","uniquename":"SJAG_04619"},{"name":"tca17","uniquename":"SJAG_04618"},{"uniquename":"SJAG_04617"},{"uniquename":"SJAG_04616"},{"name":"spo14","uniquename":"SJAG_04615"}],"genes_by_uniquename":{"SJAG_04620":null,"SPAC15A10.09c":null,"YLR414C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF06687","interpro_id":"IPR009571","interpro_name":"Membrane protein SUR7/Rim9-like, fungi","interpro_type":"Family","locations":[{"end":224,"score":6.599999835543713e-8,"start":8}],"model":"PF06687","name":"SUR7/PalI family"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR28019","interpro_id":"IPR052413","interpro_name":"SUR7 domain-containing protein","interpro_type":"Family","locations":[{"end":226,"score":1.0999999986962872e-16,"start":110}],"model":"PTHR28019:SF2","name":"CELL MEMBRANE PROTEIN YLR413W-RELATED"}],"location":{"chromosome_name":"supercont5.3","end_pos":489378,"start_pos":488558,"strand":"reverse"},"low_complexity_region_coords":[[44,59]],"name":"pun1","ortholog_annotations":[{"gene_uniquename":"SJAG_04620","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC15A10.09c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04620","ortholog_taxonid":4932,"ortholog_uniquename":"YLR414C","reference_uniquename":"PMID:29761456"}],"product":"plasma membrane anchored protein, claudin family, SUR7 subfamily, predicted membrane sensor Pun1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005886","GO:0005938","GO:0071554","GO:0005794"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005794":null,"GO:0031505":null,"GO:0032153":null,"GO:0044853":null,"GO:0051285":null,"GO:0051286":null},"tm_domain_coords":[[6,28],[133,155],[165,187],[208,230]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04620.1"],"transcripts_by_uniquename":{"SJAG_04620.1":null},"uniprot_identifier":"B6K7B2","uniquename":"SJAG_04620"}


id: SJAG_04621
data:
  {"cv_annotations":{"biological_process":[{"annotations":[85359],"is_not":false,"summary":null,"term":"GO:0051764"},{"annotations":[85360],"is_not":false,"summary":null,"term":"GO:0051017"},{"annotations":[85361],"is_not":false,"summary":null,"term":"GO:0071520"}],"cellular_component":[{"annotations":[85356],"is_not":false,"summary":null,"term":"GO:0032432"},{"annotations":[85357],"is_not":false,"summary":null,"term":"GO:0042995"},{"annotations":[85358],"is_not":false,"summary":null,"term":"GO:0110085"}],"molecular_function":[{"annotations":[76042],"is_not":false,"summary":null,"term":"GO:0003786"},{"annotations":[65156],"is_not":false,"summary":null,"term":"GO:0005509"},{"annotations":[85362],"is_not":false,"summary":null,"term":"GO:0030674"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB09417","InterPro:IPR018247","InterPro:IPR001715","EnsemblGenomes-Gn:SJAG_04621","GOA:B6K7B3","InterPro:IPR036872","UniProtKB/TrEMBL:B6K7B3","InterPro:IPR011992","InterPro:IPR014837","InterPro:IPR001589","InterPro:IPR002048"],"deletion_viability":"unknown","disordered_region_coords":[[1,2],[624,628]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rpl42","uniquename":"SJAG_04626"},{"uniquename":"SJAG_04625"},{"name":"bud6","uniquename":"SJAG_04624"},{"name":"sgo2","uniquename":"SJAG_04623"},{"name":"ppk3","uniquename":"SJAG_04622"},{"name":"ain1","uniquename":"SJAG_04621"},{"name":"pun1","uniquename":"SJAG_04620"},{"name":"ubr11","uniquename":"SJAG_04619"},{"name":"tca17","uniquename":"SJAG_04618"},{"uniquename":"SJAG_04617"},{"uniquename":"SJAG_04616"}],"genes_by_uniquename":{"HGNC:163":null,"HGNC:164":null,"HGNC:166":null,"SJAG_04621":null,"SPAC15A10.08":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.238.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":553,"score":2.2000000779454076e-11,"start":478},{"end":613,"score":4.899999903954667e-17,"start":556}],"model":"2m7lA01","name":"EF-hand"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.418.10","interpro_id":"IPR036872","interpro_name":"CH domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":118,"score":4.4000771779799256e-42,"start":1},{"end":234,"score":2.6064151436441598e-43,"start":119}],"model":"5bvrA01","name":"Calponin-like domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.20.58.60","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":369,"score":1.6000000435923218e-26,"start":245},{"end":477,"score":1.0999999799921056e-9,"start":370}],"model":"1hciA01","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00307","interpro_id":"IPR001715","interpro_name":"Calponin homology domain","interpro_type":"Domain","locations":[{"end":114,"score":4.6999998741124107e-17,"start":10},{"end":230,"score":1.1000000313563908e-23,"start":124}],"model":"PF00307","name":"Calponin homology (CH) domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08726","interpro_id":"IPR014837","interpro_name":"EF-hand, Ca insensitive","interpro_type":"Domain","locations":[{"end":613,"score":0.0013000000035390258,"start":554}],"model":"PF08726","name":"Ca2+ insensitive EF hand"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00018","interpro_id":"IPR018247","interpro_name":"EF-Hand 1, calcium-binding site","interpro_type":"Binding_site","locations":[{"end":509,"score":0.0,"start":497}],"model":"PS00018","name":"EF-hand calcium-binding domain"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00020","interpro_id":"IPR001589","interpro_name":"Actinin-type actin-binding domain, conserved site","interpro_type":"Conserved_site","locations":[{"end":110,"score":0.0,"start":86}],"model":"PS00020","name":"Actinin-type actin-binding domain signature 2"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50021","interpro_id":"IPR001715","interpro_name":"Calponin homology domain","interpro_type":"Domain","locations":[{"end":114,"score":0.0,"start":8},{"end":230,"score":0.0,"start":123}],"model":"PS50021","name":"Calponin homology (CH) domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50222","interpro_id":"IPR002048","interpro_name":"EF-hand domain","interpro_type":"Domain","locations":[{"end":519,"score":0.0,"start":484}],"model":"PS50222","name":"EF-hand calcium-binding domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11915","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":379,"score":0.0,"start":4}],"model":"PTHR11915:SF435","name":"SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00033","interpro_id":"IPR001715","interpro_name":"Calponin homology domain","interpro_type":"Domain","locations":[{"end":112,"score":1.3000000155431645e-23,"start":10},{"end":225,"score":5.800000219836814e-22,"start":125}],"model":"SM00033","name":"Calponin homology domain"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00054","interpro_id":"IPR002048","interpro_name":"EF-hand domain","interpro_type":"Domain","locations":[{"end":516,"score":0.003599999938160181,"start":488}],"model":"SM00054","name":"EF-hand, calcium binding motif"},{"dbname":"SMART","evidence":"Smart scan","id":"SM01184","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":615,"score":2.3000000189311474e-15,"start":554}],"model":"SM01184","name":"Ca2+ insensitive EF hand"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF46966","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":368,"score":1.8699999507539467e-22,"start":248}],"model":"0047168","name":"Spectrin repeat"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF47473","interpro_id":"IPR011992","interpro_name":"EF-hand domain pair","interpro_type":"Homologous_superfamily","locations":[{"end":583,"score":3.0700000376061853e-13,"start":481}],"model":"0045999","name":"EF-hand"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF47576","interpro_id":"IPR036872","interpro_name":"CH domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":227,"score":0.0,"start":4}],"model":"0043370","name":"Calponin-homology domain, CH-domain"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00051","interpro_id":"IPR002048","interpro_name":"EF-hand domain","interpro_type":"Domain","locations":[{"end":549,"score":8.680780183567549e-7,"start":488}],"model":"cd00051","name":""},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd21215","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":113,"score":0.0,"start":6}],"model":"cd21215","name":"first calponin homology (CH) domain found in Schizosaccharomyces pombe alpha-actinin-like protein 1 and similar proteins"}],"location":{"chromosome_name":"supercont5.3","end_pos":488208,"start_pos":486267,"strand":"forward"},"low_complexity_region_coords":[[99,111],[616,623]],"name":"ain1","ortholog_annotations":[{"gene_uniquename":"SJAG_04621","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:163","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04621","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:164","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04621","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:166","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04621","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC15A10.08","reference_uniquename":"PMID:21511999"}],"product":"alpha-actinin","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0060090","GO:0030036","GO:0015629","GO:0003779","GO:0070938","GO:0005938"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003786":null,"GO:0005509":null,"GO:0030674":null,"GO:0032432":null,"GO:0042995":null,"GO:0051017":null,"GO:0051764":null,"GO:0071520":null,"GO:0110085":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04621.1"],"transcripts_by_uniquename":{"SJAG_04621.1":null},"uniprot_identifier":"B6K7B3","uniquename":"SJAG_04621"}


id: SJAG_04622
data:
  {"cv_annotations":{"biological_process":[{"annotations":[85383],"is_not":false,"summary":null,"term":"GO:0006409"}],"cellular_component":[{"annotations":[85381],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[85382],"is_not":false,"summary":null,"term":"GO:0005794"}],"molecular_function":[{"annotations":[85384],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[85385],"is_not":false,"summary":null,"term":"GO:0004672"}]},"dbxrefs":["GOA:B6K7B4","EnsemblGenomes-Tr:EEB09418","InterPro:IPR011989","InterPro:IPR016024","EnsemblGenomes-Gn:SJAG_04622","UniProtKB/TrEMBL:B6K7B4","InterPro:IPR011009","InterPro:IPR000719"],"deletion_viability":"unknown","disordered_region_coords":[[220,221],[532,534],[536,537],[556,565],[588,591],[594,598],[614,615],[618,619],[621,622],[624,631],[633,635]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"hal3","uniquename":"SJAG_04627"},{"name":"rpl42","uniquename":"SJAG_04626"},{"uniquename":"SJAG_04625"},{"name":"bud6","uniquename":"SJAG_04624"},{"name":"sgo2","uniquename":"SJAG_04623"},{"name":"ppk3","uniquename":"SJAG_04622"},{"name":"ain1","uniquename":"SJAG_04621"},{"name":"pun1","uniquename":"SJAG_04620"},{"name":"ubr11","uniquename":"SJAG_04619"},{"name":"tca17","uniquename":"SJAG_04618"},{"uniquename":"SJAG_04617"}],"genes_by_uniquename":{"HGNC:14372":null,"SJAG_04622":null,"SPAC15A10.13":null,"YOR112W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.510.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":228,"score":9.999999682655225e-20,"start":104}],"model":"3vwaA02","name":"Transferase(Phosphotransferase) domain 1"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.25.10.10","interpro_id":"IPR011989","interpro_name":"Armadillo-like helical","interpro_type":"Homologous_superfamily","locations":[{"end":532,"score":5.7000000165185264e-36,"start":257}],"model":"3vwaA03","name":"Leucine-rich Repeat Variant"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.200.20","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":99,"score":1.4000000313023785e-22,"start":10}],"model":"3vwaA01","name":"Phosphorylase Kinase; domain 1"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00069","interpro_id":"IPR000719","interpro_name":"Protein kinase domain","interpro_type":"Domain","locations":[{"end":212,"score":0.00013000000035390258,"start":37}],"model":"PF00069","name":"Protein kinase domain"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50011","interpro_id":"IPR000719","interpro_name":"Protein kinase domain","interpro_type":"Domain","locations":[{"end":291,"score":0.0,"start":22}],"model":"PS50011","name":"Protein kinase domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12984","interpro_id":"IPR051177","interpro_name":"Catalytically Inactive Kinase-Related Protein","interpro_type":"Family","locations":[{"end":624,"score":0.0,"start":18}],"model":"PTHR12984:SF3","name":"SCY1-RELATED S/T PROTEIN KINASE-LIKE"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00220","interpro_id":"IPR000719","interpro_name":"Protein kinase domain","interpro_type":"Domain","locations":[{"end":379,"score":0.0038999998942017555,"start":34}],"model":"SM00220","name":"Serine/Threonine protein kinases, catalytic domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF48371","interpro_id":"IPR016024","interpro_name":"Armadillo-type fold","interpro_type":"Homologous_superfamily","locations":[{"end":529,"score":1.7299999854890323e-21,"start":269}],"model":"0045874","name":"ARM repeat"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF56112","interpro_id":"IPR011009","interpro_name":"Protein kinase-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":211,"score":4.450000084963774e-19,"start":34}],"model":"0048206","name":"Protein kinase-like (PK-like)"}],"location":{"chromosome_name":"supercont5.3","end_pos":485579,"start_pos":483221,"strand":"reverse"},"low_complexity_region_coords":[[553,569]],"name":"ppk3","ortholog_annotations":[{"gene_uniquename":"SJAG_04622","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14372","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04622","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC15A10.13","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04622","ortholog_taxonid":4932,"ortholog_uniquename":"YOR112W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04622","ortholog_taxonid":4932,"ortholog_uniquename":"YOR112W","reference_uniquename":"PMID:26896847"}],"product":"protein kinase domain and HEAT repeat protein Ppk3","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0140096","GO:0006913","GO:0005794","GO:0004672","GO:0016301"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004672":null,"GO:0005524":null,"GO:0005737":null,"GO:0005794":null,"GO:0006409":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04622.1"],"transcripts_by_uniquename":{"SJAG_04622.1":null},"uniprot_identifier":"B6K7B4","uniquename":"SJAG_04622"}


id: SJAG_04623
data:
  {"coiled_coil_coords":[[26,53]],"cv_annotations":{"biological_process":[{"annotations":[85393],"is_not":false,"summary":null,"term":"GO:0045143"},{"annotations":[85394],"is_not":false,"summary":null,"term":"GO:1990758"}],"cellular_component":[{"annotations":[85386],"is_not":false,"summary":null,"term":"GO:0099115"},{"annotations":[85387],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[85388],"is_not":false,"summary":null,"term":"GO:0000776"},{"annotations":[85389],"is_not":false,"summary":null,"term":"GO:0072687"},{"annotations":[85390],"is_not":false,"summary":null,"term":"GO:0072686"},{"annotations":[85391],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[85392],"is_not":false,"summary":null,"term":"GO:0005721"}],"molecular_function":[{"annotations":[85395],"is_not":false,"summary":null,"term":"GO:0140463"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB09419","InterPro:IPR011516","UniProtKB/TrEMBL:B6K7B5","InterPro:IPR011515","GOA:B6K7B5","EnsemblGenomes-Gn:SJAG_04623"],"deletion_viability":"unknown","disordered_region_coords":[[1,5],[8,10],[116,117],[433,497],[247,335],[143,233],[359,419]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ect1","uniquename":"SJAG_04628"},{"name":"hal3","uniquename":"SJAG_04627"},{"name":"rpl42","uniquename":"SJAG_04626"},{"uniquename":"SJAG_04625"},{"name":"bud6","uniquename":"SJAG_04624"},{"name":"sgo2","uniquename":"SJAG_04623"},{"name":"ppk3","uniquename":"SJAG_04622"},{"name":"ain1","uniquename":"SJAG_04621"},{"name":"pun1","uniquename":"SJAG_04620"},{"name":"ubr11","uniquename":"SJAG_04619"},{"name":"tca17","uniquename":"SJAG_04618"}],"genes_by_uniquename":{"HGNC:25088":null,"SJAG_04623":null,"SPAC15A10.15":null,"YOR073W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF07557","interpro_id":"IPR011515","interpro_name":"Shugoshin, C-terminal","interpro_type":"Domain","locations":[{"end":358,"score":0.0017000000225380063,"start":336}],"model":"PF07557","name":"Shugoshin C terminus"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF07558","interpro_id":"IPR011516","interpro_name":"Shugoshin, N-terminal coiled-coil domain","interpro_type":"Domain","locations":[{"end":55,"score":5.699999916508602e-10,"start":11}],"model":"PF07558","name":"Shugoshin N-terminal coiled-coil region"}],"location":{"chromosome_name":"supercont5.3","end_pos":482872,"start_pos":481203,"strand":"reverse"},"low_complexity_region_coords":[[106,125],[234,246],[420,432]],"name":"sgo2","ortholog_annotations":[{"gene_uniquename":"SJAG_04623","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25088","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04623","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC15A10.15","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04623","ortholog_taxonid":4932,"ortholog_uniquename":"YOR073W","reference_uniquename":"PMID:29761456"}],"product":"centromeric adaptor, shugoshin Sgo2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0140013","GO:0005634","GO:0005694","GO:0072686","GO:0060090","GO:0015630","GO:0000776","GO:0000070"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000776":null,"GO:0005634":null,"GO:0005721":null,"GO:0005737":null,"GO:0045143":null,"GO:0072686":null,"GO:0072687":null,"GO:0099115":null,"GO:0140463":null,"GO:1990758":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04623.1"],"transcripts_by_uniquename":{"SJAG_04623.1":null},"uniprot_identifier":"B6K7B5","uniquename":"SJAG_04623"}


