# terms

id: PBO:0041718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calreticulin 3","termid":"PBO:0041718"}


id: FYPO:0001527
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of GTP binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal molecular function","termid":"FYPO:0000706"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal GTP binding","termid":"FYPO:0001527"}


id: GO:0061842
data:
  {"annotated_genes":["SJAG_01422","SJAG_02332","SJAG_04558","SJAG_03200","SJAG_01460","SJAG_05196"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86159,107580,108996,99567,96684,98923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140480"},{"annotations":[86160,99568],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990608"}]},"cv_name":"biological_process","definition":"Any process in which the microtubule organizing center is transported to, and/or maintained in, a specific location within the cell.","definition_xrefs":["PMID:21281821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"is_a","term_name":"localization","termid":"GO:0051179"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01422":null,"SJAG_01460":null,"SJAG_02332":null,"SJAG_03200":null,"SJAG_04558":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"microtubule organizing center localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MTOC localization","type":"exact"},{"name":"MTOC polarity","type":"narrow"},{"name":"microtubule organizing center polarity","type":"narrow"}],"termid":"GO:0061842","terms_by_termid":{"GO:0140480":null,"GO:1990608":null}}


id: PR:O13944
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An oxysterol-binding protein-related protein 11 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol-binding protein homolog C23H4.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.01c","secondary_identifiers":["UniProtKB:O13944"],"synonyms":[{"name":"Spom972h-OSBPL11","type":"exact"}],"termid":"PR:O13944"}


id: PBO:0083805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein that forms a dimer with Ntr1p; also forms a trimer, with Ntr2p and the DExD/H-box RNA helicase Prp43p, that is involved in spliceosome disassembly","termid":"PBO:0083805"}


id: PBO:0004288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane peptidase complex catalytic subunit (predicted)","termid":"PBO:0004288"}


id: PBO:0088266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid desaturase domain protein","termid":"PBO:0088266"}


id: PBO:0061506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurexin 1","termid":"PBO:0061506"}


id: PBO:0003596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrin binding repeats","termid":"PBO:0003596"}


id: PBO:0041561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 73","termid":"PBO:0041561"}


id: PBO:0084789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein; likely involved in translation of the mitochondrial OLI1 mRNA; exhibits genetic interaction with the OLI1 mRNA 5'-untranslated leader","termid":"PBO:0084789"}


id: PBO:0004845
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.1","termid":"PBO:0004845"}


id: PBO:0068685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 66, pseudogene","termid":"PBO:0068685"}


id: PBO:0040082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase D","termid":"PBO:0040082"}


id: PBO:0070393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAR related orphan receptor A","termid":"PBO:0070393"}


id: PBO:0051123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1/OR16-1 (pseudogene)","termid":"PBO:0051123"}


id: GO:0052507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of symbiont jasmonic acid-mediated signal transduction pathways during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of defense-related symbiont jasmonic acid-mediated signal transduction pathway (obsolete GO:0052507)","synonyms":[{"name":"activation by organism of defense-related symbiont SA-mediated signal transduction pathway","type":"narrow"},{"name":"activation by organism of defense-related symbiont jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"induction by organism of defense-related symbiont SA-mediated signal transduction pathway","type":"narrow"},{"name":"induction by organism of defense-related symbiont jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"positive regulation by organism of defense-related symbiont SA-mediated signal transduction pathway","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont jasmonic acid-mediated signal transduction pathway","type":"exact"},{"name":"upregulation by organism of defense-related symbiont SA-mediated signal transduction pathway","type":"narrow"},{"name":"upregulation by organism of defense-related symbiont jasmonic acid-mediated signal transduction pathway","type":"narrow"}],"termid":"GO:0052507"}


id: PBO:0113192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major CTP synthase isozyme (see also URA8); catalyzes ATP-dependent transfer of amide nitrogen from glutamine to UTP, forming CTP, final step in de novo biosynthesis of pyrimidines; involved in phospholipid biosynthesis; targeted to vacuole via AP-3 pathway; capable of forming cytoplasmic filaments termed cytoophidium, especially during conditions of glucose depletion; URA7 has paralog URA8 that arose from the whole genome duplication","termid":"PBO:0113192"}


id: GO:0043979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2B by the addition of an acetyl group to a lysine residue at position 5 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2B-K5 acetylation (obsolete GO:0043979)","synonyms":[{"name":"histone H2B acetylation at K5","type":"exact"}],"termid":"GO:0043979"}


id: PBO:0074264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLCO5A1 antisense RNA 1","termid":"PBO:0074264"}


id: PBO:0089909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3d","termid":"PBO:0089909"}


id: PBO:0058865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9898","termid":"PBO:0058865"}


id: GO:0007561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The eversion (turning inside out) of imaginal discs from their peripodial sacs, resulting in movement of the epithelium to the outside of the larval epidermis.","definition_xrefs":["PMID:11494317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"imaginal disc morphogenesis","termid":"GO:0007560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc eversion","termid":"GO:0007561"}


id: PBO:0003087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication factor A subunit Ssb1","termid":"PBO:0003087"}


id: FYPO:0006219
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which vegetative cell population growth is cell population growth is normal (i.e. indistinguishable from wild type) under conditions of potassium ion starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000257","FYPO:0002060","FYPO:0002057","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"normal cell population growth during potassium ion starvation","synonyms":[{"name":"normal cell population growth during potassium ion depletion","type":"exact"},{"name":"normal cell population growth during potassium ion deprivation","type":"exact"},{"name":"normal cell population growth during potassium starvation","type":"exact"},{"name":"normal cell population growth in response to potassium ion starvation","type":"exact"},{"name":"normal vegetative cell population growth during potassium ion starvation","type":"exact"}],"termid":"FYPO:0006219"}


id: PBO:0043508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNTNAP3 pseudogene 3","termid":"PBO:0043508"}


id: PBO:0005280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-type proton ATPase, P3-type Pma2","termid":"PBO:0005280"}


id: PBO:0031055
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_metaphase/anaphase_transition_delay","termid":"PBO:0031055"}


id: PBO:0075946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal antigen 3-like 1 (pseudogene)","termid":"PBO:0075946"}


id: PR:O60085
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A methionine aminopeptidase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03176","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine aminopeptidase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14C8.03","secondary_identifiers":["UniProtKB:O60085"],"synonyms":[{"name":"MAP 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MetAP 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-METAP2","type":"exact"},{"name":"peptidase M (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60085"}


id: PBO:0050029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA-DQB1 antisense RNA 1","termid":"PBO:0050029"}


id: PBO:0048261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactose mutarotase","termid":"PBO:0048261"}


id: PR:Q9UUK7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphoribosylglycinamide formyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO05064","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylglycinamide formyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC569.08c","secondary_identifiers":["UniProtKB:Q9UUK7"],"synonyms":[{"name":"5'-phosphoribosylglycinamide transformylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GAR transformylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GART (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-purN","type":"exact"}],"termid":"PR:Q9UUK7"}


id: SO:0000576
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Rearranged genomic DNA of immunoglobulin/T-cell receptor gene including L-part1, V-intron and V-J-exon, with the 5'UTR (SO:0000204) and 3'UTR (SO:0000205).","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_segment","termid":"SO:0000936"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VJ_gene_segment","synonyms":[{"name":"V-J-GENE","type":"exact"},{"name":"VJ gene","type":"exact"}],"termid":"SO:0000576"}


id: PBO:0003578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double-strand siRNA ribonuclease Eri1","termid":"PBO:0003578"}


id: PBO:0074115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 30 member 1","termid":"PBO:0074115"}


id: PBO:0034271
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_potential_to_develop_into","termid":"PBO:0034271"}


id: PBO:0058737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6862-1","termid":"PBO:0058737"}


id: GO:0061323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a cell population that contributes to the shaping of the heart.","definition_xrefs":["GOC:dph","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation involved in heart morphogenesis","termid":"GO:0061323"}


id: PBO:0044439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 8","termid":"PBO:0044439"}


id: GO:0003207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a cardiac chamber from unspecified parts. A cardiac chamber is an enclosed cavity within the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"cardiac chamber morphogenesis","termid":"GO:0003206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac chamber formation","synonyms":[{"name":"heart chamber formation","type":"exact"}],"termid":"GO:0003207"}


id: GO:0002424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response mediated by a T cell triggered in response to the presence of a tumor cell.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:16730260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response to tumor cell","termid":"GO:0002418"},{"relation_name":"is_a","term_name":"T cell mediated immunity","termid":"GO:0002456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell mediated immune response to tumor cell","termid":"GO:0002424"}


id: PBO:0044369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic FMR1 interacting protein 2","termid":"PBO:0044369"}


id: PBO:0075752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP receptor subunit alpha","termid":"PBO:0075752"}


id: GO:1900555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving emericellamide.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid metabolic process","termid":"GO:0006629"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"depsipeptide metabolic process","termid":"GO:0050761"},{"relation_name":"is_a","term_name":"lactam metabolic process","termid":"GO:0072338"},{"relation_name":"is_a","term_name":"lactone metabolic process","termid":"GO:1901334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"emericellamide metabolic process","synonyms":[{"name":"emericellamide metabolism","type":"exact"}],"termid":"GO:1900555"}


id: SO:0002323
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A frameshift_variant (SO:0001589) that is degraded by nonsense-mediated decay (NMD).","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frameshift_variant","termid":"SO:0001589"},{"relation_name":"is_a","term_name":"NMD_triggering_variant","termid":"SO:0002319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frameshift_variant_NMD_triggering","synonyms":[{"name":"frameshift variant-NMD triggering","type":"exact"},{"name":"frameshift variant-nonsense-mediated decay triggering","type":"exact"}],"termid":"SO:0002323"}


id: GO:0003258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the differentiation of an endocardial precursor cell.","definition_xrefs":["GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in endocardial precursor cell differentiation (obsolete GO:0003258)","termid":"GO:0003258"}


id: FYPO:0008006
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton phenotype observed during mitotic interphase in which the microtubule minus ends are dynamic (they alternate between growth and shrinkage phases).","definition_xrefs":["PMID:21444751","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule dynamics during vegetative growth","termid":"FYPO:0000901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000054","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"dynamic microtubule minus ends in interphase bundles","synonyms":[{"name":"dynamic microtubule minus ends during interphase","type":"broad"},{"name":"uncapped microtubule minus ends during interphase","type":"broad"},{"name":"uncapped microtubule minus ends in interphase bundles","type":"broad"}],"termid":"FYPO:0008006"}


id: PBO:0056920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MINDY family member 4B","termid":"PBO:0056920"}


id: PBO:0042349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD83 molecule pseudogene 1","termid":"PBO:0042349"}


id: PBO:0001021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase Pzh1","termid":"PBO:0001021"}


id: GO:0090635
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The desmosomal part containing the desmosomal cadherins, desmogleins and desmocollins, that establish contact and adhere to neighboring cells in a Ca2+-dependent manner.","definition_xrefs":["PMID:20066089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"desmosome","termid":"GO:0030057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extracellular core region of desmosome","synonyms":[{"name":"desmoglea","type":"exact"}],"termid":"GO:0090635"}


id: PBO:0091315
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae TEM1","termid":"PBO:0091315"}


id: GO:0160141
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(955/2504/2580) in 23S rRNA = pseudouridine(955/2504/2580) in 23S rRNA.","definition_xrefs":["RHEA:42528","EC:5.4.99.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA pseudouridine synthase activity","termid":"GO:0120159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0140098","GO:0003824"],"is_obsolete":false,"name":"23S rRNA pseudouridine(955/2504/2580) synthase activity","termid":"GO:0160141"}


id: GO:0044226
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Portion of a neuron cell soma closest to the point where the basilar dendrite emerges.","definition_xrefs":["NIF_Subcellular:sao1186862860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell pole","termid":"GO:0060187"},{"relation_name":"part_of","term_name":"neuronal cell body","termid":"GO:0043025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"basal pole of neuron","termid":"GO:0044226"}


id: PBO:0027309
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_5'_deoxyribonuclease_(pyrimidine_dimer)_activity","termid":"PBO:0027309"}


id: PBO:0027837
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cortical_microtubule_cytoskeleton","termid":"PBO:0027837"}


id: GO:0015868
data:
  {"annotated_genes":["SJAG_04325","SJAG_00612","SJAG_03334","SJAG_02050"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071106"},{"annotations":[107034,98958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015866"},{"annotations":[107035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015867"},{"annotations":[97438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"},{"annotations":[97439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"},{"annotations":[107036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140021"},{"annotations":[107037,98959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990544"}]},"cv_name":"biological_process","definition":"The directed movement of a purine ribonucleotide, any compound consisting of a purine ribonucleoside (a purine organic base attached to a ribose sugar) esterified with (ortho)phosphate, into, out of or within a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide transport","termid":"GO:0015865"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00612":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_04325":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"purine ribonucleotide transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015868","terms_by_termid":{"GO:0015866":null,"GO:0015867":null,"GO:0071106":null,"GO:0140021":null,"GO:1990544":null,"GO:1990553":null,"GO:1990554":null}}


id: GO:0062063
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a BBSome complex.","definition_xrefs":["PMID:20603001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"BBSome binding","termid":"GO:0062063"}


id: GO:1901560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a purvalanol A stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to purine-containing compound","termid":"GO:0014074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to purvalanol A","termid":"GO:1901560"}


id: GO:1905869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of 3'-UTR-mediated mRNA stabilization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:19737525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"positive regulation of mRNA catabolic process","termid":"GO:0061014"},{"relation_name":"is_a","term_name":"regulation of 3'-UTR-mediated mRNA stabilization","termid":"GO:1905868"},{"relation_name":"negatively_regulates","term_name":"3'-UTR-mediated mRNA stabilization","termid":"GO:0070935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of 3'-UTR-mediated mRNA stabilization","synonyms":[{"name":"down regulation of 3'-UTR-mediated mRNA stabilization","type":"exact"},{"name":"down regulation of 3'-untranslated region-mediated mRNA stabilization","type":"exact"},{"name":"down-regulation of 3'-UTR-mediated mRNA stabilization","type":"exact"},{"name":"down-regulation of 3'-untranslated region-mediated mRNA stabilization","type":"exact"},{"name":"downregulation of 3'-UTR-mediated mRNA stabilization","type":"exact"},{"name":"downregulation of 3'-untranslated region-mediated mRNA stabilization","type":"exact"},{"name":"inhibition of 3'-UTR-mediated mRNA stabilization","type":"narrow"},{"name":"inhibition of 3'-untranslated region-mediated mRNA stabilization","type":"narrow"},{"name":"negative regulation of 3'-untranslated region-mediated mRNA stabilization","type":"exact"}],"termid":"GO:1905869"}


id: PR:O74970
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-processing factor 39 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-processing factor 39 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.09","secondary_identifiers":["UniProtKB:O74970"],"synonyms":[{"name":"Spom972h-PRPF39","type":"exact"}],"termid":"PR:O74970"}


id: PR:O13797
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1142.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small glutamine-rich tetratricopeptide repeat-containing protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1142.02c","synonyms":[{"name":"Spom972h-SPAC1142.02c","type":"exact"}],"termid":"PR:O13797"}


id: PBO:0028642
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-branched,_elongated_cell_with_branch_forming_adjacent_to_septum","termid":"PBO:0028642"}


id: FYPO:0006782
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a protein measured in a complex that is a precursor of the large ribosomal subunit is lower than normal.","definition_xrefs":["PomBase:mah","PMID:27667686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"},{"relation_name":"is_a","term_name":"abnormal protein complex composition","termid":"FYPO:0005003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein level in large ribosomal subunit precursor","synonyms":[{"name":"decreased large ribosomal subunit precursor complex protein level during vegetative growth","type":"exact"},{"name":"decreased protein level in large ribosomal subunit precursor during mitotic cell cycle","type":"related"},{"name":"decreased protein level in large ribosomal subunit precursor during vegetative growth","type":"exact"},{"name":"decreased protein level in preribosome, large subunit precursor","type":"exact"},{"name":"reduced protein level in large ribosomal subunit precursor","type":"exact"}],"termid":"FYPO:0006782"}


id: PBO:0034257
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_activates","termid":"PBO:0034257"}


id: PATO:0002247
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's having or lacking of substances produced by living organisms that have a color resulting from selective color absorption.","direct_ancestors":[{"relation_name":"correlates_with","term_name":"color","termid":"PATO:0000014"},{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degree of pigmentation","termid":"PATO:0002247"}


id: FYPO:0002432
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of germinated spores and vegetative cells of abnormal shape. The vegetative cells arise from division of some of the germinated spores, and may form a microcolony of up to 64 cells.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including germinated spores and cells with abnormal shape (obsolete FYPO:0002432)","termid":"FYPO:0002432"}


id: GO:0048655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the anther wall tapetum are generated and organized. The anther wall tapetum is a layer of cells that provides a source of nutrition for the pollen grains as they mature.","definition_xrefs":["GOC:tb","GOC:sm","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"post-embryonic plant morphogenesis","termid":"GO:0090698"},{"relation_name":"part_of","term_name":"anther morphogenesis","termid":"GO:0048654"},{"relation_name":"part_of","term_name":"anther wall tapetum development","termid":"GO:0048658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anther wall tapetum morphogenesis","synonyms":[{"name":"differentiation of tapetal layer","type":"narrow"},{"name":"tapetal layer morphogenesis","type":"broad"},{"name":"tapetum morphogenesis","type":"broad"}],"termid":"GO:0048655"}


id: PBO:0088892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoate-protein ligase A","termid":"PBO:0088892"}


id: GO:0002036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of L-glutamate import into a cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid import across plasma membrane","termid":"GO:0010958"},{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"regulates","term_name":"L-glutamate import across plasma membrane","termid":"GO:0098712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of L-glutamate import across plasma membrane","secondary_identifiers":["GO:1900920"],"synonyms":[{"name":"regulation of L-glutamate import","type":"broad"},{"name":"regulation of L-glutamate transport","type":"broad"},{"name":"regulation of L-glutamate uptake","type":"exact"}],"termid":"GO:0002036"}


id: PBO:0086363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative aldose 1-epimerase","termid":"PBO:0086363"}


id: FYPO:0001845
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which kinetochore organization is normal (i.e. indistinguishable from wild type). Kinetochore organization is the assembly, arrangement of constituent parts, or disassembly of kinetochores and their associated proteins.","definition_xrefs":["PomBase:mah","GO:0051383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal kinetochore organization","synonyms":[{"name":"normal kinetochore organisation","type":"exact"},{"name":"normal kinetochore organization during mitotic cell cycle","type":"related"},{"name":"normal kinetochore organization during vegetative growth","type":"exact"}],"termid":"FYPO:0001845"}


id: PBO:0071075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 77","termid":"PBO:0071075"}


id: GO:0070640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving vitamin D3, (3S,5Z,7E)-9,10-secocholesta-5,7,10(19)-trien-3-ol.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin D metabolic process","termid":"GO:0042359"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"vitamin D3 metabolic process","synonyms":[{"name":"calciol metabolic process","type":"exact"},{"name":"cholecalciferol metabolic process","type":"exact"},{"name":"vitamin D3 metabolism","type":"exact"}],"termid":"GO:0070640"}


id: GO:1902185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of shoot apical meristem development.","definition_xrefs":["GOC:TermGenie","PMID:21496644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of shoot apical meristem development","termid":"GO:1902183"},{"relation_name":"positively_regulates","term_name":"shoot apical meristem development","termid":"GO:1902182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of shoot apical meristem development","synonyms":[{"name":"activation of SAM development","type":"exact"},{"name":"activation of primary shoot meristem development","type":"related"},{"name":"activation of promeristem development","type":"broad"},{"name":"activation of shoot apical meristem development","type":"narrow"},{"name":"positive regulation of SAM development","type":"exact"},{"name":"positive regulation of primary shoot meristem development","type":"related"},{"name":"positive regulation of promeristem development","type":"broad"},{"name":"up regulation of SAM development","type":"exact"},{"name":"up regulation of primary shoot meristem development","type":"related"},{"name":"up regulation of promeristem development","type":"broad"},{"name":"up regulation of shoot apical meristem development","type":"exact"},{"name":"up-regulation of SAM development","type":"exact"},{"name":"up-regulation of primary shoot meristem development","type":"related"},{"name":"up-regulation of promeristem development","type":"broad"},{"name":"up-regulation of shoot apical meristem development","type":"exact"},{"name":"upregulation of SAM development","type":"exact"},{"name":"upregulation of primary shoot meristem development","type":"related"},{"name":"upregulation of promeristem development","type":"broad"},{"name":"upregulation of shoot apical meristem development","type":"exact"}],"termid":"GO:1902185"}


id: PBO:0047390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 30","termid":"PBO:0047390"}


id: GO:0035081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process induced by hormones that directly activates any of the steps required for programmed cell death.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"induction of programmed cell death","termid":"GO:0012502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"induction of programmed cell death by hormones","termid":"GO:0035081"}


id: PBO:0067802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 104","termid":"PBO:0067802"}


id: PBO:0090669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ku domain helicase (human XRCC5 ortholog) Pku80","termid":"PBO:0090669"}


id: GO:0097558
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cilium (also called flagellum) found in Giardia species (trophozoite stage). It is nucleated by the left ventral basal body and exits the cell body proximally and dorsal to the ventral disc.","definition_xrefs":["PMID:5961344","GOC:giardia","PMID:16607022","ISBN:9780124260207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"9+2 motile cilium","termid":"GO:0097729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"left ventral flagellum","synonyms":[{"name":"left ventral cilium","type":"exact"}],"termid":"GO:0097558"}


id: PBO:0043909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytokine receptor like factor 2","termid":"PBO:0043909"}


id: GO:0047486
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the eliminative degradation of polysaccharides containing 1,4-beta-D-hexosaminyl and 1,3-beta-D-glucuronosyl or 1,3-alpha-L-iduronosyl linkages to disaccharides containing 4-deoxy-beta-D-gluc-4-enuronosyl groups.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete chondroitin ABC lyase activity (obsolete GO:0047486)","termid":"GO:0047486"}


id: PBO:0041969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC12 pseudogene 1","termid":"PBO:0041969"}


id: PBO:0027365
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_stubby_mononucleate_vegetative_cell","termid":"PBO:0027365"}


id: PBO:0108704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP, GTPase activating protein for Arf6, Ucp3","termid":"PBO:0108704"}


id: GO:0036194
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A prolongation or process extending from a muscle cell. A muscle cell is a mature contractile cell, commonly known as a myocyte. This cell has as part of its cytoplasm myofibrils organized in various patterns.","definition_xrefs":["PMID:22464329","GOC:kmv","CL:0000187","PMID:15930100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"muscle cell projection","synonyms":[{"name":"muscle arm","type":"narrow"},{"name":"myocyte projection","type":"exact"},{"name":"myopodia","type":"narrow"}],"termid":"GO:0036194"}


id: PBO:0003322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase at the interface between RNA polymerase II and chaperone (predicted)","termid":"PBO:0003322"}


id: GO:0051885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of timing of anagen, the growth phase of the hair cycle.","definition_xrefs":["GOC:pr","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hair follicle maturation","termid":"GO:0048818"},{"relation_name":"is_a","term_name":"regulation of timing of anagen","termid":"GO:0051884"},{"relation_name":"positively_regulates","term_name":"anagen","termid":"GO:0042640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of timing of anagen","synonyms":[{"name":"activation of anagen","type":"narrow"},{"name":"positive regulation of anagen","type":"related"},{"name":"stimulation of anagen","type":"narrow"},{"name":"up regulation of anagen","type":"related"},{"name":"up-regulation of anagen","type":"related"},{"name":"upregulation of anagen","type":"related"}],"termid":"GO:0051885"}


id: PBO:0047800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box I3","termid":"PBO:0047800"}


