# terms

id: PBO:0087042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L1B; N-terminally acetylated; homologous to mammalian ribosomal protein L10A and bacterial L1; RPL1B has a paralog, RPL1A, that arose from the whole genome duplication; rpl1a rpl1b double null mutation is lethal; ribosomes containing Rpl1b are more efficient in translation of respiration-related proteins","termid":"PBO:0087042"}


id: GO:0062058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a transcription factor TFIIH holo complex.","definition_xrefs":["PMID:11259578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"transcription factor TFIIH holo complex binding","termid":"GO:0062058"}


id: PBO:0063732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase and actin regulator 4","termid":"PBO:0063732"}


id: GO:0033226
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 2-aminoethylphosphonate.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"2-aminoethylphosphonate binding","synonyms":[{"name":"2-phosphonoethylamine binding","type":"exact"},{"name":"ciliatine binding","type":"exact"}],"termid":"GO:0033226"}


id: PBO:0060633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicalin","termid":"PBO:0060633"}


id: PBO:0071567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 33","termid":"PBO:0071567"}


id: GO:0002178
data:
  {"annotated_genes":["SJAG_04178","SJAG_00880","SJAG_04550","SJAG_01349","SJAG_04451","SJAG_02305","SJAG_02706","SJAG_01857"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93098,106285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031211"},{"annotations":[88806,89590,101657,92969,98250,102101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017059"}]},"cv_name":"cellular_component","definition":"A protein complex with palmitoyltransferase activity.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00880":null,"SJAG_01349":null,"SJAG_01857":null,"SJAG_02305":null,"SJAG_02706":null,"SJAG_04178":null,"SJAG_04451":null,"SJAG_04550":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"palmitoyltransferase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0002178","terms_by_termid":{"GO:0017059":null,"GO:0031211":null}}


id: PBO:0049682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacylglutathione hydrolase","termid":"PBO:0049682"}


id: PBO:0113216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitogen-activated protein kinase (MAPK); involved in signal transduction pathways that control filamentous growth and pheromone response; regulates septum assembly, and may directly phosphorylate Bni4p; the KSS1 gene is nonfunctional in some S288C-related strains and functional in W303a strains","termid":"PBO:0113216"}


id: PBO:0074904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 76","termid":"PBO:0074904"}


id: PBO:0066663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor interacting serine/threonine kinase 4","termid":"PBO:0066663"}


id: PBO:0069757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1040, pseudogene","termid":"PBO:0069757"}


id: PBO:0030477
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_serine_level","termid":"PBO:0030477"}


id: PBO:0000397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cullin 3","termid":"PBO:0000397"}


id: GO:1900451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glutamate receptor signaling pathway.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of glutamate receptor signaling pathway","termid":"GO:1900449"},{"relation_name":"positively_regulates","term_name":"glutamate receptor signaling pathway","termid":"GO:0007215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of glutamate receptor signaling pathway","synonyms":[{"name":"activation of glutamate receptor signaling pathway","type":"narrow"},{"name":"activation of glutamate signaling pathway","type":"exact"},{"name":"activation of glutamate signalling pathway","type":"exact"},{"name":"positive regulation of glutamate signaling pathway","type":"exact"},{"name":"positive regulation of glutamate signalling pathway","type":"exact"},{"name":"up regulation of glutamate receptor signaling pathway","type":"exact"},{"name":"up regulation of glutamate signaling pathway","type":"exact"},{"name":"up regulation of glutamate signalling pathway","type":"exact"},{"name":"up-regulation of glutamate receptor signaling pathway","type":"exact"},{"name":"up-regulation of glutamate signaling pathway","type":"exact"},{"name":"up-regulation of glutamate signalling pathway","type":"exact"},{"name":"upregulation of glutamate receptor signaling pathway","type":"exact"},{"name":"upregulation of glutamate signaling pathway","type":"exact"},{"name":"upregulation of glutamate signalling pathway","type":"exact"}],"termid":"GO:1900451"}


id: PBO:0027960
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_nitrite_level","termid":"PBO:0027960"}