id: SJAG_04624
data:
  {"coiled_coil_coords":[[500,520],[645,665],[674,694]],"cv_annotations":{"biological_process":[{"annotations":[85400],"is_not":false,"summary":null,"term":"GO:0045010"},{"annotations":[85401],"is_not":false,"summary":null,"term":"GO:0030010"}],"cellular_component":[{"annotations":[85396],"is_not":false,"summary":null,"term":"GO:0030478"},{"annotations":[85397],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[85398],"is_not":false,"summary":null,"term":"GO:0051286"},{"annotations":[85399],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[115288],"is_not":false,"summary":null,"term":"GO:0035838"},{"annotations":[115289],"is_not":false,"summary":null,"term":"GO:0001411"}]},"dbxrefs":["GOA:B6K7B6","EnsemblGenomes-Tr:EEB09420","UniProtKB/TrEMBL:B6K7B6","InterPro:IPR005613","InterPro:IPR022782","EnsemblGenomes-Gn:SJAG_04624"],"deletion_viability":"unknown","disordered_region_coords":[[1,20],[22,23],[26,31],[34,57],[141,143],[209,221],[363,401],[413,418],[420,421],[428,431],[440,444],[455,457],[468,502],[518,523],[525,535],[766,768],[948,1006],[179,201],[234,275],[282,352],[821,884],[924,929]],"feature_publications":[{"reference_uniquename":"PMID:30726171","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"vps29","uniquename":"SJAG_04629"},{"name":"ect1","uniquename":"SJAG_04628"},{"name":"hal3","uniquename":"SJAG_04627"},{"name":"rpl42","uniquename":"SJAG_04626"},{"uniquename":"SJAG_04625"},{"name":"bud6","uniquename":"SJAG_04624"},{"name":"sgo2","uniquename":"SJAG_04623"},{"name":"ppk3","uniquename":"SJAG_04622"},{"name":"ain1","uniquename":"SJAG_04621"},{"name":"pun1","uniquename":"SJAG_04620"},{"name":"ubr11","uniquename":"SJAG_04619"}],"genes_by_uniquename":{"HGNC:25428":null,"HGNC:29506":null,"SJAG_04624":null,"SPAC15A10.16":null,"YLR319C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.20.58.1540","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":730,"score":1.1000000126281123e-36,"start":591}],"model":"3okqA00","name":"Actin interacting protein 3, C-terminal domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03915","interpro_id":"IPR022782","interpro_name":"Actin interacting protein 3-like, C-terminal","interpro_type":"Domain","locations":[{"end":816,"score":0.0,"start":403}],"model":"PF03915","name":"Actin interacting protein 3"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR22741","interpro_id":"IPR051825","interpro_name":"SRC Kinase Signaling Inhibitor","interpro_type":"Family","locations":[{"end":931,"score":0.0,"start":489}],"model":"PTHR22741:SF10","name":"P140CAP/SNIP-RELATED"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00806","interpro_id":"IPR005613","interpro_name":"Actin interacting protein 3, C-terminal","interpro_type":"Domain","locations":[{"end":816,"score":0.0,"start":403}],"model":"SM00806","name":"Actin interacting protein 3"}],"location":{"chromosome_name":"supercont5.3","end_pos":480835,"start_pos":477806,"strand":"reverse"},"low_complexity_region_coords":[[202,208],[276,281],[353,362],[475,499],[646,657],[760,774],[885,923],[930,947]],"name":"bud6","ortholog_annotations":[{"gene_uniquename":"SJAG_04624","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25428","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04624","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:29506","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04624","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC15A10.16","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04624","ortholog_taxonid":4932,"ortholog_uniquename":"YLR319C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04624","ortholog_taxonid":4932,"ortholog_uniquename":"YLR319C","reference_uniquename":"PMID:26896847"}],"product":"actin nucleation-promoting factor Bud6/Aip3","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null,"PMID:30726171":null},"subset_termids":["GO:0015629","GO:0007163","GO:0030036","GO:0005938"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0001411":null,"GO:0005737":null,"GO:0030010":null,"GO:0030478":null,"GO:0032153":null,"GO:0035838":null,"GO:0045010":null,"GO:0051286":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04624.1"],"transcripts_by_uniquename":{"SJAG_04624.1":null},"uniprot_identifier":"B6K7B6","uniquename":"SJAG_04624"}


id: SJAG_04625
data:
  {"cv_annotations":{},"dbxrefs":["EnsemblGenomes-Gn:SJAG_04625","GOA:B6K7B7","UniProtKB/TrEMBL:B6K7B7","InterPro:IPR013879","EnsemblGenomes-Tr:EEB09421"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_04630"},{"name":"vps29","uniquename":"SJAG_04629"},{"name":"ect1","uniquename":"SJAG_04628"},{"name":"hal3","uniquename":"SJAG_04627"},{"name":"rpl42","uniquename":"SJAG_04626"},{"uniquename":"SJAG_04625"},{"name":"bud6","uniquename":"SJAG_04624"},{"name":"sgo2","uniquename":"SJAG_04623"},{"name":"ppk3","uniquename":"SJAG_04622"},{"name":"ain1","uniquename":"SJAG_04621"},{"name":"pun1","uniquename":"SJAG_04620"}],"genes_by_uniquename":{"SJAG_04625":null,"SPAC15E1.02c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08570","interpro_id":"IPR013879","interpro_name":"Protein of unknown function DUF1761","interpro_type":"Family","locations":[{"end":141,"score":8.699999824884242e-25,"start":14}],"model":"PF08570","name":"Protein of unknown function (DUF1761)"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR40638","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":148,"score":0.0,"start":1}],"model":"PTHR40638:SF1","name":"UPF0591 MEMBRANE PROTEIN C15E1.02C"}],"location":{"chromosome_name":"supercont5.3","end_pos":477472,"start_pos":476899,"strand":"forward"},"low_complexity_region_coords":[[147,149],[143,142]],"ortholog_annotations":[{"gene_uniquename":"SJAG_04625","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC15E1.02c","reference_uniquename":"PMID:21511999"}],"product":"DUF1761 family protein","references_by_uniquename":{"PMID:21511999":null},"taxonid":4897,"taxonomic_distribution":"other","tm_domain_coords":[[15,34],[84,106],[121,143]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04625.1"],"transcripts_by_uniquename":{"SJAG_04625.1":null},"uniprot_identifier":"B6K7B7","uniquename":"SJAG_04625"}


id: SJAG_04626
data:
  {"cv_annotations":{"biological_process":[{"annotations":[85404],"is_not":false,"summary":null,"term":"GO:0002181"}],"cellular_component":[{"annotations":[85402],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[85403],"is_not":false,"summary":null,"term":"GO:0022625"}],"molecular_function":[{"annotations":[85405],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_04626","InterPro:IPR011332","UniProtKB/TrEMBL:B6K7B8","InterPro:IPR000552","GOA:B6K7B8","EnsemblGenomes-Tr:EEB09422"],"deletion_viability":"unknown","disordered_region_coords":[[23,24],[28,31],[33,52],[54,56]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"naa10","uniquename":"SJAG_04631"},{"uniquename":"SJAG_04630"},{"name":"vps29","uniquename":"SJAG_04629"},{"name":"ect1","uniquename":"SJAG_04628"},{"name":"hal3","uniquename":"SJAG_04627"},{"name":"rpl42","uniquename":"SJAG_04626"},{"uniquename":"SJAG_04625"},{"name":"bud6","uniquename":"SJAG_04624"},{"name":"sgo2","uniquename":"SJAG_04623"},{"name":"ppk3","uniquename":"SJAG_04622"},{"name":"ain1","uniquename":"SJAG_04621"}],"genes_by_uniquename":{"HGNC:10346":null,"HGNC:10359":null,"SJAG_04626":null,"SPAC15E1.03":null,"YHR141C":null,"YNL162W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.10.450.80","interpro_id":"IPR053708","interpro_name":"Eukaryotic Ribosomal Large Subunit eL42","interpro_type":"Homologous_superfamily","locations":[{"end":106,"score":0.0,"start":1}],"model":"3o58f00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00935","interpro_id":"IPR000552","interpro_name":"Large ribosomal subunit protein eL42","interpro_type":"Family","locations":[{"end":94,"score":2.6000000082448e-29,"start":19}],"model":"PF00935","name":"Ribosomal protein L44"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS01172","interpro_id":"IPR000552","interpro_name":"Large ribosomal subunit protein eL42","interpro_type":"Family","locations":[{"end":74,"score":0.0,"start":63}],"model":"PS01172","name":"Ribosomal protein L44e signature"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR10369","interpro_id":"IPR000552","interpro_name":"Large ribosomal subunit protein eL42","interpro_type":"Family","locations":[{"end":106,"score":0.0,"start":1}],"model":"PTHR10369:SF3","name":"60S RIBOSOMAL PROTEIN L36A/L44"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF57829","interpro_id":"IPR011332","interpro_name":"Zinc-binding ribosomal protein","interpro_type":"Homologous_superfamily","locations":[{"end":94,"score":5.86000005096738e-34,"start":2}],"model":"0037554","name":"Zn-binding ribosomal proteins"}],"location":{"chromosome_name":"supercont5.3","end_pos":476491,"start_pos":476110,"strand":"reverse"},"name":"rpl42","ortholog_annotations":[{"gene_uniquename":"SJAG_04626","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10346","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04626","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10359","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04626","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC15E1.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04626","ortholog_taxonid":4932,"ortholog_uniquename":"YHR141C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04626","ortholog_taxonid":4932,"ortholog_uniquename":"YNL162W","reference_uniquename":"PMID:29761456"}],"product":"60S ribosomal protein L36/L42","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005198","GO:0005829","GO:0022626","GO:0002181"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002181":null,"GO:0003735":null,"GO:0005829":null,"GO:0022625":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04626.1"],"transcripts_by_uniquename":{"SJAG_04626.1":null},"uniprot_identifier":"B6K7B8","uniquename":"SJAG_04626"}


id: SJAG_04627
data:
  {"cv_annotations":{"biological_process":[{"annotations":[85408],"is_not":false,"summary":null,"term":"GO:0015937"},{"annotations":[85409],"is_not":false,"summary":null,"term":"GO:0006231"},{"annotations":[85410],"is_not":false,"summary":null,"term":"GO:0006235"}],"cellular_component":[{"annotations":[85406],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[85407],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[85411],"is_not":false,"summary":null,"term":"GO:0010181"},{"annotations":[85412],"is_not":false,"summary":null,"term":"GO:0004633"},{"annotations":[85413],"is_not":false,"summary":null,"term":"GO:0004864"},{"annotations":[85414],"is_not":false,"summary":null,"term":"GO:0004799"}]},"dbxrefs":["InterPro:IPR003382","EnsemblGenomes-Tr:EEB09423","InterPro:IPR036926","UniProtKB/TrEMBL:B6K7B9","EnsemblGenomes-Gn:SJAG_04627","InterPro:IPR023451","InterPro:IPR036551","GOA:B6K7B9","InterPro:IPR020940","InterPro:IPR000398"],"deletion_viability":"unknown","disordered_region_coords":[[18,20],[234,238],[246,319],[345,348],[214,216]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"grx2","uniquename":"SJAG_04632"},{"name":"naa10","uniquename":"SJAG_04631"},{"uniquename":"SJAG_04630"},{"name":"vps29","uniquename":"SJAG_04629"},{"name":"ect1","uniquename":"SJAG_04628"},{"name":"hal3","uniquename":"SJAG_04627"},{"name":"rpl42","uniquename":"SJAG_04626"},{"uniquename":"SJAG_04625"},{"name":"bud6","uniquename":"SJAG_04624"},{"name":"sgo2","uniquename":"SJAG_04623"},{"name":"ppk3","uniquename":"SJAG_04622"}],"genes_by_uniquename":{"HGNC:12441":null,"SJAG_04627":null,"SPAC15E1.04":null,"YKL088W":null,"YKR072C":null,"YOR054C":null,"YOR074C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.572.10","interpro_id":"IPR036926","interpro_name":"Thymidylate synthase/dCMP hydroxymethylase superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":619,"score":0.0,"start":310}],"model":"2aazI00","name":"Thymidylate synthase/dCMP hydroxymethylase domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.1950","interpro_id":"IPR036551","interpro_name":"Flavin prenyltransferase-like","interpro_type":"Homologous_superfamily","locations":[{"end":217,"score":0.0,"start":11}],"model":"1qzuA00","name":"Flavin prenyltransferase-like"},{"dbname":"HAMAP","evidence":"PrfScan","id":"MF_00008","interpro_id":"IPR000398","interpro_name":"Thymidylate synthase","interpro_type":"Family","locations":[{"end":619,"score":0.0,"start":324}],"model":"MF_00008","name":"Thymidylate synthase [thyA]"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00303","interpro_id":"IPR023451","interpro_name":"Thymidylate synthase/dCMP hydroxymethylase domain","interpro_type":"Domain","locations":[{"end":619,"score":0.0,"start":325}],"model":"PF00303","name":"Thymidylate synthase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF02441","interpro_id":"IPR003382","interpro_name":"Flavoprotein","interpro_type":"Domain","locations":[{"end":208,"score":3.899999861903923e-30,"start":30}],"model":"PF02441","name":"Flavoprotein"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00108","interpro_id":"IPR000398","interpro_name":"Thymidylate synthase","interpro_type":"Family","locations":[{"end":388,"score":0.0,"start":367},{"end":479,"score":0.0,"start":460},{"end":501,"score":0.0,"start":486},{"end":537,"score":0.0,"start":511},{"end":566,"score":0.0,"start":549}],"model":"PR00108","name":""},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00091","interpro_id":"IPR020940","interpro_name":"Thymidylate synthase, active site","interpro_type":"Active_site","locations":[{"end":499,"score":0.0,"start":471}],"model":"PS00091","name":"Thymidylate synthase active site"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11548","interpro_id":"IPR045097","interpro_name":"Thymidylate synthase/dCMP hydroxymethylase","interpro_type":"Family","locations":[{"end":619,"score":0.0,"start":278}],"model":"PTHR11548:SF2","name":"THYMIDYLATE SYNTHASE 1"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52507","interpro_id":"IPR036551","interpro_name":"Flavin prenyltransferase-like","interpro_type":"Homologous_superfamily","locations":[{"end":208,"score":0.0,"start":27}],"model":"0043058","name":"Homo-oligomeric flavin-containing Cys decarboxylases, HFCD"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF55831","interpro_id":"IPR036926","interpro_name":"Thymidylate synthase/dCMP hydroxymethylase superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":619,"score":0.0,"start":314}],"model":"0043052","name":"Thymidylate synthase/dCMP hydroxymethylase"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR03284","interpro_id":"IPR000398","interpro_name":"Thymidylate synthase","interpro_type":"Family","locations":[{"end":619,"score":0.0,"start":325}],"model":"TIGR03284","name":"thymidylate synthase"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00351","interpro_id":"IPR023451","interpro_name":"Thymidylate synthase/dCMP hydroxymethylase domain","interpro_type":"Domain","locations":[{"end":569,"score":0.0,"start":326}],"model":"cd00351","name":""}],"location":{"chromosome_name":"supercont5.3","end_pos":475683,"start_pos":473824,"strand":"reverse"},"low_complexity_region_coords":[[217,233],[361,372]],"name":"hal3","ortholog_annotations":[{"gene_uniquename":"SJAG_04627","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12441","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04627","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC15E1.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04627","ortholog_taxonid":4932,"ortholog_uniquename":"YKL088W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04627","ortholog_taxonid":4932,"ortholog_uniquename":"YKR072C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04627","ortholog_taxonid":4932,"ortholog_uniquename":"YOR054C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04627","ortholog_taxonid":4932,"ortholog_uniquename":"YOR074C","reference_uniquename":"PMID:29761456"}],"product":"thymidylate synthase / phosphopantothenoylcysteine decarboxylase / protein phosphatase inhibitor moonlighting protein Hal3/Tds1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0030234","GO:0098772","GO:0016741","GO:0005739","GO:0055086","GO:0016829","GO:0006790","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004633":null,"GO:0004799":null,"GO:0004864":null,"GO:0005739":null,"GO:0005829":null,"GO:0006231":null,"GO:0006235":null,"GO:0010181":null,"GO:0015937":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04627.1"],"transcripts_by_uniquename":{"SJAG_04627.1":null},"uniprot_identifier":"B6K7B9","uniquename":"SJAG_04627"}


id: SJAG_04628
data:
  {"cv_annotations":{"biological_process":[{"annotations":[85417],"is_not":false,"summary":null,"term":"GO:0006646"}],"cellular_component":[{"annotations":[85415],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[85416],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[85418],"is_not":false,"summary":null,"term":"GO:0004306"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB09424","GOA:B6K7C0","InterPro:IPR004821","InterPro:IPR041723","UniProtKB/TrEMBL:B6K7C0","EnsemblGenomes-Gn:SJAG_04628","InterPro:IPR014729"],"deletion_viability":"unknown","disordered_region_coords":[[298,313],[315,318],[322,323]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_04633"},{"name":"grx2","uniquename":"SJAG_04632"},{"name":"naa10","uniquename":"SJAG_04631"},{"uniquename":"SJAG_04630"},{"name":"vps29","uniquename":"SJAG_04629"},{"name":"ect1","uniquename":"SJAG_04628"},{"name":"hal3","uniquename":"SJAG_04627"},{"name":"rpl42","uniquename":"SJAG_04626"},{"uniquename":"SJAG_04625"},{"name":"bud6","uniquename":"SJAG_04624"},{"name":"sgo2","uniquename":"SJAG_04623"}],"genes_by_uniquename":{"HGNC:8756":null,"SJAG_04628":null,"SPAC15E1.05c":null,"YGR007W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.620","interpro_id":"IPR014729","interpro_name":"Rossmann-like alpha/beta/alpha sandwich fold","interpro_type":"Homologous_superfamily","locations":[{"end":161,"score":0.0,"start":1},{"end":348,"score":1.3999999839026675e-15,"start":180}],"model":"4mvcB00","name":"HUPs"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01467","interpro_id":"IPR004821","interpro_name":"Cytidyltransferase-like domain","interpro_type":"Domain","locations":[{"end":130,"score":3.399999892102777e-21,"start":6},{"end":269,"score":0.7699999809265137,"start":202}],"model":"PF01467","name":"Cytidylyltransferase-like"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR45780","interpro_id":"IPR044608","interpro_name":"Ethanolamine-phosphate cytidylyltransferase","interpro_type":"Family","locations":[{"end":341,"score":0.0,"start":2}],"model":"PTHR45780:SF2","name":"ETHANOLAMINE-PHOSPHATE CYTIDYLYLTRANSFERASE"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52374","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":132,"score":1.020000000827086e-26,"start":1},{"end":269,"score":3.4899999263870995e-6,"start":199}],"model":"0036094","name":"Nucleotidylyl transferase"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR00125","interpro_id":"IPR004821","interpro_name":"Cytidyltransferase-like domain","interpro_type":"Domain","locations":[{"end":67,"score":1.4999999853326784e-10,"start":7}],"model":"TIGR00125","name":"cytidyltransferase-like domain"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd02174","interpro_id":"IPR041723","interpro_name":"CTP:phosphocholine cytidylyltransferase domain","interpro_type":"Domain","locations":[{"end":141,"score":0.0,"start":3}],"model":"cd02174","name":"CTP:phosphocholine cytidylyltransferase"}],"location":{"chromosome_name":"supercont5.3","end_pos":473284,"start_pos":472043,"strand":"forward"},"low_complexity_region_coords":[[133,145]],"name":"ect1","ortholog_annotations":[{"gene_uniquename":"SJAG_04628","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8756","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04628","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC15E1.05c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04628","ortholog_taxonid":4932,"ortholog_uniquename":"YGR007W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04628","ortholog_taxonid":4932,"ortholog_uniquename":"YGR007W","reference_uniquename":"PMID:26896847"}],"product":"ethanolamine-phosphate cytidylyltransferase","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0006629","GO:0016779","GO:0005634","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004306":null,"GO:0005634":null,"GO:0005829":null,"GO:0006646":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04628.1"],"transcripts_by_uniquename":{"SJAG_04628.1":null},"uniprot_identifier":"B6K7C0","uniquename":"SJAG_04628"}