id: PBO:0027377
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_with_nuclear_pore_aggregation_in_cytoplasm_during_mitotic_telophase","termid":"PBO:0027377"}


id: PBO:0064407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNMA family member 2","termid":"PBO:0064407"}


id: PBO:0080555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1 pseudogene 2","termid":"PBO:0080555"}


id: GO:0043499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a component on the surface of a eukaryotic cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete eukaryotic cell surface binding (obsolete GO:0043499)","synonyms":[{"name":"eukaryotic cell surface binding","type":"exact"}],"termid":"GO:0043499"}


id: PBO:0076272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptonemal complex central element protein 1","termid":"PBO:0076272"}


id: GO:0044869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a host organism decreases viral exo-alpha-sialidase activity, the catalysis of the hydrolysis of peptide bonds in a protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by host of viral exo-alpha-sialidase activity","termid":"GO:0044866"},{"relation_name":"is_a","term_name":"negative regulation by host of symbiont catalytic activity","termid":"GO:0052403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation by host of viral exo-alpha-sialidase activity","termid":"GO:0044869"}


id: GO:2000565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of CD8-positive, alpha-beta T cell proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of alpha-beta T cell proliferation","termid":"GO:0046642"},{"relation_name":"is_a","term_name":"regulation of CD8-positive, alpha-beta T cell proliferation","termid":"GO:2000564"},{"relation_name":"is_a","term_name":"negative regulation of CD8-positive, alpha-beta T cell activation","termid":"GO:2001186"},{"relation_name":"negatively_regulates","term_name":"CD8-positive, alpha-beta T cell proliferation","termid":"GO:0035740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of CD8-positive, alpha-beta T cell proliferation","termid":"GO:2000565"}


id: PBO:0017807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Niemann-Pick disease type C2 protein hE1 homolog Npc2 (predicted)","termid":"PBO:0017807"}


id: PBO:0080369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vanin 3, pseudogene","termid":"PBO:0080369"}


id: GO:0006142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving pyrimidine nucleobases.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound metabolic process","termid":"GO:0019219"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"pyrimidine nucleobase metabolic process","termid":"GO:0006206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of pyrimidine nucleobase metabolic process","synonyms":[{"name":"regulation of pyrimidine base metabolic process","type":"exact"},{"name":"regulation of pyrimidine base metabolism","type":"exact"}],"termid":"GO:0006142"}


id: GO:0045989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of striated muscle contraction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of striated muscle contraction","termid":"GO:0006942"},{"relation_name":"is_a","term_name":"positive regulation of muscle contraction","termid":"GO:0045933"},{"relation_name":"positively_regulates","term_name":"striated muscle contraction","termid":"GO:0006941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of striated muscle contraction","synonyms":[{"name":"activation of striated muscle contraction","type":"narrow"},{"name":"stimulation of striated muscle contraction","type":"narrow"},{"name":"up regulation of striated muscle contraction","type":"exact"},{"name":"up-regulation of striated muscle contraction","type":"exact"},{"name":"upregulation of striated muscle contraction","type":"exact"}],"termid":"GO:0045989"}


id: FYPO:0006013
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the ascus is larger than normal.","definition_xrefs":["PomBase:mah","PMID:28410370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ascus morphology","termid":"FYPO:0005156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005156"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005156"],"is_obsolete":false,"name":"large ascus","synonyms":[{"name":"enlarged ascus","type":"exact"},{"name":"increased ascus size","type":"exact"},{"name":"large asci","type":"exact"}],"termid":"FYPO:0006013"}


id: SO:0001671
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence to which bacterial RNA polymerase sigma 70 binds, to begin transcription.","direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial_RNApol_promoter","termid":"SO:0000613"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bacterial_RNApol_promoter_sigma_70_element","synonyms":[{"name":"bacterial RNA polymerase promoter sigma 70","type":"exact"}],"termid":"SO:0001671"}


id: PBO:0017722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial 2-oxoadipate and 2-oxoglutarate transmembrane transporter (predicted)","termid":"PBO:0017722"}


id: PBO:0082818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved NAD+ dependent histone deacetylase of the Sirtuin family; deacetylation targets are primarily nuclear proteins; required for telomere hypercluster formation in quiescent yeast cells; involved in regulation of lifespan; plays roles in silencing at HML, HMR, telomeres, and rDNA; negatively regulates initiation of DNA replication; functions as regulator of autophagy like mammalian homolog SIRT1, and also of mitophagy","termid":"PBO:0082818"}


id: PBO:0043007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich hydrophobic domain 2","termid":"PBO:0043007"}


id: FYPO:0000397
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the duration of progression through the G1/S transition of the mitotic cell cycle is shorter than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased duration of mitotic G1/S phase transition (obsolete FYPO:0000397)","synonyms":[{"name":"cell cycle progression through the G1/S phase transition: increased rate","type":"related"},{"name":"decreased duration of cell cycle progression through mitotic G1/S phase transition","type":"exact"},{"name":"decreased duration of mitotic G1/S phase transition during vegetative growth","type":"exact"},{"name":"increased rate of cell cycle progression through mitotic G1/S phase transition","type":"related"},{"name":"reduced duration of mitotic G1/S phase transition","type":"exact"}],"termid":"FYPO:0000397"}


id: GO:1905213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitotic chromosome condensation.","definition_xrefs":["GOC:TermGenie","PMID:23219725","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"negative regulation of chromosome condensation","termid":"GO:1902340"},{"relation_name":"is_a","term_name":"regulation of mitotic chromosome condensation","termid":"GO:1903379"},{"relation_name":"negatively_regulates","term_name":"mitotic chromosome condensation","termid":"GO:0007076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitotic chromosome condensation","termid":"GO:1905213"}


id: PBO:0082209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-1,3-mannosyltransferase; integral membrane glycoprotein of the Golgi complex, required for addition of alpha1,3-mannose linkages to N-linked and O-linked oligosaccharides, one of five S. cerevisiae proteins of the MNN1 family","termid":"PBO:0082209"}


id: PBO:0044864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 1B","termid":"PBO:0044864"}


id: GO:0039592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with the progression of the host mitotic cell cycle from G2 phase to M phase, leading to arrest in G2 phase. The arrest in G2/M allows some viruses to replicate their genome before cells enter mitosis. Alternatively, it can inhibit the antiviral immune response by preventing the clonal expansion of infected lymphocytes.","definition_xrefs":["PMID:9882364","VZ:876","PMID:12208959","PMID:10946289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cell cycle progression","termid":"GO:0044071"},{"relation_name":"negatively_regulates","term_name":"G2/M transition of mitotic cell cycle","termid":"GO:0000086"},{"relation_name":"regulates","term_name":"G2/M transition of mitotic cell cycle","termid":"GO:0000086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"negatively_regulates","termid":"GO:0044772"}],"interesting_parent_ids":["GO:0044772","GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated arrest of host cell cycle during G2/M transition","synonyms":[{"name":"host G2/M cell cycle arrest by virus","type":"narrow"},{"name":"perturbation by virus of G2/M transition of host mitotic cell cycle","type":"narrow"},{"name":"suppression by virus of G2/M transition of host mitotic cell cycle","type":"narrow"}],"termid":"GO:0039592"}


id: GO:0051996
data:
  {"annotated_genes":["SJAG_02719"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107454],"is_not":false,"summary":null,"term":"GO:0051996"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 (2E,6E)-farnesyl diphosphate + H+ + NAD(P)H = 2 diphosphate + NAD(P)+ + squalene.","definition_xrefs":["EC:2.5.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02719":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016765"],"is_obsolete":false,"name":"squalene synthase [NAD(P)H] activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-191402","Reactome:R-HSA-191405","MetaCyc:RXN66-281"],"synonyms":[{"name":"squalene synthetase activity","type":"related"}],"termid":"GO:0051996","terms_by_termid":{"GO:0051996":null}}


id: PBO:0068094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 401","termid":"PBO:0068094"}


id: GO:0032600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a chemokine receptor out of a membrane raft.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport out of membrane raft","termid":"GO:0032599"},{"relation_name":"is_a","term_name":"chemokine receptor transport within lipid bilayer","termid":"GO:0033606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0061024","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"chemokine receptor transport out of membrane raft","synonyms":[{"name":"chemokine receptor translocation out of membrane raft","type":"exact"},{"name":"chemokine receptor transport out of lipid raft","type":"exact"}],"termid":"GO:0032600"}


id: PBO:0073112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase/reductase family 42E, member 1","termid":"PBO:0073112"}


id: PBO:0088222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP for Cdc42, Rga6","termid":"PBO:0088222"}


id: PBO:0040741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCR pseudogene 7","termid":"PBO:0040741"}


id: GO:0044577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of xylose, an aldopentose, into ethanol.","definition_xrefs":["GOC:tt","PMID:26927067","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethanol metabolic process","termid":"GO:0006067"},{"relation_name":"is_a","term_name":"fermentation","termid":"GO:0006113"},{"relation_name":"is_a","term_name":"D-xylose catabolic process","termid":"GO:0042843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006091","GO:0005975"],"is_obsolete":false,"name":"D-xylose catabolic process to ethanol","synonyms":[{"name":"D-xylose fermentation","type":"exact"},{"name":"xylose catabolism to ethanol","type":"exact"}],"termid":"GO:0044577"}


id: GO:0052105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation by an organism of host processes resulting in the thickening of its cell walls, occurring as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of defense-related host cell wall thickening (obsolete GO:0052105)","synonyms":[{"name":"activation by organism of defense-related host cell wall thickening","type":"exact"},{"name":"activation by organism of host defensive cell wall thickening","type":"exact"},{"name":"activation by symbiont of defense-related host cell wall thickening","type":"exact"},{"name":"induction by organism of defense-related cell wall thickening in other organism involved in symbiotic interaction","type":"broad"},{"name":"induction by organism of host defensive cell wall thickening","type":"exact"},{"name":"positive regulation by organism of defense-related cell wall thickening in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by organism of host defensive cell wall thickening","type":"related"},{"name":"positive regulation by symbiont of defense-related host cell wall thickening","type":"related"},{"name":"stimulation by symbiont of defense-related host cell wall thickening","type":"related"},{"name":"up regulation by symbiont of defense-related host cell wall thickening","type":"related"},{"name":"up-regulation by symbiont of defense-related host cell wall thickening","type":"related"},{"name":"upregulation by symbiont of defense-related host cell wall thickening","type":"related"}],"termid":"GO:0052105"}


id: GO:1904347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of small intestine smooth muscle contraction.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:11991626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gastro-intestinal system smooth muscle contraction","termid":"GO:1904304"},{"relation_name":"regulates","term_name":"small intestine smooth muscle contraction","termid":"GO:1990770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of small intestine smooth muscle contraction","termid":"GO:1904347"}


id: SO:1001267
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1001267 stop_codon_readthrough (obsolete SO:1001267)","termid":"SO:1001267"}


id: PBO:0067506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 646, pseudogene","termid":"PBO:0067506"}


id: PATO:0000776
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000776 memory value (obsolete PATO:0000776)","termid":"PATO:0000776"}


id: PBO:0013125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Luc7","termid":"PBO:0013125"}


id: PBO:0080511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophanyl tRNA synthetase 2 pseudogene 1","termid":"PBO:0080511"}


id: SO:0000066
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000066 gene_by_polyadenylation_attribute (obsolete SO:0000066)","termid":"SO:0000066"}


id: PBO:0004989
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acatalasia","termid":"PBO:0004989"}


id: GO:0043838
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Kdo2-lipid A + phosphatidylethanolamine = phosphoethanolamine-Kdo2-lipid A + diacylglycerol.","definition_xrefs":["PMID:15795227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016780","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase activity","synonyms":[{"name":"EptB","type":"related"},{"name":"phosphoethanolamine transferase","type":"broad"}],"termid":"GO:0043838"}


id: RO:0003001
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a produced_by b iff some process that occurs_in b has_output a.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"produced_by","termid":"RO:0003001"}


id: PBO:0051633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner mitochondrial membrane peptidase subunit 1 pseudogene 3","termid":"PBO:0051633"}


id: GO:1990325
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XXVII) chains. These trimers form thin, non-striated fibrils. Type XXVII collagen triple helices play a role during the calcification of cartilage and the transition of cartilage to bone.","definition_xrefs":["PMID:21421911","GOC:bhm","PMID:17876790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibrillar collagen trimer","termid":"GO:0005583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"collagen type XXVII trimer","termid":"GO:1990325"}


id: PBO:0038493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 4","termid":"PBO:0038493"}


id: SO:0000868
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A frameshift caused by inserting one base.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frameshift","termid":"SO:0000865"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plus_1_frameshift","synonyms":[{"name":"plus 1 frameshift","type":"exact"}],"termid":"SO:0000868"}


id: GO:0005150
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Type I interleukin-1 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-1 receptor binding","termid":"GO:0005149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"interleukin-1, type I receptor binding","synonyms":[{"name":"IL-1 type I","type":"narrow"},{"name":"interleukin-1, type I receptor ligand","type":"narrow"}],"termid":"GO:0005150"}


id: GO:2000884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a glucomannan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide catabolic process","termid":"GO:0000272"},{"relation_name":"is_a","term_name":"glucomannan metabolic process","termid":"GO:0010391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"glucomannan catabolic process","synonyms":[{"name":"glucomannan catabolism","type":"exact"}],"termid":"GO:2000884"}


id: PBO:0076635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transducin beta like 2","termid":"PBO:0076635"}


id: MOD:00296
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-D-glucuronosyl-L-serine.","definition_xrefs":["PubMed:12716131","PubMed:7398618","PubMed:10858503","RESID:AA0291","Unimod:54#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-glucuronylated residue","termid":"MOD:00447"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-D-glucuronosyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(beta-D-glucopyranuronosyl)propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (GlcA) serine","type":"exact"},{"name":"Glucuronyl","type":"related"},{"name":"N-glucuronylation","type":"related"},{"name":"O-D-glucuronosyl-L-serine","type":"exact"},{"name":"O3-D-glucuronosyl-L-serine","type":"exact"}],"termid":"MOD:00296"}


id: GO:0102976
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2S)-versicolorone + NADP+ = 1'-hydroxyversicolorone + H+ + NADPH.","definition_xrefs":["RHEA:35699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"versiconal reductase activity","secondary_identifiers":["MetaCyc:RXN-9491","EC:1.1.1.353"],"termid":"GO:0102976"}


id: GO:0032140
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a single adenine insertion or a deletion that results in an unpaired adenine.","definition_xrefs":["GOC:mah","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single base insertion or deletion binding","termid":"GO:0032138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"single adenine insertion binding","termid":"GO:0032140"}


id: GO:0010409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving extensins, a group of 60-90 kDNA hydroxyproline (Hyp)-rich glycoproteins whose polypeptide backbone consists of many repeats of structural Ser(Hyp)4-6 motifs, with heavily glycosylated 1-4 arabinose residues O-linked to contiguous stretches of Hyp residues, with most of the Ser residues being O-galactosylated.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall hydroxyproline-rich glycoprotein metabolic process","termid":"GO:0010404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"extensin metabolic process","synonyms":[{"name":"extensin metabolism","type":"exact"}],"termid":"GO:0010409"}


id: PATO:0002412
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of yellow and brown hue and low brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"yellow brown","termid":"PATO:0002411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dark yellow brown","termid":"PATO:0002412"}


id: PBO:0065554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E receptor 4 pseudogene 3","termid":"PBO:0065554"}


id: PR:O94652
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nucleoporin GLE1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12960:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin gle1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31E1.05","secondary_identifiers":["UniProtKB:O94652"],"synonyms":[{"name":"RNA export factor gle1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC31E1.05","type":"related"},{"name":"Spom972h-GLE1","type":"exact"},{"name":"nuclear pore protein gle1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94652"}


id: PBO:0044664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"doublecortin","termid":"PBO:0044664"}


id: GO:0047755
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-threo-isocitrate = D-erythro-isocitrate.","definition_xrefs":["EC:5.1.2.6","RHEA:10820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on hydroxy acids and derivatives","termid":"GO:0016856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"isocitrate epimerase activity","secondary_identifiers":["KEGG_REACTION:R02318","MetaCyc:ISOCITRATE-EPIMERASE-RXN"],"synonyms":[{"name":"(1R,2S)-1-hydroxypropane-1,2,3-tricarboxylate 1-epimerase activity","type":"related"}],"termid":"GO:0047755"}


id: GO:0008390
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: testosterone + donor-H2 + O2 = 16-alpha-hydroxytestosterone + H2O.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"testosterone 16-alpha-hydroxylase activity","synonyms":[{"name":"cytochrome P450 CYP2B10","type":"narrow"},{"name":"cytochrome P450 CYP2B9","type":"narrow"},{"name":"cytochrome P450 CYP2D10","type":"narrow"},{"name":"cytochrome P450 CYP2D11","type":"narrow"},{"name":"cytochrome P450 CYP2D9","type":"narrow"}],"termid":"GO:0008390"}


id: PBO:0060161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-RNR2 like 9 (pseudogene)","termid":"PBO:0060161"}


id: FYPO:0001804
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. An inviable phenotype observed in the vegetative growth phase of the life cycle in which a cell lyses, i.e. the plasma membrane ruptures and cytoplasm is lost, during a cellular response to caffeine. Note that in fission yeast cell lysis, the integrity of the cell wall is also compromised.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cell lysis during cellular response to caffeine (obsolete FYPO:0001804)","synonyms":[{"name":"cell lysis during cellular response to caffeine during mitotic cell cycle","type":"related"},{"name":"cell lysis during cellular response to caffeine during vegetative growth","type":"exact"},{"name":"cytolysis during cellular response to caffeine","type":"exact"},{"name":"inviable, lysed cell during cellular response to caffeine","type":"exact"},{"name":"lysed cell in response to caffeine","type":"exact"}],"termid":"FYPO:0001804"}


id: PBO:0052318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1143 pseudogene 2","termid":"PBO:0052318"}


id: GO:0071221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bacterial lipopeptide stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to bacterial lipopeptide","termid":"GO:0070339"},{"relation_name":"is_a","term_name":"cellular response to bacterial lipoprotein","termid":"GO:0071220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to bacterial lipopeptide","termid":"GO:0071221"}


id: GO:1902079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-valine.","definition_xrefs":["GOC:TermGenie","PMID:23085840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"valine catabolic process","termid":"GO:0006574"},{"relation_name":"is_a","term_name":"D-amino acid catabolic process","termid":"GO:0019478"},{"relation_name":"is_a","term_name":"D-valine metabolic process","termid":"GO:1902114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"D-valine catabolic process","synonyms":[{"name":"D-valine breakdown","type":"exact"},{"name":"D-valine catabolism","type":"exact"},{"name":"D-valine degradation","type":"exact"}],"termid":"GO:1902079"}


id: GO:0019708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The synthesis of peptidyl-glycine cholest-5-en-3-beta-ol ester at the carboxy-terminus of autolytically cleaved proteins.","definition_xrefs":["RESID:AA0309"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-glycine cholesteryl ester biosynthesis from peptidyl-glycine (obsolete GO:0019708)","synonyms":[{"name":"peptidyl-glycine cholesteryl ester anabolism from peptidyl-glycine","type":"exact"},{"name":"peptidyl-glycine cholesteryl ester formation from peptidyl-glycine","type":"exact"},{"name":"peptidyl-glycine cholesteryl ester synthesis from peptidyl-glycine","type":"exact"}],"termid":"GO:0019708"}


id: GO:0033331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ent-kaur-16-ene. Ent-kaurene is a tetracyclic diterpenoid that is a precursor of several plant isoprenoids, including gibberellins.","definition_xrefs":["MetaCyc:PWY-5032","PMID:17064690","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene metabolic process","termid":"GO:0042214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"ent-kaurene metabolic process","synonyms":[{"name":"ent-kaurene metabolism","type":"exact"}],"termid":"GO:0033331"}


id: GO:0035349
data:
  {"annotated_genes":["SJAG_03452"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990559"}]},"cv_name":"biological_process","definition":"The process in which coenzyme A is transported across a membrane. Coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, is an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coenzyme A transport","termid":"GO:0015880"},{"relation_name":"is_a","term_name":"purine-containing compound transmembrane transport","termid":"GO:0072530"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03452":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"coenzyme A transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"coenzyme A membrane transport","type":"exact"}],"termid":"GO:0035349","terms_by_termid":{"GO:1990559":null}}


id: PBO:0002950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Usp104","termid":"PBO:0002950"}


id: PBO:0078160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 38-1","termid":"PBO:0078160"}


id: GO:0010585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of glutamine by a cell.","definition_xrefs":["PMID:15208395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamine transport","termid":"GO:0006868"},{"relation_name":"is_a","term_name":"secretion by cell","termid":"GO:0032940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"glutamine secretion","termid":"GO:0010585"}


id: PBO:0072129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 6","termid":"PBO:0072129"}


id: PBO:0055917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A5, pseudogene","termid":"PBO:0055917"}


id: MOD:01824
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfhydryl hydrogen with a Thermo Scientific cysTMT6plex-127 reporter+balance group.","definition_xrefs":["URL:http://www.piercenet.com/files/2162220.pdf","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysTMT6plex reporter+balance reagent cysteine disulfide","termid":"MOD:01821"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysTMT6plex-127 reporter+balance reagent cysteine disulfide","synonyms":[{"name":"S-(2-{3-[2-(2,6-dimethylpiperidin-1-yl)acetamido]propanamido}ethyl)sulfanyl","type":"exact"},{"name":"cysTMT6plex","type":"related"},{"name":"cysteine-reactive Sixplex Tandem Mass Tag(TM)","type":"related"}],"termid":"MOD:01824"}


id: PBO:0050836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoleucyl-tRNA synthetase 1","termid":"PBO:0050836"}


id: PBO:0084105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Haploid specific endoprotease of a-factor mating pheromone; performs one of two N-terminal cleavages during maturation of a-factor mating pheromone; required for axial budding pattern of haploid cells","termid":"PBO:0084105"}


id: PBO:0108683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RabGAP Gyp7","termid":"PBO:0108683"}


id: GO:0042039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of vanadium a metallo-sulfur cluster such as VFe(7-8)S(n).","definition_xrefs":["PMID:11053414"],"gene_count":0,"genotype_count":0,"name":"obsolete vanadium incorporation into metallo-sulfur cluster (obsolete GO:0042039)","synonyms":[{"name":"vanadium incorporation into metallo-sulphur cluster","type":"exact"}],"termid":"GO:0042039"}


id: PBO:0081767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 699","termid":"PBO:0081767"}


id: PBO:0040668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brevican","termid":"PBO:0040668"}


id: PBO:0030561
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_lithium_level","termid":"PBO:0030561"}


id: PBO:0031272
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-DNA_content_increased_during_vegetative_growth","termid":"PBO:0031272"}


id: PBO:0028251
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-branched_septum","termid":"PBO:0028251"}


id: PBO:0074586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 3B","termid":"PBO:0074586"}


id: PBO:0064288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasminogen","termid":"PBO:0064288"}


id: PBO:0050786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 2C","termid":"PBO:0050786"}


id: GO:0140459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a Gram-positive bacterium.","definition_xrefs":["PMID:23664307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to bacterium","termid":"GO:0009617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to Gram-positive bacterium","termid":"GO:0140459"}


id: GO:0032459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein oligomerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"protein complex oligomerization","termid":"GO:0051259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of protein oligomerization","termid":"GO:0032459"}


id: PATO:0000505
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A rhythm quality inhering in a bearer by virtue of the bearer's having rhythm.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhythm quality","termid":"PATO:0000078"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhythmic","termid":"PATO:0000505"}