id: FYPO:0005226
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of ubiquitinated protein measured the cell is lower than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased level of ubiquitinated protein in cell","synonyms":[{"name":"decreased accumulation of ubiquitinated protein in cell","type":"related"},{"name":"decreased level of ubiquitinated protein in cell during mitotic cell cycle","type":"related"},{"name":"decreased level of ubiquitinated protein in cell during vegetative growth","type":"exact"},{"name":"decreased level of ubiquitylated protein in cell","type":"exact"},{"name":"decreased ubiquitinated protein level during vegetative growth","type":"exact"},{"name":"reduced level of ubiquitinated protein in cell","type":"exact"}],"termid":"FYPO:0005226"}


id: PBO:0056245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrophage interferon regulatory lncRNA","termid":"PBO:0056245"}


id: GO:2000350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signaling via the CD40 signaling pathway.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of CD40 signaling pathway","termid":"GO:2000348"},{"relation_name":"positively_regulates","term_name":"CD40 signaling pathway","termid":"GO:0023035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of CD40 signaling pathway","synonyms":[{"name":"positive regulation of CD40 signalling pathway","type":"exact"}],"termid":"GO:2000350"}


id: PBO:0000460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S24 (predicted)","termid":"PBO:0000460"}


id: GO:0043278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a morphine stimulus. Morphine is an opioid alkaloid, isolated from opium, with a complex ring structure.","definition_xrefs":["GOC:ef","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to isoquinoline alkaloid","termid":"GO:0014072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to morphine","termid":"GO:0043278"}


id: PBO:0111347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit processome, CGI-48 family Utp18","termid":"PBO:0111347"}


id: GO:0045185
data:
  {"annotated_genes":["SJAG_01017","SJAG_00368","SJAG_01993","SJAG_00030","SJAG_00661","SJAG_04982","SJAG_01001","SJAG_01738"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032065"},{"annotations":[96255,90064,107005,100765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097248"},{"annotations":[88153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006621"},{"annotations":[110482,93793],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042989"}]},"cv_name":"biological_process","definition":"Any process in which a protein is maintained in a location and prevented from moving elsewhere. These include sequestration, stabilization to prevent transport elsewhere and the active retrieval of proteins that do move away.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of location","termid":"GO:0051235"},{"relation_name":"part_of","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00368":null,"SJAG_00661":null,"SJAG_01001":null,"SJAG_01017":null,"SJAG_01738":null,"SJAG_01993":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of protein location","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"active protein retrieval","type":"narrow"},{"name":"maintenance of protein localization","type":"related"},{"name":"protein retention","type":"narrow"},{"name":"protein sequestering","type":"narrow"}],"termid":"GO:0045185","terms_by_termid":{"GO:0006621":null,"GO:0032065":null,"GO:0042989":null,"GO:0097248":null}}


id: PBO:0084798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein kinase; negatively regulates activity of the pyruvate dehydrogenase complex by phosphorylating the ser-133 residue of the Pda1p subunit; acts in concert with kinase Pkp1p and phosphatases Ptc5p and Ptc6p; relocalizes from mitochondrion to cytoplasm upon DNA replication stress","termid":"PBO:0084798"}


id: PBO:0054263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1648","termid":"PBO:0054263"}


id: BFO:0000054
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"realized_in","termid":"BFO:0000054"}


id: PBO:0063838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase inhibitor 3","termid":"PBO:0063838"}


id: PBO:0052392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin associated protein 3","termid":"PBO:0052392"}


id: PBO:0031659
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_pseudohyphal_growth","termid":"PBO:0031659"}


id: GO:0046135
data:
  {"annotated_genes":["SJAG_01673","SJAG_00957","SJAG_03771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86684],"is_not":false,"summary":null,"term":"GO:0046135"},{"annotations":[104508,85227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009972"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of one of a family of organic molecules consisting of a pyrimidine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside metabolic process","termid":"GO:0006213"},{"relation_name":"is_a","term_name":"nucleoside catabolic process","termid":"GO:0009164"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound catabolic process","termid":"GO:0072529"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_01673":null,"SJAG_03771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyrimidine nucleoside catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine nucleoside breakdown","type":"exact"},{"name":"pyrimidine nucleoside catabolism","type":"exact"},{"name":"pyrimidine nucleoside degradation","type":"exact"}],"termid":"GO:0046135","terms_by_termid":{"GO:0009972":null,"GO:0046135":null}}


id: PBO:0076400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor, RNA polymerase I subunit B","termid":"PBO:0076400"}