id: SJAG_04629
data:
  {"cv_annotations":{"biological_process":[{"annotations":[85423],"is_not":false,"summary":null,"term":"GO:0006886"},{"annotations":[85424],"is_not":false,"summary":null,"term":"GO:0042147"}],"cellular_component":[{"annotations":[59189,85419],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[85420],"is_not":false,"summary":null,"term":"GO:0005768"},{"annotations":[85421],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[85422],"is_not":false,"summary":null,"term":"GO:0030904"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB09425","EnsemblGenomes-Gn:SJAG_04629","GOA:B6K7C1","InterPro:IPR000979","InterPro:IPR029052","InterPro:IPR028661","InterPro:IPR024654","UniProtKB/TrEMBL:B6K7C1"],"deletion_viability":"unknown","disordered_region_coords":[[141,142]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"gua2","uniquename":"SJAG_04634"},{"uniquename":"SJAG_04633"},{"name":"grx2","uniquename":"SJAG_04632"},{"name":"naa10","uniquename":"SJAG_04631"},{"uniquename":"SJAG_04630"},{"name":"vps29","uniquename":"SJAG_04629"},{"name":"ect1","uniquename":"SJAG_04628"},{"name":"hal3","uniquename":"SJAG_04627"},{"name":"rpl42","uniquename":"SJAG_04626"},{"uniquename":"SJAG_04625"},{"name":"bud6","uniquename":"SJAG_04624"}],"genes_by_uniquename":{"HGNC:14340":null,"SJAG_04629":null,"SPAC15E1.06":null,"YHR012W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.60.21.10","interpro_id":"IPR029052","interpro_name":"Metallo-dependent phosphatase-like","interpro_type":"Homologous_superfamily","locations":[{"end":187,"score":0.0,"start":1}],"model":"5xcjB00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF12850","interpro_id":"IPR024654","interpro_name":"Calcineurin-like phosphoesterase domain, lpxH-type","interpro_type":"Domain","locations":[{"end":144,"score":9.9999998245167e-15,"start":1}],"model":"PF12850","name":"Calcineurin-like phosphoesterase superfamily domain"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11124","interpro_id":"IPR000979","interpro_name":"Phosphodiesterase MJ0936/Vps29","interpro_type":"Family","locations":[{"end":185,"score":0.0,"start":1}],"model":"PTHR11124:SF12","name":"VACUOLAR SORTING PROTEIN VPS29"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF56300","interpro_id":"IPR029052","interpro_name":"Metallo-dependent phosphatase-like","interpro_type":"Homologous_superfamily","locations":[{"end":184,"score":2.0700000645288575e-36,"start":1}],"model":"0051688","name":"Metallo-dependent phosphatases"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR00040","interpro_id":"IPR000979","interpro_name":"Phosphodiesterase MJ0936/Vps29","interpro_type":"Family","locations":[{"end":139,"score":2.0999999838446953e-22,"start":1}],"model":"TIGR00040","name":"YfcE family phosphodiesterase"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd07394","interpro_id":"IPR028661","interpro_name":"Vacuolar protein sorting-associated protein 29","interpro_type":"Family","locations":[{"end":183,"score":0.0,"start":2}],"model":"cd07394","name":"Homo sapiens Vps29 and related proteins, metallophosphatase domain"}],"location":{"chromosome_name":"supercont5.3","end_pos":471895,"start_pos":471171,"strand":"reverse"},"name":"vps29","ortholog_annotations":[{"gene_uniquename":"SJAG_04629","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14340","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04629","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC15E1.06","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04629","ortholog_taxonid":4932,"ortholog_uniquename":"YHR012W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04629","ortholog_taxonid":4932,"ortholog_uniquename":"YHR012W","reference_uniquename":"PMID:26896847"}],"product":"retromer complex subunit Vps29","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0031410","GO:0005768","GO:0016192","GO:0005829","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005768":null,"GO:0005829":null,"GO:0006886":null,"GO:0030904":null,"GO:0042147":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04629.1"],"transcripts_by_uniquename":{"SJAG_04629.1":null},"uniprot_identifier":"B6K7C1","uniquename":"SJAG_04629"}


id: SJAG_04630
data:
  {"cv_annotations":{},"dbxrefs":["EnsemblGenomes-Tr:EEB09426","EnsemblGenomes-Gn:SJAG_04630","UniProtKB/TrEMBL:B6K7C2"],"deletion_viability":"unknown","disordered_region_coords":[[22,73],[76,84],[86,87],[110,123],[173,175],[184,204],[150,162]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mti3","uniquename":"SJAG_04635"},{"name":"gua2","uniquename":"SJAG_04634"},{"uniquename":"SJAG_04633"},{"name":"grx2","uniquename":"SJAG_04632"},{"name":"naa10","uniquename":"SJAG_04631"},{"uniquename":"SJAG_04630"},{"name":"vps29","uniquename":"SJAG_04629"},{"name":"ect1","uniquename":"SJAG_04628"},{"name":"hal3","uniquename":"SJAG_04627"},{"name":"rpl42","uniquename":"SJAG_04626"},{"uniquename":"SJAG_04625"}],"genes_by_uniquename":{"SJAG_04630":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.3","end_pos":471134,"start_pos":470457,"strand":"forward"},"low_complexity_region_coords":[[163,172]],"product":"candidate Meikin ortholog, syntenic position","taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_04630.1"],"transcripts_by_uniquename":{"SJAG_04630.1":null},"uniprot_identifier":"B6K7C2","uniquename":"SJAG_04630"}


id: SJAG_04631
data:
  {"cv_annotations":{"biological_process":[{"annotations":[85428],"is_not":false,"summary":null,"term":"GO:0051604"}],"cellular_component":[{"annotations":[85425],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[85426],"is_not":false,"summary":null,"term":"GO:0031415"},{"annotations":[85427],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[85429],"is_not":false,"summary":null,"term":"GO:1990190"},{"annotations":[85430],"is_not":false,"summary":null,"term":"GO:1990189"}]},"dbxrefs":["InterPro:IPR000182","InterPro:IPR016181","EnsemblGenomes-Tr:EEB09427","EnsemblGenomes-Gn:SJAG_04631","UniProtKB/TrEMBL:B6K7C3","GOA:B6K7C3"],"deletion_viability":"unknown","disordered_region_coords":[[150,154],[157,161]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_04636"},{"name":"mti3","uniquename":"SJAG_04635"},{"name":"gua2","uniquename":"SJAG_04634"},{"uniquename":"SJAG_04633"},{"name":"grx2","uniquename":"SJAG_04632"},{"name":"naa10","uniquename":"SJAG_04631"},{"uniquename":"SJAG_04630"},{"name":"vps29","uniquename":"SJAG_04629"},{"name":"ect1","uniquename":"SJAG_04628"},{"name":"hal3","uniquename":"SJAG_04627"},{"name":"rpl42","uniquename":"SJAG_04626"}],"genes_by_uniquename":{"HGNC:18704":null,"HGNC:28125":null,"SJAG_04631":null,"SPAC15E1.08":null,"YHR013C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.630.30","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":173,"score":0.0,"start":1}],"model":"4xnhB00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00583","interpro_id":"IPR000182","interpro_name":"GNAT domain","interpro_type":"Domain","locations":[{"end":124,"score":3.9000000451316907e-10,"start":27}],"model":"PF00583","name":"Acetyltransferase (GNAT) family"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51186","interpro_id":"IPR000182","interpro_name":"GNAT domain","interpro_type":"Domain","locations":[{"end":153,"score":0.0,"start":1}],"model":"PS51186","name":"Gcn5-related N-acetyltransferase (GNAT) domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR23091","interpro_id":"IPR045047","interpro_name":"N-acetyltransferase Ard1-like","interpro_type":"Family","locations":[{"end":166,"score":0.0,"start":1}],"model":"PTHR23091:SF4","name":"N-TERMINAL ACETYLTRANSFERASE"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF55729","interpro_id":"IPR016181","interpro_name":"Acyl-CoA N-acyltransferase","interpro_type":"Homologous_superfamily","locations":[{"end":153,"score":1.1699999982116299e-23,"start":1}],"model":"0045896","name":"Acyl-CoA N-acyltransferases (Nat)"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd04301","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":92,"score":6.855309948150534e-6,"start":42}],"model":"cd04301","name":"N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate"}],"location":{"chromosome_name":"supercont5.3","end_pos":470074,"start_pos":469189,"strand":"reverse"},"name":"naa10","ortholog_annotations":[{"gene_uniquename":"SJAG_04631","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18704","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04631","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28125","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04631","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC15E1.08","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04631","ortholog_taxonid":4932,"ortholog_uniquename":"YHR013C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04631","ortholog_taxonid":4932,"ortholog_uniquename":"YHR013C","reference_uniquename":"PMID:26896847"}],"product":"NatA N-acetyltransferase complex catalytic subunit Naa10","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0051604","GO:0034212","GO:0005829","GO:0005634","GO:0016746"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0031415":null,"GO:0051604":null,"GO:1990189":null,"GO:1990190":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04631.1"],"transcripts_by_uniquename":{"SJAG_04631.1":null},"uniprot_identifier":"B6K7C3","uniquename":"SJAG_04631"}


id: SJAG_04632
data:
  {"cv_annotations":{"biological_process":[{"annotations":[85433],"is_not":false,"summary":null,"term":"GO:0045454"},{"annotations":[85434],"is_not":false,"summary":null,"term":"GO:0034599"},{"annotations":[85435],"is_not":false,"summary":null,"term":"GO:0019430"}],"cellular_component":[{"annotations":[85431],"is_not":false,"summary":null,"term":"GO:0005739"},{"annotations":[85432],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[85436],"is_not":false,"summary":null,"term":"GO:0015038"},{"annotations":[85437],"is_not":false,"summary":null,"term":"GO:0004602"},{"annotations":[85438],"is_not":false,"summary":null,"term":"GO:0015035"}]},"dbxrefs":["InterPro:IPR011899","GOA:B6K7C4","UniProtKB/TrEMBL:B6K7C4","EnsemblGenomes-Tr:EEB09428","InterPro:IPR002109","InterPro:IPR014025","InterPro:IPR011767","EnsemblGenomes-Gn:SJAG_04632","InterPro:IPR036249"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_04637"},{"uniquename":"SJAG_04636"},{"name":"mti3","uniquename":"SJAG_04635"},{"name":"gua2","uniquename":"SJAG_04634"},{"uniquename":"SJAG_04633"},{"name":"grx2","uniquename":"SJAG_04632"},{"name":"naa10","uniquename":"SJAG_04631"},{"uniquename":"SJAG_04630"},{"name":"vps29","uniquename":"SJAG_04629"},{"name":"ect1","uniquename":"SJAG_04628"},{"name":"hal3","uniquename":"SJAG_04627"}],"genes_by_uniquename":{"HGNC:16065":null,"HGNC:4330":null,"SJAG_04632":null,"SPAC15E1.09":null,"YCL035C":null,"YDR513W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.30.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":101,"score":3.599999892617479e-34,"start":1}],"model":"4la1A01","name":"Glutaredoxin"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00462","interpro_id":"IPR002109","interpro_name":"Glutaredoxin","interpro_type":"Domain","locations":[{"end":79,"score":1.99999996490334e-13,"start":17}],"model":"PF00462","name":"Glutaredoxin"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00160","interpro_id":"IPR014025","interpro_name":"Glutaredoxin subgroup","interpro_type":"Domain","locations":[{"end":35,"score":1.700000036575222e-11,"start":17},{"end":75,"score":1.700000036575222e-11,"start":62},{"end":89,"score":1.700000036575222e-11,"start":76}],"model":"PR00160","name":""},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00195","interpro_id":"IPR011767","interpro_name":"Glutaredoxin active site","interpro_type":"Active_site","locations":[{"end":35,"score":0.0,"start":19}],"model":"PS00195","name":"Glutaredoxin active site"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51354","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":105,"score":0.0,"start":5}],"model":"PS51354","name":"Glutaredoxin domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR45694","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":101,"score":1.4000000420553268e-30,"start":4}],"model":"PTHR45694:SF27","name":"GLUTAREDOXIN 2"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52833","interpro_id":"IPR036249","interpro_name":"Thioredoxin-like superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":100,"score":1.6400000369784101e-25,"start":6}],"model":"0045879","name":"Thioredoxin-like"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR02180","interpro_id":"IPR011899","interpro_name":"Glutaredoxin, eukaryotic/virial","interpro_type":"Domain","locations":[{"end":97,"score":2.5999999522002384e-24,"start":17}],"model":"TIGR02180","name":"glutaredoxin"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd03419","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":97,"score":8.206169720824305e-38,"start":17}],"model":"cd03419","name":""}],"location":{"chromosome_name":"supercont5.3","end_pos":468897,"start_pos":468574,"strand":"reverse"},"name":"grx2","ortholog_annotations":[{"gene_uniquename":"SJAG_04632","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16065","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04632","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4330","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04632","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC15E1.09","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04632","ortholog_taxonid":4932,"ortholog_uniquename":"YCL035C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04632","ortholog_taxonid":4932,"ortholog_uniquename":"YCL035C","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_04632","ortholog_taxonid":4932,"ortholog_uniquename":"YDR513W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04632","ortholog_taxonid":4932,"ortholog_uniquename":"YDR513W","reference_uniquename":"PMID:26896847"}],"product":"glutaredoxin Grx2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0015036","GO:0098754","GO:0005739","GO:0016491","GO:0140096","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004602":null,"GO:0005634":null,"GO:0005739":null,"GO:0015035":null,"GO:0015038":null,"GO:0019430":null,"GO:0034599":null,"GO:0045454":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04632.1"],"transcripts_by_uniquename":{"SJAG_04632.1":null},"uniprot_identifier":"B6K7C4","uniquename":"SJAG_04632"}


id: SJAG_04633
data:
  {"cv_annotations":{"biological_process":[{"annotations":[85441],"is_not":false,"summary":null,"term":"GO:0043161"},{"annotations":[109502],"is_not":false,"summary":null,"term":"GO:0006511"}],"cellular_component":[{"annotations":[85439,109500],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[85440,109501],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[85442],"is_not":false,"summary":null,"term":"GO:0004866"},{"annotations":[85443],"is_not":false,"summary":null,"term":"GO:0070628"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K7C5","EnsemblGenomes-Gn:SJAG_04633","EnsemblGenomes-Tr:EEB09429","GOA:B6K7C5","InterPro:IPR013886"],"deletion_viability":"unknown","disordered_region_coords":[[114,116],[129,151],[272,289],[153,175],[248,257]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ekc1","uniquename":"SJAG_04638"},{"uniquename":"SJAG_04637"},{"uniquename":"SJAG_04636"},{"name":"mti3","uniquename":"SJAG_04635"},{"name":"gua2","uniquename":"SJAG_04634"},{"uniquename":"SJAG_04633"},{"name":"grx2","uniquename":"SJAG_04632"},{"name":"naa10","uniquename":"SJAG_04631"},{"uniquename":"SJAG_04630"},{"name":"vps29","uniquename":"SJAG_04629"},{"name":"ect1","uniquename":"SJAG_04628"}],"genes_by_uniquename":{"HGNC:9571":null,"SJAG_04633":null,"SPAC15E1.10":null,"SPBP4G3.03":null,"YCR076C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08577","interpro_id":"IPR013886","interpro_name":"PI31 proteasome regulator, C-terminal","interpro_type":"Domain","locations":[{"end":247,"score":2.499999936844688e-6,"start":176}],"model":"PF08577","name":"PI31 proteasome regulator"}],"location":{"chromosome_name":"supercont5.3","end_pos":468172,"start_pos":467303,"strand":"reverse"},"low_complexity_region_coords":[[112,128],[258,271]],"ortholog_annotations":[{"gene_uniquename":"SJAG_04633","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9571","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04633","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9571","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04633","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC15E1.10","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04633","ortholog_taxonid":4896,"ortholog_uniquename":"SPBP4G3.03","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_04633","ortholog_taxonid":4932,"ortholog_uniquename":"YCR076C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04633","ortholog_taxonid":4932,"ortholog_uniquename":"YCR076C","reference_uniquename":"PMID:29761456"}],"product":"PI31 proteasome regulator, C-terminal","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0030234","GO:0098772","GO:0030163","GO:0005829","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004866":null,"GO:0005634":null,"GO:0005829":null,"GO:0006511":null,"GO:0043161":null,"GO:0070628":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04633.1"],"transcripts_by_uniquename":{"SJAG_04633.1":null},"uniprot_identifier":"B6K7C5","uniquename":"SJAG_04633"}