id: GO:1900877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nonadec-1-ene.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene biosynthetic process","termid":"GO:0043450"},{"relation_name":"is_a","term_name":"nonadec-1-ene metabolic process","termid":"GO:1900876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nonadec-1-ene biosynthetic process","synonyms":[{"name":"nonadec-1-ene anabolism","type":"exact"},{"name":"nonadec-1-ene biosynthesis","type":"exact"},{"name":"nonadec-1-ene formation","type":"exact"},{"name":"nonadec-1-ene synthesis","type":"exact"}],"termid":"GO:1900877"}


id: PBO:0011510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon Dpb3 (predicted)","termid":"PBO:0011510"}


id: _global:similar_in_magnitude_relative_to
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"q1 similar_in_magnitude_relative_to q2 if and only if magnitude(q1) =~ magnitude(q2). Here, magnitude(q) is a function that maps a quality to a unit-invariant scale.","definition_xrefs":["PATOC:CJM"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"similar_in_magnitude_relative_to","termid":"_global:similar_in_magnitude_relative_to"}


id: SO:0001482
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An enhancer that drives the pattern of transcription and binds to the same TF as the primary enhancer, but is located in the intron of or on the far side of a neighboring gene.","definition_xrefs":["PMID:22083793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enhancer","termid":"SO:0000165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shadow_enhancer","synonyms":[{"name":"shadow enhancer","type":"exact"}],"termid":"SO:0001482"}


id: GO:1905571
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds interleukin-10 (IL-10) and that consists of, at a minimum, a dimeric interleukin, an alpha and a beta chain as well as optional additional kinase subunits. The alpha chain binds IL-10 with high affinity and subsequently binds the common beta receptor chain that forms part of multiple interleukin receptors.","definition_xrefs":["PMID:16982608","GOC:TermGenie","GO_REF:0000088","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"interleukin-10 receptor complex","synonyms":[{"name":"IL-10 receptor complex","type":"exact"},{"name":"IL-10-receptor complex","type":"exact"},{"name":"IL10 receptor complex","type":"exact"},{"name":"interleukin-10-receptor complex","type":"exact"}],"termid":"GO:1905571"}


id: PBO:0030495
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-stabilized_iron-sulfur_cluster_binding","termid":"PBO:0030495"}


id: PBO:0061877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oocyte secreted protein 1 pseudogene 1","termid":"PBO:0061877"}


id: GO:0086033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled acetylcholine receptor signaling pathway that contributes to a decrease in frequency or rate of heart contraction. Binding of acetylcholine to a G protein-coupled (muscarinic) receptor on the surface of the signal-receiving cell results in the alpha subunit of a coupled G-protein binding to GTP. This results in the separation of the beta-gamma complex from the alpha subunit. Both the alpha subunit, and the beta-gamma complex can continue to signal to bring about membrane hyperpolarization and a reduction in heart rate.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","Wikipedia:G_protein-gated_ion_channel","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled acetylcholine receptor signaling pathway involved in heart process","termid":"GO:0086093"},{"relation_name":"part_of","term_name":"negative regulation of heart rate by acetylcholine","termid":"GO:0003063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"G protein-coupled acetylcholine receptor signaling pathway involved in negative regulation of heart rate","synonyms":[{"name":"G-protein coupled acetylcholine receptor signaling pathway involved in negative regulation of heart rate","type":"exact"},{"name":"M2 receptor signalling pathway involved in negative regulation of heart rate","type":"exact"},{"name":"muscarinic acetylcholine receptor signaling pathway involved in negative regulation of heart rate","type":"exact"},{"name":"muscarinic receptor signalling pathway involved in negative regulation of heart rate","type":"exact"}],"termid":"GO:0086033"}


id: PBO:0086044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function involved in outer spore wall organization; has similarity to the tafazzins superfamily of acyltransferases","termid":"PBO:0086044"}


id: PBO:0064767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase H pseudogene 1","termid":"PBO:0064767"}


id: PBO:0069874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1161, pseudogene","termid":"PBO:0069874"}


id: GO:0005568
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial rRNA (obsolete GO:0005568)","synonyms":[{"name":"mitochondrial rRNA","type":"exact"}],"termid":"GO:0005568"}


id: PBO:0064876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP1R35 antisense RNA 1","termid":"PBO:0064876"}


id: PBO:0039789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A-Raf proto-oncogene, serine/threonine kinase","termid":"PBO:0039789"}


id: GO:0006132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydrolipoylprotein reduction (obsolete GO:0006132)","synonyms":[{"name":"dihydrolipoylprotein reduction","type":"exact"}],"termid":"GO:0006132"}


id: GO:0048527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the lateral root over time, from its formation to the mature structure. A lateral root is one formed from pericycle cells located on the xylem radius of the root, as opposed to the initiation of the main root from the embryo proper.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic root development","termid":"GO:0048528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral root development","termid":"GO:0048527"}


id: SO:0002152
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that falls downstream of a transcript, but within the genic region of the gene due to alternately transcribed isoforms.","definition_xrefs":["SO:ke","NCBI:dm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_variant","termid":"SO:0001564"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genic_downstream_transcript_variant","synonyms":[{"name":"genic 3 prime transcript variant","type":"exact"},{"name":"genic 3' transcript variant","type":"exact"},{"name":"genic downstream transcript variant","type":"exact"}],"termid":"SO:0002152"}


id: PBO:0085096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear polyadenylated RNA-binding protein; required for export of poly(A)+ mRNA from the nucleus; proposed to couple mRNA export with 3' end processing via its interactions with Mex67p and Pcf11p; interacts with DBP2; inhibits the helicase activity of Dbp2; functionally redundant with Yra2p, another REF family member","termid":"PBO:0085096"}


id: GO:0060203
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a clathrin-sculpted glutamate transport vesicle.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle membrane","termid":"GO:0030658"},{"relation_name":"is_a","term_name":"clathrin-coated vesicle membrane","termid":"GO:0030665"},{"relation_name":"part_of","term_name":"clathrin-sculpted glutamate transport vesicle","termid":"GO:0060199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"clathrin-sculpted glutamate transport vesicle membrane","synonyms":[{"name":"clathrin sculpted glutamate constitutive secretory pathway transport vesicle membrane","type":"exact"},{"name":"clathrin sculpted glutamate transport vesicle membrane","type":"exact"}],"termid":"GO:0060203"}


id: GO:1904031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cyclin-dependent protein kinase activity.","definition_xrefs":["GOC:TermGenie","GOC:als","PMID:22995177","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein kinase activity","termid":"GO:0045860"},{"relation_name":"is_a","term_name":"regulation of cyclin-dependent protein kinase activity","termid":"GO:1904029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of cyclin-dependent protein kinase activity","synonyms":[{"name":"activation of cyclin-dependent protein kinase activity","type":"narrow"},{"name":"up regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"up-regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"upregulation of cyclin-dependent protein kinase activity","type":"exact"}],"termid":"GO:1904031"}


id: PBO:0049550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 12 like","termid":"PBO:0049550"}


id: GO:0050733
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an RS domain of a protein; RS domains are usually highly phosphorylated and characterized by the presence of arginine (R)/serine (S) dipeptides. The RS domain promotes protein-protein interactions and directs subcellular localization and, in certain situations, nucleocytoplasmic shuttling of individual SR proteins. They also play a role in splicing.","definition_xrefs":["PMID:12215544","PMID:11684676"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"RS domain binding","termid":"GO:0050733"}


id: PBO:0055713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM and cysteine rich domains 1","termid":"PBO:0055713"}


id: PBO:0083565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified ORF ASK1","termid":"PBO:0083565"}


id: GO:0140646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the process leading up to expression of the pre-B cell receptor on the surface of pre-B cells.","definition_xrefs":["PMID:22949502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"negatively_regulates","term_name":"pre-B cell receptor expression","termid":"GO:0002330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pre-B cell receptor expression","termid":"GO:0140646"}


id: PBO:0090671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S23","termid":"PBO:0090671"}


id: PBO:0004833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine synthetase","termid":"PBO:0004833"}


id: PBO:0002411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CCHC type zinc finger protein","termid":"PBO:0002411"}


id: GO:1990764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The actin filament-based process in which cytoplasmic actin filaments slide past one another resulting in contraction of a myofibroblast.","definition_xrefs":["PMID:19239477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin-mediated cell contraction","termid":"GO:0070252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myofibroblast contraction","synonyms":[{"name":"MF contraction","type":"exact"},{"name":"MFB contraction","type":"exact"}],"termid":"GO:1990764"}


id: PBO:0002323
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.10","termid":"PBO:0002323"}


id: PBO:0051369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3D-15","termid":"PBO:0051369"}


id: PBO:0047897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(7)(p13)","termid":"PBO:0047897"}


id: GO:1903215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein targeting to mitochondrion.","definition_xrefs":["PMID:21370995","GOC:PARL","GO_REF:0000058","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein targeting to mitochondrion","termid":"GO:1903214"},{"relation_name":"is_a","term_name":"negative regulation of establishment of protein localization to mitochondrion","termid":"GO:1903748"},{"relation_name":"negatively_regulates","term_name":"protein targeting to mitochondrion","termid":"GO:0006626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006605"}],"interesting_parent_ids":["GO:0008150","GO:0006605"],"is_obsolete":false,"name":"negative regulation of protein targeting to mitochondrion","synonyms":[{"name":"down regulation of mitochondrial protein import","type":"related"},{"name":"down regulation of mitochondrial translocation","type":"related"},{"name":"down regulation of protein import into mitochondrion","type":"exact"},{"name":"down regulation of protein targeting to mitochondria","type":"exact"},{"name":"down regulation of protein targeting to mitochondrion","type":"exact"},{"name":"down regulation of protein-mitochondrial targeting","type":"exact"},{"name":"down-regulation of mitochondrial protein import","type":"related"},{"name":"down-regulation of mitochondrial translocation","type":"related"},{"name":"down-regulation of protein import into mitochondrion","type":"exact"},{"name":"down-regulation of protein targeting to mitochondria","type":"exact"},{"name":"down-regulation of protein targeting to mitochondrion","type":"exact"},{"name":"down-regulation of protein-mitochondrial targeting","type":"exact"},{"name":"downregulation of mitochondrial protein import","type":"related"},{"name":"downregulation of mitochondrial translocation","type":"related"},{"name":"downregulation of protein import into mitochondrion","type":"exact"},{"name":"downregulation of protein targeting to mitochondria","type":"exact"},{"name":"downregulation of protein targeting to mitochondrion","type":"exact"},{"name":"downregulation of protein-mitochondrial targeting","type":"exact"},{"name":"inhibition of mitochondrial protein import","type":"related"},{"name":"inhibition of mitochondrial translocation","type":"related"},{"name":"inhibition of protein import into mitochondrion","type":"narrow"},{"name":"inhibition of protein targeting to mitochondria","type":"narrow"},{"name":"inhibition of protein targeting to mitochondrion","type":"narrow"},{"name":"inhibition of protein-mitochondrial targeting","type":"narrow"},{"name":"negative regulation of mitochondrial protein import","type":"related"},{"name":"negative regulation of mitochondrial translocation","type":"related"},{"name":"negative regulation of protein import into mitochondrion","type":"exact"},{"name":"negative regulation of protein targeting to mitochondria","type":"exact"},{"name":"negative regulation of protein-mitochondrial targeting","type":"exact"}],"termid":"GO:1903215"}


id: GO:0045756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the activation, by acetate, of the chemical reactions and pathways resulting in the breakdown of acetate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of initiation of acetate catabolic process by acetate","termid":"GO:0045147"},{"relation_name":"is_a","term_name":"positive regulation of acetate catabolic process","termid":"GO:0045754"},{"relation_name":"is_a","term_name":"positive regulation of response to acetate","termid":"GO:1901459"},{"relation_name":"positively_regulates","term_name":"initiation of acetate catabolic process by acetate","termid":"GO:0045146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"positive regulation of initiation of acetate catabolic process by acetate","synonyms":[{"name":"activation of initiation of acetate catabolic process by acetate","type":"narrow"},{"name":"positive regulation of initiation of acetate breakdown by acetate","type":"exact"},{"name":"positive regulation of initiation of acetate degradation by acetate","type":"exact"},{"name":"stimulation of initiation of acetate catabolic process by acetate","type":"narrow"},{"name":"up regulation of initiation of acetate catabolic process by acetate","type":"exact"},{"name":"up-regulation of initiation of acetate catabolic process by acetate","type":"exact"},{"name":"upregulation of initiation of acetate catabolic process by acetate","type":"exact"}],"termid":"GO:0045756"}


id: GO:1903026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of RNA polymerase II regulatory region sequence-specific DNA binding.","definition_xrefs":["GOC:krc","GOC:TermGenie","GOC:dph","GO_REF:0000059","PMID:20026326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA polymerase II regulatory region sequence-specific DNA binding","termid":"GO:1903025"},{"relation_name":"is_a","term_name":"negative regulation of transcription regulatory region DNA binding","termid":"GO:2000678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of RNA polymerase II regulatory region sequence-specific DNA binding","synonyms":[{"name":"down regulation of RNA polymerase II regulatory region sequence-specific DNA binding","type":"exact"},{"name":"down-regulation of RNA polymerase II regulatory region sequence-specific DNA binding","type":"exact"},{"name":"downregulation of RNA polymerase II regulatory region sequence-specific DNA binding","type":"exact"},{"name":"inhibition of RNA polymerase II regulatory region sequence-specific DNA binding","type":"narrow"}],"termid":"GO:1903026"}


id: PBO:0043395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X9-C motif containing 2","termid":"PBO:0043395"}


id: GO:0005921
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell-cell junction composed of pannexins or innexins and connexins, two different families of channel-forming proteins.","definition_xrefs":["GOC:mah","ISBN:0815332181","GOC:mtg_muscle","PMID:22366062","Wikipedia:Gap_junction"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"gap junction","secondary_identifiers":["NIF_Subcellular:sao118541872"],"synonyms":[{"name":"communicating junction","type":"exact"},{"name":"electrical synapse","type":"related"},{"name":"electrotonic synapse","type":"related"},{"name":"gap junction macula","type":"exact"},{"name":"gap junction plaque","type":"exact"},{"name":"intercellular gap junction channel","type":"related"},{"name":"macula communicans","type":"exact"},{"name":"zonula communicans","type":"exact"}],"termid":"GO:0005921"}


id: FYPO:0003639
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell wall biogenesis is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall biogenesis","termid":"FYPO:0000174"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished cell wall biogenesis","synonyms":[{"name":"abolished fungal-type cell wall biogenesis","type":"exact"},{"name":"fungal-type cell wall biogenesis abolished","type":"exact"}],"termid":"FYPO:0003639"}


id: GO:1902818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ethyl acetate.","definition_xrefs":["GO_REF:0000068","GOC:mengo_curators","GOC:TermGenie","PMID:16013377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate ester metabolic process","termid":"GO:1900619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ethyl acetate metabolic process","synonyms":[{"name":"ethyl acetate metabolism","type":"exact"},{"name":"ethyl ethanoate metabolic process","type":"exact"}],"termid":"GO:1902818"}


id: PBO:0088354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphosphoinositol pentakisphosphate kinase/IP8 pyrophosphatase","termid":"PBO:0088354"}


id: GO:0047337
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dolichyl diphosphate + long-chain-polyphosphate = dolichol-phosphate + long-chain-polyphosphate.","definition_xrefs":["MetaCyc:2.7.4.20-RXN","EC:2.7.4.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"dolichyl-diphosphate-polyphosphate phosphotransferase activity","secondary_identifiers":["RHEA:19417"],"synonyms":[{"name":"dolichyl-diphosphate:polyphosphate phosphotransferase activity","type":"related"},{"name":"dolichylpyrophosphate:polyphosphate phosphotransferase activity","type":"related"}],"termid":"GO:0047337"}


id: PBO:0085290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pex3p interacting protein, required for pexophagy; interacts with Atg8p and Atg11p; mRNA is weakly cell cycle regulated, peaking in G2 phase; YJL185C is a non-essential gene","termid":"PBO:0085290"}


id: PATO:0001956
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability quality inhering in a bearer by virtue of whether the bearer exhibits size variation or change.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variability","termid":"PATO:0001303"},{"relation_name":"towards","term_name":"size","termid":"PATO:0000117"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variability of size","termid":"PATO:0001956"}


id: PBO:0041506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 14 open reading frame 28","termid":"PBO:0041506"}


id: SO:0001743
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence alteration whereby the copy number of a given region is less than the reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copy_number_variation","termid":"SO:0001019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copy_number_loss","synonyms":[{"name":"copy number loss","type":"exact"},{"name":"loss","type":"related"}],"termid":"SO:0001743"}


id: PBO:0002614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cornichon family protein Erv14 (predicted)","termid":"PBO:0002614"}


id: MOD:00359
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to N2-acetyl-L-arginine.","definition_xrefs":["RESID:AA0354","PubMed:12883043","PubMed:1894641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N2-acetyl-L-arginine","synonyms":[{"name":"(S)-2-acetamido-5-carbamimidamidopentanoic acid","type":"exact"},{"name":"2-acetamido-5-guanidinopentanoic acid","type":"exact"},{"name":"2-acetylamino-5-guanidinopentanoic acid","type":"exact"},{"name":"AcArg","type":"exact"},{"name":"MOD_RES N2-acetylarginine","type":"exact"},{"name":"N(alpha)-acetylarginine","type":"exact"},{"name":"N2-acetyl-L-arginine","type":"exact"},{"name":"N2-acetylated L-arginine","type":"exact"},{"name":"acetylarginine","type":"exact"},{"name":"alpha-acetylamino-delta-guanidinovaleric acid","type":"exact"}],"termid":"MOD:00359"}


id: PBO:0084638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mevalonate pyrophosphate decarboxylase; essential enzyme involved in the biosynthesis of isoprenoids and sterols, including ergosterol; acts as a homodimer","termid":"PBO:0084638"}


id: GO:0018118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-cysteine by covalent addition of glutathione to form peptidyl-L-cysteine glutathione disulfide.","definition_xrefs":["RESID:AA0229"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-cysteine glutathione disulfide biosynthetic process from peptidyl-cysteine (obsolete GO:0018118)","synonyms":[{"name":"peptidyl-L-cysteine glutathione disulfide anabolism from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-L-cysteine glutathione disulfide formation from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-L-cysteine glutathione disulfide synthesis from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-L-cysteine glutathione disulphide biosynthesis from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-L-cysteine glutathione disulphide biosynthetic process from peptidyl-cysteine","type":"exact"}],"termid":"GO:0018118"}


id: PBO:0083890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG-nucleoporin component of central core of the nuclear pore complex; also part of the nuclear pore complex (NPC) cytoplasmic filaments; contributes directly to nucleocytoplasmic transport and maintenance of the NPC permeability barrier and is involved in gene tethering at the nuclear periphery; interacts with Gle1p; human homolog NUP42 can complement yeast mutant","termid":"PBO:0083890"}


id: GO:1902704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of hexose to acetone.","definition_xrefs":["PMID:19539744","GOC:TermGenie","GO_REF:0000093","GOC:mengo_curators","PMID:18727018"],"gene_count":0,"genotype_count":0,"name":"obsolete hexose catabolic process to acetone (obsolete GO:1902704)","synonyms":[{"name":"hexose breakdown to acetone","type":"exact"},{"name":"hexose catabolic process to 2-propanone","type":"exact"},{"name":"hexose catabolism to acetone","type":"exact"},{"name":"hexose degradation to acetone","type":"exact"},{"name":"solventogenesis","type":"broad"}],"termid":"GO:1902704"}


id: PBO:0110332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP5PF pseudogene 2","termid":"PBO:0110332"}


id: GO:1901461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to formic acid.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of response to formic acid","termid":"GO:1901460"},{"relation_name":"negatively_regulates","term_name":"response to formic acid","termid":"GO:1901425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to formic acid","synonyms":[{"name":"down regulation of response to formic acid","type":"exact"},{"name":"down-regulation of response to formic acid","type":"exact"},{"name":"downregulation of response to formic acid","type":"exact"},{"name":"inhibition of response to formic acid","type":"narrow"}],"termid":"GO:1901461"}


id: PBO:0076009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress induced phosphoprotein 1","termid":"PBO:0076009"}


id: GO:0048790
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process which maintains the organization and the arrangement of proteins at the active zone to ensure the fusion and docking of vesicles and the release of neurotransmitters.","definition_xrefs":["GOC:dph","GOC:curators","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of synapse structure","termid":"GO:0099558"},{"relation_name":"is_a","term_name":"presynaptic active zone organization","termid":"GO:1990709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of presynaptic active zone structure","synonyms":[{"name":"maintenance of pre-synaptic active zone structure","type":"exact"}],"termid":"GO:0048790"}


id: GO:0150060
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular amylin, or another ligand, combining with an amylin receptor 2 (AMY2), a G protein-coupled receptor complex, on the surface of the target cell. The AMY2 signaling pathway can also be initiated by adrenomedullin (AM/ADM).","definition_xrefs":["PMID:22500019","GOC:bc","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amylin receptor signaling pathway","termid":"GO:0097647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"amylin receptor 2 signaling pathway","synonyms":[{"name":"AMY2 signaling pathway","type":"exact"}],"termid":"GO:0150060"}


id: PBO:0030025
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_adhesion","termid":"PBO:0030025"}


id: PBO:0065230
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRR11 antisense RNA 1","termid":"PBO:0065230"}


id: PBO:0059884
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 7","termid":"PBO:0059884"}


id: PBO:0027598
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_cell_division_site","termid":"PBO:0027598"}


id: GO:0005167
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neurotrophin TRK receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotrophin receptor binding","termid":"GO:0005165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"neurotrophin TRK receptor binding","synonyms":[{"name":"neurotrophin TRK receptor ligand","type":"narrow"}],"termid":"GO:0005167"}


id: GO:0070124
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id: _global:regulates_o_has_participant
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  {"annotation_feature_type":"gene","cv_name":"external","definition":"This is the combination of the regulates relation with the has_participant relation.","definition_xrefs":["GOC:mtg_berkeley_2013"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_o_has_participant","secondary_identifiers":["GOREL:0001016"],"termid":"_global:regulates_o_has_participant"}


id: PBO:0031683
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_peroxisome_degradation","termid":"PBO:0031683"}


id: GO:0016826
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any acid sulfur-nitrogen bond.","definition_xrefs":["EC:3.10.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hydrolase activity, acting on acid sulfur-nitrogen bonds","synonyms":[{"name":"hydrolase activity, acting on acid sulphur-nitrogen bonds","type":"exact"}],"termid":"GO:0016826"}


id: PBO:0084854
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; mutation confers increased replicative lifespan","termid":"PBO:0084854"}


id: PBO:0076007
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STIMATE-MUSTN1 readthrough","termid":"PBO:0076007"}


id: PBO:0049259
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"goosecoid homeobox","termid":"PBO:0049259"}


id: PATO:0002340
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  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of being minutely hispid.","definition_xrefs":["PATOC:DD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hispid","termid":"PATO:0002339"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hispidulous","termid":"PATO:0002340"}


id: GO:0002940
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  {"annotated_genes":["SJAG_04181","SJAG_00886"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100253,103396],"is_not":false,"summary":null,"term":"GO:0002940"}]},"cv_name":"biological_process","definition":"The process whereby a guanine in a tRNA is methylated at the N2 position of guanine.","definition_xrefs":["ISBN:155581073X","ISBN:1555811337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methylation","termid":"GO:0030488"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00886":null,"SJAG_04181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"tRNA N2-guanine methylation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tRNA m2-guanine biosynthesis","type":"related"}],"termid":"GO:0002940","terms_by_termid":{"GO:0002940":null}}


id: PBO:0052849
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 4-5","termid":"PBO:0052849"}