id: GO:0035561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chromatin binding. Chromatin binding is the selective interaction with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.","definition_xrefs":["PMID:20404130","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of binding","termid":"GO:0051098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chromatin binding","termid":"GO:0035561"}


id: PBO:0036153
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_methyltransferase_activity","termid":"PBO:0036153"}


id: PBO:0056849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microsomal glutathione S-transferase 1","termid":"PBO:0056849"}


id: PBO:0085300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pheromone-regulated protein proposed to be involved in mating; predicted to have 1 transmembrane segment; transcriptionally regulated by Ste12p during mating and by Cat8p during the diauxic shift","termid":"PBO:0085300"}


id: PBO:0030673
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_nucleus_during_vegetative_growth","termid":"PBO:0030673"}


id: MOD:00097
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to glycine amide.","definition_xrefs":["PubMed:13591312","RESID:AA0088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine amide","synonyms":[{"name":"2-aminoacetamide","type":"exact"},{"name":"2-aminoethanamide","type":"exact"},{"name":"2-azanylethanamide","type":"exact"},{"name":"GlyN","type":"exact"},{"name":"MOD_RES Glycine amide","type":"exact"},{"name":"amidated glycine","type":"exact"},{"name":"glycinamide","type":"exact"},{"name":"glycine amide","type":"exact"}],"termid":"MOD:00097"}


id: PBO:0060333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYO3B antisense RNA 1","termid":"PBO:0060333"}


id: GO:0120014
data:
  {"annotated_genes":["SJAG_00576","SJAG_16459","SJAG_01305","SJAG_03172","SJAG_01229","SJAG_03338","SJAG_03746","SJAG_03710","SJAG_03721","SJAG_03741","SJAG_06440","SJAG_04370","SJAG_03416","SJAG_00230","SJAG_01225"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85264,86935,100165,101967,102860,103655,103783],"is_not":false,"summary":null,"term":"GO:0120014"},{"annotations":[105645,98313,97369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990050"},{"annotations":[93623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120019"},{"annotations":[94707,105659,112418,93560,93624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008526"}]},"cv_name":"molecular_function","definition":"Removes a phospholipid from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle.","definition_xrefs":["GOC:krc","PMID:24220498","PMID:20823909","PMID:25797198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transporter activity","termid":"GO:0005548"},{"relation_name":"is_a","term_name":"lipid transfer activity","termid":"GO:0120013"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00230":null,"SJAG_00576":null,"SJAG_01225":null,"SJAG_01229":null,"SJAG_01305":null,"SJAG_03172":null,"SJAG_03338":null,"SJAG_03416":null,"SJAG_03710":null,"SJAG_03721":null,"SJAG_03741":null,"SJAG_03746":null,"SJAG_04370":null,"SJAG_06440":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0120013"}],"interesting_parent_ids":["GO:0120013","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"phospholipid transfer activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"intermembrane phospholipid transfer activity","type":"narrow"},{"name":"phospholipid carrier activity","type":"exact"}],"termid":"GO:0120014","terms_by_termid":{"GO:0008526":null,"GO:0120014":null,"GO:0120019":null,"GO:1990050":null}}


id: PBO:0088567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome-c reductase complex subunit 5, Rip1","termid":"PBO:0088567"}


id: GO:0047874
data:
  {"annotated_genes":["SJAG_02056"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107049],"is_not":false,"summary":null,"term":"GO:0047874"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: dolichyl diphosphate + H2O = dolichyl phosphate + phosphate.","definition_xrefs":["EC:3.6.1.43","MetaCyc:DOLICHYLDIPHOSPHATASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02056":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"dolichyldiphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-446200","RHEA:14385"],"synonyms":[{"name":"dolichol diphosphatase activity","type":"related"},{"name":"dolichyl diphosphate phosphohydrolase activity","type":"related"},{"name":"dolichyl pyrophosphatase activity","type":"related"},{"name":"dolichyl-diphosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0047874","terms_by_termid":{"GO:0047874":null}}


id: GO:0099509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates the concentration of calcium in the presynaptic cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytosolic calcium ion concentration","termid":"GO:0051480"},{"relation_name":"is_a","term_name":"neuron cellular homeostasis","termid":"GO:0070050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"regulation of presynaptic cytosolic calcium ion concentration","synonyms":[{"name":"regulation of presynaptic cytosolic calcium levels","type":"exact"}],"termid":"GO:0099509"}