id: SJAG_04634
data:
  {"cv_annotations":{"biological_process":[{"annotations":[62129],"is_not":false,"summary":null,"term":"GO:0006541"},{"annotations":[97277],"is_not":false,"summary":null,"term":"GO:0006177"}],"cellular_component":[{"annotations":[97276],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[97278],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[97279],"is_not":false,"summary":null,"term":"GO:0003921"}]},"dbxrefs":["InterPro:IPR004739","InterPro:IPR014729","InterPro:IPR001674","GOA:B6K7C6","InterPro:IPR022955","InterPro:IPR022310","EnsemblGenomes-Gn:SJAG_04634","InterPro:IPR025777","InterPro:IPR029062","EnsemblGenomes-Tr:EEB09430","UniProtKB/TrEMBL:B6K7C6","InterPro:IPR017926"],"deletion_viability":"unknown","disordered_region_coords":[[1,2]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_04639"},{"name":"ekc1","uniquename":"SJAG_04638"},{"uniquename":"SJAG_04637"},{"uniquename":"SJAG_04636"},{"name":"mti3","uniquename":"SJAG_04635"},{"name":"gua2","uniquename":"SJAG_04634"},{"uniquename":"SJAG_04633"},{"name":"grx2","uniquename":"SJAG_04632"},{"name":"naa10","uniquename":"SJAG_04631"},{"uniquename":"SJAG_04630"},{"name":"vps29","uniquename":"SJAG_04629"}],"genes_by_uniquename":{"HGNC:4378":null,"SJAG_04634":null,"SPAP7G5.02c":null,"YMR217W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.300.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":539,"score":2.802596928649634e-45,"start":419}],"model":"2dplA02","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.620","interpro_id":"IPR014729","interpro_name":"Rossmann-like alpha/beta/alpha sandwich fold","interpro_type":"Homologous_superfamily","locations":[{"end":418,"score":0.0,"start":217}],"model":"3uowA02","name":"HUPs"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.880","interpro_id":"IPR029062","interpro_name":"Class I glutamine amidotransferase-like","interpro_type":"Homologous_superfamily","locations":[{"end":213,"score":0.0,"start":14}],"model":"3uowB01","name":""},{"dbname":"HAMAP","evidence":"PrfScan","id":"MF_00344","interpro_id":"IPR022955","interpro_name":"GMP synthase","interpro_type":"Family","locations":[{"end":539,"score":0.0,"start":18}],"model":"MF_00344","name":"GMP synthase [glutamine-hydrolyzing] [guaA]"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00117","interpro_id":"IPR017926","interpro_name":"Glutamine amidotransferase","interpro_type":"Domain","locations":[{"end":208,"score":3.499999352270202e-39,"start":22}],"model":"PF00117","name":"Glutamine amidotransferase class-I"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00958","interpro_id":"IPR001674","interpro_name":"GMP synthase, C-terminal","interpro_type":"Domain","locations":[{"end":538,"score":2.8000000647563228e-36,"start":447}],"model":"PF00958","name":"GMP synthase C terminal domain"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00096","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":73,"score":1.9999999949504854e-6,"start":64},{"end":102,"score":1.9999999949504854e-6,"start":91},{"end":198,"score":1.9999999949504854e-6,"start":185}],"model":"PR00096","name":""},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51273","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":215,"score":0.0,"start":20}],"model":"PS51273","name":"Glutamine amidotransferase type 1 domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51553","interpro_id":"IPR025777","interpro_name":"GMP synthetase ATP pyrophosphatase domain","interpro_type":"Domain","locations":[{"end":413,"score":0.0,"start":216}],"model":"PS51553","name":"GMP synthetase ATP pyrophosphatase (GMPS ATP-PPase) domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11922","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":539,"score":0.0,"start":18}],"model":"PTHR11922:SF2","name":"GMP SYNTHASE-RELATED"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52317","interpro_id":"IPR029062","interpro_name":"Class I glutamine amidotransferase-like","interpro_type":"Homologous_superfamily","locations":[{"end":246,"score":0.0,"start":19}],"model":"0047949","name":"Class I glutamine amidotransferase-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52402","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":459,"score":0.0,"start":202}],"model":"0045391","name":"Adenine nucleotide alpha hydrolases-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF54810","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":539,"score":0.0,"start":418}],"model":"0047036","name":"GMP synthetase C-terminal dimerisation domain"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR00884","interpro_id":"IPR001674","interpro_name":"GMP synthase, C-terminal","interpro_type":"Domain","locations":[{"end":539,"score":0.0,"start":220}],"model":"TIGR00884","name":"glutamine-hydrolyzing GMP synthase, C-terminal domain"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR00888","interpro_id":"IPR004739","interpro_name":"GMP synthase, glutamine amidotransferase","interpro_type":"Domain","locations":[{"end":212,"score":0.0,"start":21}],"model":"TIGR00888","name":"glutamine-hydrolyzing GMP synthase, N-terminal domain"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd01742","interpro_id":"IPR004739","interpro_name":"GMP synthase, glutamine amidotransferase","interpro_type":"Domain","locations":[{"end":206,"score":0.0,"start":21}],"model":"cd01742","name":"Type 1 glutamine amidotransferase (GATase1) domain found in GMP synthetase"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd01997","interpro_id":"IPR001674","interpro_name":"GMP synthase, C-terminal","interpro_type":"Domain","locations":[{"end":537,"score":0.0,"start":238}],"model":"cd01997","name":""}],"location":{"chromosome_name":"supercont5.3","end_pos":467027,"start_pos":465408,"strand":"forward"},"name":"gua2","ortholog_annotations":[{"gene_uniquename":"SJAG_04634","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4378","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04634","ortholog_taxonid":4896,"ortholog_uniquename":"SPAP7G5.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04634","ortholog_taxonid":4932,"ortholog_uniquename":"YMR217W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04634","ortholog_taxonid":4932,"ortholog_uniquename":"YMR217W","reference_uniquename":"PMID:26896847"}],"product":"GMP synthase [glutamine-hydrolyzing] Gua2","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0055086","GO:0006520","GO:0016874","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003921":null,"GO:0005524":null,"GO:0005829":null,"GO:0006177":null,"GO:0006541":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04634.1"],"transcripts_by_uniquename":{"SJAG_04634.1":null},"uniprot_identifier":"B6K7C6","uniquename":"SJAG_04634"}


id: SJAG_04635
data:
  {"cv_annotations":{"biological_process":[{"annotations":[101708],"is_not":false,"summary":null,"term":"GO:0070124"},{"annotations":[101709],"is_not":false,"summary":null,"term":"GO:0032790"}],"cellular_component":[{"annotations":[101706],"is_not":false,"summary":null,"term":"GO:0005759"},{"annotations":[101707],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[101710],"is_not":false,"summary":null,"term":"GO:0097177"},{"annotations":[101711],"is_not":false,"summary":null,"term":"GO:0003743"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K7C7","GOA:B6K7C7","EnsemblGenomes-Gn:SJAG_04635","EnsemblGenomes-Tr:EEB09431","InterPro:IPR036788"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"edc3","uniquename":"SJAG_04640"},{"uniquename":"SJAG_04639"},{"name":"ekc1","uniquename":"SJAG_04638"},{"uniquename":"SJAG_04637"},{"uniquename":"SJAG_04636"},{"name":"mti3","uniquename":"SJAG_04635"},{"name":"gua2","uniquename":"SJAG_04634"},{"uniquename":"SJAG_04633"},{"name":"grx2","uniquename":"SJAG_04632"},{"name":"naa10","uniquename":"SJAG_04631"},{"uniquename":"SJAG_04630"}],"genes_by_uniquename":{"HGNC:29788":null,"SJAG_04635":null,"SPBC18E5.13":null,"YJL131C":null},"has_protein_features":false,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.110.10","interpro_id":"IPR036788","interpro_name":"Translation initiation factor 3 (IF-3), C-terminal domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":214,"score":2.7999999474559445e-6,"start":121}],"model":"1tigA00","name":"Translation initiation factor 3 (IF-3), C-terminal domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF55200","interpro_id":"IPR036788","interpro_name":"Translation initiation factor 3 (IF-3), C-terminal domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":214,"score":0.00005759999839938246,"start":132}],"model":"0053103","name":"Translation initiation factor IF3, C-terminal domain"}],"location":{"chromosome_name":"supercont5.3","end_pos":464943,"start_pos":464296,"strand":"reverse"},"name":"mti3","ortholog_annotations":[{"gene_uniquename":"SJAG_04635","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:29788","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04635","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC18E5.13","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04635","ortholog_taxonid":4932,"ortholog_uniquename":"YJL131C","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial translation initiation factor Mti3","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0140053","GO:0045182","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003743":null,"GO:0005739":null,"GO:0005759":null,"GO:0032790":null,"GO:0070124":null,"GO:0097177":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04635.1"],"transcripts_by_uniquename":{"SJAG_04635.1":null},"uniprot_identifier":"B6K7C7","uniquename":"SJAG_04635"}


id: SJAG_04636
data:
  {"cv_annotations":{},"dbxrefs":["UniProtKB/TrEMBL:B6K7C8","EnsemblGenomes-Gn:SJAG_04636","EnsemblGenomes-Tr:EEB09432"],"deletion_viability":"unknown","disordered_region_coords":[[67,74],[76,80]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mas2","uniquename":"SJAG_04641"},{"name":"edc3","uniquename":"SJAG_04640"},{"uniquename":"SJAG_04639"},{"name":"ekc1","uniquename":"SJAG_04638"},{"uniquename":"SJAG_04637"},{"uniquename":"SJAG_04636"},{"name":"mti3","uniquename":"SJAG_04635"},{"name":"gua2","uniquename":"SJAG_04634"},{"uniquename":"SJAG_04633"},{"name":"grx2","uniquename":"SJAG_04632"},{"name":"naa10","uniquename":"SJAG_04631"}],"genes_by_uniquename":{"SJAG_04636":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.3","end_pos":461701,"start_pos":461369,"strand":"forward"},"product":"dubious","taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_04636.1"],"transcripts_by_uniquename":{"SJAG_04636.1":null},"uniprot_identifier":"B6K7C8","uniquename":"SJAG_04636"}


id: SJAG_04637
data:
  {"cv_annotations":{"biological_process":[{"annotations":[105564,105571,106726],"is_not":false,"summary":null,"term":"GO:0003333"},{"annotations":[96441],"is_not":false,"summary":null,"term":"GO:0097638"},{"annotations":[96442],"is_not":false,"summary":null,"term":"GO:0097639"},{"annotations":[97297],"is_not":false,"summary":null,"term":"GO:0019740"},{"annotations":[97298],"is_not":false,"summary":null,"term":"GO:1905647"}],"cellular_component":[{"annotations":[96437],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[97295,105566],"is_not":false,"summary":null,"term":"GO:0051286"},{"annotations":[105567],"is_not":false,"summary":null,"term":"GO:0000324"},{"annotations":[105568],"is_not":false,"summary":null,"term":"GO:0005794"},{"annotations":[96438],"is_not":false,"summary":null,"term":"GO:0032178"},{"annotations":[96439,97296,105563,105569,106725],"is_not":false,"summary":null,"term":"GO:0005886"},{"annotations":[96440,105570],"is_not":false,"summary":null,"term":"GO:0031520"}],"molecular_function":[{"annotations":[105565,105572,106727],"is_not":false,"summary":null,"term":"GO:0015171"},{"annotations":[96443],"is_not":false,"summary":null,"term":"GO:0061459"},{"annotations":[96444],"is_not":false,"summary":null,"term":"GO:0015189"},{"annotations":[97299],"is_not":false,"summary":null,"term":"GO:0015193"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K7C9","EnsemblGenomes-Tr:EEB09433","EnsemblGenomes-Gn:SJAG_04637","GOA:B6K7C9","InterPro:IPR004840","InterPro:IPR004841","InterPro:IPR002293"],"deletion_viability":"unknown","disordered_region_coords":[[5,7],[9,23],[68,69]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"coq3","uniquename":"SJAG_04642"},{"name":"mas2","uniquename":"SJAG_04641"},{"name":"edc3","uniquename":"SJAG_04640"},{"uniquename":"SJAG_04639"},{"name":"ekc1","uniquename":"SJAG_04638"},{"uniquename":"SJAG_04637"},{"uniquename":"SJAG_04636"},{"name":"mti3","uniquename":"SJAG_04635"},{"name":"gua2","uniquename":"SJAG_04634"},{"uniquename":"SJAG_04633"},{"name":"grx2","uniquename":"SJAG_04632"}],"genes_by_uniquename":{"HGNC:11057":null,"HGNC:11060":null,"HGNC:11061":null,"HGNC:11062":null,"HGNC:29326":null,"SJAG_04637":null,"SPAC869.11":null,"SPAP7G5.06":null,"SPBC359.01":null,"SPBC359.03c":null,"SPBC460.01c":null,"YBR068C":null,"YBR069C":null,"YCL025C":null,"YDR046C":null,"YDR508C":null,"YGR191W":null,"YKR039W":null,"YNL268W":null,"YNL270C":null,"YOL020W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.20.1740.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":536,"score":0.0,"start":69}],"model":"3giaA00","name":"Amino acid/polyamine transporter I"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00324","interpro_id":"IPR004841","interpro_name":"Amino acid permease/ SLC12A domain","interpro_type":"Domain","locations":[{"end":536,"score":0.0,"start":78}],"model":"PF00324","name":"Amino acid permease"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF006060","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":555,"score":0.0,"start":55}],"model":"PIRSF006060","name":"Amino acid transporter"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00218","interpro_id":"IPR004840","interpro_name":"Amino acid permease, conserved site","interpro_type":"Conserved_site","locations":[{"end":134,"score":0.0,"start":103}],"model":"PS00218","name":"Amino acid permeases signature"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR43341","interpro_id":"IPR050524","interpro_name":"Amino Acid-Polyamine-Organocation Superfamily YAT","interpro_type":"Family","locations":[{"end":563,"score":0.0,"start":52}],"model":"PTHR43341:SF45","name":"AMINO ACID PERMEASE"}],"location":{"chromosome_name":"supercont5.3","end_pos":457631,"start_pos":455907,"strand":"reverse"},"low_complexity_region_coords":[[82,97],[190,203],[305,320]],"ortholog_annotations":[{"gene_uniquename":"SJAG_04637","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11057","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11057","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11057","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11057","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11057","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11060","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11060","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11060","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11060","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11060","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11061","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11061","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11061","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11061","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11061","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11062","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11062","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11062","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11062","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11062","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:29326","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:29326","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:29326","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:29326","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:29326","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC869.11","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4896,"ortholog_uniquename":"SPAP7G5.06","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC359.01","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC359.03c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC460.01c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YBR068C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YBR068C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YBR068C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YBR068C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YBR068C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YBR069C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YBR069C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YBR069C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YBR069C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YBR069C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YCL025C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YCL025C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YCL025C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YCL025C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YCL025C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YDR046C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YDR046C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YDR046C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YDR046C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YDR046C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YDR508C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YDR508C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YDR508C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YDR508C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YDR508C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YGR191W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YGR191W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YGR191W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YGR191W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YGR191W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YKR039W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YKR039W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YKR039W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YKR039W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YKR039W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YNL268W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YNL268W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YNL268W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YNL268W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YNL268W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YNL270C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YNL270C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YNL270C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YNL270C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YNL270C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YOL020W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YOL020W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YOL020W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YOL020W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04637","ortholog_taxonid":4932,"ortholog_uniquename":"YOL020W","reference_uniquename":"PMID:29761456"}],"product":"amino acid transporter family","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0055085","GO:0022857","GO:0005773","GO:0005886","GO:0005794"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000324":null,"GO:0003333":null,"GO:0005794":null,"GO:0005886":null,"GO:0015171":null,"GO:0015189":null,"GO:0015193":null,"GO:0019740":null,"GO:0031520":null,"GO:0032153":null,"GO:0032178":null,"GO:0051286":null,"GO:0061459":null,"GO:0097638":null,"GO:0097639":null,"GO:1905647":null},"tm_domain_coords":[[81,98],[113,135],[186,205],[220,242],[263,285],[300,322],[398,420],[430,452],[473,495],[510,527]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04637.1"],"transcripts_by_uniquename":{"SJAG_04637.1":null},"uniprot_identifier":"B6K7C9","uniquename":"SJAG_04637"}


id: SJAG_04638
data:
  {"cv_annotations":{"biological_process":[{"annotations":[114127],"is_not":false,"summary":null,"term":"GO:1905560"},{"annotations":[114128],"is_not":false,"summary":null,"term":"GO:0023052"}],"cellular_component":[{"annotations":[114122],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[114123],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[114124],"is_not":false,"summary":null,"term":"GO:0005654"},{"annotations":[114125],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[114126],"is_not":false,"summary":null,"term":"GO:0008287"}],"molecular_function":[{"annotations":[114129],"is_not":false,"summary":null,"term":"GO:0072542"},{"annotations":[62943],"is_not":false,"summary":null,"term":"GO:0019903"}]},"dbxrefs":["InterPro:IPR016024","UniProtKB/TrEMBL:B6K7D0","EnsemblGenomes-Tr:EEB09434","GOA:B6K7D0","InterPro:IPR007587","EnsemblGenomes-Gn:SJAG_04638"],"deletion_viability":"unknown","disordered_region_coords":[[71,83],[242,244],[334,336],[338,339],[341,347],[406,453],[455,458],[476,477],[481,482],[485,489],[568,571],[573,575],[577,579],[635,639],[642,643],[652,653],[655,658],[815,832],[662,692],[706,711],[730,739],[760,779]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"vps60","uniquename":"SJAG_04643"},{"name":"coq3","uniquename":"SJAG_04642"},{"name":"mas2","uniquename":"SJAG_04641"},{"name":"edc3","uniquename":"SJAG_04640"},{"uniquename":"SJAG_04639"},{"name":"ekc1","uniquename":"SJAG_04638"},{"uniquename":"SJAG_04637"},{"uniquename":"SJAG_04636"},{"name":"mti3","uniquename":"SJAG_04635"},{"name":"gua2","uniquename":"SJAG_04634"},{"uniquename":"SJAG_04633"}],"genes_by_uniquename":{"HGNC:1173":null,"HGNC:19253":null,"HGNC:29195":null,"SJAG_04638":null,"SPCC663.01c":null,"YFR040W":null,"YGL229C":null,"YJL098W":null,"YKR028W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF04499","interpro_id":"IPR007587","interpro_name":"SIT4 phosphatase-associated protein family","interpro_type":"Family","locations":[{"end":639,"score":0.0,"start":139}],"model":"PF04499","name":"SIT4 phosphatase-associated protein"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12634","interpro_id":"IPR007587","interpro_name":"SIT4 phosphatase-associated protein family","interpro_type":"Family","locations":[{"end":809,"score":0.0,"start":1}],"model":"PTHR12634:SF8","name":"SIT4 YEAST -ASSOCIATING PROTEIN-RELATED"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF48371","interpro_id":"IPR016024","interpro_name":"Armadillo-type fold","interpro_type":"Homologous_superfamily","locations":[{"end":368,"score":0.0000703999976394698,"start":39}],"model":"0038302","name":"ARM repeat"}],"location":{"chromosome_name":"supercont5.3","end_pos":455105,"start_pos":452559,"strand":"reverse"},"low_complexity_region_coords":[[23,36],[227,236],[693,705],[712,729],[740,759],[780,814]],"name":"ekc1","ortholog_annotations":[{"gene_uniquename":"SJAG_04638","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1173","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04638","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19253","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04638","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:29195","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04638","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC663.01c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04638","ortholog_taxonid":4932,"ortholog_uniquename":"YFR040W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04638","ortholog_taxonid":4932,"ortholog_uniquename":"YFR040W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_04638","ortholog_taxonid":4932,"ortholog_uniquename":"YGL229C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04638","ortholog_taxonid":4932,"ortholog_uniquename":"YGL229C","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_04638","ortholog_taxonid":4932,"ortholog_uniquename":"YJL098W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04638","ortholog_taxonid":4932,"ortholog_uniquename":"YJL098W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_04638","ortholog_taxonid":4932,"ortholog_uniquename":"YKR028W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04638","ortholog_taxonid":4932,"ortholog_uniquename":"YKR028W","reference_uniquename":"PMID:26896847"}],"product":"serine/threonine protein phosphatase PP6 regulatory subunit Ekc1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0005829","GO:0005634","GO:0065003","GO:0098772","GO:0005654","GO:0023052","GO:0030234","GO:0005694"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000785":null,"GO:0005634":null,"GO:0005654":null,"GO:0005829":null,"GO:0008287":null,"GO:0019903":null,"GO:0023052":null,"GO:0072542":null,"GO:1905560":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04638.1"],"transcripts_by_uniquename":{"SJAG_04638.1":null},"uniprot_identifier":"B6K7D0","uniquename":"SJAG_04638"}