id: PBO:0042685
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT enhancer binding protein zeta","termid":"PBO:0042685"}


id: PBO:0050951
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon beta 1","termid":"PBO:0050951"}


id: PBO:0012232
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vps20 associated protein Vts1 (predicted)","termid":"PBO:0012232"}


id: PBO:0053465
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 427","termid":"PBO:0053465"}


id: GO:0035146
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id: GO:1901605
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id: PBO:0026818
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_punctate_nuclear_protein_localization","termid":"PBO:0026818"}


id: MOD:01153
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an methylsulfanyl group (thiomethyl group).","definition_xrefs":["Unimod:39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiolated residue","termid":"MOD:01886"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylthiolated residue","synonyms":[{"name":"Beta-methylthiolation","type":"related"},{"name":"Methylthio","type":"related"}],"termid":"MOD:01153"}


id: PBO:0113475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of tRNA-specific adenosine-34 deaminase; forms a heterodimer with Tad2p that converts adenosine to inosine at the wobble position of several tRNAs; localizes to cytosol, nucleus and peroxisomes","termid":"PBO:0113475"}


id: FYPO:0005091
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding at a pombe cell cycle box (PCB) by a gene product is normal (i.e. indistinguishable from wild type). The relevant gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription regulatory region sequence-specific DNA binding","termid":"FYPO:0007382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000653"}],"interesting_parent_ids":["FYPO:0000653","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal DNA binding at PCB","synonyms":[{"name":"normal DNA binding at pombe cell cycle box","type":"exact"},{"name":"normal PCB DNA binding","type":"exact"},{"name":"normal RNA polymerase II proximal promoter sequence-specific DNA binding at PCB","type":"exact"}],"termid":"FYPO:0005091"}


id: PBO:0090243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp7","termid":"PBO:0090243"}


id: GO:0071287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a manganese ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to manganese ion","termid":"GO:0010042"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to manganese ion","synonyms":[{"name":"cellular response to manganese","type":"exact"}],"termid":"GO:0071287"}


id: PBO:0083504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF ARG81/YML099C","termid":"PBO:0083504"}


id: PBO:0063423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE4B antisense RNA 1","termid":"PBO:0063423"}


id: PBO:0065052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3B pseudogene 6","termid":"PBO:0065052"}


id: PBO:0073746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 3 pseudogene 2","termid":"PBO:0073746"}


id: GO:0036378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Conversion of vitamin D3 from its largely inactive form (calciol, also called cholecalciferol) into a hormonally active form (calcitriol). Conversion requires 25-hydroxylation of calciol in the liver to form calcidiol, and subsequent 1,alpha-hydroxylation of calcidiol in the kidney to form calcitriol.","definition_xrefs":["PMID:17426122","PMID:20511049","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin D biosynthetic process","termid":"GO:0042368"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"vitamin D3 metabolic process","termid":"GO:0070640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0006766","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"calcitriol biosynthetic process from calciol","synonyms":[{"name":"1alpha,25(OH)2D3 biosynthesis","type":"broad"},{"name":"1alpha,25-dihydroxycholecalciferol biosynthesis","type":"broad"},{"name":"1alpha,25-dihydroxyvitamin D3 biosynthesis","type":"broad"},{"name":"calcitriol biosynthesis from calciol","type":"exact"},{"name":"vitamin D3 activation","type":"exact"}],"termid":"GO:0036378"}


id: GO:0034899
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N,N,N-trimethylamine + NADPH + H+ + O2 = N,N,N-trimethylamine N-oxide + NADP+ + H2O.","definition_xrefs":["EC:1.14.13.148","UM-BBD_reactionID:r1407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"trimethylamine monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R05623","RHEA:31979"],"termid":"GO:0034899"}


id: PR:O14044
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein PNO1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01774","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-rRNA-processing protein pno1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2C4.11c","secondary_identifiers":["UniProtKB:O14044"],"synonyms":[{"name":"Spom972h-PNO1","type":"exact"},{"name":"ribosomal RNA-processing protein 28 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14044"}


id: PBO:0003752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L7 (predicted)","termid":"PBO:0003752"}


id: GO:0005231
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts, where channel opening contributes to an increase in membrane potential.","definition_xrefs":["ISBN:0323037070","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular ligand-gated monoatomic ion channel activity","termid":"GO:0005230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"excitatory extracellular ligand-gated monoatomic ion channel activity","secondary_identifiers":["Reactome:R-HSA-399712","Reactome:R-HSA-399711","Reactome:R-HSA-420980","Reactome:R-HSA-432164","Reactome:R-HSA-438037"],"termid":"GO:0005231"}


id: PBO:0067493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 628, pseudogene","termid":"PBO:0067493"}


id: GO:0150061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular amylin, or another ligand, combining with an amylin receptor 3 (AMY3), a G protein-coupled receptor complex, on the surface of the target cell. The AMY3 signaling pathway can also be initiated by the amyloid-beta complex. AMY3 signaling results in increased import of calcium ions into the cytosol across plasma membrane, increased phosphorylation of ERK1/2, Act, and a PKA regulatory subunit II, as well as increased expression of cFos.","definition_xrefs":["PMID:22500019","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amylin receptor signaling pathway","termid":"GO:0097647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"amylin receptor 3 signaling pathway","synonyms":[{"name":"AMY3 signaling pathway","type":"exact"}],"termid":"GO:0150061"}


id: GO:0035981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a tongue muscle cell.","definition_xrefs":["PMID:3393851","CL:0002673","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle fiber differentiation","termid":"GO:0098528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tongue muscle cell differentiation","termid":"GO:0035981"}


id: PBO:0031386
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glucan_synthesis","termid":"PBO:0031386"}


id: GO:0004645
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,4-alpha-D-glucosyl(n) + phosphate = 1,4-alpha-D-glucosyl(n-1) + alpha-D-glucose 1-phosphate.","definition_xrefs":["RHEA:41732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"1,4-alpha-oligoglucan phosphorylase activity","secondary_identifiers":["EC:2.4.1.1","MetaCyc:RXN0-5184"],"synonyms":[{"name":"1,4-alpha-D-glucan:phosphate alpha-D-glucosyltransferase activity","type":"related"},{"name":"1,4-alpha-glucan phosphorylase activity","type":"related"},{"name":"alpha-glucan phosphorylase","type":"broad"},{"name":"amylopectin phosphorylase","type":"narrow"},{"name":"amylophosphorylase activity","type":"narrow"},{"name":"glucan phosphorylase","type":"narrow"},{"name":"glucosan phosphorylase","type":"narrow"},{"name":"granulose phosphorylase","type":"narrow"},{"name":"muscle phosphorylase","type":"narrow"},{"name":"muscle phosphorylase a and b activity","type":"narrow"},{"name":"myophosphorylase","type":"narrow"},{"name":"polyphosphorylase activity","type":"related"},{"name":"potato phosphorylase","type":"narrow"},{"name":"starch phosphorylase","type":"narrow"}],"termid":"GO:0004645"}


id: PBO:0053765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1010","termid":"PBO:0053765"}


id: GO:0071109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the superior temporal gyrus over time, from its formation to the mature structure. The superior temporal gyrus is a portion of the cerebral cortex that extends from the lateral sulcus to the superior temporal sulcus.","definition_xrefs":["GOC:mah","GOC:BHF","FMA:61905","PMID:11484000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"cerebral cortex development","termid":"GO:0021987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior temporal gyrus development","termid":"GO:0071109"}


id: PBO:0081661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF584 divergent transcript","termid":"PBO:0081661"}


id: PBO:0056120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYR motif containing 7","termid":"PBO:0056120"}


id: GO:0045866
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of genetic recombination within the DNA of the genes coding for ribosomal RNA.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of recombination within rDNA repeats (obsolete GO:0045866)","synonyms":[{"name":"positive regulation of recombination within rDNA repeats","type":"exact"}],"termid":"GO:0045866"}


id: PBO:0064810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP1R2C family member C","termid":"PBO:0064810"}


id: GO:1903236
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of leukocyte tethering or rolling.","definition_xrefs":["GOC:als","GO_REF:0000058","GOC:TermGenie","PMID:18308860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular extravasation","termid":"GO:0002691"},{"relation_name":"is_a","term_name":"regulation of leukocyte adhesion to vascular endothelial cell","termid":"GO:1904994"},{"relation_name":"regulates","term_name":"leukocyte tethering or rolling","termid":"GO:0050901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of leukocyte tethering or rolling","termid":"GO:1903236"}


id: PBO:0063158
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired box 4","termid":"PBO:0063158"}


id: GO:1905305
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiac myofibril assembly.","definition_xrefs":["GOC:rl","GO_REF:0000058","GOC:TermGenie","PMID:16151019","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"is_a","term_name":"negative regulation of organelle assembly","termid":"GO:1902116"},{"relation_name":"is_a","term_name":"negative regulation of supramolecular fiber organization","termid":"GO:1902904"},{"relation_name":"is_a","term_name":"regulation of cardiac myofibril assembly","termid":"GO:1905304"},{"relation_name":"is_a","term_name":"negative regulation of cardiac muscle cell differentiation","termid":"GO:2000726"},{"relation_name":"negatively_regulates","term_name":"cardiac myofibril assembly","termid":"GO:0055003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0044085","GO:0007010","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac myofibril assembly","synonyms":[{"name":"down regulation of cardiac myofibril assembly","type":"exact"},{"name":"down regulation of cardiac myofibril development","type":"exact"},{"name":"down regulation of cardiac myofibril morphogenesis","type":"exact"},{"name":"down regulation of heart myofibril assembly","type":"related"},{"name":"down-regulation of cardiac myofibril assembly","type":"exact"},{"name":"down-regulation of cardiac myofibril development","type":"exact"},{"name":"down-regulation of cardiac myofibril morphogenesis","type":"exact"},{"name":"down-regulation of heart myofibril assembly","type":"related"},{"name":"downregulation of cardiac myofibril assembly","type":"exact"},{"name":"downregulation of cardiac myofibril development","type":"exact"},{"name":"downregulation of cardiac myofibril morphogenesis","type":"exact"},{"name":"downregulation of heart myofibril assembly","type":"related"},{"name":"inhibition of cardiac myofibril assembly","type":"narrow"},{"name":"inhibition of cardiac myofibril development","type":"narrow"},{"name":"inhibition of cardiac myofibril morphogenesis","type":"narrow"},{"name":"inhibition of heart myofibril assembly","type":"related"},{"name":"negative regulation of cardiac myofibril development","type":"exact"},{"name":"negative regulation of cardiac myofibril morphogenesis","type":"exact"},{"name":"negative regulation of heart myofibril assembly","type":"related"}],"termid":"GO:1905305"}


id: PBO:0073936
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 17 member 8","termid":"PBO:0073936"}


id: PBO:0062450
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 117 pseudogene","termid":"PBO:0062450"}


id: PBO:0016067
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contractile ring myosin V regulator Rng8","termid":"PBO:0016067"}


id: FYPO:0004240
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 56 of histone H3 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3 acetylation during vegetative growth","termid":"FYPO:0002362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0002494","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"decreased histone H3-K56 acetylation during vegetative growth","synonyms":[{"name":"decreased histone H3-K56 acetylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K56 acetylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K56 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004240"}


id: PBO:0109026
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3102","termid":"PBO:0109026"}


id: GO:0034488
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id: PBO:0004093
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  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.6.2.4","termid":"PBO:0004093"}


id: PBO:0027593
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_tyrosine_phosphorylation_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0027593"}


id: PBO:0073520
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain binding protein 2","termid":"PBO:0073520"}


id: GO:0008903
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxypyruvate = 2-hydroxy-3-oxopropanoate.","definition_xrefs":["RHEA:11952","EC:5.3.1.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"hydroxypyruvate isomerase activity","secondary_identifiers":["KEGG_REACTION:R01394","MetaCyc:RXN0-305"],"synonyms":[{"name":"hydroxypyruvate aldose-ketose-isomerase activity","type":"related"},{"name":"hydroxypyruvate ketol-isomerase activity","type":"related"}],"termid":"GO:0008903"}


id: GO:1904241
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id: GO:0009894
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degradation","type":"exact"}],"termid":"GO:0009894","terms_by_termid":{"GO:0000288":null,"GO:0000289":null,"GO:0000290":null,"GO:0006110":null,"GO:0010506":null,"GO:0010507":null,"GO:0010508":null,"GO:0016239":null,"GO:0016242":null,"GO:0032434":null,"GO:0032435":null,"GO:0032436":null,"GO:0036450":null,"GO:0042176":null,"GO:0043456":null,"GO:0043488":null,"GO:0045732":null,"GO:0045820":null,"GO:0048255":null,"GO:0060211":null,"GO:0060213":null,"GO:0061013":null,"GO:0061136":null,"GO:0061157":null,"GO:0061158":null,"GO:0070935":null,"GO:0071042":null,"GO:0090669":null,"GO:0120271":null,"GO:0120272":null,"GO:0140501":null,"GO:1901098":null,"GO:1901800":null,"GO:1902369":null,"GO:1902373":null,"GO:1903599":null,"GO:1904293":null,"GO:1904352":null,"GO:1905785":null,"GO:1905786":null,"GO:1905857":null,"GO:1990074":null,"GO:2000786":null,"GO:2000815":null,"GO:2001172":null}}


id: PBO:0072752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100A11 pseudogene 2","termid":"PBO:0072752"}


id: PBO:0078159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 37 (pseudogene)","termid":"PBO:0078159"}


id: PBO:0067918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 220","termid":"PBO:0067918"}


id: PBO:0040710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 like 15","termid":"PBO:0040710"}


id: PBO:0046989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 87 member A","termid":"PBO:0046989"}


id: PATO:0001095
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001095 force value (obsolete PATO:0001095)","termid":"PATO:0001095"}


id: PBO:0082123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acidic protein of the mitochondrial matrix; binds unassembled large subunit proteins during ribosome assembly; subunit of a complex containing Mrx6p, Pim1p, and Pet20p that may regulate mtDNA replication; related to the human complement receptor gC1q-R","termid":"PBO:0082123"}


id: GO:0009130
data:
  {"annotated_genes":["SJAG_00964","SJAG_04487","SJAG_04354","SJAG_03164","SJAG_03708","SJAG_04627","SJAG_04709","SJAG_04713","SJAG_00533","SJAG_03771","SJAG_00197","SJAG_00694","SJAG_00444"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85483,89451,94573,112898,108065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[67046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[104509,85409],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[95066,104510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"},{"annotations":[111075,87992,84487,88997,83503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrimidine nucleoside monophosphate, a compound consisting of a pyrimidine base linked to a ribose or deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate biosynthetic process","termid":"GO:0009124"},{"relation_name":"is_a","term_name":"pyrimidine nucleoside monophosphate metabolic process","termid":"GO:0009129"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00444":null,"SJAG_00533":null,"SJAG_00694":null,"SJAG_00964":null,"SJAG_03164":null,"SJAG_03708":null,"SJAG_03771":null,"SJAG_04354":null,"SJAG_04487":null,"SJAG_04627":null,"SJAG_04709":null,"SJAG_04713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyrimidine nucleoside monophosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"pyrimidine nucleoside monophosphate anabolism","type":"exact"},{"name":"pyrimidine nucleoside monophosphate biosynthesis","type":"exact"},{"name":"pyrimidine nucleoside monophosphate formation","type":"exact"},{"name":"pyrimidine nucleoside monophosphate synthesis","type":"exact"}],"termid":"GO:0009130","terms_by_termid":{"GO:0006226":null,"GO:0006231":null,"GO:0009224":null,"GO:0044205":null,"GO:0044206":null}}


id: SO:0100001
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a peptide that is involved in a biochemical function.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_motif","termid":"SO:0001067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"biochemical_region_of_peptide","synonyms":[{"name":"biochemical motif","type":"exact"},{"name":"biochemical region of peptide","type":"exact"},{"name":"biochemical_region","type":"related"}],"termid":"SO:0100001"}


id: PBO:0071649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 13","termid":"PBO:0071649"}


id: PBO:0005124
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set1 mediated H3 K4 methylation is preferentially enriched at euchromatic loci","termid":"PBO:0005124"}


id: PBO:0054932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2346","termid":"PBO:0054932"}


id: PBO:0061128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuromedin B receptor","termid":"PBO:0061128"}


id: GO:0140975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption of a cellular component of another organism, leading to damage or temporary subversion of that structure. In some cases this can cause malfunctioning of the cells and death of the target organism.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disruption of anatomical structure in another organism","termid":"GO:0141060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"disruption of cellular anatomical structure in another organism","synonyms":[{"name":"disruption of cellular component of another organism","type":"broad"}],"termid":"GO:0140975"}


id: PBO:0061246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide synthase 1","termid":"PBO:0061246"}


id: PBO:0059214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRN complex interacting protein","termid":"PBO:0059214"}


id: PR:O43071
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-processing factor 17 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03361","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-processing factor 17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC6B1.10","secondary_identifiers":["UniProtKB:O43071"],"synonyms":[{"name":"Spom972h-CDC40","type":"exact"}],"termid":"PR:O43071"}


id: PBO:0110462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACO2 pseudogene 1","termid":"PBO:0110462"}


id: PBO:0043070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor muscarinic 4","termid":"PBO:0043070"}


id: GO:0031407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any oxylipin, any of a group of biologically active compounds formed by oxidative metabolism of polyunsaturated fatty acids.","definition_xrefs":["PMID:11960741","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"oxylipin metabolic process","synonyms":[{"name":"oxylipin metabolism","type":"exact"}],"termid":"GO:0031407"}


id: PBO:0002787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urease Ure2","termid":"PBO:0002787"}


id: GO:0052025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of the host endomembrane system. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host membrane","termid":"GO:0141171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host cell endomembrane system","synonyms":[{"name":"disruption by symbiont of host cell membrane","type":"broad"},{"name":"modification by symbiont of host cell membrane","type":"broad"},{"name":"symbiont-mediated disruption of host cell membrane","type":"broad"},{"name":"symbiont-mediated perturbation of host cell membrane","type":"broad"}],"termid":"GO:0052025"}


id: PR:O14130
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3C7.04 gene.","definition_xrefs":["UniProtKB:O14130","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C3C7.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.04","synonyms":[{"name":"Spom972h-SPAC3C7.04","type":"exact"}],"termid":"PR:O14130"}


id: PBO:0044158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTD small phosphatase like","termid":"PBO:0044158"}


id: GO:0019686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which a purine nucleoside is synthesized from another purine nucleoside.","definition_xrefs":["GOC:mah","ISBN:0306444747","ISBN:0471394831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing small molecule interconversion","termid":"GO:0015949"},{"relation_name":"is_a","term_name":"purine nucleoside metabolic process","termid":"GO:0042278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"purine nucleoside interconversion","termid":"GO:0019686"}


id: GO:0042780
data:
  {"annotated_genes":["SJAG_04885","SJAG_01704","SJAG_00195","SJAG_03761","SJAG_02288","SJAG_00997","SJAG_02993"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88176,89050,94555,94556,95018,106036],"is_not":false,"summary":null,"term":"GO:0042780"},{"annotations":[79067,83771,114105,106035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990180"},{"annotations":[114106,83772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001680"}]},"cv_name":"biological_process","definition":"The process in which the 3' end of a pre-tRNA molecule is converted to that of a mature tRNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA processing","termid":"GO:0008033"},{"relation_name":"is_a","term_name":"RNA 3'-end processing","termid":"GO:0031123"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00195":null,"SJAG_00997":null,"SJAG_01704":null,"SJAG_02288":null,"SJAG_02993":null,"SJAG_03761":null,"SJAG_04885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"tRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"tRNA 3' processing","type":"exact"}],"termid":"GO:0042780","terms_by_termid":{"GO:0001680":null,"GO:0042780":null,"GO:1990180":null}}


id: PBO:0034390
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_eggs_laid_in_by","termid":"PBO:0034390"}


id: PBO:0000755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human thyroid receptor interacting protein homolog, transcription coactivator (predicted)","termid":"PBO:0000755"}


id: PBO:0048655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein delta 4","termid":"PBO:0048655"}


id: GO:0051536
data:
  {"annotated_genes":["SJAG_04736","SJAG_01630","SJAG_00260","SJAG_03658","SJAG_00217","SJAG_02895","SJAG_03243","SJAG_04016","SJAG_03322","SJAG_01417","SJAG_04098","SJAG_03588","SJAG_03553","SJAG_02994","SJAG_00244","SJAG_02497","SJAG_00995","SJAG_03701","SJAG_05027","SJAG_02261","SJAG_02818","SJAG_02016","SJAG_04756","SJAG_02495","SJAG_05280","SJAG_04085","SJAG_04183","SJAG_02627","SJAG_01644","SJAG_04639","SJAG_01574","SJAG_00601","SJAG_03862","SJAG_00822","SJAG_01841","SJAG_01058","SJAG_00186","SJAG_04397","SJAG_00532","SJAG_01935","SJAG_03222","SJAG_00153","SJAG_04054","SJAG_02908","SJAG_04265","SJAG_00792","SJAG_00455","SJAG_03724","SJAG_02474"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84899,87678,88992,89222,90108,93227,99510,103003,114041],"is_not":false,"summary":null,"term":"GO:0051536"},{"annotations":[90103,110260,89221,103545,84098,106000,111214,84851,100607,86718,97696,91096,112815,88990,110038,96569,105382,110900,114040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051537"},{"annotations":[84852,97617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051538"},{"annotations":[91515,105383,95389,96911,95012,100880,103482,101693,105846,105249,92743,90907,110923,107735,109981,106001,96116,101365,92201,88197,83804,108841,110261,101449,94148,109611,90499,100275,84853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051539"}]},"cv_name":"molecular_function","definition":"Binding to an iron-sulfur cluster, a combination of iron and sulfur atoms.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal cluster binding","termid":"GO:0051540"}],"gene_count":49,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00186":null,"SJAG_00217":null,"SJAG_00244":null,"SJAG_00260":null,"SJAG_00455":null,"SJAG_00532":null,"SJAG_00601":null,"SJAG_00792":null,"SJAG_00822":null,"SJAG_00995":null,"SJAG_01058":null,"SJAG_01417":null,"SJAG_01574":null,"SJAG_01630":null,"SJAG_01644":null,"SJAG_01841":null,"SJAG_01935":null,"SJAG_02016":null,"SJAG_02261":null,"SJAG_02474":null,"SJAG_02495":null,"SJAG_02497":null,"SJAG_02627":null,"SJAG_02818":null,"SJAG_02895":null,"SJAG_02908":null,"SJAG_02994":null,"SJAG_03222":null,"SJAG_03243":null,"SJAG_03322":null,"SJAG_03553":null,"SJAG_03588":null,"SJAG_03658":null,"SJAG_03701":null,"SJAG_03724":null,"SJAG_03862":null,"SJAG_04016":null,"SJAG_04054":null,"SJAG_04085":null,"SJAG_04098":null,"SJAG_04183":null,"SJAG_04265":null,"SJAG_04397":null,"SJAG_04639":null,"SJAG_04736":null,"SJAG_04756":null,"SJAG_05027":null,"SJAG_05280":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"iron-sulfur cluster binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Fe/S binding","type":"exact"},{"name":"iron sulfur cluster binding","type":"exact"},{"name":"iron sulphur cluster binding","type":"exact"},{"name":"iron-sulphur cluster binding","type":"exact"}],"termid":"GO:0051536","terms_by_termid":{"GO:0051536":null,"GO:0051537":null,"GO:0051538":null,"GO:0051539":null}}


id: PBO:0000386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication pre-initiation complex subunit Sld3","termid":"PBO:0000386"}


id: PBO:0027770
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_recombination_frequency","termid":"PBO:0027770"}


id: PBO:0041926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromobox 1 pseudogene 1","termid":"PBO:0041926"}