id: GO:0015278
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a channel that opens when a specific intracellular ligand has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly ligand-gated monoatomic ion channel activity","termid":"GO:0005217"},{"relation_name":"is_a","term_name":"ligand-gated calcium channel activity","termid":"GO:0099604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"intracellularly gated calcium channel activity","secondary_identifiers":["GO:0005218","Reactome:R-HSA-9717215"],"synonyms":[{"name":"calcium-release channel activity","type":"exact"},{"name":"intracellular ligand-gated calcium channel activity","type":"related"}],"termid":"GO:0015278"}


id: PBO:0038784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminoacylase 3","termid":"PBO:0038784"}


id: PBO:0028779
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_telomere_during_vegetative_growth","termid":"PBO:0028779"}


id: PBO:0051036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGF like family member 4","termid":"PBO:0051036"}


id: PBO:0005505
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.4.1.8","termid":"PBO:0005505"}


id: GO:0090647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the processes that arise as an organism progresses toward the end of its lifespan that results in a decline in behavioral activities such as locomotory behavior, and learning or memory.","definition_xrefs":["GOC:cjm","GOC:kmv","PMID:20523893"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of age-related behavioral decline (obsolete GO:0090647)","termid":"GO:0090647"}


id: GO:0035615
data:
  {"annotated_genes":["SJAG_03726","SJAG_01167","SJAG_00800","SJAG_01809","SJAG_00379","SJAG_02453","SJAG_00108","SJAG_04931","SJAG_00104","SJAG_04609","SJAG_02805","SJAG_00152","SJAG_04565"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84942,90231,92190,92334,95405,97216,104470,107649,107746,107808,108938,109168,115064],"is_not":false,"summary":null,"term":"GO:0035615"}]},"cv_name":"molecular_function","definition":"Bringing together a cargo protein with clathrin, responsible for the formation of endocytic vesicles.","definition_xrefs":["GOC:BHF","PMID:15728179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cargo adaptor activity","termid":"GO:0140312"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00108":null,"SJAG_00152":null,"SJAG_00379":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_01809":null,"SJAG_02453":null,"SJAG_02805":null,"SJAG_03726":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_04931":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0060090","GO:0030674","GO:0003674"],"is_obsolete":false,"name":"clathrin adaptor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"clathrin-associated adaptor activity","type":"exact"}],"termid":"GO:0035615","terms_by_termid":{"GO:0035615":null}}


id: FYPO:0007197
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial fission, the division of a mitochondrion into two or more separate compartments, occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah","PMID:30602572"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial fission","termid":"FYPO:0004340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased mitochondrial fission","synonyms":[{"name":"increased frequency of mitochondrial fission","type":"exact"},{"name":"increased mitochondrial division","type":"exact"},{"name":"increased mitochondrial fission during mitotic cell cycle","type":"related"},{"name":"increased mitochondrial fission during vegetative growth","type":"exact"},{"name":"increased mitochondrial proliferation","type":"related"}],"termid":"FYPO:0007197"}


id: PR:P36603
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribonucleoside-diphosphate reductase small chain that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PMID:12867051","PMID:20516199","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"ribonucleoside-diphosphate reductase small chain (Schizosaccharomyces pombe)","termid":"PR:000036299"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleoside-diphosphate reductase small chain (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25D12.04","secondary_identifiers":["PR:000027714","UniProtKB:P36603"],"synonyms":[{"name":"SPBC25D12.04","type":"related"},{"name":"SUC22","type":"related"},{"name":"Spom972h-suc22","type":"exact"}],"termid":"PR:P36603"}


id: GO:0021884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a neuron that resides in the forebrain, from its initial commitment to its fate, to the fully functional differentiated cell.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:jid","GOC:dph","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system neuron development","termid":"GO:0021954"},{"relation_name":"part_of","term_name":"forebrain neuron differentiation","termid":"GO:0021879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain neuron development","termid":"GO:0021884"}


id: PBO:0111516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agmatinase (putative)","termid":"PBO:0111516"}


id: GO:0044237
data:
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id: PBO:0086120
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for export of the ribosomal subunits; associates with the RNA components of the pre-ribosomes; has a role in nuclear import in association with Pse1p; also plays a role in the cell cycle and the DNA damage response; contains HEAT-repeats","termid":"PBO:0086120"}