id: SJAG_04639
data:
  {"cv_annotations":{"biological_process":[{"annotations":[101692],"is_not":false,"summary":null,"term":"GO:0017004"}],"cellular_component":[{"annotations":[101691],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[101693],"is_not":false,"summary":null,"term":"GO:0051539"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K7D1","GOA:B6K7D1","EnsemblGenomes-Gn:SJAG_04639","InterPro:IPR019554","InterPro:IPR011537","InterPro:IPR011538","InterPro:IPR037207","EnsemblGenomes-Tr:EEB09435","InterPro:IPR037225","InterPro:IPR019575"],"deletion_viability":"unknown","disordered_region_coords":[[189,190]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ent1","uniquename":"SJAG_04644"},{"name":"vps60","uniquename":"SJAG_04643"},{"name":"coq3","uniquename":"SJAG_04642"},{"name":"mas2","uniquename":"SJAG_04641"},{"name":"edc3","uniquename":"SJAG_04640"},{"uniquename":"SJAG_04639"},{"name":"ekc1","uniquename":"SJAG_04638"},{"uniquename":"SJAG_04637"},{"uniquename":"SJAG_04636"},{"name":"mti3","uniquename":"SJAG_04635"},{"name":"gua2","uniquename":"SJAG_04634"}],"genes_by_uniquename":{"HGNC:7716":null,"SJAG_04639":null,"SPBC18E5.10":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.20.1440.230","interpro_id":"IPR037207","interpro_name":"NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":418,"score":2.3000000950317638e-18,"start":327}],"model":"6g2jF04","name":"NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.10.20.600","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":325,"score":5.400000185642685e-27,"start":231}],"model":"6g2jF03","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.11540","interpro_id":"IPR037225","interpro_name":"NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":230,"score":0.0,"start":48}],"model":"3i9v102","name":"NADH-ubiquinone oxidoreductase 51kDa subunit"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01512","interpro_id":"IPR011538","interpro_name":"NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain","interpro_type":"Domain","locations":[{"end":218,"score":1.0999996763164809e-39,"start":43}],"model":"PF01512","name":"Respiratory-chain NADH dehydrogenase 51 Kd subunit"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF10531","interpro_id":"IPR019554","interpro_name":"Soluble ligand binding domain","interpro_type":"Domain","locations":[{"end":291,"score":0.00006600000051548705,"start":242}],"model":"PF10531","name":"SLBB domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF10589","interpro_id":"IPR019575","interpro_name":"NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain","interpro_type":"Domain","locations":[{"end":413,"score":1.99999996490334e-14,"start":331}],"model":"PF10589","name":"NADH-ubiquinone oxidoreductase-F iron-sulfur binding region"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11780","interpro_id":"IPR050837","interpro_name":"Complex I 51 kDa subunit","interpro_type":"Family","locations":[{"end":416,"score":0.0,"start":3}],"model":"PTHR11780:SF10","name":"NADH-UBIQUINONE OXIDOREDUCTASE FLAVOPROTEIN 1 NDUFV1"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00928","interpro_id":"IPR019575","interpro_name":"NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain","interpro_type":"Domain","locations":[{"end":374,"score":1.100000021625469e-10,"start":329}],"model":"SM00928","name":"NADH-ubiquinone oxidoreductase-F iron-sulfur binding region"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF140490","interpro_id":"IPR037207","interpro_name":"NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":416,"score":3.789999953397104e-17,"start":328}],"model":"0052767","name":"Nqo1C-terminal domain-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF142019","interpro_id":"IPR037225","interpro_name":"NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":239,"score":0.0,"start":20}],"model":"0052768","name":"Nqo1 FMN-binding domain-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF142984","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":324,"score":1.2899999792573632e-21,"start":240}],"model":"0052769","name":"Nqo1 middle domain-like"}],"location":{"chromosome_name":"supercont5.3","end_pos":451964,"start_pos":450617,"strand":"reverse"},"low_complexity_region_coords":[[44,55]],"ortholog_annotations":[{"gene_uniquename":"SJAG_04639","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:7716","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04639","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC18E5.10","reference_uniquename":"PMID:21511999"}],"product":"mitochondrial iron-sulfur cluster protein, implicated in respiratory complex assembly","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0065003","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005739":null,"GO:0017004":null,"GO:0051539":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04639.1"],"transcripts_by_uniquename":{"SJAG_04639.1":null},"uniprot_identifier":"B6K7D1","uniquename":"SJAG_04639"}


id: SJAG_04640
data:
  {"cv_annotations":{"biological_process":[{"annotations":[101697],"is_not":false,"summary":null,"term":"GO:0031087"},{"annotations":[101698],"is_not":false,"summary":null,"term":"GO:0033962"}],"cellular_component":[{"annotations":[101694],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[101695],"is_not":false,"summary":null,"term":"GO:0010494"},{"annotations":[101696],"is_not":false,"summary":null,"term":"GO:0000932"}],"molecular_function":[{"annotations":[101699],"is_not":false,"summary":null,"term":"GO:0140693"},{"annotations":[101700],"is_not":false,"summary":null,"term":"GO:0003729"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_04640","InterPro:IPR010920","InterPro:IPR004443","InterPro:IPR019050","InterPro:IPR005001","EnsemblGenomes-Tr:EEB09436","InterPro:IPR025762","InterPro:IPR036652","GOA:B6K7D2","InterPro:IPR034107","UniProtKB/TrEMBL:B6K7D2"],"deletion_viability":"unknown","disordered_region_coords":[[55,82],[107,110],[117,198]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"nup211","uniquename":"SJAG_04645"},{"name":"ent1","uniquename":"SJAG_04644"},{"name":"vps60","uniquename":"SJAG_04643"},{"name":"coq3","uniquename":"SJAG_04642"},{"name":"mas2","uniquename":"SJAG_04641"},{"name":"edc3","uniquename":"SJAG_04640"},{"uniquename":"SJAG_04639"},{"name":"ekc1","uniquename":"SJAG_04638"},{"uniquename":"SJAG_04637"},{"uniquename":"SJAG_04636"},{"name":"mti3","uniquename":"SJAG_04635"}],"genes_by_uniquename":{"HGNC:26114":null,"SJAG_04640":null,"SPBC18E5.11c":null,"YEL015W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.30.30.100","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":89,"score":2.7999999930098414e-33,"start":1}],"model":"4a54A00","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.10260","interpro_id":"IPR036652","interpro_name":"YjeF N-terminal domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":436,"score":2.099999969043442e-31,"start":176}],"model":"3d3kA00","name":"YjeF N-terminal domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03853","interpro_id":"IPR004443","interpro_name":"YjeF N-terminal domain","interpro_type":"Domain","locations":[{"end":388,"score":1.199999961918627e-20,"start":225}],"model":"PF03853","name":"YjeF-related protein N-terminus"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF09532","interpro_id":"IPR019050","interpro_name":"FDF domain","interpro_type":"Domain","locations":[{"end":141,"score":3.3000000598804036e-7,"start":87}],"model":"PF09532","name":"FDF domain"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51385","interpro_id":"IPR004443","interpro_name":"YjeF N-terminal domain","interpro_type":"Domain","locations":[{"end":418,"score":0.0,"start":203}],"model":"PS51385","name":"YjeF N-terminal domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51512","interpro_id":"IPR025762","interpro_name":"DFDF domain","interpro_type":"Domain","locations":[{"end":116,"score":0.0,"start":80}],"model":"PS51512","name":"DFDF domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS52002","interpro_id":"IPR047575","interpro_name":"Sm domain","interpro_type":"Domain","locations":[{"end":60,"score":0.0,"start":1}],"model":"PS52002","name":"Sm domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR13612","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":72,"score":0.0,"start":1}],"model":"PTHR13612:SF0","name":"UNCHARACTERIZED"},{"dbname":"SMART","evidence":"Smart scan","id":"SM01199","interpro_id":"IPR019050","interpro_name":"FDF domain","interpro_type":"Domain","locations":[{"end":183,"score":5.400000108526926e-13,"start":86}],"model":"SM01199","name":""},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF50182","interpro_id":"IPR010920","interpro_name":"LSM domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":44,"score":0.00008720000187167898,"start":10}],"model":"0049770","name":"Sm-like ribonucleoproteins"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF64153","interpro_id":"IPR036652","interpro_name":"YjeF N-terminal domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":420,"score":1.5699999501768704e-20,"start":220}],"model":"0039822","name":"YjeF N-terminal domain-like"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd01737","interpro_id":"IPR034107","interpro_name":"Lsm16, N-terminal","interpro_type":"Domain","locations":[{"end":58,"score":2.9463200390040687e-15,"start":3}],"model":"cd01737","name":"Like-Sm protein 16, N-terminal domain"}],"location":{"chromosome_name":"supercont5.3","end_pos":450585,"start_pos":449215,"strand":"forward"},"low_complexity_region_coords":[[86,97],[144,159],[270,284]],"name":"edc3","ortholog_annotations":[{"gene_uniquename":"SJAG_04640","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:26114","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04640","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC18E5.11c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04640","ortholog_taxonid":4932,"ortholog_uniquename":"YEL015W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04640","ortholog_taxonid":4932,"ortholog_uniquename":"YEL015W","reference_uniquename":"PMID:26896847"}],"product":"enhancer of mRNA decapping Edc3","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0010494","GO:0016071","GO:0060090","GO:0000932"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000932":null,"GO:0003729":null,"GO:0005737":null,"GO:0010494":null,"GO:0031087":null,"GO:0033962":null,"GO:0140693":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04640.1"],"transcripts_by_uniquename":{"SJAG_04640.1":null},"uniprot_identifier":"B6K7D2","uniquename":"SJAG_04640"}


id: SJAG_04641
data:
  {"cv_annotations":{"biological_process":[{"annotations":[101703],"is_not":false,"summary":null,"term":"GO:0006627"}],"cellular_component":[{"annotations":[101701],"is_not":false,"summary":null,"term":"GO:0017087"},{"annotations":[101702],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[101704],"is_not":false,"summary":null,"term":"GO:0046872"},{"annotations":[101705],"is_not":false,"summary":null,"term":"GO:0004222"}]},"dbxrefs":["InterPro:IPR011249","GOA:B6K7D3","EnsemblGenomes-Tr:EEB09437","InterPro:IPR007863","EnsemblGenomes-Gn:SJAG_04641","InterPro:IPR001431","UniProtKB/TrEMBL:B6K7D3","InterPro:IPR011765"],"deletion_viability":"unknown","disordered_region_coords":[[106,107],[113,114]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"med31","uniquename":"SJAG_04647"},{"name":"nup211","uniquename":"SJAG_04645"},{"name":"ent1","uniquename":"SJAG_04644"},{"name":"vps60","uniquename":"SJAG_04643"},{"name":"coq3","uniquename":"SJAG_04642"},{"name":"mas2","uniquename":"SJAG_04641"},{"name":"edc3","uniquename":"SJAG_04640"},{"uniquename":"SJAG_04639"},{"name":"ekc1","uniquename":"SJAG_04638"},{"uniquename":"SJAG_04637"},{"uniquename":"SJAG_04636"}],"genes_by_uniquename":{"HGNC:18667":null,"SJAG_04641":null,"SPBC18E5.12c":null,"YHR024C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.830.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":248,"score":7.200011639547343e-41,"start":31},{"end":492,"score":0.0,"start":260}],"model":"2a06B01","name":"Metalloenzyme, LuxS/M16 peptidase-like"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00675","interpro_id":"IPR011765","interpro_name":"Peptidase M16, N-terminal","interpro_type":"Domain","locations":[{"end":200,"score":2.0999999917333043e-25,"start":62}],"model":"PF00675","name":"Insulinase (Peptidase family M16)"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF05193","interpro_id":"IPR007863","interpro_name":"Peptidase M16, C-terminal","interpro_type":"Domain","locations":[{"end":398,"score":7.399999854947099e-27,"start":207}],"model":"PF05193","name":"Peptidase M16 inactive domain"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00143","interpro_id":"IPR001431","interpro_name":"Peptidase M16, zinc-binding site","interpro_type":"Binding_site","locations":[{"end":98,"score":0.0,"start":75}],"model":"PS00143","name":"Insulinase family, zinc-binding region signature"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11851","interpro_id":"IPR050361","interpro_name":"Mitochondrial Processing Peptidase/Ubiquinol-cytochrome c Reductase Complex","interpro_type":"Family","locations":[{"end":469,"score":0.0,"start":39}],"model":"PTHR11851:SF49","name":"METALLOPROTEASE"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF63411","interpro_id":"IPR011249","interpro_name":"Metalloenzyme, LuxS/M16 peptidase-like","interpro_type":"Homologous_superfamily","locations":[{"end":242,"score":7.170000030336898e-39,"start":44},{"end":476,"score":3.1700000098946436e-38,"start":283}],"model":"0045927","name":"LuxS/MPP-like metallohydrolase"}],"location":{"chromosome_name":"supercont5.3","end_pos":448764,"start_pos":447283,"strand":"forward"},"low_complexity_region_coords":[[312,325]],"name":"mas2","ortholog_annotations":[{"gene_uniquename":"SJAG_04641","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18667","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04641","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC18E5.12c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04641","ortholog_taxonid":4932,"ortholog_uniquename":"YHR024C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04641","ortholog_taxonid":4932,"ortholog_uniquename":"YHR024C","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial processing peptidase (MPP) complex alpha subunit Mas2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0005739","GO:0051604","GO:0140096","GO:0006605","GO:0008233"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004222":null,"GO:0005739":null,"GO:0006627":null,"GO:0017087":null,"GO:0046872":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04641.1"],"transcripts_by_uniquename":{"SJAG_04641.1":null},"uniprot_identifier":"B6K7D3","uniquename":"SJAG_04641"}


id: SJAG_04642
data:
  {"cv_annotations":{"biological_process":[{"annotations":[111029],"is_not":false,"summary":null,"term":"GO:0006744"}],"cellular_component":[{"annotations":[111027],"is_not":false,"summary":null,"term":"GO:0031314"},{"annotations":[111028],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[111030],"is_not":false,"summary":null,"term":"GO:0010420"},{"annotations":[111031],"is_not":false,"summary":null,"term":"GO:0061542"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_04642","EnsemblGenomes-Tr:EEB09438","InterPro:IPR013216","GOA:B6K7D4","InterPro:IPR029063","InterPro:IPR010233","UniProtKB/TrEMBL:B6K7D4"],"deletion_viability":"unknown","disordered_region_coords":[[110,116]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_04648"},{"name":"med31","uniquename":"SJAG_04647"},{"name":"nup211","uniquename":"SJAG_04645"},{"name":"ent1","uniquename":"SJAG_04644"},{"name":"vps60","uniquename":"SJAG_04643"},{"name":"coq3","uniquename":"SJAG_04642"},{"name":"mas2","uniquename":"SJAG_04641"},{"name":"edc3","uniquename":"SJAG_04640"},{"uniquename":"SJAG_04639"},{"name":"ekc1","uniquename":"SJAG_04638"},{"uniquename":"SJAG_04637"}],"genes_by_uniquename":{"HGNC:18175":null,"SJAG_04642":null,"SPCC162.05":null,"YOL096C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.150","interpro_id":"IPR029063","interpro_name":"S-adenosyl-L-methionine-dependent methyltransferase superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":263,"score":0.0,"start":31}],"model":"4kdcA00","name":"Vaccinia Virus protein VP39"},{"dbname":"HAMAP","evidence":"PrfScan","id":"MF_00472","interpro_id":"IPR010233","interpro_name":"Ubiquinone biosynthesis O-methyltransferase","interpro_type":"Family","locations":[{"end":263,"score":0.0,"start":31}],"model":"MF_00472","name":"Ubiquinone biosynthesis O-methyltransferase [ubiG]"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08241","interpro_id":"IPR013216","interpro_name":"Methyltransferase type 11","interpro_type":"Domain","locations":[{"end":176,"score":3.499999888929329e-20,"start":79}],"model":"PF08241","name":"Methyltransferase domain"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR43464","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":221,"score":9.500000041880174e-33,"start":22}],"model":"PTHR43464:SF19","name":"METHYLTRANSFERASE"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF53335","interpro_id":"IPR029063","interpro_name":"S-adenosyl-L-methionine-dependent methyltransferase superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":263,"score":2.802596928649634e-45,"start":33}],"model":"0045060","name":"S-adenosyl-L-methionine-dependent methyltransferases"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR01983","interpro_id":"IPR010233","interpro_name":"Ubiquinone biosynthesis O-methyltransferase","interpro_type":"Family","locations":[{"end":256,"score":0.0,"start":31}],"model":"TIGR01983","name":"bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd02440","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":178,"score":3.140890054553064e-13,"start":77}],"model":"cd02440","name":""}],"location":{"chromosome_name":"supercont5.3","end_pos":446875,"start_pos":446069,"strand":"reverse"},"name":"coq3","ortholog_annotations":[{"gene_uniquename":"SJAG_04642","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18175","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04642","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC162.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04642","ortholog_taxonid":4932,"ortholog_uniquename":"YOL096C","reference_uniquename":"PMID:29761456"}],"product":"decaprenyldihydroxybenzoate methyltransferase Coq3","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0006744","GO:0016741","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005739":null,"GO:0006744":null,"GO:0010420":null,"GO:0031314":null,"GO:0061542":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04642.1"],"transcripts_by_uniquename":{"SJAG_04642.1":null},"uniprot_identifier":"B6K7D4","uniquename":"SJAG_04642"}