id: PBO:0016540
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetrameric","termid":"PBO:0016540"}


id: GO:0015291
data:
  {"annotated_genes":["SJAG_00057","SJAG_03606","SJAG_01406","SJAG_03401","SJAG_04673","SJAG_00276","SJAG_04616","SJAG_01145","SJAG_00547","SJAG_04068","SJAG_00275","SJAG_01872","SJAG_03960","SJAG_04714","SJAG_02958","SJAG_03608","SJAG_04698","SJAG_01960","SJAG_04406","SJAG_02463","SJAG_00612","SJAG_02780","SJAG_02050","SJAG_03820","SJAG_00233","SJAG_04241","SJAG_04096","SJAG_01541","SJAG_01059","SJAG_02779","SJAG_01033","SJAG_03951","SJAG_04028","SJAG_00339","SJAG_04506","SJAG_03595","SJAG_04905","SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113202,89372,85011,89137,92553,108410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015297"},{"annotations":[107039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005471"},{"annotations":[98960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"},{"annotations":[111728,94407,86734,87225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015369"},{"annotations":[74938,72132,88513,113385,106791,110331,110337,99091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005351"},{"annotations":[87803],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071913"},{"annotations":[113389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"},{"annotations":[96763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034216"},{"annotations":[97745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015366"},{"annotations":[91825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005364"},{"annotations":[87226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010486"},{"annotations":[88595,94118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005366"},{"annotations":[111960,112683,100736,90083,105839,99900,108879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005315"},{"annotations":[101820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015379"},{"annotations":[85352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015386"},{"annotations":[106261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008271"},{"annotations":[85353,92806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015385"},{"annotations":[107109],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005452"},{"annotations":[88086,88080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015295"},{"annotations":[97748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097434"},{"annotations":[91826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008506"},{"annotations":[108417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005371"},{"annotations":[84483,91591],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015505"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy, not direct ATP coupling. Secondary active transporters include symporters and antiporters.","definition_xrefs":["PMID:10839820","ISBN:0198506732","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"active transmembrane transporter activity","termid":"GO:0022804"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_00233":null,"SJAG_00275":null,"SJAG_00276":null,"SJAG_00339":null,"SJAG_00547":null,"SJAG_00612":null,"SJAG_01033":null,"SJAG_01059":null,"SJAG_01145":null,"SJAG_01183":null,"SJAG_01406":null,"SJAG_01541":null,"SJAG_01872":null,"SJAG_01960":null,"SJAG_02050":null,"SJAG_02463":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_02958":null,"SJAG_03401":null,"SJAG_03595":null,"SJAG_03606":null,"SJAG_03608":null,"SJAG_03820":null,"SJAG_03951":null,"SJAG_03960":null,"SJAG_04028":null,"SJAG_04068":null,"SJAG_04096":null,"SJAG_04241":null,"SJAG_04406":null,"SJAG_04506":null,"SJAG_04616":null,"SJAG_04673":null,"SJAG_04698":null,"SJAG_04714":null,"SJAG_04905":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"secondary active transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0015570","GO:0015404","TC:2.A","GO:0015353","GO:0015290"],"synonyms":[{"name":"active transporter","type":"broad"},{"name":"coupled carrier","type":"exact"},{"name":"electrochemical potential-driven transporter activity","type":"exact"},{"name":"energizer of outer membrane receptor-mediated transport activity","type":"narrow"},{"name":"galactose/glucose (methylgalactoside) porter activity","type":"related"},{"name":"heavy metal ion porter activity","type":"narrow"},{"name":"ion-gradient-driven energizer activity","type":"narrow"},{"name":"multidrug endosomal transmembrane transporter activity","type":"narrow"},{"name":"nitrite/nitrate porter activity","type":"narrow"},{"name":"porter activity","type":"exact"},{"name":"porters","type":"exact"},{"name":"secondary carrier-type facilitators","type":"exact"}],"termid":"GO:0015291","terms_by_termid":{"GO:0005315":null,"GO:0005351":null,"GO:0005358":null,"GO:0005364":null,"GO:0005366":null,"GO:0005371":null,"GO:0005452":null,"GO:0005471":null,"GO:0008271":null,"GO:0008506":null,"GO:0010486":null,"GO:0015295":null,"GO:0015297":null,"GO:0015366":null,"GO:0015369":null,"GO:0015379":null,"GO:0015385":null,"GO:0015386":null,"GO:0015505":null,"GO:0034216":null,"GO:0071913":null,"GO:0097434":null,"GO:0140987":null}}


id: GO:0090048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of transcription regulator activity, any molecular function that plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor.","definition_xrefs":["GOC:rl","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription regulator activity (obsolete GO:0090048)","synonyms":[{"name":"negative regulation of transcription regulator activity","type":"exact"}],"termid":"GO:0090048"}


id: GO:0031297
data:
  {"annotated_genes":["SJAG_02214","SJAG_03728","SJAG_02439","SJAG_05237","SJAG_03097","SJAG_00177","SJAG_01832","SJAG_01374","SJAG_05180","SJAG_02294","SJAG_04183","SJAG_02992","SJAG_02198","SJAG_01572","SJAG_02822","SJAG_01076","SJAG_02724","SJAG_01185","SJAG_03780","SJAG_00727","SJAG_01044","SJAG_02079","SJAG_02465","SJAG_04272","SJAG_00935","SJAG_05012","SJAG_02698","SJAG_01677","SJAG_01221","SJAG_01584","SJAG_05372","SJAG_02299","SJAG_03300","SJAG_00623","SJAG_04971","SJAG_03843","SJAG_01410","SJAG_03898"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85203,85630,86978,90652,92070,92234,93566,95143,95362,95455,96733,97257,97609,100271,101855,102749,103888,104281,104649,105219,108671,108672,110443,112984,113286,113625],"is_not":false,"summary":null,"term":"GO:0031297"},{"annotations":[90867,92233,92067,105217,112983,95141,95025,103887,108669,85201,105686,86975,94325,103863,91115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990426"},{"annotations":[112595,102244,85033],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0120292"},{"annotations":[108673,100272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071932"},{"annotations":[85204,85631,105688,87559,106100,95144,92752,95027,92235,112985,110444,111680],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120290"}]},"cv_name":"biological_process","definition":"The process in which a DNA replication fork that has stalled is restored to a functional state and replication is restarted. The stalling may be due to DNA damage, DNA secondary structure, bound proteins, dNTP shortage, or other causes.","definition_xrefs":["GOC:vw","PMID:11459955","PMID:15367656","PMID:17660542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated DNA replication maintenance of fidelity","termid":"GO:0045005"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00177":null,"SJAG_00623":null,"SJAG_00727":null,"SJAG_00935":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01185":null,"SJAG_01221":null,"SJAG_01374":null,"SJAG_01410":null,"SJAG_01572":null,"SJAG_01584":null,"SJAG_01677":null,"SJAG_01832":null,"SJAG_02079":null,"SJAG_02198":null,"SJAG_02214":null,"SJAG_02294":null,"SJAG_02299":null,"SJAG_02439":null,"SJAG_02465":null,"SJAG_02698":null,"SJAG_02724":null,"SJAG_02822":null,"SJAG_02992":null,"SJAG_03097":null,"SJAG_03300":null,"SJAG_03728":null,"SJAG_03780":null,"SJAG_03843":null,"SJAG_03898":null,"SJAG_04183":null,"SJAG_04272":null,"SJAG_04971":null,"SJAG_05012":null,"SJAG_05180":null,"SJAG_05237":null,"SJAG_05372":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006260","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"replication fork processing","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0034065"],"synonyms":[{"name":"collapsed replication fork processing","type":"exact"},{"name":"recovery from replication fork arrest","type":"exact"},{"name":"recovery from replication fork arrest at rDNA locus","type":"narrow"},{"name":"recovery from replication fork stalling","type":"exact"},{"name":"recovery from replication fork stalling at rDNA locus","type":"narrow"},{"name":"replication fork processing at rDNA locus","type":"narrow"},{"name":"replication fork processing at ribosomal DNA locus","type":"narrow"},{"name":"replication fork restart","type":"related"},{"name":"replication restart","type":"related"}],"termid":"GO:0031297","terms_by_termid":{"GO:0031297":null,"GO:0071932":null,"GO:0120290":null,"GO:0120292":null,"GO:1990426":null}}


id: PBO:0054654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2059","termid":"PBO:0054654"}


id: PR:Q9USP3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppr6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USP3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat-containing protein 6, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC11E10.04","synonyms":[{"name":"Spom972h-ppr6","type":"exact"}],"termid":"PR:Q9USP3"}


id: PBO:0070388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhophilin associated tail protein 1 like","termid":"PBO:0070388"}


id: PBO:0018162
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe SYntaxin-like protein","termid":"PBO:0018162"}


id: PATO:0001074
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001074 absolute impulse (obsolete PATO:0001074)","termid":"PATO:0001074"}


id: FYPO:0008073
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the assembly of a RITS complex in the vegetative growth phase of the life cycle is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:19394293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal RITS complex assembly","termid":"FYPO:0008073"}


id: GO:0042166
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to acetylcholine, an acetic acid ester of the organic base choline that functions as a neurotransmitter, released at the synapses of parasympathetic nerves and at neuromuscular junctions.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"acetylcholine binding","termid":"GO:0042166"}


id: PBO:0054045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1386","termid":"PBO:0054045"}


id: GO:0160054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of microfibril.","definition_xrefs":["PMID:32855533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"microfibril assembly","termid":"GO:0160054"}


id: GO:0046513
data:
  {"annotated_genes":["SJAG_01219","SJAG_01057","SJAG_02085","SJAG_02842","SJAG_04178","SJAG_02305"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87926,88807,101658,104948,105849,106211],"is_not":false,"summary":null,"term":"GO:0046513"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ceramides, any N-acylated sphingoid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ceramide metabolic process","termid":"GO:0006672"},{"relation_name":"is_a","term_name":"sphingolipid biosynthetic process","termid":"GO:0030148"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01057":null,"SJAG_01219":null,"SJAG_02085":null,"SJAG_02305":null,"SJAG_02842":null,"SJAG_04178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"ceramide biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ceramide anabolism","type":"exact"},{"name":"ceramide biosynthesis","type":"exact"},{"name":"ceramide formation","type":"exact"},{"name":"ceramide synthesis","type":"exact"}],"termid":"GO:0046513","terms_by_termid":{"GO:0046513":null}}


id: PBO:0076982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THADA armadillo repeat containing","termid":"PBO:0076982"}


id: PBO:0055842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRIG2 divergent transcript","termid":"PBO:0055842"}


id: GO:1902081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of calcium ion import into sarcoplasmic reticulum.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:TermGenie","PMID:8349590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"negative regulation of calcium ion transport","termid":"GO:0051926"},{"relation_name":"is_a","term_name":"regulation of calcium ion import into sarcoplasmic reticulum","termid":"GO:1902080"},{"relation_name":"negatively_regulates","term_name":"calcium ion import into sarcoplasmic reticulum","termid":"GO:1990036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of calcium ion import into sarcoplasmic reticulum","synonyms":[{"name":"down regulation of calcium ion import into sarcoplasmic reticulum","type":"exact"},{"name":"down-regulation of calcium ion import into sarcoplasmic reticulum","type":"exact"},{"name":"downregulation of calcium ion import into sarcoplasmic reticulum","type":"exact"},{"name":"inhibition of calcium ion import into sarcoplasmic reticulum","type":"narrow"}],"termid":"GO:1902081"}


id: PBO:0051687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INKA2 antisense RNA 1","termid":"PBO:0051687"}


id: PBO:0081334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF133 antisense RNA 1","termid":"PBO:0081334"}


id: PBO:0063973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 7","termid":"PBO:0063973"}


id: PR:O13779
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17A2.14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal ion transporter C17A12.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A2.14","synonyms":[{"name":"Spom972h-SPAC17A2.14","type":"exact"}],"termid":"PR:O13779"}


id: PBO:0016045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"queuine tRNA-ribosyltransferase Qtrt1","termid":"PBO:0016045"}


id: PBO:0082623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of both the Rpd3S and Rpd3L histone deacetylase complexes; negative regulator of meiosis; required for repression of a subset of meiotic genes during vegetative growth, binding of histone deacetylase Rpd3p required for activity, contains a NEE box and a WD repeat motif; homologous with Wtm1p; UME1 has a paralog, WTM2, that arose from the whole genome duplication","termid":"PBO:0082623"}


id: PBO:0030965
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_trimethylation_at_centromere","termid":"PBO:0030965"}


id: GO:0061623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of galactose into pyruvate, with the concomitant production of a small amount of ATP.","definition_xrefs":["GOC:dph","ISBN:0201090910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose catabolic process","termid":"GO:0019388"},{"relation_name":"is_a","term_name":"glycolytic process through glucose-1-phosphate","termid":"GO:0061622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0005975","GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glycolytic process from galactose","termid":"GO:0061623"}


id: GO:0100003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates sodium ion transport.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of sodium ion transport by transcription from RNA polymerase II promoter (obsolete GO:0100003)","termid":"GO:0100003"}


id: FYPO:0000478
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the meiotic nuclear divisions are normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal meiosis","synonyms":[{"name":"meiosis: normal","type":"related"},{"name":"normal meiotic nuclear division","type":"exact"}],"termid":"FYPO:0000478"}


id: PBO:0061930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily K member 1","termid":"PBO:0061930"}


id: SO:0001893
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature ablation whereby the deleted region includes a transcript feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_ablation","termid":"SO:0001879"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_ablation","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"Jannovar:transcript_ablation","type":"exact"},{"name":"VEP:transcript_ablation","type":"exact"},{"name":"transcript ablation","type":"exact"}],"termid":"SO:0001893"}


id: GO:0018741
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a primary linear alkyl sulfate ester + H2O = a primary alcohol + H+ + sulfate.","definition_xrefs":["RHEA:67908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"linear primary-alkylsulfatase activity","secondary_identifiers":["EC:3.1.6.21","UM-BBD_reactionID:r0602"],"synonyms":[{"name":"alkyl sulfatase activity","type":"broad"}],"termid":"GO:0018741"}


id: FYPO:0002170
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is elongated and branched (and septated), and undergoes two or more rounds of cell division and then dies.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, elongated cell","termid":"FYPO:0002262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000004","FYPO:0000005"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, branched, elongated cell","synonyms":[{"name":"inviable after spore germination, multiple cell divisions, elongated and branched cell","type":"exact"},{"name":"inviable following spore germination, multiple cell divisions, branched, elongated cell","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, branched, elongated cell","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, branched, elongated cell","type":"exact"}],"termid":"FYPO:0002170"}


id: GO:0160128
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an inorganic ion by a channel that opens in response to a change in proton concentration (pH).","definition_xrefs":["PMID:17167423","PMID:29513651"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand-gated monoatomic ion channel activity","termid":"GO:0015276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"pH-gated monoatomic ion channel activity","secondary_identifiers":["Wikipedia:Acid-sensing_ion_channel","Reactome:R-HSA-2671885"],"synonyms":[{"name":"acid-sensing ion channel activity","type":"related"},{"name":"proton-gated ion channel activity","type":"exact"}],"termid":"GO:0160128"}


id: GO:0072062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the S1 cells of the kidney as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in kidney development","termid":"GO:0061005"},{"relation_name":"part_of","term_name":"proximal convoluted tubule segment 1 development","termid":"GO:0072031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal convoluted tubule segment 1 cell differentiation","synonyms":[{"name":"S1 cell differentiation","type":"exact"}],"termid":"GO:0072062"}


id: MOD:01466
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:15939799","Unimod:302#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"menadione quinone derivative","termid":"MOD:00621"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"menadione quinone derivative - site C","synonyms":[{"name":"Menadione","type":"related"},{"name":"Menadione quinone derivative","type":"related"}],"termid":"MOD:01466"}


id: GO:0002127
data:
  {"annotated_genes":["SJAG_05249","SJAG_02099"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84299,89968],"is_not":false,"summary":null,"term":"GO:0002127"}]},"cv_name":"biological_process","definition":"The process in which the base of cytosine at position 34 in the anticodon of a tRNA is post-transcriptionally methylated at the C5 position.","definition_xrefs":["GOC:hjd","ISBN:155581073X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA wobble cytosine modification","termid":"GO:0002101"},{"relation_name":"is_a","term_name":"tRNA C5-cytosine methylation","termid":"GO:0002946"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02099":null,"SJAG_05249":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"tRNA wobble base cytosine methylation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"wobble position m5C biosynthesis","type":"exact"}],"termid":"GO:0002127","terms_by_termid":{"GO:0002127":null}}


id: PBO:0051358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2/OR22-3 (pseudogene)","termid":"PBO:0051358"}


id: GO:0072330
data:
  {"annotated_genes":["SJAG_01946","SJAG_02988","SJAG_02885","SJAG_01238","SJAG_03526","SJAG_01300","SJAG_04674","SJAG_04972","SJAG_01356","SJAG_02717","SJAG_00673","SJAG_05200","SJAG_03313","SJAG_03632","SJAG_01935","SJAG_02769","SJAG_02796","SJAG_03786","SJAG_04404","SJAG_03553","SJAG_03943","SJAG_03180","SJAG_00099","SJAG_02007","SJAG_03198","SJAG_01458","SJAG_00043","SJAG_04107","SJAG_04988","SJAG_03972","SJAG_03679","SJAG_02106","SJAG_00305","SJAG_04481","SJAG_03130","SJAG_00630"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019413"},{"annotations":[110259,75013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009102"},{"annotations":[93751,98139,87463,93384,96823,91053,108654,94342,94434,84153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006633"},{"annotations":[101999,107467,94277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030497"},{"annotations":[87964,85536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034625"},{"annotations":[85537,87965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019367"},{"annotations":[95464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034276"},{"annotations":[60504,58889,59959,62003,108962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019249"},{"annotations":[93234,108839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009107"},{"annotations":[93752,96824,100438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042759"},{"annotations":[107406],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045717"},{"annotations":[93754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900535"},{"annotations":[109528,84925,94809,94813,98855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015940"},{"annotations":[94347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042866"},{"annotations":[69198,110562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006636"},{"annotations":[87968,102001,107468,99582,85539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042761"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of monocarboxylic acids, any organic acid containing one carboxyl (-COOH) group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_00099":null,"SJAG_00305":null,"SJAG_00630":null,"SJAG_00673":null,"SJAG_01238":null,"SJAG_01300":null,"SJAG_01356":null,"SJAG_01458":null,"SJAG_01935":null,"SJAG_01946":null,"SJAG_02007":null,"SJAG_02106":null,"SJAG_02717":null,"SJAG_02769":null,"SJAG_02796":null,"SJAG_02885":null,"SJAG_02988":null,"SJAG_03130":null,"SJAG_03180":null,"SJAG_03198":null,"SJAG_03313":null,"SJAG_03526":null,"SJAG_03553":null,"SJAG_03632":null,"SJAG_03679":null,"SJAG_03786":null,"SJAG_03943":null,"SJAG_03972":null,"SJAG_04107":null,"SJAG_04404":null,"SJAG_04481":null,"SJAG_04674":null,"SJAG_04972":null,"SJAG_04988":null,"SJAG_05200":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"monocarboxylic acid biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"monocarboxylic acid anabolism","type":"exact"},{"name":"monocarboxylic acid biosynthesis","type":"exact"},{"name":"monocarboxylic acid formation","type":"exact"},{"name":"monocarboxylic acid synthesis","type":"exact"}],"termid":"GO:0072330","terms_by_termid":{"GO:0006633":null,"GO:0006636":null,"GO:0009102":null,"GO:0009107":null,"GO:0015940":null,"GO:0019249":null,"GO:0019367":null,"GO:0019413":null,"GO:0030497":null,"GO:0034276":null,"GO:0034625":null,"GO:0042759":null,"GO:0042761":null,"GO:0042866":null,"GO:0045717":null,"GO:1900535":null}}


id: PBO:0058323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4696","termid":"PBO:0058323"}


id: PBO:0070334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 6","termid":"PBO:0070334"}


id: GO:0001819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of production of a cytokine.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of cytokine production","secondary_identifiers":["GO:0042108","GO:0050715"],"synonyms":[{"name":"activation of cytokine production","type":"narrow"},{"name":"positive regulation of cytokine biosynthetic process","type":"narrow"},{"name":"positive regulation of cytokine secretion","type":"narrow"},{"name":"stimulation of cytokine production","type":"narrow"},{"name":"up regulation of cytokine production","type":"exact"},{"name":"up-regulation of cytokine production","type":"exact"},{"name":"upregulation of cytokine production","type":"exact"}],"termid":"GO:0001819"}


id: PBO:0066665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHO family interacting cell polarization regulator 2","termid":"PBO:0066665"}


id: GO:0010749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of nitric oxide mediated signal transduction. Nitric oxide mediated signal transduction is The series of molecular signals mediated by the detection of nitric oxide (NO).","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"nitric oxide mediated signal transduction","termid":"GO:0007263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of nitric oxide mediated signal transduction","synonyms":[{"name":"regulation of nitric oxide-mediated signal transduction","type":"exact"}],"termid":"GO:0010749"}


id: GO:0097393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of telomeric repeat-containing RNA from a DNA template. A telomere is a complex of DNA and proteins that seals the end of a chromosome.","definition_xrefs":["GOC:al","PMID:22139915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"telomeric repeat-containing RNA transcription","synonyms":[{"name":"TERRA transcription","type":"exact"}],"termid":"GO:0097393"}


id: GO:0031605
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The subunits forming the outer ring of the core complex of a proteasome located in the endoplasmic reticulum of a cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ER proteasome core complex, alpha-subunit complex (obsolete GO:0031605)","termid":"GO:0031605"}


id: GO:0045594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ovarian cumulus cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"regulation of cumulus cell differentiation","termid":"GO:0045592"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"cumulus cell differentiation","termid":"GO:0001549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cumulus cell differentiation","synonyms":[{"name":"activation of cumulus cell differentiation","type":"narrow"},{"name":"positive regulation of ovarian cumulus cell differentiation","type":"exact"},{"name":"stimulation of cumulus cell differentiation","type":"narrow"},{"name":"up regulation of cumulus cell differentiation","type":"exact"},{"name":"up-regulation of cumulus cell differentiation","type":"exact"},{"name":"upregulation of cumulus cell differentiation","type":"exact"}],"termid":"GO:0045594"}


id: PBO:0071190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 31","termid":"PBO:0071190"}


id: PBO:0068102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 409","termid":"PBO:0068102"}


id: PBO:0029781
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_vegetative_cell_with_abnormal_septum","termid":"PBO:0029781"}


id: PBO:0048305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 15","termid":"PBO:0048305"}


id: PATO:0002402
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Multiple lesions some interconnecting with each other.","definition_xrefs":["PATOC:MPATH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multi-localised","termid":"PATO:0001791"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multifocal to coalescing","termid":"PATO:0002402"}


id: GO:0050643
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-deacetylbaccatin III + acetyl-CoA = baccatin III + CoA.","definition_xrefs":["RHEA:20137","EC:2.3.1.167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"10-deacetylbaccatin III 10-O-acetyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.167-RXN","KEGG_REACTION:R06311"],"synonyms":[{"name":"acetyl-CoA:taxan-10beta-ol O-acetyltransferase","type":"broad"}],"termid":"GO:0050643"}


id: PBO:0064551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 13, pseudogene","termid":"PBO:0064551"}


id: GO:0001845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the fusion of a phagosome, a vesicle formed by phagocytosis, with a lysosome.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosome organization","termid":"GO:0007040"},{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"},{"relation_name":"part_of","term_name":"phagocytosis","termid":"GO:0006909"},{"relation_name":"part_of","term_name":"phagosome maturation","termid":"GO:0090382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0044085","GO:0016192"],"is_obsolete":false,"name":"phagolysosome assembly","synonyms":[{"name":"late phagosome biosynthesis","type":"related"},{"name":"late phagosome formation","type":"related"},{"name":"phagolysosome formation","type":"related"}],"termid":"GO:0001845"}