id: GO:0001746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which the anatomical structures of the larval eye in Drosophila are generated and organized. The larval eye in Drosophila is a relatively simple sensory system composed of Bolwig's organs: two clusters, each composed of 12 photoreceptor cells from which axons extend in a single fascicle to the brain.","definition_xrefs":["PMID:6185380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye morphogenesis","termid":"GO:0048592"},{"relation_name":"part_of","term_name":"Bolwig's organ development","termid":"GO:0055034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Bolwig's organ morphogenesis","termid":"GO:0001746"}


id: GO:0014029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the specialized region of ectoderm between the neural ectoderm (neural plate) and non-neural ectoderm. The neural crest gives rise to the neural crest cells that migrate away from this region as neural tube formation proceeds.","definition_xrefs":["GOC:dh","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial to mesenchymal transition","termid":"GO:0001837"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"chordate embryonic development","termid":"GO:0043009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest formation","termid":"GO:0014029"}


id: GO:0075268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aecium development, a process in which a cuplike structure containing chains of aeciospores is formed.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of reproductive fruiting body development","termid":"GO:0031155"},{"relation_name":"regulates","term_name":"aecium development","termid":"GO:0075267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of aecium development","termid":"GO:0075268"}


id: PBO:0039776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 7 pseudogene 1","termid":"PBO:0039776"}


id: GO:0044472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with a resultant change in the activity of a calcium channel in the bitten organism.","definition_xrefs":["GOC:fj","GOC:jl","PMID:20920515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of ion channel activity in another organism","termid":"GO:0044560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in modulation of calcium channel activity in another organism","synonyms":[{"name":"envenomation resulting in modulation of calcium channel activity in other organism","type":"exact"}],"termid":"GO:0044472"}


id: GO:0034970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of a methyl group to arginine at position 2 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-R2 methylation (obsolete GO:0034970)","synonyms":[{"name":"histone H3 R2 methylation","type":"exact"},{"name":"histone H3R2me","type":"exact"},{"name":"histone lysine H3 R2 methylation","type":"exact"}],"termid":"GO:0034970"}


id: PBO:0042751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein V like 1","termid":"PBO:0042751"}


id: GO:0010691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the synthesis of RNA from ribosomal protein genes by RNA polymerase II, originating at an RNA polymerase II promoter, as a result of a stimulus reflecting the presence, absence, or concentration of nutrients.","definition_xrefs":["GOC:txnOH","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ribosomal protein gene transcription by RNA polymerase II","termid":"GO:0010688"},{"relation_name":"is_a","term_name":"cellular response to nutrient levels","termid":"GO:0031669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006355","GO:0006351"],"is_obsolete":false,"name":"negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter in response to nutrient levels","termid":"GO:0010691"}


id: GO:0060936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a cardiac fibroblast over time, from its formation to the mature state. A cardiac fibroblast is a connective tissue cell of the heart which secretes an extracellular matrix rich in collagen and other macromolecules.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac cell development","termid":"GO:0055006"},{"relation_name":"part_of","term_name":"cardiac fibroblast cell differentiation","termid":"GO:0060935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac fibroblast cell development","termid":"GO:0060936"}


id: GO:0004929
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with to a member of the Wnt-family of signaling molecules to initiate a change in cell activity.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete frizzled-2 receptor activity (obsolete GO:0004929)","synonyms":[{"name":"frizzled-2 receptor activity","type":"exact"}],"termid":"GO:0004929"}


id: GO:0060599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a branch forms along the side of a mammary duct.","definition_xrefs":["PMID:17120154","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral sprouting from an epithelium","termid":"GO:0060601"},{"relation_name":"part_of","term_name":"branching involved in mammary gland duct morphogenesis","termid":"GO:0060444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral sprouting involved in mammary gland duct morphogenesis","synonyms":[{"name":"mammary gland duct secondary branching","type":"exact"}],"termid":"GO:0060599"}


id: PBO:0002701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex subunit Caf16 (predicted)","termid":"PBO:0002701"}


id: PBO:0049480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1.4 linker histone, cluster member","termid":"PBO:0049480"}