id: SJAG_04643
data:
  {"coiled_coil_coords":[[64,91],[98,147]],"cv_annotations":{"biological_process":[{"annotations":[111034],"is_not":false,"summary":null,"term":"GO:0006886"},{"annotations":[111035],"is_not":false,"summary":null,"term":"GO:0032511"},{"annotations":[111036],"is_not":false,"summary":null,"term":"GO:0006900"}],"cellular_component":[{"annotations":[111032],"is_not":false,"summary":null,"term":"GO:0000329"},{"annotations":[111033],"is_not":false,"summary":null,"term":"GO:0005771"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB09439","InterPro:IPR005024","UniProtKB/TrEMBL:B6K7D5","GOA:B6K7D5","EnsemblGenomes-Gn:SJAG_04643"],"deletion_viability":"unknown","disordered_region_coords":[[15,20],[43,61],[84,95],[97,100],[141,143],[204,210]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"trm732","uniquename":"SJAG_04649"},{"uniquename":"SJAG_04648"},{"name":"med31","uniquename":"SJAG_04647"},{"name":"nup211","uniquename":"SJAG_04645"},{"name":"ent1","uniquename":"SJAG_04644"},{"name":"vps60","uniquename":"SJAG_04643"},{"name":"coq3","uniquename":"SJAG_04642"},{"name":"mas2","uniquename":"SJAG_04641"},{"name":"edc3","uniquename":"SJAG_04640"},{"uniquename":"SJAG_04639"},{"name":"ekc1","uniquename":"SJAG_04638"}],"genes_by_uniquename":{"HGNC:26942":null,"SJAG_04643":null,"SPCC162.06c":null,"YDR486C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.287.1060","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":96,"score":3.099999901223782e-7,"start":8}],"model":"4abmA00","name":"ESAT-6-like"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:6.10.250.1710","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":176,"score":3.7999998980797756e-11,"start":122}],"model":"2luhB00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03357","interpro_id":"IPR005024","interpro_name":"Snf7 family","interpro_type":"Family","locations":[{"end":191,"score":1.2999999660060772e-36,"start":11}],"model":"PF03357","name":"Snf7"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR22761","interpro_id":"IPR005024","interpro_name":"Snf7 family","interpro_type":"Family","locations":[{"end":189,"score":2.5999999706289806e-30,"start":3}],"model":"PTHR22761:SF12","name":"CHARGED MULTIVESICULAR BODY PROTEIN"}],"location":{"chromosome_name":"supercont5.3","end_pos":445999,"start_pos":445212,"strand":"forward"},"low_complexity_region_coords":[[68,84],[106,121],[158,173],[170,182]],"name":"vps60","ortholog_annotations":[{"gene_uniquename":"SJAG_04643","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:26942","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04643","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC162.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04643","ortholog_taxonid":4932,"ortholog_uniquename":"YDR486C","reference_uniquename":"PMID:29761456"}],"product":"vacuolar sorting protein Vps60","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005768","GO:0005773","GO:0031410","GO:0016192","GO:0061024"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000329":null,"GO:0005771":null,"GO:0006886":null,"GO:0006900":null,"GO:0032511":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04643.1"],"transcripts_by_uniquename":{"SJAG_04643.1":null},"uniprot_identifier":"B6K7D5","uniquename":"SJAG_04643"}


id: SJAG_04644
data:
  {"coiled_coil_coords":[[218,265]],"cv_annotations":{"biological_process":[{"annotations":[111041],"is_not":false,"summary":null,"term":"GO:0000147"},{"annotations":[111042],"is_not":false,"summary":null,"term":"GO:0030036"},{"annotations":[111043],"is_not":false,"summary":null,"term":"GO:0006897"}],"cellular_component":[{"annotations":[111037],"is_not":false,"summary":null,"term":"GO:0030479"},{"annotations":[111038],"is_not":false,"summary":null,"term":"GO:0030125"},{"annotations":[111039],"is_not":false,"summary":null,"term":"GO:0005768"},{"annotations":[111040],"is_not":false,"summary":null,"term":"GO:0005886"}],"molecular_function":[{"annotations":[72762],"is_not":false,"summary":null,"term":"GO:0030276"},{"annotations":[111044],"is_not":false,"summary":null,"term":"GO:0180020"},{"annotations":[111045],"is_not":false,"summary":null,"term":"GO:0005546"}]},"dbxrefs":["GOA:B6K7D6","InterPro:IPR003903","InterPro:IPR013809","UniProtKB/TrEMBL:B6K7D6","InterPro:IPR008942","EnsemblGenomes-Tr:EEB09440","EnsemblGenomes-Gn:SJAG_04644"],"deletion_viability":"unknown","disordered_region_coords":[[26,27],[115,116],[118,129],[651,655],[197,217],[139,181],[266,479],[492,590],[612,637]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"dbp9","uniquename":"SJAG_04650"},{"name":"trm732","uniquename":"SJAG_04649"},{"uniquename":"SJAG_04648"},{"name":"med31","uniquename":"SJAG_04647"},{"name":"nup211","uniquename":"SJAG_04645"},{"name":"ent1","uniquename":"SJAG_04644"},{"name":"vps60","uniquename":"SJAG_04643"},{"name":"coq3","uniquename":"SJAG_04642"},{"name":"mas2","uniquename":"SJAG_04641"},{"name":"edc3","uniquename":"SJAG_04640"},{"uniquename":"SJAG_04639"}],"genes_by_uniquename":{"HGNC:18235":null,"HGNC:18639":null,"HGNC:21604":null,"HGNC:26352":null,"SJAG_04644":null,"SPCC162.07":null,"YDL161W":null,"YLL038C":null,"YLR206W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.25.40.90","interpro_id":"IPR008942","interpro_name":"ENTH/VHS","interpro_type":"Homologous_superfamily","locations":[{"end":151,"score":0.0,"start":1}],"model":"5uccA00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01417","interpro_id":"IPR013809","interpro_name":"ENTH domain","interpro_type":"Domain","locations":[{"end":137,"score":0.0,"start":15}],"model":"PF01417","name":"ENTH domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08226","interpro_id":"IPR013182","interpro_name":"Domain of unknown function DUF1720","interpro_type":"Domain","locations":[{"end":375,"score":0.000012000000424450263,"start":297}],"model":"PF08226","name":"Domain of unknown function (DUF1720)"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50330","interpro_id":"IPR003903","interpro_name":"Ubiquitin interacting motif","interpro_type":"Conserved_site","locations":[{"end":256,"score":0.0,"start":237}],"model":"PS50330","name":"Ubiquitin-interacting motif (UIM) domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50942","interpro_id":"IPR013809","interpro_name":"ENTH domain","interpro_type":"Domain","locations":[{"end":142,"score":0.0,"start":10}],"model":"PS50942","name":"ENTH domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12276","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":615,"score":0.0,"start":4}],"model":"PTHR12276:SF110","name":"EPSIN/ENT-RELATED"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00273","interpro_id":"IPR013809","interpro_name":"ENTH domain","interpro_type":"Domain","locations":[{"end":142,"score":0.0,"start":16}],"model":"SM00273","name":"Epsin N-terminal homology (ENTH) domain"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00726","interpro_id":"IPR003903","interpro_name":"Ubiquitin interacting motif","interpro_type":"Conserved_site","locations":[{"end":228,"score":230.0,"start":209},{"end":256,"score":0.14000000059604645,"start":237}],"model":"SM00726","name":"Ubiquitin-interacting motif."},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF48464","interpro_id":"IPR008942","interpro_name":"ENTH/VHS","interpro_type":"Homologous_superfamily","locations":[{"end":142,"score":0.0,"start":1}],"model":"0047397","name":"ENTH/VHS domain"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd16991","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":145,"score":0.0,"start":14}],"model":"cd16991","name":"Epsin N-Terminal Homology (ENTH) domain of Yeast Ent1, Ent2, and similar proteins"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd22249","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":265,"score":5.065030109108193e-6,"start":213}],"model":"cd22249","name":"UDM1 (ubiquitin-dependent DSB recruitment module 1) found in RING finger proteins RNF168, RNF169 and similar proteins"}],"location":{"chromosome_name":"supercont5.3","end_pos":444309,"start_pos":442280,"strand":"reverse"},"low_complexity_region_coords":[[182,196],[229,248],[250,262],[480,491],[591,611],[638,650]],"name":"ent1","ortholog_annotations":[{"gene_uniquename":"SJAG_04644","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18235","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04644","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18639","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04644","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:21604","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04644","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:26352","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04644","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC162.07","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04644","ortholog_taxonid":4932,"ortholog_uniquename":"YDL161W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04644","ortholog_taxonid":4932,"ortholog_uniquename":"YDL161W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_04644","ortholog_taxonid":4932,"ortholog_uniquename":"YLL038C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04644","ortholog_taxonid":4932,"ortholog_uniquename":"YLR206W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04644","ortholog_taxonid":4932,"ortholog_uniquename":"YLR206W","reference_uniquename":"PMID:26896847"}],"product":"epsin","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0016192","GO:0005768","GO:0030036","GO:0015629","GO:0031410","GO:0005938","GO:0030479","GO:0008289","GO:0005886"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000147":null,"GO:0005546":null,"GO:0005768":null,"GO:0005886":null,"GO:0006897":null,"GO:0030036":null,"GO:0030125":null,"GO:0030276":null,"GO:0030479":null,"GO:0180020":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04644.1"],"transcripts_by_uniquename":{"SJAG_04644.1":null},"uniprot_identifier":"B6K7D6","uniquename":"SJAG_04644"}


id: SJAG_04645
data:
  {"coiled_coil_coords":[[63,97],[102,160],[196,248],[256,276],[295,322],[327,368],[409,436],[444,513],[560,627],[691,774],[803,848],[867,922],[940,974],[986,1020],[1025,1037],[1095,1115],[1127,1154],[1212,1253],[1270,1318],[1348,1403],[1426,1493],[1504,1545],[1550,1570],[1599,1633],[1647,1685],[1695,1722]],"cv_annotations":{"biological_process":[{"annotations":[111052],"is_not":false,"summary":null,"term":"GO:0006406"},{"annotations":[111053],"is_not":false,"summary":null,"term":"GO:0006606"}],"cellular_component":[{"annotations":[111046],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[111047],"is_not":false,"summary":null,"term":"GO:0034399"},{"annotations":[111048],"is_not":false,"summary":null,"term":"GO:0005643"},{"annotations":[111049],"is_not":false,"summary":null,"term":"GO:0044615"},{"annotations":[111050],"is_not":false,"summary":null,"term":"GO:0140602"},{"annotations":[111051],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[111054],"is_not":false,"summary":null,"term":"GO:0017056"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB09441","InterPro:IPR012929","EnsemblGenomes-Gn:SJAG_04645","GOA:B6K7D7","UniProtKB/TrEMBL:B6K7D7"],"deletion_viability":"unknown","disordered_region_coords":[[50,51],[68,70],[84,90],[98,100],[105,119],[123,128],[211,212],[218,219],[279,282],[284,286],[290,293],[308,311],[323,325],[369,370],[375,381],[384,386],[428,429],[431,432],[444,449],[483,484],[486,488],[490,491],[536,537],[574,602],[636,637],[727,728],[775,775],[779,780],[784,791],[975,983],[985,985],[1014,1016],[1018,1020],[1026,1037],[1039,1040],[1043,1051],[1054,1059],[1085,1090],[1092,1093],[1096,1097],[1106,1112],[1137,1139],[1141,1145],[1176,1188],[1226,1231],[1233,1235],[1240,1241],[1244,1246],[1277,1279],[1284,1286],[1333,1336],[1348,1357],[1359,1390],[1394,1399],[1451,1478],[1494,1503],[1598,1598],[1613,1615],[1618,1621],[1756,1827],[1546,1549],[1634,1646],[1686,1694],[1571,1586],[1723,1745]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ubp12","uniquename":"SJAG_04651"},{"name":"dbp9","uniquename":"SJAG_04650"},{"name":"trm732","uniquename":"SJAG_04649"},{"uniquename":"SJAG_04648"},{"name":"med31","uniquename":"SJAG_04647"},{"name":"nup211","uniquename":"SJAG_04645"},{"name":"ent1","uniquename":"SJAG_04644"},{"name":"vps60","uniquename":"SJAG_04643"},{"name":"coq3","uniquename":"SJAG_04642"},{"name":"mas2","uniquename":"SJAG_04641"},{"name":"edc3","uniquename":"SJAG_04640"}],"genes_by_uniquename":{"HGNC:12017":null,"SJAG_04645":null,"SPCC162.08c":null,"YIL149C":null,"YKR095W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.287.1490","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":1024,"score":0.00001700000029813964,"start":860},{"end":1574,"score":8.69999985297909e-6,"start":1413}],"model":"3na7A00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF07926","interpro_id":"IPR012929","interpro_name":"Nucleoprotein TPR/MLP1","interpro_type":"Domain","locations":[{"end":1165,"score":6.899999781032106e-21,"start":1046}],"model":"PF07926","name":"TPR/MLP1/MLP2-like protein"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR18898","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":1515,"score":0.0,"start":12}],"model":"PTHR18898:SF2","name":"NUCLEOPROTEIN TPR-RELATED"}],"location":{"chromosome_name":"supercont5.3","end_pos":441815,"start_pos":436332,"strand":"forward"},"low_complexity_region_coords":[[133,150],[186,195],[258,276],[1293,1305],[1587,1597],[1616,1627],[1661,1674],[1746,1755]],"name":"nup211","ortholog_annotations":[{"gene_uniquename":"SJAG_04645","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12017","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04645","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC162.08c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04645","ortholog_taxonid":4932,"ortholog_uniquename":"YIL149C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04645","ortholog_taxonid":4932,"ortholog_uniquename":"YIL149C","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_04645","ortholog_taxonid":4932,"ortholog_uniquename":"YKR095W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04645","ortholog_taxonid":4932,"ortholog_uniquename":"YKR095W","reference_uniquename":"PMID:26896847"}],"product":"nucleoporin nup211","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0006913","GO:0005198","GO:0005643","GO:0034399"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005643":null,"GO:0005737":null,"GO:0006406":null,"GO:0006606":null,"GO:0017056":null,"GO:0034399":null,"GO:0044615":null,"GO:0140602":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04645.1"],"transcripts_by_uniquename":{"SJAG_04645.1":null},"uniprot_identifier":"B6K7D7","uniquename":"SJAG_04645"}


id: SJAG_04647
data:
  {"cv_annotations":{"biological_process":[{"annotations":[115111],"is_not":false,"summary":null,"term":"GO:0060261"}],"cellular_component":[{"annotations":[115108],"is_not":false,"summary":null,"term":"GO:0070847"},{"annotations":[115109],"is_not":false,"summary":null,"term":"GO:0016592"},{"annotations":[115110],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[115112],"is_not":false,"summary":null,"term":"GO:0003713"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K7D8","InterPro:IPR038089","GOA:B6K7D8","EnsemblGenomes-Tr:EEB09442","InterPro:IPR008831","EnsemblGenomes-Gn:SJAG_04647"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tyr1","uniquename":"SJAG_04652"},{"name":"ubp12","uniquename":"SJAG_04651"},{"name":"dbp9","uniquename":"SJAG_04650"},{"name":"trm732","uniquename":"SJAG_04649"},{"uniquename":"SJAG_04648"},{"name":"med31","uniquename":"SJAG_04647"},{"name":"nup211","uniquename":"SJAG_04645"},{"name":"ent1","uniquename":"SJAG_04644"},{"name":"vps60","uniquename":"SJAG_04643"},{"name":"coq3","uniquename":"SJAG_04642"},{"name":"mas2","uniquename":"SJAG_04641"}],"genes_by_uniquename":{"HGNC:24260":null,"SJAG_04647":null,"SPCP31B10.03c":null,"YGL127C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.10.1340","interpro_id":"IPR038089","interpro_name":"Mediator of RNA polymerase II, subunit Med31 superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":108,"score":2.1000000317516605e-38,"start":7}],"model":"5n9jR00","name":"Mediator of RNA polymerase II, submodule Med31 (Soh1)"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF05669","interpro_id":"IPR008831","interpro_name":"Mediator complex, subunit Med31","interpro_type":"Family","locations":[{"end":110,"score":3.7999999249165733e-34,"start":18}],"model":"PF05669","name":"SOH1"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR13186","interpro_id":"IPR008831","interpro_name":"Mediator complex, subunit Med31","interpro_type":"Family","locations":[{"end":110,"score":3.2000001284576807e-38,"start":16}],"model":"PTHR13186:SF0","name":"MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31"}],"location":{"chromosome_name":"supercont5.3","end_pos":433851,"start_pos":433456,"strand":"forward"},"name":"med31","ortholog_annotations":[{"gene_uniquename":"SJAG_04647","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24260","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04647","ortholog_taxonid":4896,"ortholog_uniquename":"SPCP31B10.03c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04647","ortholog_taxonid":4932,"ortholog_uniquename":"YGL127C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04647","ortholog_taxonid":4932,"ortholog_uniquename":"YGL127C","reference_uniquename":"PMID:26896847"}],"product":"mediator complex subunit Med31","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0060090","GO:0006351","GO:0003712","GO:0006355","GO:0003713"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003713":null,"GO:0005634":null,"GO:0016592":null,"GO:0060261":null,"GO:0070847":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04647.1"],"transcripts_by_uniquename":{"SJAG_04647.1":null},"uniprot_identifier":"B6K7D8","uniquename":"SJAG_04647"}