id: PBO:0018220
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression","termid":"PBO:0018220"}


id: GO:0046124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any one of a family of organic molecules consisting of a purine base covalently bonded to a sugar deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside catabolic process","termid":"GO:0006152"},{"relation_name":"is_a","term_name":"deoxyribonucleoside catabolic process","termid":"GO:0046121"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside metabolic process","termid":"GO:0046122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"purine deoxyribonucleoside catabolic process","synonyms":[{"name":"purine deoxyribonucleoside breakdown","type":"exact"},{"name":"purine deoxyribonucleoside catabolism","type":"exact"},{"name":"purine deoxyribonucleoside degradation","type":"exact"}],"termid":"GO:0046124"}


id: GO:1900363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mRNA polyadenylation.","definition_xrefs":["GOC:se","GOC:TermGenie","PMID:15121841"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mRNA polyadenylation (obsolete GO:1900363)","synonyms":[{"name":"regulation of cleavage and polyadenylylation specificity factor activity","type":"narrow"},{"name":"regulation of mRNA polyadenylylation","type":"exact"}],"termid":"GO:1900363"}


id: GO:0010133
data:
  {"annotated_genes":["SJAG_01903","SJAG_02235"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103245,114184],"is_not":false,"summary":null,"term":"GO:0010133"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of proline into other compounds, including glutamate.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate metabolic process","termid":"GO:0006536"},{"relation_name":"is_a","term_name":"proline catabolic process","termid":"GO:0006562"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01903":null,"SJAG_02235":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"proline catabolic process to glutamate","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0019494","MetaCyc:PROUT-PWY"],"synonyms":[{"name":"proline breakdown to glutamate","type":"exact"},{"name":"proline degradation to glutamate","type":"exact"},{"name":"proline oxidation","type":"related"}],"termid":"GO:0010133","terms_by_termid":{"GO:0010133":null}}


id: PBO:0044178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catenin beta interacting protein 1","termid":"PBO:0044178"}


id: PBO:0053219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin like","termid":"PBO:0053219"}


id: GO:0021610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the facial nerve is generated and organized. This sensory and motor nerve supplies the muscles of facial expression and the expression and taste at the anterior two-thirds of the tongue. The principal branches are the superficial ophthalmic, buccal, palatine and hyomandibular. The main trunk synapses within pterygopalatine ganglion in the parotid gland and this ganglion then gives of nerve branches which supply the lacrimal gland and the mucous secreting glands of the nasal and oral cavities.","definition_xrefs":["GOC:jid","GOC:cls","GO_REF:0000021","GOC:dgh","GOC:dph","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"facial nerve development","termid":"GO:0021561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"facial nerve morphogenesis","synonyms":[{"name":"CN VII morphogenesis","type":"related"}],"termid":"GO:0021610"}


id: PBO:0088812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall alpha-1,3-glucan synthase Mok11","termid":"PBO:0088812"}


id: GO:0016980
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: creatine + H2O = sarcosine + urea.","definition_xrefs":["RHEA:22456","EC:3.5.3.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"creatinase activity","secondary_identifiers":["MetaCyc:CREATINASE-RXN","KEGG_REACTION:R01566"],"synonyms":[{"name":"creatine amidinohydrolase activity","type":"related"}],"termid":"GO:0016980"}


id: GO:1901101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving gramicidin S.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00102"],"gene_count":0,"genotype_count":0,"name":"obsolete gramicidin S metabolic process (obsolete GO:1901101)","synonyms":[{"name":"gramicidin S metabolism","type":"exact"}],"termid":"GO:1901101"}


id: PBO:0065755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen phosphorylase, muscle associated","termid":"PBO:0065755"}


id: GO:0045260
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A proton-transporting ATP synthase complex found in the plasma membrane. Examples of this component are found in Bacterial species.","definition_xrefs":["ISBN:0198547684","GOC:mah","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane proton-transporting ATP synthase complex (obsolete GO:0045260)","synonyms":[{"name":"hydrogen-translocating F-type ATPase complex","type":"broad"},{"name":"hydrogen-transporting ATP synthase","type":"exact"},{"name":"plasma membrane hydrogen-translocating F-type ATPase complex","type":"exact"},{"name":"proton-transporting ATP synthase complex","type":"broad"}],"termid":"GO:0045260"}


id: GO:0018387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The oxidative deamination of N-terminal peptidyl-cysteine, or peptidyl-serine, to form pyruvic acid with an amide bond between its 1-carboxyl group and the N-terminal residue.","definition_xrefs":["RESID:AA0127"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-amino acid deamination to pyruvic acid (obsolete GO:0018387)","termid":"GO:0018387"}


id: PR:000044734
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the cdc12 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 12 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC1F5.04c","synonyms":[{"name":"Spom-cdc12","type":"exact"}],"termid":"PR:000044734"}


id: GO:0047650
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O-alkylglycerone + ATP = O-alkylglycerone phosphate + ADP + 2 H+.","definition_xrefs":["RHEA:23088","EC:2.7.1.84"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"alkylglycerone kinase activity","secondary_identifiers":["KEGG_REACTION:R03944","MetaCyc:ALKYLGLYCERONE-KINASE-RXN"],"synonyms":[{"name":"ATP:O-alkylglycerone phosphotransferase activity","type":"related"},{"name":"alkyldihydroxyacetone kinase (phosphorylating)","type":"related"},{"name":"alkyldihydroxyacetone kinase activity","type":"related"}],"termid":"GO:0047650"}


id: PBO:0047374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 5","termid":"PBO:0047374"}


id: PBO:0068737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5A small nuclear 8, pseudogene","termid":"PBO:0068737"}


id: PBO:0056911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MER1 repeat containing imprinted transcript 1","termid":"PBO:0056911"}


id: GO:0044355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A defense process that protects an organism from invading foreign DNA.","definition_xrefs":["GO:jl","PMID:20062055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clearance of foreign intracellular nucleic acids","termid":"GO:0099046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"clearance of foreign intracellular DNA","secondary_identifiers":["GO:0044356"],"synonyms":[{"name":"clearance of foreign intracellular DNA by conversion of DNA cytidine to uridine","type":"narrow"}],"termid":"GO:0044355"}


id: GO:0061129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of directed movement of a motile cell or organism up a concentration gradient of 3',5'-cAMP by the action of DIF-2. DIF-2 is a chlorinated alkylphenone.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of positive chemotaxis to cAMP by DIF-2","termid":"GO:0061121"},{"relation_name":"is_a","term_name":"negative regulation of positive chemotaxis to cAMP by chlorinated alkylphenone","termid":"GO:0061125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of positive chemotaxis to cAMP by DIF-2","termid":"GO:0061129"}


id: PBO:0053835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1100","termid":"PBO:0053835"}


id: PBO:0046637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 18","termid":"PBO:0046637"}


id: PBO:0063071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyamine oxidase","termid":"PBO:0063071"}


id: PBO:0078098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 6A","termid":"PBO:0078098"}


id: GO:1903805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-valine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:TermGenie","GO_REF:0000075","PMID:23895341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"L-valine transmembrane transport","termid":"GO:1903785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"L-valine import across plasma membrane","secondary_identifiers":["GO:0090468"],"synonyms":[{"name":"L-valine import into cell","type":"exact"},{"name":"valine import","type":"narrow"}],"termid":"GO:1903805"}


id: SO:0000991
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA located in the genome and able to be transmitted to the offspring.","definition_xrefs":["BCS:etrwz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA","termid":"SO:0000352"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genomic_DNA","synonyms":[{"name":"gDNA","type":"exact"},{"name":"genomic DNA","type":"exact"}],"termid":"SO:0000991"}


id: GO:0061201
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of the clathrin-sculpted gamma-aminobutyric acid transport vesicle.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"clathrin-sculpted gamma-aminobutyric acid transport vesicle","termid":"GO:0061200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"clathrin-sculpted gamma-aminobutyric acid transport vesicle lumen","synonyms":[{"name":"clathrin sculpted GABA transport vesicle lumen","type":"exact"},{"name":"clathrin sculpted gamma-aminobutyric acid transport vesicle lumen","type":"exact"}],"termid":"GO:0061201"}


id: PBO:0044135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTBP2 pseudogene 1","termid":"PBO:0044135"}


id: GO:0034602
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + CoA + NAD+ = succinyl-CoA + CO2 + NADH.","definition_xrefs":["RHEA:27786","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxoglutarate dehydrogenase [NAD(P)+] activity","termid":"GO:0034601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxoglutarate dehydrogenase (NAD+) activity","secondary_identifiers":["MetaCyc:2OXOGLUTARATEDEH-RXN","EC:1.2.1.105","Reactome:R-HSA-71037","KEGG_REACTION:R08549","Reactome:R-HSA-71401"],"termid":"GO:0034602"}


id: PBO:0065352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN13 like Y-linked pseudogene 2","termid":"PBO:0065352"}


id: PBO:0062489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily B member 5 pseudogene","termid":"PBO:0062489"}


id: PBO:0011087
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae URA1","termid":"PBO:0011087"}


id: SO:0000538
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Recombination signal including V-heptamer, V-spacer and V-nonamer in 3' of V-region of a V-gene or V-sequence of an immunoglobulin/T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_signal_feature","termid":"SO:0000939"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_gene_recombination_feature","synonyms":[{"name":"V gene recombination feature","type":"exact"},{"name":"V-RS","type":"exact"}],"termid":"SO:0000538"}


id: PBO:0012285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ric8 family guanine nucleotide exchange factor synembryn family","termid":"PBO:0012285"}


id: GO:0070873
data:
  {"annotated_genes":["SJAG_01376","SJAG_00963"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86958,77630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045719"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving glycogen.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide metabolic process","termid":"GO:0032881"},{"relation_name":"is_a","term_name":"regulation of generation of precursor metabolites and energy","termid":"GO:0043467"},{"relation_name":"regulates","term_name":"glycogen metabolic process","termid":"GO:0005977"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00963":null,"SJAG_01376":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0006091","GO:0008150"],"is_obsolete":false,"name":"regulation of glycogen metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of glycogen metabolism","type":"exact"}],"termid":"GO:0070873","terms_by_termid":{"GO:0045719":null}}


id: PBO:0040800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BHLHE22 antisense RNA 1","termid":"PBO:0040800"}


id: PBO:0058641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6770-3","termid":"PBO:0058641"}


id: PBO:0062062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily Z member 1","termid":"PBO:0062062"}


id: GO:0097600
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A xylanase activity that acts on one of the ends of a xylan polymer which does not contain side chains.","definition_xrefs":["GOC:jh2","ISBN:81-7736-269-0","PMID:16535010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylanase activity","termid":"GO:0097599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"exoxylanase activity","termid":"GO:0097600"}


id: PR:Q50HP4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dad4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q50HP4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit dad4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.22c","synonyms":[{"name":"Spom972h-dad4","type":"exact"},{"name":"outer kinetochore protein dad4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q50HP4"}


id: GO:0141159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal acidification of host phagosomes. Mechanisms by which a symbiont prevents host phagosome acidification include the inhibitition of host V-ATPase, the proton pump that acidifies the phagosome, or disruption of the phagosome membrane by pore-forming toxin. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:20333253","PMID:22087003","PMID:33505976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host phagosome acidification","termid":"GO:0141159"}


id: PBO:0044186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTP synthase 2","termid":"PBO:0044186"}


id: PBO:0063983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 17","termid":"PBO:0063983"}


id: GO:1904874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of telomerase RNA localization to Cajal body.","definition_xrefs":["PMID:25467444","GOC:BHF","GO_REF:0000058","GOC:BHF_telomere","GOC:nc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of telomerase RNA localization to Cajal body","termid":"GO:1904872"},{"relation_name":"positively_regulates","term_name":"telomerase RNA localization to Cajal body","termid":"GO:0090671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of telomerase RNA localization to Cajal body","synonyms":[{"name":"activation of telomerase RNA localization to Cajal body","type":"narrow"},{"name":"up regulation of telomerase RNA localization to Cajal body","type":"exact"},{"name":"up-regulation of telomerase RNA localization to Cajal body","type":"exact"},{"name":"upregulation of telomerase RNA localization to Cajal body","type":"exact"}],"termid":"GO:1904874"}


id: GO:0102499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: hydrogenphosphate + a plant soluble heteroglycan = alpha-D-glucose 1-phosphate + a plant soluble heteroglycan.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete SHG alpha-glucan phosphorylase activity (obsolete GO:0102499)","termid":"GO:0102499"}


id: PBO:0042171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular communication network factor 2","termid":"PBO:0042171"}


id: GO:0005292
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of lysine from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"high-affinity basic amino acid transmembrane transporter activity","termid":"GO:0005287"},{"relation_name":"is_a","term_name":"L-lysine transmembrane transporter activity","termid":"GO:0015189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"high-affinity lysine transmembrane transporter activity","synonyms":[{"name":"high affinity lysine transmembrane transporter activity","type":"exact"},{"name":"high affinity lysine transporter activity","type":"broad"}],"termid":"GO:0005292"}


id: PBO:0043373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clustered mitochondria homolog pseudogene 3","termid":"PBO:0043373"}


id: PBO:0016080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit beta 7, Pre4 (predicted)","termid":"PBO:0016080"}


id: GO:0070141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a UV-A radiation stimulus. UV-A radiation (UV-A light) spans the wavelengths 315 to 400 nm.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to UV","termid":"GO:0009411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to UV-A","synonyms":[{"name":"response to UV-A light stimulus","type":"exact"},{"name":"response to UV-A radiation stimulus","type":"exact"},{"name":"response to UVA light stimulus","type":"exact"},{"name":"response to UVA radiation stimulus","type":"exact"}],"termid":"GO:0070141"}


id: GO:0098703
data:
  {"annotated_genes":["SJAG_01090","SJAG_00296","SJAG_05229","SJAG_04668","SJAG_03631","SJAG_04551","SJAG_02877"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88370,88423,95710,110593],"is_not":false,"summary":null,"term":"GO:0098703"},{"annotations":[87240,109517],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905949"},{"annotations":[98240],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"The directed movement of calcium ions from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion import","termid":"GO:0070509"},{"relation_name":"is_a","term_name":"calcium ion transmembrane import into cytosol","termid":"GO:0097553"},{"relation_name":"is_a","term_name":"inorganic cation import across plasma membrane","termid":"GO:0098659"},{"relation_name":"is_a","term_name":"calcium ion import into cytosol","termid":"GO:1902656"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_01090":null,"SJAG_02877":null,"SJAG_03631":null,"SJAG_04551":null,"SJAG_04668":null,"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"calcium ion import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1990035"],"synonyms":[{"name":"calcium ion import into cell","type":"exact"},{"name":"calcium ion uptake into cell","type":"exact"}],"termid":"GO:0098703","terms_by_termid":{"GO:0098703":null,"GO:1905665":null,"GO:1905949":null}}


id: GO:0032678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-9 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-9 production","termid":"GO:0032638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-9 production","secondary_identifiers":["GO:0045417"],"synonyms":[{"name":"regulation of IL-9 production","type":"exact"},{"name":"regulation of interleukin-9 biosynthetic process","type":"narrow"}],"termid":"GO:0032678"}


id: GO:0005229
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of chloride by a channel that opens in response to stimulus by a calcium ion or ions. Transport by a channel involves catalysis of facilitated diffusion of a solute (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel, without evidence for a carrier-mediated mechanism.","definition_xrefs":["GOC:mtg_transport","PMID:29236691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloride channel activity","termid":"GO:0005254"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic anion channel activity","termid":"GO:0099095"},{"relation_name":"is_a","term_name":"intracellularly calcium-gated channel activity","termid":"GO:0141147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"intracellularly calcium-gated chloride channel activity","secondary_identifiers":["Reactome:R-HSA-2684901","Reactome:R-HSA-2744242","Reactome:R-HSA-9659568","Reactome:R-HSA-2744361"],"synonyms":[{"name":"intracellular calcium activated chloride channel activity","type":"exact"}],"termid":"GO:0005229"}


id: PBO:0049330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIF subunit 2","termid":"PBO:0049330"}


id: PBO:0042319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD38 molecule","termid":"PBO:0042319"}


id: GO:0010333
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"terpene synthase activity","termid":"GO:0010333"}


id: PBO:0065479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMD14 pseudogene 1","termid":"PBO:0065479"}


id: PBO:0089460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex platform subcomplex scaffold WD repeat subunit Apc4/Cut20","termid":"PBO:0089460"}


id: PBO:0079060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon TAC) 1-1","termid":"PBO:0079060"}


id: PBO:0070109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 23 pseudogene","termid":"PBO:0070109"}


id: GO:0019116
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-hydroxynicotine + H2O + O2 = 1-(6-hydroxypyrid-3-yl)-4-(methylamino)butan-1-one + hydrogen peroxide.","definition_xrefs":["GOC:jl","PMID:16095622"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","termid":"GO:0016647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hydroxy-nicotine oxidase activity","termid":"GO:0019116"}


id: PBO:0070823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene","termid":"PBO:0070823"}


id: GO:0044061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by a symbiont organism of the functioning of excretion, the elimination by the host organism of the waste products that arise as a result of metabolic activity.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host excretion (obsolete GO:0044061)","synonyms":[{"name":"regulation by symbiont of host excretion","type":"exact"}],"termid":"GO:0044061"}


id: GO:0071406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methylmercury stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to methylmercury","termid":"GO:0051597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to methylmercury","synonyms":[{"name":"cellular response to CH3-Hg+","type":"exact"},{"name":"cellular response to MeHg+","type":"exact"}],"termid":"GO:0071406"}


id: GO:0018445
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of prothoracicotrophic hormone, a peptide hormone that is secreted by the brain and, upon receptor binding, acts on the prothoracic gland to stimulate the release of ecdysone in insects.","definition_xrefs":["PMID:3301403","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide hormone activity","termid":"GO:0005184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140677","GO:0005488","GO:0003674","GO:0005515","GO:0098772"],"is_obsolete":false,"name":"prothoracicotrophic hormone activity","termid":"GO:0018445"}


id: GO:0031628
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an opioid receptor.","definition_xrefs":["GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"opioid receptor binding","termid":"GO:0031628"}


id: PBO:0091527
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces MicroProtein","termid":"PBO:0091527"}


id: PBO:0051491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin superfamily member 9","termid":"PBO:0051491"}


id: PBO:0038749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 1A","termid":"PBO:0038749"}


id: PBO:0026732
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_kinetochore_during_mitotic_metaphase","termid":"PBO:0026732"}


id: PBO:0090086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal ubiquitin-protein ligase E3 Pex12","termid":"PBO:0090086"}


id: MOD:00436
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with an N-acetylhexosamine group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"N-acetylhexosaminylated residue","synonyms":[{"name":"HexNAc","type":"exact"},{"name":"N-Acetylhexosamine","type":"related"}],"termid":"MOD:00436"}


id: PBO:0064748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 84","termid":"PBO:0064748"}


id: FYPO:0007989
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which karyogamy involved in conjugation with cellular fusion does not occur because the nuclei fail to come in physical contact.","definition_xrefs":["PomBase:mlr","PMID:25869666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear congression during mating","termid":"FYPO:0003062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000301","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished nuclear congression during mating","termid":"FYPO:0007989"}


id: PR:C6Y4C0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC222.18 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4C0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor C222.18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC222.18","synonyms":[{"name":"Spom972h-SPAC222.18","type":"exact"}],"termid":"PR:C6Y4C0"}


id: PR:Q9C102
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutamate synthase [NADPH] large chain that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate synthase [NADPH] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1E7.07","secondary_identifiers":["UniProtKB:Q9C102"],"synonyms":[{"name":"NADPH-GOGAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gltB","type":"exact"}],"termid":"PR:Q9C102"}


id: GO:0098730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The symmetric division of a male germline stem cell to produce two male germline stem cells. An example of this is found in mammalian spermatogonial stem cells, some proportion of which divide symmetrically, so amplifying the population. The choice between asymmetric and symmetric division in this case appears to be internal and stochastic.","definition_xrefs":["PMID:19948499","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germline stem cell symmetric division","termid":"GO:0098729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male germline stem cell symmetric division","termid":"GO:0098730"}


id: PBO:0035932
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_trimethylation_at_centromere_during_vegetative_growth","termid":"PBO:0035932"}


id: PBO:0039033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with GTPase domain, ankyrin repeat and PH domain 10, pseudogene","termid":"PBO:0039033"}


id: PBO:0078391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 1-6","termid":"PBO:0078391"}


id: PBO:0048204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit beta2","termid":"PBO:0048204"}


id: PBO:0005356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-galactose transporter Gms1","termid":"PBO:0005356"}


id: PBO:0083986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutamine tRNA synthetase; monomeric class I tRNA synthetase that catalyzes the specific glutaminylation of tRNA(Gln); N-terminal domain proposed to be involved in enzyme-tRNA interactions","termid":"PBO:0083986"}


id: FYECO:0000402
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which xylose was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xylose added","termid":"FYECO:0000402"}


id: GO:0035716
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to chemokine (C-C motif) ligand 12.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-C chemokine binding","termid":"GO:0019957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 12 binding","synonyms":[{"name":"CCL12 binding","type":"exact"}],"termid":"GO:0035716"}


id: FYPO:0000166
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which negative regulation of the G2 to M transition of the mitotic cell cycle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"abnormal mitotic G2/M phase transition","termid":"FYPO:0000399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal regulation of G2/M transition of mitotic cell cycle","termid":"FYPO:0000166"}


id: GO:0042435
data:
  {"annotated_genes":["SJAG_05007","SJAG_01455","SJAG_03167","SJAG_02505"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99609,100504,87597,110819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000162"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of compounds that contain an indole (2,3-benzopyrrole) skeleton.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"indole-containing compound metabolic process","termid":"GO:0042430"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01455":null,"SJAG_02505":null,"SJAG_03167":null,"SJAG_05007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"indole-containing compound biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"indole derivative biosynthesis","type":"exact"},{"name":"indole derivative biosynthetic process","type":"exact"},{"name":"indole-containing compound anabolism","type":"exact"},{"name":"indole-containing compound biosynthesis","type":"exact"},{"name":"indole-containing compound formation","type":"exact"},{"name":"indole-containing compound synthesis","type":"exact"}],"termid":"GO:0042435","terms_by_termid":{"GO:0000162":null}}


id: FYPO:0009083
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of lithium chloride and methyl methanesulfonate than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002682","FYPO:0000139","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"resistance to lithium chloride and methyl methanesulfonate","synonyms":[{"name":"resistance to lithium chloride and MMS","type":"exact"},{"name":"resistance to lithium chloride and MMS during vegetative growth","type":"exact"},{"name":"resistance to lithium chloride and MMS in combination","type":"exact"},{"name":"resistance to lithium chloride and methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"resistance to lithium chloride and methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"resistance to lithium chloride and methyl methanesulfonate in combination","type":"exact"},{"name":"resistant to lithium chloride and MMS","type":"exact"},{"name":"resistant to lithium chloride and methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0009083"}


id: PBO:0038836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTS7 pseudogene 3","termid":"PBO:0038836"}


id: PBO:0031703
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_nuclear_export","termid":"PBO:0031703"}


id: PATO:0000286
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000286 cytoplasmic male sterility (obsolete PATO:0000286)","termid":"PATO:0000286"}


id: PBO:0053634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LINC00680-GUSBP4 readthrough, transcribed pseudogene","termid":"PBO:0053634"}


id: PATO:0000514
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000514 intolerant value (obsolete PATO:0000514)","termid":"PATO:0000514"}


id: PBO:0086092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein phosphatase that regulates the mating response; negatively regulates the MAP kinase signaling cascade during mating; member of the serine/threonine phosphatase PP1 family","termid":"PBO:0086092"}


id: PBO:0084119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Heme a synthase; required for the hydroxylation of heme O to form heme A, an essential prosthetic group for cytochrome c oxidase; oligomerization is required for function","termid":"PBO:0084119"}


id: PBO:0077787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase III alpha","termid":"PBO:0077787"}


id: PBO:0056905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIF4GD divergent transcript","termid":"PBO:0056905"}


id: GO:0006669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sphinganine-1-phosphate, the phosphorylated derivative of D-erythro-2-amino-1,3-octadecanediol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphinganine-1-phosphate metabolic process","termid":"GO:0006668"},{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"sphingolipid biosynthetic process","termid":"GO:0030148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sphinganine-1-phosphate biosynthetic process","synonyms":[{"name":"dihydrosphingosine-1-phosphate biosynthesis","type":"exact"},{"name":"dihydrosphingosine-1-phosphate biosynthetic process","type":"exact"},{"name":"sphinganine-1-phosphate anabolism","type":"exact"},{"name":"sphinganine-1-phosphate biosynthesis","type":"exact"},{"name":"sphinganine-1-phosphate formation","type":"exact"},{"name":"sphinganine-1-phosphate synthesis","type":"exact"}],"termid":"GO:0006669"}


id: GO:0070075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of the aqueous layer of the tear film from the lacrimal glands. Tears are the liquid product of a process of lacrimation to clean and lubricate the eyes. Tear fluid contains water, mucin, lipids, lysozyme, lactoferrin, lipocalin, lacritin, immunoglobulins, glucose, urea, sodium, and potassium.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"body fluid secretion","termid":"GO:0007589"},{"relation_name":"is_a","term_name":"secretion by tissue","termid":"GO:0032941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"tear secretion","termid":"GO:0070075"}


id: GO:0010015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of roots are generated and organized. The root is the usually underground part of a seed plant body that originates from the hypocotyl, functions as an organ of absorption, aeration, and food storage or as a means of anchorage and support.","definition_xrefs":["GOC:sm","ISBN:0877797099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant organ morphogenesis","termid":"GO:1905392"},{"relation_name":"part_of","term_name":"root development","termid":"GO:0048364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root morphogenesis","termid":"GO:0010015"}


id: GO:2001074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metanephric ureteric bud development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metanephros development","termid":"GO:0072215"},{"relation_name":"regulates","term_name":"metanephric part of ureteric bud development","termid":"GO:0035502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metanephric ureteric bud development","termid":"GO:2001074"}


id: PBO:0003040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adducin","termid":"PBO:0003040"}


id: GO:1903579
data:
  {"annotated_genes":["SJAG_00685","SJAG_05314"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74894,72076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ATP metabolic process.","definition_xrefs":["GO_REF:0000058","PMID:20695849","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of purine nucleotide metabolic process","termid":"GO:1900543"},{"relation_name":"is_a","term_name":"regulation of ATP metabolic process","termid":"GO:1903578"},{"relation_name":"negatively_regulates","term_name":"ATP metabolic process","termid":"GO:0046034"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of ATP metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"down regulation of ATP metabolic process","type":"exact"},{"name":"down regulation of ATP metabolism","type":"exact"},{"name":"down-regulation of ATP metabolic process","type":"exact"},{"name":"down-regulation of ATP metabolism","type":"exact"},{"name":"downregulation of ATP metabolic process","type":"exact"},{"name":"downregulation of ATP metabolism","type":"exact"},{"name":"inhibition of ATP metabolic process","type":"narrow"},{"name":"inhibition of ATP metabolism","type":"narrow"},{"name":"negative regulation of ATP metabolism","type":"exact"}],"termid":"GO:1903579","terms_by_termid":{"GO:0045820":null}}


id: PBO:0081477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 354A","termid":"PBO:0081477"}


id: PBO:0002912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MADS-box transcription factor Map1","termid":"PBO:0002912"}


id: PBO:0089003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar phytochelatin and glutathione S-conjugate ABC family transmembrane transporter Abc2","termid":"PBO:0089003"}


id: PBO:0049574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B.W histone 2","termid":"PBO:0049574"}


id: GO:1903713
data:
  {"annotated_genes":["SJAG_04725","SJAG_02029"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106158,98903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990591"}]},"cv_name":"biological_process","definition":"The directed movement of asparagine across a membrane.","definition_xrefs":["PMID:18503766","GO_REF:0000069","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02029":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"asparagine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903713","terms_by_termid":{"GO:1990591":null}}


id: PBO:0035902
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_H4-K20_dimethylation_at_double-strand_break_site_during_vegetative_growth","termid":"PBO:0035902"}


id: GO:0006526
data:
  {"annotated_genes":["SJAG_01461","SJAG_00412","SJAG_00695","SJAG_00636","SJAG_01592","SJAG_01019","SJAG_00635","SJAG_00392","SJAG_04577"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94232,94242,98722,99555,102631,106606,107221,108059,114560],"is_not":false,"summary":null,"term":"GO:0006526"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of arginine, 2-amino-5-(carbamimidamido)pentanoic acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arginine metabolic process","termid":"GO:0006525"},{"relation_name":"is_a","term_name":"glutamine family amino acid biosynthetic process","termid":"GO:0009084"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00412":null,"SJAG_00635":null,"SJAG_00636":null,"SJAG_00695":null,"SJAG_01019":null,"SJAG_01461":null,"SJAG_01592":null,"SJAG_04577":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-arginine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"arginine anabolism","type":"exact"},{"name":"arginine biosynthesis","type":"exact"},{"name":"arginine formation","type":"exact"},{"name":"arginine synthesis","type":"exact"}],"termid":"GO:0006526","terms_by_termid":{"GO:0006526":null}}


id: PBO:0025488
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"citrullinaemia type I","termid":"PBO:0025488"}


id: PBO:0046938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 53 member C","termid":"PBO:0046938"}


id: PBO:0034817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab geranylgeranyltransferase alpha subunit Bet4 (predicted)","termid":"PBO:0034817"}


id: FYPO:0006786
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing manganese ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000257","FYPO:0000139","FYPO:0002057","FYPO:0002060","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on manganese","synonyms":[{"name":"normal cell population growth in presence of manganese","type":"exact"},{"name":"normal cell population growth on manganese","type":"exact"},{"name":"normal cell population growth on manganese ion","type":"exact"},{"name":"normal cellular response to manganese","type":"related"},{"name":"normal growth on manganese ions","type":"exact"},{"name":"normal vegetative cell population growth on manganese","type":"exact"}],"termid":"FYPO:0006786"}


id: FYPO:0007345
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any RNA transcribed from euchromatic regions measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah","PMID:18957202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"increased euchromatin-derived RNA level","synonyms":[{"name":"increased accumulation of euchromatin-derived RNAs","type":"related"},{"name":"increased euchromatin-derived RNA accumulation","type":"related"},{"name":"increased euchromatin-derived RNA level during mitotic cell cycle","type":"related"},{"name":"increased euchromatin-derived RNA level during vegetative growth","type":"exact"},{"name":"increased euchromatin-derived transcript level","type":"exact"},{"name":"increased level of RNA transcribed from euchromatin","type":"exact"}],"termid":"FYPO:0007345"}


id: PBO:0000866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA/biotin carboxylase","termid":"PBO:0000866"}


id: PBO:0045766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ECI1 antisense RNA 1","termid":"PBO:0045766"}


id: GO:1904314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methamphetamine hydrochloride stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:22174933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amine stimulus","termid":"GO:0071418"},{"relation_name":"is_a","term_name":"response to methamphetamine hydrochloride","termid":"GO:1904313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to methamphetamine hydrochloride","synonyms":[{"name":"cellular response to methamphetamine HCL","type":"exact"}],"termid":"GO:1904314"}


id: SO:0001364
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_methylaminomethyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methylaminomethyluridine","secondary_identifiers":["RNAMOD:072"],"synonyms":[{"name":"5-methylaminomethyluridine","type":"exact"},{"name":"five methylaminomethyluridine","type":"exact"},{"name":"mnm5U","type":"exact"}],"termid":"SO:0001364"}


id: PBO:0056707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MELTF antisense RNA 1","termid":"PBO:0056707"}


id: PBO:0089576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein involved in heterochromatin assembly Dri1","termid":"PBO:0089576"}


id: GO:0031579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of membrane rafts, small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes.","definition_xrefs":["GOC:jl","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"membrane raft organization","synonyms":[{"name":"lipid raft organization","type":"exact"},{"name":"membrane raft organisation","type":"exact"},{"name":"membrane raft organization and biogenesis","type":"related"}],"termid":"GO:0031579"}


id: PBO:0052929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 20-1","termid":"PBO:0052929"}


id: GO:0019446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of tyrosine into other compounds, including phosphoenolpyruvate.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tyrosine catabolic process to phosphoenolpyruvate (obsolete GO:0019446)","synonyms":[{"name":"tyrosine breakdown to phosphoenolpyruvate","type":"exact"},{"name":"tyrosine degradation to phosphoenolpyruvate","type":"exact"}],"termid":"GO:0019446"}


id: GO:0005186
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The activity of binding to and activating specific cell surface receptors, thereby inducing behavioral, developmental, or physiological response(s) from a responding organism or cell. The substance may be released or retained on the cell surface. Pheromones may serve as a specific attractant, social communicator, or sexual stimulant.","definition_xrefs":["ISBN:0198506732","GOC:sgd_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor ligand activity","termid":"GO:0048018"}],"gene_count":0,"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0005488","GO:0140677","GO:0005515","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"pheromone activity","termid":"GO:0005186"}


id: PBO:0027320
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitochondrial_electron_transport,_succinate_to_ubiquinone","termid":"PBO:0027320"}


id: FYPO:0000089
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to methyl methanesulfonate. Cells stop growing (and may die) at a concentration of methyl methanesulfonate that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to DNA damaging agents","termid":"FYPO:0000266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0001985","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to methyl methanesulfonate","synonyms":[{"name":"hypersensitive to methyl methanesulfonate","type":"exact"},{"name":"sensitive to MMS","type":"exact"},{"name":"sensitive to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"sensitive to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"sensitive to methyl methanesulphonate","type":"exact"}],"termid":"FYPO:0000089"}


id: PBO:0053613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 649","termid":"PBO:0053613"}


id: PBO:0057645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1237","termid":"PBO:0057645"}


id: PBO:0059569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1M","termid":"PBO:0059569"}


id: PBO:0005528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Svf1 family protein Svf1","termid":"PBO:0005528"}


id: PBO:0085486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Processivity factor; required for the ubiquitination activity of the anaphase promoting complex (APC), mediates the activity of the APC by contributing to substrate recognition; involved in cyclin proteolysis; contains a conserved DOC1 homology domain","termid":"PBO:0085486"}


id: GO:0048190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the dorsal/ventral axis of the wing disc, a precursor to the adult wing.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dorsal/ventral pattern formation, imaginal disc","termid":"GO:0007450"},{"relation_name":"is_a","term_name":"wing disc pattern formation","termid":"GO:0035222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wing disc dorsal/ventral pattern formation","synonyms":[{"name":"wing disc dorsal-ventral pattern formation","type":"exact"},{"name":"wing disc dorsoventral pattern formation","type":"exact"}],"termid":"GO:0048190"}


id: GO:2000674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of type B pancreatic cell apoptotic process.","definition_xrefs":["GOC:obol","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell apoptotic process","termid":"GO:1904035"},{"relation_name":"regulates","term_name":"type B pancreatic cell apoptotic process","termid":"GO:0097050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of type B pancreatic cell apoptotic process","synonyms":[{"name":"regulation of pancreatic B cell apoptosis","type":"exact"},{"name":"regulation of pancreatic beta cell apoptosis","type":"exact"},{"name":"regulation of type B pancreatic cell apoptosis","type":"narrow"}],"termid":"GO:2000674"}


id: GO:0034708
data:
  {"annotated_genes":["SJAG_02119","SJAG_02329","SJAG_02768","SJAG_02386","SJAG_02637","SJAG_04574","SJAG_02170","SJAG_00341","SJAG_07011","SJAG_04181","SJAG_01325","SJAG_00896","SJAG_03680","SJAG_00769","SJAG_04848","SJAG_03431","SJAG_00756","SJAG_03949","SJAG_04680","SJAG_01540","SJAG_04890"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[106618,92787,90386,110142,113871,114983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043494"},{"annotations":[92538,92271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035657"},{"annotations":[105478,99223,90223,111869,86739,101744,113720,112711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048188"},{"annotations":[97052,108299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031515"},{"annotations":[92273,100252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043528"},{"annotations":[115165,111878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106143"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses methyltransferase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00341":null,"SJAG_00756":null,"SJAG_00769":null,"SJAG_00896":null,"SJAG_01325":null,"SJAG_01540":null,"SJAG_02119":null,"SJAG_02170":null,"SJAG_02329":null,"SJAG_02386":null,"SJAG_02637":null,"SJAG_02768":null,"SJAG_03431":null,"SJAG_03680":null,"SJAG_03949":null,"SJAG_04181":null,"SJAG_04574":null,"SJAG_04680":null,"SJAG_04848":null,"SJAG_04890":null,"SJAG_07011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"methyltransferase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034708","terms_by_termid":{"GO:0031515":null,"GO:0035657":null,"GO:0043494":null,"GO:0043528":null,"GO:0048188":null,"GO:0106143":null}}


id: PBO:0038706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1","termid":"PBO:0038706"}


id: PBO:0050940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 11, pseudogene","termid":"PBO:0050940"}


id: PBO:0045418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental pluripotency associated 5 pseudogene 3","termid":"PBO:0045418"}


id: PBO:0038903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor D1","termid":"PBO:0038903"}


id: PR:Q9P6P1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A syntaxin-16 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01081","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-SNARE affecting a late Golgi compartment protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.05c","secondary_identifiers":["UniProtKB:Q9P6P1"],"synonyms":[{"name":"Spom972h-STX16","type":"exact"},{"name":"syntaxin tlg2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6P1"}


id: PBO:0004597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine methyltransferase Set6 (predicted)","termid":"PBO:0004597"}


id: PBO:0054777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2190","termid":"PBO:0054777"}


id: SO:1001272
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intron found in tRNA that is spliced via endonucleolytic cleavage and ligation rather than transesterification.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonuclease_spliced_intron","termid":"SO:0001216"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA_intron","synonyms":[{"name":"pre-tRNA intron","type":"exact"},{"name":"tRNA intron","type":"exact"}],"termid":"SO:1001272"}


id: FYPO:0000208
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to cadmium ions is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype during vegetative growth","termid":"FYPO:0001342"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000298","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cellular response to cadmium ion","synonyms":[{"name":"abnormal cellular response to cadmium ion during mitotic cell cycle","type":"related"},{"name":"abnormal cellular response to cadmium ion during vegetative growth","type":"exact"}],"termid":"FYPO:0000208"}


id: GO:1900913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of olefin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of olefin metabolic process","termid":"GO:1900910"},{"relation_name":"is_a","term_name":"regulation of olefin biosynthetic process","termid":"GO:1900911"},{"relation_name":"positively_regulates","term_name":"olefin biosynthetic process","termid":"GO:1900674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of olefin biosynthetic process","synonyms":[{"name":"activation of olefin anabolism","type":"narrow"},{"name":"activation of olefin biosynthesis","type":"narrow"},{"name":"activation of olefin biosynthetic process","type":"narrow"},{"name":"activation of olefin formation","type":"narrow"},{"name":"activation of olefin synthesis","type":"narrow"},{"name":"positive regulation of olefin anabolism","type":"related"},{"name":"positive regulation of olefin biosynthesis","type":"related"},{"name":"positive regulation of olefin formation","type":"related"},{"name":"positive regulation of olefin synthesis","type":"related"},{"name":"up regulation of olefin anabolism","type":"related"},{"name":"up regulation of olefin biosynthesis","type":"related"},{"name":"up regulation of olefin biosynthetic process","type":"exact"},{"name":"up regulation of olefin formation","type":"related"},{"name":"up regulation of olefin synthesis","type":"related"},{"name":"up-regulation of olefin anabolism","type":"related"},{"name":"up-regulation of olefin biosynthesis","type":"related"},{"name":"up-regulation of olefin biosynthetic process","type":"exact"},{"name":"up-regulation of olefin formation","type":"related"},{"name":"up-regulation of olefin synthesis","type":"related"},{"name":"upregulation of olefin anabolism","type":"related"},{"name":"upregulation of olefin biosynthesis","type":"related"},{"name":"upregulation of olefin biosynthetic process","type":"exact"},{"name":"upregulation of olefin formation","type":"related"},{"name":"upregulation of olefin synthesis","type":"related"}],"termid":"GO:1900913"}


id: PBO:0028643
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_dehydrodolichyl_diphosphate_synthase_activity","termid":"PBO:0028643"}


id: GO:0060718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells of the ectoplacental cone acquire specialized structural and/or functional features that characterize chorionic trophoblasts. These cells will migrate towards the spongiotrophoblast layer and give rise to syncytiotrophoblasts of the labyrinthine layer.","definition_xrefs":["CL:0011101","GOC:dph","PMID:16983341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"chorion development","termid":"GO:0060717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chorionic trophoblast cell differentiation","termid":"GO:0060718"}


id: PBO:0079565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin associated protein 2 like","termid":"PBO:0079565"}


id: PBO:0074865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 50A","termid":"PBO:0074865"}


id: PBO:0030403
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_potassium_chloride","termid":"PBO:0030403"}


id: GO:0086057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a voltage-gated channel across the plasma membrane of a bundle of His cardiac muscle cell that contributes to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity involved in cardiac muscle cell action potential","termid":"GO:0086007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"voltage-gated calcium channel activity involved in bundle of His cell action potential","synonyms":[{"name":"voltage-gated calcium channel activity involved in bundle of His cardiac muscle cell action potential","type":"exact"}],"termid":"GO:0086057"}


id: GO:0046880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of follicle-stimulating hormone.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gonadotropin secretion","termid":"GO:0032276"},{"relation_name":"regulates","term_name":"follicle-stimulating hormone secretion","termid":"GO:0046884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of follicle-stimulating hormone secretion","synonyms":[{"name":"regulation of FSH secretion","type":"exact"},{"name":"regulation of follicle stimulating hormone secretion","type":"exact"}],"termid":"GO:0046880"}


id: GO:0106421
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: L-glutamate(out) + H+(in) = L-glutamate(in) + H+(out).","definition_xrefs":["PMID:29273736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamate transmembrane transporter activity","termid":"GO:0005313"},{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"amino acid:monoatomic cation antiporter activity","termid":"GO:0140848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"L-glutamate:proton antiporter activity","termid":"GO:0106421"}


id: PBO:0017912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspan protein implicated in mating Dni2 (predicted)","termid":"PBO:0017912"}


id: PR:O74500
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nup60 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup60 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC285.13c","synonyms":[{"name":"Spom972h-nup60","type":"exact"},{"name":"nuclear pore protein nup60 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74500"}


id: GO:0102560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5-phosphonato-alpha-D-ribose cyclic-1,2-phosphate + H2O = D-ribofuranose 2,5-bisphosphate + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 5-phospho-alpha-D-ribose 1,2-cyclic phosphate 1-phosphohydrolase activity (obsolete GO:0102560)","synonyms":[{"name":"phosphoribosyl 1,2-cyclic phosphate 1,2-diphosphodiesterase","type":"exact"}],"termid":"GO:0102560"}


id: GO:0039595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a virus increases the frequency, rate or extent of the breakdown of host messenger RNA (mRNA).","definition_xrefs":["PMID:17360652","PMID:12163576","PMID:22696660","PMID:16477041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host translation","termid":"GO:0039604"},{"relation_name":"regulates","term_name":"mRNA catabolic process","termid":"GO:0006402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated degradation of host mRNA","secondary_identifiers":["VZ:901"],"synonyms":[{"name":"induction by virus of catabolism of host mRNA","type":"exact"},{"name":"induction by virus of host mRNA catabolic process","type":"exact"},{"name":"induction of host mRNA decay","type":"exact"},{"name":"promotion of host mRNA degradation","type":"exact"},{"name":"viral induction of host mRNA decay","type":"exact"},{"name":"virus-mediated mRNA decay","type":"exact"}],"termid":"GO:0039595"}


id: GO:0102530
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: aclacinomycin T(1+) + H2O = 15-demethylaclacinomycin T + methanol + H+.","definition_xrefs":["EC:3.1.1.95","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"aclacinomycin T methylesterase activity","secondary_identifiers":["MetaCyc:RXN-14703","RHEA:37891"],"termid":"GO:0102530"}


id: FYPO:0006410
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of nitric oxide measured in a cell is lower than normal when the population in which the cell is found is in stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered cellular nitric oxide level","termid":"FYPO:0006408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular nitric oxide level during stationary phase","synonyms":[{"name":"decreased cellular NO level during stationary phase","type":"exact"},{"name":"decreased cellular nitric oxide level in stationary phase","type":"exact"},{"name":"decreased nitric oxide accumulation during stationary phase","type":"related"},{"name":"reduced cellular nitric oxide level during stationary phase","type":"exact"}],"termid":"FYPO:0006410"}


id: GO:0085018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a host organism maintains the structure and function of a symbiont-containing vacuole. The symbiont-containing vacuole is a membrane-bounded vacuole within a host cell in which a symbiont organism resides, and can serve to reduce pathogenicity of invading symbionts by restricting them to the vacuolar compartment.","definition_xrefs":["GOC:yaf","PMID:18665841","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete maintenance of symbiont-containing vacuole by host (obsolete GO:0085018)","synonyms":[{"name":"maintenance of parasitophorous vacuole","type":"exact"},{"name":"maintenance of pathogen-containing vacuole","type":"exact"},{"name":"maintenance of vacuolar integrity during bacterial infection","type":"narrow"}],"termid":"GO:0085018"}


id: GO:0051730
data:
  {"annotated_genes":["SJAG_00956"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86677],"is_not":false,"summary":null,"term":"GO:0051730"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP + 5'-dephospho-RNA = GDP + 5'-phospho-RNA.","definition_xrefs":["PMID:8428918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP-dependent polynucleotide 5'-hydroxyl-kinase activity","termid":"GO:0051735"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00956":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"GTP-dependent polyribonucleotide 5'-hydroxyl-kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GTP-dependent RNA 5'-hydroxyl-kinase activity","type":"exact"},{"name":"GTP-dependent RNA kinase activity","type":"exact"},{"name":"GTP-dependent polyribonucleotide kinase activity","type":"exact"}],"termid":"GO:0051730","terms_by_termid":{"GO:0051730":null}}


id: PBO:0050941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 12, pseudogene","termid":"PBO:0050941"}


id: GO:0000331
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized vacuole of eukaryotic cells, especially Protozoa, that fills with water from the cytoplasm and then discharges this externally by the opening of contractile vacuole pores. One of its functions is osmoregulatory.","definition_xrefs":["PMID:23890380","PMID:10503189","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuole","termid":"GO:0005773"},{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"},{"relation_name":"part_of","term_name":"contractile vacuole complex","termid":"GO:0062159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005773","GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"contractile vacuole","secondary_identifiers":["Wikipedia:Contractile_vacuole"],"synonyms":[{"name":"central bladder","type":"related"},{"name":"central vacuole","type":"related"}],"termid":"GO:0000331"}