id: SJAG_04648
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[110986],"is_not":false,"summary":null,"term":"GO:0005938"}],"molecular_function":[{"annotations":[110987],"is_not":false,"summary":null,"term":"GO:0008289"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K7D9","InterPro:IPR039931","EnsemblGenomes-Gn:SJAG_04648","InterPro:IPR019448","EnsemblGenomes-Tr:EEB09443"],"deletion_viability":"unknown","disordered_region_coords":[[179,180],[210,211],[235,249],[273,276]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"arz1","uniquename":"SJAG_04653"},{"name":"tyr1","uniquename":"SJAG_04652"},{"name":"ubp12","uniquename":"SJAG_04651"},{"name":"dbp9","uniquename":"SJAG_04650"},{"name":"trm732","uniquename":"SJAG_04649"},{"uniquename":"SJAG_04648"},{"name":"med31","uniquename":"SJAG_04647"},{"name":"nup211","uniquename":"SJAG_04645"},{"name":"ent1","uniquename":"SJAG_04644"},{"name":"vps60","uniquename":"SJAG_04643"},{"name":"coq3","uniquename":"SJAG_04642"}],"genes_by_uniquename":{"HGNC:27637":null,"HGNC:31419":null,"SJAG_04648":null,"SPCC1494.08c":null,"YBL086C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF10358","interpro_id":"IPR019448","interpro_name":"NT-type C2 domain","interpro_type":"Domain","locations":[{"end":148,"score":2.5999999174903586e-21,"start":8}],"model":"PF10358","name":"N-terminal C2 in EEIG1 and EHBP1 proteins"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51840","interpro_id":"IPR019448","interpro_name":"NT-type C2 domain","interpro_type":"Domain","locations":[{"end":142,"score":0.0,"start":3}],"model":"PS51840","name":"C2 NT-type domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR21456","interpro_id":"IPR039931","interpro_name":"EEIG1/2-like","interpro_type":"Family","locations":[{"end":237,"score":0.0,"start":1}],"model":"PTHR21456:SF1","name":"FAMILY WITH SEQUENCE SIMILARITY 102"}],"location":{"chromosome_name":"supercont5.3","end_pos":433160,"start_pos":432330,"strand":"reverse"},"ortholog_annotations":[{"gene_uniquename":"SJAG_04648","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:27637","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04648","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:31419","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04648","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1494.08c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04648","ortholog_taxonid":4932,"ortholog_uniquename":"YBL086C","reference_uniquename":"PMID:29761456"}],"product":"cortical variant C2 domain protein, human FAM102A and FAM102B ortholog, implicated in signalling or endocytosis","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0008289","GO:0005938"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005938":null,"GO:0008289":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04648.1"],"transcripts_by_uniquename":{"SJAG_04648.1":null},"uniprot_identifier":"B6K7D9","uniquename":"SJAG_04648"}


id: SJAG_04649
data:
  {"cv_annotations":{"biological_process":[{"annotations":[110983],"is_not":false,"summary":null,"term":"GO:0030488"},{"annotations":[110984],"is_not":false,"summary":null,"term":"GO:0002128"}],"cellular_component":[{"annotations":[110981],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[110982],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[110985],"is_not":false,"summary":null,"term":"GO:0030234"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_04649","InterPro:IPR016024","EnsemblGenomes-Tr:EEB09444","InterPro:IPR019442","UniProtKB/TrEMBL:B6K7E0"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"taf13","uniquename":"SJAG_04654"},{"name":"arz1","uniquename":"SJAG_04653"},{"name":"tyr1","uniquename":"SJAG_04652"},{"name":"ubp12","uniquename":"SJAG_04651"},{"name":"dbp9","uniquename":"SJAG_04650"},{"name":"trm732","uniquename":"SJAG_04649"},{"uniquename":"SJAG_04648"},{"name":"med31","uniquename":"SJAG_04647"},{"name":"nup211","uniquename":"SJAG_04645"},{"name":"ent1","uniquename":"SJAG_04644"},{"name":"vps60","uniquename":"SJAG_04643"}],"genes_by_uniquename":{"HGNC:19217":null,"SJAG_04649":null,"SPCC1494.07":null,"YMR259C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF10350","interpro_id":"IPR019442","interpro_name":"THADA/TRM732, DUF2428","interpro_type":"Domain","locations":[{"end":867,"score":0.0,"start":624}],"model":"PF10350","name":"THADA/TRM732, DUF2428"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR14387","interpro_id":"IPR051954","interpro_name":"tRNA (32-2'-O)-methyltransferase regulator THADA","interpro_type":"Family","locations":[{"end":1477,"score":0.0,"start":121}],"model":"PTHR14387:SF0","name":"THADA/DEATH RECEPTOR INTERACTING PROTEIN"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF48371","interpro_id":"IPR016024","interpro_name":"Armadillo-type fold","interpro_type":"Homologous_superfamily","locations":[{"end":925,"score":8.060000254772604e-6,"start":215},{"end":1350,"score":2.699999868127634e-7,"start":913}],"model":"0049802","name":"ARM repeat"}],"location":{"chromosome_name":"supercont5.3","end_pos":432239,"start_pos":427737,"strand":"forward"},"low_complexity_region_coords":[[502,521],[615,622],[684,695],[1239,1256]],"name":"trm732","ortholog_annotations":[{"gene_uniquename":"SJAG_04649","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19217","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04649","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1494.07","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04649","ortholog_taxonid":4932,"ortholog_uniquename":"YMR259C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04649","ortholog_taxonid":4932,"ortholog_uniquename":"YMR259C","reference_uniquename":"PMID:26896847"}],"product":"tRNA (cytosine 32-2'-O)-methyltransferase regulator Trm732","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0005829","GO:0098772","GO:0006399","GO:0030234","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002128":null,"GO:0005634":null,"GO:0005829":null,"GO:0030234":null,"GO:0030488":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04649.1"],"transcripts_by_uniquename":{"SJAG_04649.1":null},"uniprot_identifier":"B6K7E0","uniquename":"SJAG_04649"}


id: SJAG_04650
data:
  {"cv_annotations":{"biological_process":[{"annotations":[110977],"is_not":false,"summary":null,"term":"GO:0006364"}],"cellular_component":[{"annotations":[110975],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[110976],"is_not":false,"summary":null,"term":"GO:0005730"}],"molecular_function":[{"annotations":[110978],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[110979],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[110980],"is_not":false,"summary":null,"term":"GO:0003724"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB09445","InterPro:IPR001650","InterPro:IPR027417","InterPro:IPR014014","InterPro:IPR011545","UniProtKB/TrEMBL:B6K7E1","EnsemblGenomes-Gn:SJAG_04650","InterPro:IPR014001","GOA:B6K7E1"],"deletion_viability":"unknown","disordered_region_coords":[[1,3],[321,348],[380,383],[398,400],[408,413],[415,418],[494,498],[501,506],[510,515],[536,563]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"nnk1","uniquename":"SJAG_04655"},{"name":"taf13","uniquename":"SJAG_04654"},{"name":"arz1","uniquename":"SJAG_04653"},{"name":"tyr1","uniquename":"SJAG_04652"},{"name":"ubp12","uniquename":"SJAG_04651"},{"name":"dbp9","uniquename":"SJAG_04650"},{"name":"trm732","uniquename":"SJAG_04649"},{"uniquename":"SJAG_04648"},{"name":"med31","uniquename":"SJAG_04647"},{"name":"nup211","uniquename":"SJAG_04645"},{"name":"ent1","uniquename":"SJAG_04644"}],"genes_by_uniquename":{"HGNC:18193":null,"SJAG_04650":null,"SPCC1494.06c":null,"YLR276C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.300","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":220,"score":0.0,"start":2},{"end":419,"score":3.499999352270202e-39,"start":221}],"model":"4nhoA01","name":"P-loop containing nucleotide triphosphate hydrolases"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00270","interpro_id":"IPR011545","interpro_name":"DEAD/DEAH box helicase domain","interpro_type":"Domain","locations":[{"end":207,"score":3.000000071226684e-33,"start":35}],"model":"PF00270","name":"DEAD/DEAH box helicase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00271","interpro_id":"IPR001650","interpro_name":"Helicase, C-terminal domain-like","interpro_type":"Domain","locations":[{"end":389,"score":3.79999986555371e-15,"start":253}],"model":"PF00271","name":"Helicase conserved C-terminal domain"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51192","interpro_id":"IPR014001","interpro_name":"Helicase superfamily 1/2, ATP-binding domain","interpro_type":"Domain","locations":[{"end":220,"score":0.0,"start":41}],"model":"PS51192","name":"Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51194","interpro_id":"IPR001650","interpro_name":"Helicase, C-terminal domain-like","interpro_type":"Domain","locations":[{"end":453,"score":0.0,"start":230}],"model":"PS51194","name":"Superfamilies 1 and 2 helicase C-terminal domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51195","interpro_id":"IPR014014","interpro_name":"RNA helicase, DEAD-box type, Q motif","interpro_type":"Domain","locations":[{"end":38,"score":0.0,"start":10}],"model":"PS51195","name":"DEAD-box RNA helicase Q motif profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR47959","interpro_id":"IPR050079","interpro_name":"DEAD box RNA helicase","interpro_type":"Family","locations":[{"end":552,"score":0.0,"start":4}],"model":"PTHR47959:SF13","name":"ATP-DEPENDENT RNA HELICASE RHLE-RELATED"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00487","interpro_id":"IPR014001","interpro_name":"Helicase superfamily 1/2, ATP-binding domain","interpro_type":"Domain","locations":[{"end":234,"score":9.598894480624997e-43,"start":29}],"model":"SM00487","name":"DEAD-like helicases superfamily"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00490","interpro_id":"IPR001650","interpro_name":"Helicase, C-terminal domain-like","interpro_type":"Domain","locations":[{"end":389,"score":4.7999999360269296e-23,"start":271}],"model":"SM00490","name":"helicase superfamily c-terminal domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52540","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":221,"score":0.0,"start":8},{"end":419,"score":2.4700000379252152e-29,"start":230}],"model":"0050691","name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd17961","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":222,"score":0.0,"start":17}],"model":"cd17961","name":"DEAD-box helicase domain of DEAD box protein 56"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd18787","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":398,"score":1.1210387714598537e-44,"start":231}],"model":"cd18787","name":"C-terminal helicase domain of the DEAD box helicases"}],"location":{"chromosome_name":"supercont5.3","end_pos":427269,"start_pos":425578,"strand":"reverse"},"low_complexity_region_coords":[[81,91],[315,326],[336,351]],"name":"dbp9","ortholog_annotations":[{"gene_uniquename":"SJAG_04650","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18193","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04650","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1494.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04650","ortholog_taxonid":4932,"ortholog_uniquename":"YLR276C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04650","ortholog_taxonid":4932,"ortholog_uniquename":"YLR276C","reference_uniquename":"PMID:26896847"}],"product":"ATP-dependent RNA helicase Dbp9","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0016887","GO:0140098","GO:0042254","GO:0005730","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003724":null,"GO:0005524":null,"GO:0005730":null,"GO:0005829":null,"GO:0006364":null,"GO:0016887":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04650.1"],"transcripts_by_uniquename":{"SJAG_04650.1":null},"uniprot_identifier":"B6K7E1","uniquename":"SJAG_04650"}


id: SJAG_04651
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[110970],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[110971],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[110972],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[110973],"is_not":false,"summary":null,"term":"GO:0004843"},{"annotations":[110974],"is_not":false,"summary":null,"term":"GO:0140492"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB09446","InterPro:IPR001394","InterPro:IPR006615","InterPro:IPR018200","UniProtKB/TrEMBL:B6K7E2","GOA:B6K7E2","InterPro:IPR028889","InterPro:IPR035927","InterPro:IPR038765","EnsemblGenomes-Gn:SJAG_04651"],"deletion_viability":"unknown","disordered_region_coords":[[1,41],[44,49],[52,53],[56,65],[93,115],[118,120],[352,354],[430,433],[662,663],[705,706],[710,747],[889,891],[969,970]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sac32","uniquename":"SJAG_04656"},{"name":"nnk1","uniquename":"SJAG_04655"},{"name":"taf13","uniquename":"SJAG_04654"},{"name":"arz1","uniquename":"SJAG_04653"},{"name":"tyr1","uniquename":"SJAG_04652"},{"name":"ubp12","uniquename":"SJAG_04651"},{"name":"dbp9","uniquename":"SJAG_04650"},{"name":"trm732","uniquename":"SJAG_04649"},{"uniquename":"SJAG_04648"},{"name":"med31","uniquename":"SJAG_04647"},{"name":"nup211","uniquename":"SJAG_04645"}],"genes_by_uniquename":{"HGNC:12609":null,"HGNC:12613":null,"HGNC:12627":null,"SJAG_04651":null,"SPCC1494.05c":null,"YJL197W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.10.20.90","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":287,"score":0.000050999999075429514,"start":185}],"model":"3t9lA02","name":"Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.2230.10","interpro_id":"IPR035927","interpro_name":"DUSP-like superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":167,"score":1.2999999391222643e-26,"start":43}],"model":"3jyuB01","name":"DUSP-like"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.90.70.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":548,"score":0.0,"start":297},{"end":968,"score":0.0,"start":595}],"model":"6ml1A00","name":"Cysteine proteinases"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00443","interpro_id":"IPR001394","interpro_name":"Peptidase C19, ubiquitin carboxyl-terminal hydrolase","interpro_type":"Domain","locations":[{"end":959,"score":0.0,"start":314}],"model":"PF00443","name":"Ubiquitin carboxyl-terminal hydrolase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF06337","interpro_id":"IPR006615","interpro_name":"Peptidase C19, ubiquitin-specific peptidase, DUSP domain","interpro_type":"Domain","locations":[{"end":153,"score":1.4000000262543149e-14,"start":74}],"model":"PF06337","name":"DUSP domain"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00972","interpro_id":"IPR018200","interpro_name":"Ubiquitin specific protease, conserved site","interpro_type":"Conserved_site","locations":[{"end":330,"score":0.0,"start":315}],"model":"PS00972","name":"Ubiquitin specific protease (USP) domain signature 1"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00973","interpro_id":"IPR018200","interpro_name":"Ubiquitin specific protease, conserved site","interpro_type":"Conserved_site","locations":[{"end":921,"score":0.0,"start":904}],"model":"PS00973","name":"Ubiquitin specific protease (USP) domain signature 2"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50235","interpro_id":"IPR028889","interpro_name":"Ubiquitin specific protease domain","interpro_type":"Domain","locations":[{"end":962,"score":0.0,"start":314}],"model":"PS50235","name":"Ubiquitin specific protease (USP) domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51283","interpro_id":"IPR006615","interpro_name":"Peptidase C19, ubiquitin-specific peptidase, DUSP domain","interpro_type":"Domain","locations":[{"end":152,"score":0.0,"start":52}],"model":"PS51283","name":"DUSP domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR21646","interpro_id":"IPR050185","interpro_name":"Ubiquitin carboxyl-terminal hydrolase","interpro_type":"Family","locations":[{"end":964,"score":0.0,"start":90}],"model":"PTHR21646:SF24","name":"UBIQUITIN CARBOXYL-TERMINAL HYDROLASE"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00695","interpro_id":"IPR006615","interpro_name":"Peptidase C19, ubiquitin-specific peptidase, DUSP domain","interpro_type":"Domain","locations":[{"end":155,"score":1.4999999523982838e-20,"start":70}],"model":"SM00695","name":"Domain in ubiquitin-specific proteases."},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF143791","interpro_id":"IPR035927","interpro_name":"DUSP-like superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":153,"score":4.449999858781575e-21,"start":50}],"model":"0050384","name":"DUSP-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF54001","interpro_id":"IPR038765","interpro_name":"Papain-like cysteine peptidase superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":961,"score":0.0,"start":312}],"model":"0054026","name":"Cysteine proteinases"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd02674","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":960,"score":0.0,"start":810}],"model":"cd02674","name":""}],"location":{"chromosome_name":"supercont5.3","end_pos":425201,"start_pos":422289,"strand":"reverse"},"low_complexity_region_coords":[[66,73],[728,739],[794,808]],"name":"ubp12","ortholog_annotations":[{"gene_uniquename":"SJAG_04651","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12609","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04651","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12613","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04651","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12627","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04651","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1494.05c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04651","ortholog_taxonid":4932,"ortholog_uniquename":"YJL197W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04651","ortholog_taxonid":4932,"ortholog_uniquename":"YJL197W","reference_uniquename":"PMID:26896847"}],"product":"CSN-associated deubiquitinating enzyme Ubp12","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0008233","GO:0005829","GO:0005634","GO:0140096"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004843":null,"GO:0005634":null,"GO:0005737":null,"GO:0005829":null,"GO:0140492":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04651.1"],"transcripts_by_uniquename":{"SJAG_04651.1":null},"uniprot_identifier":"B6K7E2","uniquename":"SJAG_04651"}


id: SJAG_04652
data:
  {"cv_annotations":{"biological_process":[{"annotations":[110965],"is_not":false,"summary":null,"term":"GO:0006571"}],"cellular_component":[{"annotations":[110964],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[110966],"is_not":false,"summary":null,"term":"GO:0070403"},{"annotations":[110967],"is_not":false,"summary":null,"term":"GO:0050661"},{"annotations":[110968],"is_not":false,"summary":null,"term":"GO:0008977"},{"annotations":[110969],"is_not":false,"summary":null,"term":"GO:0004665"}]},"dbxrefs":["InterPro:IPR008927","UniProtKB/TrEMBL:B6K7E3","EnsemblGenomes-Gn:SJAG_04652","GOA:B6K7E3","EnsemblGenomes-Tr:EEB09447","InterPro:IPR003099","InterPro:IPR012385","InterPro:IPR036291"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tmp1","uniquename":"SJAG_04657"},{"name":"sac32","uniquename":"SJAG_04656"},{"name":"nnk1","uniquename":"SJAG_04655"},{"name":"taf13","uniquename":"SJAG_04654"},{"name":"arz1","uniquename":"SJAG_04653"},{"name":"tyr1","uniquename":"SJAG_04652"},{"name":"ubp12","uniquename":"SJAG_04651"},{"name":"dbp9","uniquename":"SJAG_04650"},{"name":"trm732","uniquename":"SJAG_04649"},{"uniquename":"SJAG_04648"},{"name":"med31","uniquename":"SJAG_04647"}],"genes_by_uniquename":{"SJAG_04652":null,"SPCC1494.04c":null,"YBR166C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.3660.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":308,"score":7.099999793617872e-24,"start":185},{"end":439,"score":7.100000097802637e-20,"start":320}],"model":"2pv7A02","name":"6-phosphogluconate dehydrogenase C-terminal like domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.720","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":181,"score":2.5000000488537034e-25,"start":4}],"model":"2pv7A01","name":"NAD(P)-binding Rossmann-like Domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03807","interpro_id":"IPR028939","interpro_name":"Pyrroline-5-carboxylate reductase, catalytic, N-terminal","interpro_type":"Domain","locations":[{"end":94,"score":0.00800000037997961,"start":17}],"model":"PF03807","name":"NADP oxidoreductase coenzyme F420-dependent"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF20463","interpro_id":"IPR046825","interpro_name":"Prephenate dehydrogenase, dimerization domain","interpro_type":"Domain","locations":[{"end":276,"score":0.03999999910593033,"start":177}],"model":"PF20463","name":"Prephenate dehydrogenase, dimerization domain"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF036510","interpro_id":"IPR012385","interpro_name":"Prephenate dehydrogenase, fungal","interpro_type":"Family","locations":[{"end":441,"score":0.0,"start":4}],"model":"PIRSF036510","name":"Prephenate dehydrogenase, fungal type"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51176","interpro_id":"IPR003099","interpro_name":"Prephenate dehydrogenase","interpro_type":"Domain","locations":[{"end":296,"score":0.0,"start":16}],"model":"PS51176","name":"Prephenate/arogenate dehydrogenase domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR21363","interpro_id":"IPR050812","interpro_name":"Prephenate/Arogenate Dehydrogenase","interpro_type":"Family","locations":[{"end":372,"score":0.0,"start":12}],"model":"PTHR21363:SF0","name":"PREPHENATE DEHYDROGENASE"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF48179","interpro_id":"IPR008927","interpro_name":"6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":282,"score":7.309999929579683e-20,"start":176},{"end":433,"score":4.759999902917422e-15,"start":321}],"model":"0054551","name":"6-phosphogluconate dehydrogenase C-terminal domain-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF51735","interpro_id":"IPR036291","interpro_name":"NAD(P)-binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":171,"score":3.560000067971019e-16,"start":16}],"model":"0054552","name":"NAD(P)-binding Rossmann-fold domains"}],"location":{"chromosome_name":"supercont5.3","end_pos":421779,"start_pos":420382,"strand":"reverse"},"low_complexity_region_coords":[[297,305]],"name":"tyr1","ortholog_annotations":[{"gene_uniquename":"SJAG_04652","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1494.04c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04652","ortholog_taxonid":4932,"ortholog_uniquename":"YBR166C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04652","ortholog_taxonid":4932,"ortholog_uniquename":"YBR166C","reference_uniquename":"PMID:26896847"}],"product":"prephenate dehydrogenase Tyr1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0006520","GO:0016491","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004665":null,"GO:0005829":null,"GO:0006571":null,"GO:0008977":null,"GO:0050661":null,"GO:0070403":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04652.1"],"transcripts_by_uniquename":{"SJAG_04652.1":null},"uniprot_identifier":"B6K7E3","uniquename":"SJAG_04652"}


id: SJAG_04653
data:
  {"cv_annotations":{"biological_process":[{"annotations":[110962],"is_not":false,"summary":null,"term":"GO:0030010"}],"cellular_component":[{"annotations":[110959],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[110960],"is_not":false,"summary":null,"term":"GO:0044732"},{"annotations":[110961],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[110963],"is_not":false,"summary":null,"term":"GO:0005085"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_04653","InterPro:IPR011989","InterPro:IPR040144","UniProtKB/TrEMBL:B6K7E4","InterPro:IPR016024","GOA:B6K7E4","EnsemblGenomes-Tr:EEB09448"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_04658"},{"name":"tmp1","uniquename":"SJAG_04657"},{"name":"sac32","uniquename":"SJAG_04656"},{"name":"nnk1","uniquename":"SJAG_04655"},{"name":"taf13","uniquename":"SJAG_04654"},{"name":"arz1","uniquename":"SJAG_04653"},{"name":"tyr1","uniquename":"SJAG_04652"},{"name":"ubp12","uniquename":"SJAG_04651"},{"name":"dbp9","uniquename":"SJAG_04650"},{"name":"trm732","uniquename":"SJAG_04649"},{"uniquename":"SJAG_04648"}],"genes_by_uniquename":{"HGNC:9859":null,"SJAG_04653":null,"SPCC1494.03":null,"YPL161C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.25.10.10","interpro_id":"IPR011989","interpro_name":"Armadillo-like helical","interpro_type":"Homologous_superfamily","locations":[{"end":409,"score":2.099999997029825e-13,"start":14}],"model":"4rv1D00","name":"Leucine-rich Repeat Variant"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR10957","interpro_id":"IPR040144","interpro_name":"Rap1 GTPase-GDP dissociation stimulator 1","interpro_type":"Family","locations":[{"end":501,"score":0.0,"start":21}],"model":"PTHR10957:SF1","name":"RAP1 GTPASE-GDP DISSOCIATION STIMULATOR 1"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF48371","interpro_id":"IPR016024","interpro_name":"Armadillo-type fold","interpro_type":"Homologous_superfamily","locations":[{"end":459,"score":1.659999915304411e-11,"start":43}],"model":"0046912","name":"ARM repeat"}],"location":{"chromosome_name":"supercont5.3","end_pos":420314,"start_pos":418636,"strand":"forward"},"low_complexity_region_coords":[[230,236]],"name":"arz1","ortholog_annotations":[{"gene_uniquename":"SJAG_04653","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9859","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04653","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1494.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04653","ortholog_taxonid":4932,"ortholog_uniquename":"YPL161C","reference_uniquename":"PMID:29761456"}],"product":"human RAP1 ortholog, GTPase exchange factor, Zfs1 target number 1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005829","GO:0005634","GO:0015630","GO:0030234","GO:0005085","GO:0007163","GO:0005816","GO:0098772"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005085":null,"GO:0005634":null,"GO:0005829":null,"GO:0030010":null,"GO:0044732":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04653.1"],"transcripts_by_uniquename":{"SJAG_04653.1":null},"uniprot_identifier":"B6K7E4","uniquename":"SJAG_04653"}


id: SJAG_04654
data:
  {"cv_annotations":{"biological_process":[{"annotations":[110956],"is_not":false,"summary":null,"term":"GO:0051123"},{"annotations":[110957],"is_not":false,"summary":null,"term":"GO:0006367"}],"cellular_component":[{"annotations":[110954],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[110955],"is_not":false,"summary":null,"term":"GO:0005669"}],"molecular_function":[{"annotations":[110958],"is_not":false,"summary":null,"term":"GO:0016251"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_04654","InterPro:IPR009072","InterPro:IPR003195","UniProtKB/TrEMBL:B6K7E5","GOA:B6K7E5","EnsemblGenomes-Tr:EEB09449"],"deletion_viability":"unknown","disordered_region_coords":[[1,15]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mug9","uniquename":"SJAG_04659"},{"uniquename":"SJAG_04658"},{"name":"tmp1","uniquename":"SJAG_04657"},{"name":"sac32","uniquename":"SJAG_04656"},{"name":"nnk1","uniquename":"SJAG_04655"},{"name":"taf13","uniquename":"SJAG_04654"},{"name":"arz1","uniquename":"SJAG_04653"},{"name":"tyr1","uniquename":"SJAG_04652"},{"name":"ubp12","uniquename":"SJAG_04651"},{"name":"dbp9","uniquename":"SJAG_04650"},{"name":"trm732","uniquename":"SJAG_04649"}],"genes_by_uniquename":{"HGNC:11546":null,"SJAG_04654":null,"SPCC1494.02c":null,"YML098W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.20.10","interpro_id":"IPR009072","interpro_name":"Histone-fold","interpro_type":"Homologous_superfamily","locations":[{"end":61,"score":2.8999999079700154e-20,"start":17}],"model":"1bh9A00","name":"Histone, subunit A"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF02269","interpro_id":"IPR003195","interpro_name":"Transcription initiation factor IID, subunit 13","interpro_type":"Family","locations":[{"end":102,"score":1.4999999523982838e-22,"start":16}],"model":"PF02269","name":"Transcription initiation factor IID, 18kD subunit"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11380","interpro_id":"IPR003195","interpro_name":"Transcription initiation factor IID, subunit 13","interpro_type":"Family","locations":[{"end":104,"score":1.8000000574296898e-31,"start":5}],"model":"PTHR11380:SF5","name":"TRANSCRIPTION INITIATION FACTOR TFIID/SUPT3-RELATED"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF47113","interpro_id":"IPR009072","interpro_name":"Histone-fold","interpro_type":"Homologous_superfamily","locations":[{"end":60,"score":3.139999924569453e-13,"start":17}],"model":"0035549","name":"Histone-fold"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd07978","interpro_id":"IPR003195","interpro_name":"Transcription initiation factor IID, subunit 13","interpro_type":"Family","locations":[{"end":105,"score":2.7844199575936755e-36,"start":15}],"model":"cd07978","name":"The TATA Binding Protein (TBP) Associated Factor 13 (TAF13) is one of several TAFs that bind TBP and is involved in forming Transcription Factor IID (TFIID) complex"}],"location":{"chromosome_name":"supercont5.3","end_pos":418179,"start_pos":417628,"strand":"reverse"},"name":"taf13","ortholog_annotations":[{"gene_uniquename":"SJAG_04654","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11546","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04654","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1494.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04654","ortholog_taxonid":4932,"ortholog_uniquename":"YML098W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04654","ortholog_taxonid":4932,"ortholog_uniquename":"YML098W","reference_uniquename":"PMID:26896847"}],"product":"transcription factor TFIID complex subunit Taf13","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0006351","GO:0140223","GO:0005634","GO:0065003","GO:0005654","GO:0005694"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000785":null,"GO:0005669":null,"GO:0006367":null,"GO:0016251":null,"GO:0051123":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04654.1"],"transcripts_by_uniquename":{"SJAG_04654.1":null},"uniprot_identifier":"B6K7E5","uniquename":"SJAG_04654"}


id: SJAG_04655
data:
  {"cv_annotations":{"biological_process":[{"annotations":[71606],"is_not":false,"summary":null,"term":"GO:0000045"},{"annotations":[71607],"is_not":false,"summary":null,"term":"GO:0000422"},{"annotations":[71608],"is_not":false,"summary":null,"term":"GO:0034727"},{"annotations":[114189],"is_not":false,"summary":null,"term":"GO:0043161"},{"annotations":[71599],"is_not":false,"summary":null,"term":"GO:0010506"},{"annotations":[71609],"is_not":false,"summary":null,"term":"GO:0061709"},{"annotations":[114190],"is_not":false,"summary":null,"term":"GO:0007165"}],"cellular_component":[{"annotations":[71603],"is_not":false,"summary":null,"term":"GO:0005776"},{"annotations":[114187],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[114188],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[71600],"is_not":false,"summary":null,"term":"GO:0034045"}],"molecular_function":[{"annotations":[114191],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[114192],"is_not":false,"summary":null,"term":"GO:0004674"}]},"dbxrefs":["InterPro:IPR000719","GOA:B6K7E6","InterPro:IPR017441","InterPro:IPR011009","EnsemblGenomes-Tr:EEB09450","UniProtKB/TrEMBL:B6K7E6","InterPro:IPR008271","EnsemblGenomes-Gn:SJAG_04655"],"deletion_viability":"unknown","disordered_region_coords":[[288,312],[398,408],[742,743],[758,761],[1,37],[53,161],[171,189],[200,234],[255,268],[327,382]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_04660"},{"name":"mug9","uniquename":"SJAG_04659"},{"uniquename":"SJAG_04658"},{"name":"tmp1","uniquename":"SJAG_04657"},{"name":"sac32","uniquename":"SJAG_04656"},{"name":"nnk1","uniquename":"SJAG_04655"},{"name":"taf13","uniquename":"SJAG_04654"},{"name":"arz1","uniquename":"SJAG_04653"},{"name":"tyr1","uniquename":"SJAG_04652"},{"name":"ubp12","uniquename":"SJAG_04651"},{"name":"dbp9","uniquename":"SJAG_04650"}],"genes_by_uniquename":{"SJAG_04655":null,"SPCC70.05c":null,"YKL171W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.510.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":746,"score":0.0,"start":422}],"model":"4bkyA00","name":"Transferase(Phosphotransferase) domain 1"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00069","interpro_id":"IPR000719","interpro_name":"Protein kinase domain","interpro_type":"Domain","locations":[{"end":723,"score":1.401298464324817e-45,"start":431}],"model":"PF00069","name":"Protein kinase domain"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00107","interpro_id":"IPR017441","interpro_name":"Protein kinase, ATP binding site","interpro_type":"Binding_site","locations":[{"end":461,"score":0.0,"start":433}],"model":"PS00107","name":"Protein kinases ATP-binding region signature"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00108","interpro_id":"IPR008271","interpro_name":"Serine/threonine-protein kinase, active site","interpro_type":"Active_site","locations":[{"end":573,"score":0.0,"start":561}],"model":"PS00108","name":"Serine/Threonine protein kinases active-site signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50011","interpro_id":"IPR000719","interpro_name":"Protein kinase domain","interpro_type":"Domain","locations":[{"end":723,"score":0.0,"start":427}],"model":"PS50011","name":"Protein kinase domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR24346","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":724,"score":0.0,"start":377}],"model":"PTHR24346:SF30","name":"MAP/MICROTUBULE AFFINITY-REGULATING KINASE"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00220","interpro_id":"IPR000719","interpro_name":"Protein kinase domain","interpro_type":"Domain","locations":[{"end":723,"score":8.407790785948902e-45,"start":427}],"model":"SM00220","name":"Serine/Threonine protein kinases, catalytic domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF56112","interpro_id":"IPR011009","interpro_name":"Protein kinase-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":735,"score":0.0,"start":431}],"model":"0040179","name":"Protein kinase-like (PK-like)"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd13994","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":723,"score":0.0,"start":433}],"model":"cd13994","name":"Catalytic domain of Fungal Halotolerance protein 4-like Serine/Threonine kinases"}],"location":{"chromosome_name":"supercont5.3","end_pos":417007,"start_pos":414722,"strand":"forward"},"low_complexity_region_coords":[[38,52],[162,170],[190,199],[235,254],[269,287],[383,397],[688,696]],"name":"nnk1","ortholog_annotations":[{"gene_uniquename":"SJAG_04655","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC70.05c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04655","ortholog_taxonid":4932,"ortholog_uniquename":"YKL171W","reference_uniquename":"PMID:29761456"}],"product":"serine/threonine protein kinase Nnk1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0006914","GO:0004672","GO:0023052","GO:0140096","GO:0005773","GO:0005829","GO:0000407","GO:0030163","GO:0016301"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000045":null,"GO:0000422":null,"GO:0004674":null,"GO:0005524":null,"GO:0005776":null,"GO:0005829":null,"GO:0007165":null,"GO:0010506":null,"GO:0032153":null,"GO:0034045":null,"GO:0034727":null,"GO:0043161":null,"GO:0061709":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04655.1"],"transcripts_by_uniquename":{"SJAG_04655.1":null},"uniprot_identifier":"B6K7E6","uniquename":"SJAG_04655"}


id: SJAG_04656
data:
  {"cv_annotations":{"biological_process":[{"annotations":[114197],"is_not":false,"summary":null,"term":"GO:0016973"}],"cellular_component":[{"annotations":[114193],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[114194],"is_not":false,"summary":null,"term":"GO:0005730"},{"annotations":[114195],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[114196],"is_not":false,"summary":null,"term":"GO:0070390"}]},"dbxrefs":["InterPro:IPR005062","UniProtKB/TrEMBL:B6K7E7","EnsemblGenomes-Tr:EEB09451","EnsemblGenomes-Gn:SJAG_04656"],"deletion_viability":"unknown","disordered_region_coords":[[70,90],[120,123],[179,180],[184,186],[188,190],[512,517],[1,2],[24,37],[48,54]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"apc5","uniquename":"SJAG_04661"},{"uniquename":"SJAG_04660"},{"name":"mug9","uniquename":"SJAG_04659"},{"uniquename":"SJAG_04658"},{"name":"tmp1","uniquename":"SJAG_04657"},{"name":"sac32","uniquename":"SJAG_04656"},{"name":"nnk1","uniquename":"SJAG_04655"},{"name":"taf13","uniquename":"SJAG_04654"},{"name":"arz1","uniquename":"SJAG_04653"},{"name":"tyr1","uniquename":"SJAG_04652"},{"name":"ubp12","uniquename":"SJAG_04651"}],"genes_by_uniquename":{"HGNC:30179":null,"HGNC:6946":null,"SJAG_04656":null,"SPCC70.06":null,"YDR159W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.25.40.990","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":512,"score":0.0,"start":187}],"model":"3t5vA00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03399","interpro_id":"IPR005062","interpro_name":"SAC3/GANP/THP3, conserved domain","interpro_type":"Domain","locations":[{"end":450,"score":0.0,"start":141}],"model":"PF03399","name":"SAC3/GANP family"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12436","interpro_id":"IPR045107","interpro_name":"SAC3/GANP/THP3","interpro_type":"Family","locations":[{"end":488,"score":0.0,"start":44}],"model":"PTHR12436:SF3","name":"80 KDA MCM3-ASSOCIATED PROTEIN"}],"location":{"chromosome_name":"supercont5.3","end_pos":414244,"start_pos":412505,"strand":"reverse"},"low_complexity_region_coords":[[3,23],[38,47],[55,69],[91,100],[107,116]],"name":"sac32","ortholog_annotations":[{"gene_uniquename":"SJAG_04656","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30179","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04656","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:6946","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04656","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC70.06","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04656","ortholog_taxonid":4932,"ortholog_uniquename":"YDR159W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04656","ortholog_taxonid":4932,"ortholog_uniquename":"YDR159W","reference_uniquename":"PMID:26896847"}],"product":"nuclear export factor Sac32","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0006913","GO:0005829","GO:0005634","GO:0005730"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005730":null,"GO:0005829":null,"GO:0016973":null,"GO:0070390":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04656.1"],"transcripts_by_uniquename":{"SJAG_04656.1":null},"uniprot_identifier":"B6K7E7","uniquename":"SJAG_04656"}