id: GO:0017059
data:
  {"annotated_genes":["SJAG_04178","SJAG_01857","SJAG_00880","SJAG_02305","SJAG_02706","SJAG_04550"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88806,89590,92969,98250,101657,102101],"is_not":false,"summary":null,"term":"GO:0017059"}]},"cv_name":"cellular_component","definition":"A protein complex that catalyses the condensation of L-serine with palmitoyl-CoA to form 3-ketosphinganine, the sphingoid base which is the starting point for all sphingolipids. In bacteria the enzyme is a cytoplasmic homodimer, whereas in eukaryotes the enzyme is a multiprotein complex localised to the endoplasmic reticulum. The eukaryotic complex consists of catalytic components (SPTLC1, SPTLC2 and SPTLC3 in humans; LCB1 and LCB2 in S. cerevisiae) and regulatory components, which include activators (SPTSSA/SPTSSB in humans, TSC3 in S. cerevisiae) and negative regulators (ORMDL1/ORMDL2/ORMDL3 in humans, ORM1/2 in S. cerevisiae ).","definition_xrefs":["PMID:29863195","PMID:33558761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"palmitoyltransferase complex","termid":"GO:0002178"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00880":null,"SJAG_01857":null,"SJAG_02305":null,"SJAG_02706":null,"SJAG_04178":null,"SJAG_04550":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"serine palmitoyltransferase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SPOTS complex","type":"related"},{"name":"SPT","type":"related"},{"name":"serine C-palmitoyltransferase complex","type":"related"},{"name":"serine palmitoyltransferase, Orm1/2, Tsc3 and Sac1 complex","type":"related"}],"termid":"GO:0017059","terms_by_termid":{"GO:0017059":null}}


id: FYPO:0001449
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular trehalose level","synonyms":[{"name":"normal cellular trehalose accumulation","type":"related"},{"name":"normal cellular trehalose level during mitotic cell cycle","type":"related"},{"name":"normal cellular trehalose level during vegetative growth","type":"exact"}],"termid":"FYPO:0001449"}


id: GO:0052747
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: sinapaldehyde + NADPH + H+ = sinapyl-alcohol + NADP+.","definition_xrefs":["GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete sinapyl alcohol dehydrogenase activity (obsolete GO:0052747)","synonyms":[{"name":"sinapyl-alcohol dehydrogenase activity","type":"related"},{"name":"sinapyl-alcohol:NADP+ oxidoreductase activity","type":"exact"}],"termid":"GO:0052747"}


id: PBO:0055028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2443","termid":"PBO:0055028"}


id: GO:0050624
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-dihydrovomilenine + NADP+ = H+ + NADPH + vomilenine.","definition_xrefs":["EC:1.5.1.32","RHEA:16409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"vomilenine reductase activity","secondary_identifiers":["MetaCyc:1.5.1.32-RXN","KEGG_REACTION:R05878"],"synonyms":[{"name":"1,2-dihydrovomilenine:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0050624"}


id: PBO:0041859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 5","termid":"PBO:0041859"}


id: PBO:0024833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid synthase alpha subunit Fas2","termid":"PBO:0024833"}


id: GO:0070276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any halogen, elements of Group VII; includes metabolism of halogen-containing compounds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"halogen metabolic process","synonyms":[{"name":"halogen metabolism","type":"exact"}],"termid":"GO:0070276"}


id: SO:0002304
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An instance of a self-interacting DNA region flanked by left and right TAD boundaries.","definition_xrefs":["PMID:32782014","GREEKC:cl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"topologically_defined_region","termid":"SO:0001412"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"topologically_associated_domain","synonyms":[{"name":"TAD","type":"exact"},{"name":"topologically associated domain","type":"exact"}],"termid":"SO:0002304"}


id: GO:0052430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of RNA in a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont RNA levels (obsolete GO:0052430)","termid":"GO:0052430"}


id: MOD:00149
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts four L-cysteine residues and a four-iron four-sulfur cluster to tetrakis-L-cysteinyl tetrairon tetrasulfide.","definition_xrefs":["RESID:AA0140","PubMed:7803404","PubMed:932007","PubMed:7819196","PubMed:3351918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetrakis-L-cysteinyl tetrairon tetrasulfide","synonyms":[{"name":"METAL Iron-sulfur (4Fe-4S)","type":"exact"},{"name":"METAL Iron-sulfur (4Fe-4S); shared with dimeric partner","type":"exact"},{"name":"tetra-mu3-sulfido-tetrakis(cysteinato)-1kappaS,2kappaS,3kappaS,4kappaS-tetrahedro-tetrairon","type":"exact"},{"name":"tetra-mu3-sulfidotetrakis(S-cysteinyliron)","type":"exact"},{"name":"tetrakis-L-cysteinyl tetrairon tetrasulfide","type":"exact"}],"termid":"MOD:00149"}


id: PBO:0041841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer susceptibility 21","termid":"PBO:0041841"}


id: GO:0047845
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: deoxylimonoate + H2O = deoxylimononate D-ring-lactone + H+.","definition_xrefs":["RHEA:14997","EC:3.1.1.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"deoxylimonate A-ring-lactonase activity","secondary_identifiers":["KEGG_REACTION:R03803","MetaCyc:DEOXYLIMONATE-A-RING-LACTONASE-RXN"],"synonyms":[{"name":"deoxylimonate A-ring-lactonohydrolase activity","type":"related"}],"termid":"GO:0047845"}


id: MOD:01545
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems iTRAQ8plex-115 reporter+balance group.","definition_xrefs":["Unimod:731#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"iTRAQ8plex-115 reporter+balance reagent acylated residue","termid":"MOD:01542"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-115 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01545"}


id: PBO:0017878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid transmembrane transporter Avt5","termid":"PBO:0017878"}


id: GO:0048027
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an mRNA molecule at its 5' untranslated region.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA binding","termid":"GO:0003729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"mRNA 5'-UTR binding","synonyms":[{"name":"mRNA 5' UTR binding","type":"exact"}],"termid":"GO:0048027"}


id: PBO:0007319
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific Copper Activator","termid":"PBO:0007319"}


id: PBO:0061878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oocyte secreted protein 1 pseudogene 2","termid":"PBO:0061878"}


id: FYPO:0003016
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype observed in the vegetative growth phase of the life cycle in which a cell lyses, i.e. the plasma membrane ruptures and cytoplasm is lost, during a cellular response to non-ionic osmotic stress. Note that in fission yeast cell lysis, the integrity of the cell wall is also compromised.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell lysis","termid":"FYPO:0000647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"cell lysis during cellular response to non-ionic osmotic stress","synonyms":[{"name":"cell lysis during cellular response to non-ionic osmotic stress during mitotic cell cycle","type":"related"},{"name":"cell lysis during cellular response to non-ionic osmotic stress during vegetative growth","type":"exact"},{"name":"cytolysis during cellular response to non-ionic osmotic stress","type":"exact"},{"name":"inviable, lysed cell during cellular response to non-ionic osmotic stress","type":"exact"},{"name":"lysed cell in response to non-ionic osmotic stress","type":"exact"}],"termid":"FYPO:0003016"}


id: FYPO:0000120
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the presence, distribution, or morphology of the mitotic or meiotic spindle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton","termid":"FYPO:0002399"}],"gene_count":0,"genotype_count":0,"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000054","FYPO:0005447","FYPO:0002399"],"is_obsolete":false,"name":"abnormal spindle","secondary_identifiers":["FYPO:0000367"],"synonyms":[{"name":"spindle defects","type":"exact"}],"termid":"FYPO:0000120"}


id: PBO:0085636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in homologous recombination; attenuates resection of DNA double-strand break ends and stimulates strand exchange by facilitating Rad51p binding to single-stranded DNA; anneals complementary single-stranded DNA; involved in the repair of double-strand breaks in DNA during vegetative growth and meiosis and UV induced sister chromatid recombination; phosphorylation by Cdc28p in G2/M phase promotes Rad52p ring interaction that leads to superstructure formation","termid":"PBO:0085636"}


id: PBO:0040425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit e1 pseudogene 2","termid":"PBO:0040425"}


id: PBO:0082897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin, interacts with cyclin-dependent kinase Pho85p; member of the Pcl1,2-like subfamily, involved in the regulation of polarized growth and morphogenesis and progression through the cell cycle; is ubiquitinated by Dma1p; phosphorylation by Pho85p targets it for degradation; localizes to sites of polarized cell growth","termid":"PBO:0082897"}


id: PBO:0041366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 4 open reading frame 36","termid":"PBO:0041366"}


id: PBO:0050196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 13","termid":"PBO:0050196"}


id: PBO:0076966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGIF2-RAB5IF readthrough","termid":"PBO:0076966"}


id: PBO:0030461
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_biotin_import","termid":"PBO:0030461"}


id: GO:0044550
data:
  {"annotated_genes":["SJAG_00469","SJAG_04516","SJAG_04032","SJAG_00988","SJAG_00792","SJAG_01351","SJAG_02599","SJAG_04031"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90154,90146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031169"},{"annotations":[90101],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905569"},{"annotations":[104565,93083,93438,89342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046938"},{"annotations":[101513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019290"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of secondary metabolites, the compounds that are not necessarily required for growth and maintenance of cells, and are often unique to a taxon.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00469":null,"SJAG_00792":null,"SJAG_00988":null,"SJAG_01351":null,"SJAG_02599":null,"SJAG_04031":null,"SJAG_04032":null,"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"secondary metabolite biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"secondary metabolite biosynthesis","type":"exact"}],"termid":"GO:0044550","terms_by_termid":{"GO:0019290":null,"GO:0031169":null,"GO:0046938":null,"GO:1905569":null}}


id: PBO:0011150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-3,4,5-trisphosphate3-phosphatase Ptn1","termid":"PBO:0011150"}


id: GO:0033038
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with soluble bitter compounds to initiate a change in cell activity. These receptors are responsible for the sense of bitter taste.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"taste receptor activity","termid":"GO:0008527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"bitter taste receptor activity","termid":"GO:0033038"}


id: PBO:0090810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate Meikin ortholog, syntenic position","termid":"PBO:0090810"}


id: PR:Q9USR1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thioredoxin-like protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02582","PRO:DNx","PANTHER:PTHR10438:SF19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin-like protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC577.08c","secondary_identifiers":["UniProtKB:Q9USR1"],"synonyms":[{"name":"Spom972h-TXNL1","type":"exact"},{"name":"thioredoxin homolog 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USR1"}


id: GO:0102786
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: O2 + a stearoyl-[acp] + a reduced ferredoxin = 2 H2O + an oleoyl-[acp] + an oxidized ferredoxin.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete stearoyl-[acp] desaturase activity (obsolete GO:0102786)","termid":"GO:0102786"}


id: PBO:0028943
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_(1->3)-beta-D-glucan_level_at_cell_tip","termid":"PBO:0028943"}


id: PBO:0058149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4444-2","termid":"PBO:0058149"}


id: PBO:0027247
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_polyadenylated_25S_rRNA_level","termid":"PBO:0027247"}


id: PBO:0084109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Heat shock protein of the Hsp70 family; localized in mitochondrial nucleoids, plays a role in protein translocation, interacts with Mge1p in an ATP-dependent manner; overexpression induces extensive mitochondrial DNA aggregations; ECM10 has a paralog, SSC1, that arose from the whole genome duplication","termid":"PBO:0084109"}


id: GO:0039716
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic viral factory that is electron dense due to high levels of viral RNA. Produced by nucleo-cytoplasmic large DNA viruses (NCLDV) like Poxviridae, Asfarviridae and Iridoviridae, and dsRNA viruses like Reoviridae.","definition_xrefs":["Wikipedia:Viroplasm","VZ:1951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic viral factory","termid":"GO:0039714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viroplasm viral factory","termid":"GO:0039716"}


id: GO:0016062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a rhodopsin-mediated signaling pathway is adjusted to modulate the sensitivity and response of a visual system to light stimuli (that might vary over more than 6 magnitudes in intensity) without response saturation.","definition_xrefs":["PMID:1962207"],"gene_count":0,"genotype_count":0,"name":"obsolete adaptation of rhodopsin mediated signaling (obsolete GO:0016062)","synonyms":[{"name":"adaptation of rhodopsin mediated signalling","type":"exact"}],"termid":"GO:0016062"}


id: PBO:0028722
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_cell_cycle_arrest_in_mitotic_interphase,_elongated_cells","termid":"PBO:0028722"}


id: PBO:0069707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 987, pseudogene","termid":"PBO:0069707"}


id: GO:1901004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ubiquinone-6. Ubiquinone-6 is a ubiquinone compound having a (2E,6E,10E,14E,18E)-3,7,11,15,19,23-hexamethyltetracosa-2,6,10,14,18,22-hexaen-1-yl substituent at position 2.","definition_xrefs":["GOC:al","GOC:TermGenie","PMID:1409592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquinone metabolic process","termid":"GO:0006743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ubiquinone-6 metabolic process","synonyms":[{"name":"coenzyme Q6 metabolic process","type":"exact"},{"name":"coenzyme Q6 metabolism","type":"exact"},{"name":"ubiquinone-6 metabolism","type":"exact"}],"termid":"GO:1901004"}


id: GO:0005326
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of a neurotransmitter into, out of or within a cell, or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"neurotransmitter transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-374919","Reactome:R-HSA-374896"],"synonyms":[{"name":"neurotransmitter transporter activity","type":"related"}],"termid":"GO:0005326"}


id: PBO:0072516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 45","termid":"PBO:0072516"}


id: GO:1902415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mRNA binding.","definition_xrefs":["PMID:22890846","GOC:rb","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA binding","termid":"GO:1905214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mRNA binding","termid":"GO:1902415"}


id: GO:0031986
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A leucoplast in which protein is stored.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leucoplast","termid":"GO:0009516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"proteinoplast","secondary_identifiers":["Wikipedia:Proteinoplast"],"termid":"GO:0031986"}


id: PBO:0050275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 5","termid":"PBO:0050275"}


id: PBO:0090651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Coa3","termid":"PBO:0090651"}


id: FYPO:0004088
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the morphology of cytoplasmic microtubules is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002399","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000054"],"is_obsolete":false,"name":"abnormal cytoplasmic microtubules","synonyms":[{"name":"abnormal cytoplasmic microtubule morphology","type":"exact"},{"name":"abnormal cytoplasmic microtubule structure","type":"narrow"},{"name":"abnormal cytoplasmic microtubules during mitotic cell cycle","type":"related"},{"name":"abnormal cytoplasmic microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0004088"}


id: PBO:0028030
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_DNA_replication","termid":"PBO:0028030"}


id: PBO:0091329
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPP34 domain-containing protein","termid":"PBO:0091329"}


id: PBO:0046366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleoside triphosphate diphosphohydrolase 3","termid":"PBO:0046366"}


id: PBO:0052076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin regulatory subunit B1 like 1 pseudogene 1","termid":"PBO:0052076"}


id: PR:O94481
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription factor TFIIIB component B'' that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR22929:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIIB component B'' (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.14c","secondary_identifiers":["UniProtKB:O94481"],"synonyms":[{"name":"SPCC1919.14c","type":"related"},{"name":"Spom972h-BDP1","type":"exact"},{"name":"tfc5","type":"related"},{"name":"transcription factor TFIIIB complex subunit bdp1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94481"}


id: MOD:01641
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-leucine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-leucine residue","termid":"MOD:00911"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-leucine removal","termid":"MOD:01641"}


id: PBO:0067196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 260, pseudogene","termid":"PBO:0067196"}


id: GO:0140864
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a ubiquitin molecule to histone 2A at the lysine-129 residue.","definition_xrefs":["PMID:28624371"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A ubiquitin ligase activity","termid":"GO:0141053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0004842"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0140096","GO:0016746","GO:0019787","GO:0004842","GO:0003674"],"is_obsolete":false,"name":"histone H2AK129 ubiquitin ligase activity","secondary_identifiers":["KEGG_REACTION:R03876"],"synonyms":[{"name":"histone H2A-K129 ubiquitin ligase activity","type":"exact"},{"name":"histone ubiquitin ligase activity (H2A-K129 specific)","type":"exact"}],"termid":"GO:0140864"}


id: GO:0034355
data:
  {"annotated_genes":["SJAG_03298"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85052],"is_not":false,"summary":null,"term":"GO:0034355"}]},"cv_name":"biological_process","definition":"Any process that generates nicotinamide adenine dinucleotide (NAD) from derivatives of it, without de novo synthesis; salvage is usually from the degradation products nicotinic acid (Na) and nicotinamide (Nam).","definition_xrefs":["GOC:mah","PMID:27374990","PMID:12648681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD biosynthetic process","termid":"GO:0009435"},{"relation_name":"is_a","term_name":"pyridine nucleotide salvage","termid":"GO:0019365"},{"relation_name":"is_a","term_name":"purine nucleotide salvage","termid":"GO:0032261"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03298":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"NAD salvage","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NAD salvage pathway","type":"exact"}],"termid":"GO:0034355","terms_by_termid":{"GO:0034355":null}}


id: PBO:0059559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1C, pseudogene","termid":"PBO:0059559"}


id: PBO:0018018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoserine kinase Thr1 (predicted)","termid":"PBO:0018018"}


id: PBO:0040639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BASP1 pseudogene 1","termid":"PBO:0040639"}


id: PBO:0089111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein involved in export of mRNAs Hrb1","termid":"PBO:0089111"}


id: PBO:0070554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 20","termid":"PBO:0070554"}


id: PBO:0000257
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.3.3.4","termid":"PBO:0000257"}


id: PBO:0053900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1189","termid":"PBO:0053900"}


id: GO:0010923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate or frequency of phosphatase activity. Phosphatases catalyze the hydrolysis of phosphoric monoesters, releasing inorganic phosphate.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatase activity","termid":"GO:0010921"},{"relation_name":"is_a","term_name":"negative regulation of dephosphorylation","termid":"GO:0035305"},{"relation_name":"is_a","term_name":"negative regulation of hydrolase activity","termid":"GO:0051346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of phosphatase activity","termid":"GO:0010923"}


id: PBO:0087253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase; inhibits pheromone induced signalling downstream of MAPK, possibly at the level of the Ste12p transcription factor; mutant has increased aneuploidy tolerance; PRR2 has a paralog, NPR1, that arose from the whole genome duplication","termid":"PBO:0087253"}


id: FYPO:0001457
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to tunicamycin. Cells stop growing (and may die) at a concentration of tunicamycin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002683","FYPO:0000003","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to tunicamycin","synonyms":[{"name":"hypersensitive to tunicamycin","type":"exact"},{"name":"sensitive to tunicamycin during mitotic cell cycle","type":"related"},{"name":"sensitive to tunicamycin during vegetative growth","type":"exact"}],"termid":"FYPO:0001457"}


id: PBO:0031064
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_with_abnormal_germ_tube_morphology","termid":"PBO:0031064"}


id: PBO:0002465
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repeat containing","termid":"PBO:0002465"}


id: PBO:0079584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 C pseudogene 5","termid":"PBO:0079584"}


id: PR:O94309
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- git11 gene.","definition_xrefs":["UniProtKB:O94309","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine nucleotide-binding protein subunit gamma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.04","synonyms":[{"name":"Spom972h-git11","type":"exact"}],"termid":"PR:O94309"}


id: PBO:0048290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galanin receptor 2","termid":"PBO:0048290"}


id: PBO:0052079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin regulatory subunit B1 like 1 pseudogene 4","termid":"PBO:0052079"}


id: PBO:0046701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS variant transcription factor 1","termid":"PBO:0046701"}


id: GO:0044209
data:
  {"annotated_genes":["SJAG_01070","SJAG_01859"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89572,113019],"is_not":false,"summary":null,"term":"GO:0044209"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of adenosine monophosphate (AMP) from derivatives of it (either adenine, ADP or adenosine 3',5'-bisphosphate) without de novo synthesis.","definition_xrefs":["PMID:8917457","PMID:9864350","GOC:jl","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AMP biosynthetic process","termid":"GO:0006167"},{"relation_name":"is_a","term_name":"purine ribonucleotide salvage","termid":"GO:0106380"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01070":null,"SJAG_01859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"AMP salvage","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"AMP biosynthetic process via salvage pathway","type":"exact"},{"name":"adenosine monophosphate salvage","type":"exact"}],"termid":"GO:0044209","terms_by_termid":{"GO:0044209":null}}


id: GO:0019019
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A segmented viral genome consisting of three sub-genomic nucleic acids but each nucleic acid is packaged into a different virion.","definition_xrefs":["ISBN:0121585336"],"gene_count":0,"genotype_count":0,"name":"obsolete tripartite viral genome (obsolete GO:0019019)","termid":"GO:0019019"}


id: GO:0090207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving triglyceride, any triester of glycerol.","definition_xrefs":["GOC:tb","GOC:sl","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid metabolic process","termid":"GO:0019216"},{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"regulates","term_name":"triglyceride metabolic process","termid":"GO:0006641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of triglyceride metabolic process","termid":"GO:0090207"}


id: FYPO:0006806
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a galactosyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal galactosyltransferase activity","termid":"FYPO:0006805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"decreased galactosyltransferase activity","synonyms":[{"name":"reduced galactosyltransferase activity","type":"exact"}],"termid":"FYPO:0006806"}


id: PR:O94373
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atp4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit 4, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.07","synonyms":[{"name":"Spom972h-atp4","type":"exact"}],"termid":"PR:O94373"}


id: GO:0042819
data:
  {"annotated_genes":["SJAG_00283","SJAG_01881","SJAG_01383","SJAG_01543","SJAG_00252","SJAG_00691","SJAG_00707"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036001"},{"annotations":[111862,95770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009443"},{"annotations":[110551,96955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042821"},{"annotations":[63539,83758,91545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042823"},{"annotations":[107978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"},{"annotations":[83760,91546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008615"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any of the vitamin B6 compounds; pyridoxal, pyridoxamine and pyridoxine and the active form, pyridoxal phosphate.","definition_xrefs":["GOC:jl","PMID:30671974","PMID:16157873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"water-soluble vitamin biosynthetic process","termid":"GO:0042364"},{"relation_name":"is_a","term_name":"vitamin B6 metabolic process","termid":"GO:0042816"},{"relation_name":"is_a","term_name":"pyridine-containing compound biosynthetic process","termid":"GO:0072525"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00252":null,"SJAG_00283":null,"SJAG_00691":null,"SJAG_00707":null,"SJAG_01383":null,"SJAG_01543":null,"SJAG_01881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0008150"],"is_obsolete":false,"name":"vitamin B6 biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"pyridoxine-5'-phosphate biosynthesis","type":"related"},{"name":"vitamin B6 anabolism","type":"exact"},{"name":"vitamin B6 biosynthesis","type":"exact"},{"name":"vitamin B6 formation","type":"exact"},{"name":"vitamin B6 synthesis","type":"exact"}],"termid":"GO:0042819","terms_by_termid":{"GO:0008615":null,"GO:0009443":null,"GO:0010144":null,"GO:0036001":null,"GO:0042821":null,"GO:0042823":null}}


id: PBO:0035697
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-acts_upstream_of_or_within","termid":"PBO:0035697"}


id: GO:0018670
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-aminobenzoate + NADPH + H+ + O2 = 4-hydroxyaniline + NADP+ + H2O + CO2.","definition_xrefs":["EC:1.14.13.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"4-aminobenzoate 1-monooxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0597","MetaCyc:4-AMINOBENZOATE-1-MONOOXYGENASE-RXN"],"synonyms":[{"name":"4-aminobenzoate dehydrogenase activity","type":"related"},{"name":"4-aminobenzoate hydroxylase activity","type":"exact"},{"name":"4-aminobenzoate monooxygenase activity","type":"related"},{"name":"4-aminobenzoate,NAD(P)H:oxygen oxidoreductase (1-hydroxylating, decarboxylating)","type":"related"}],"termid":"GO:0018670"}