id: GO:0031278
data:
  {"annotated_genes":["SJAG_03790","SJAG_01972","SJAG_03871","SJAG_02996","SJAG_04095","SJAG_04401"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89185,89186,89187,89188,94832,94833,94834,94835,94853,94854,94855,94856,95000,98818,114225],"is_not":false,"summary":null,"term":"GO:0031278"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a galactose residue from a donor molecule, such as GDP-galactose or UDP-galactose, to an oligosaccharide, forming an alpha-1,2-linkage.","definition_xrefs":["PMID:7522655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosyltransferase activity","termid":"GO:0008378"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01972":null,"SJAG_02996":null,"SJAG_03790":null,"SJAG_03871":null,"SJAG_04095":null,"SJAG_04401":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"alpha-1,2-galactosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031278","terms_by_termid":{"GO:0031278":null}}


id: GO:0060981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell from one site to another that will contribute to the formation of new blood vessels in the heart from pre-existing blood vessels.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in heart development","termid":"GO:0060973"},{"relation_name":"part_of","term_name":"angiogenesis involved in coronary vascular morphogenesis","termid":"GO:0060978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in coronary angiogenesis","termid":"GO:0060981"}


id: FYPO:0002120
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of sodium:hydrogen antiporter activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transmembrane transporter activity","termid":"FYPO:0002115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0002114"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0002114","FYPO:0000002"],"is_obsolete":false,"name":"normal sodium:hydrogen antiporter activity","termid":"FYPO:0002120"}


id: GO:1990645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of phosphorylases by removal of phosphate groups.","definition_xrefs":["PMID:8602837"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphorylase dephosphorylation (obsolete GO:1990645)","synonyms":[{"name":"phosphorylase dephosphorylation","type":"exact"}],"termid":"GO:1990645"}


id: PBO:0077110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 17B","termid":"PBO:0077110"}


id: FYPO:0001561
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-citrulline measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular citrulline level","synonyms":[{"name":"decreased cellular L-citrulline level","type":"exact"},{"name":"decreased cellular citrulline level during mitotic cell cycle","type":"related"},{"name":"decreased cellular citrulline level during vegetative growth","type":"exact"},{"name":"decreased citrulline accumulation","type":"related"},{"name":"reduced cellular citrulline level","type":"exact"}],"termid":"FYPO:0001561"}


id: PR:000027517
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ase1 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase spindle elongation protein 1","pombase_gene_id":"SPAPB1A10.09","synonyms":[{"name":"Ase1p","type":"exact"},{"name":"ase1","type":"exact"}],"termid":"PR:000027517"}


id: PBO:0039393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMZ2 pseudogene 2","termid":"PBO:0039393"}


id: PBO:0060605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear cap binding protein subunit 1","termid":"PBO:0060605"}


id: GO:0031392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of prostaglandin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of unsaturated fatty acid biosynthetic process","termid":"GO:2001279"},{"relation_name":"regulates","term_name":"prostaglandin biosynthetic process","termid":"GO:0001516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of prostaglandin biosynthetic process","synonyms":[{"name":"regulation of prostaglandin anabolism","type":"exact"},{"name":"regulation of prostaglandin biosynthesis","type":"exact"},{"name":"regulation of prostaglandin formation","type":"exact"},{"name":"regulation of prostaglandin synthesis","type":"exact"}],"termid":"GO:0031392"}


id: FYPO:0003789
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the frequency of occurrence of the second meiotic nuclear division, in which two chromatids in each chromosome are normally separated, is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased frequency of meiosis","termid":"FYPO:0000476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"decreased frequency of meiosis II","synonyms":[{"name":"decreased frequency of second meiotic nuclear division","type":"exact"},{"name":"decreased meiosis II","type":"exact"},{"name":"meiosis II: decreased frequency","type":"exact"},{"name":"reduced frequency of meiosis II","type":"exact"}],"termid":"FYPO:0003789"}


id: GO:0050831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A set of reactions, specific to males, that are triggered in response to the presence of a bacterium that act to protect the cell or organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response to bacterium","termid":"GO:0042742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male-specific defense response to bacterium","synonyms":[{"name":"male-specific antibacterial peptide activity","type":"related"},{"name":"male-specific defence response to bacteria","type":"exact"},{"name":"male-specific defence response to bacterium","type":"exact"},{"name":"male-specific defense response to bacteria","type":"exact"}],"termid":"GO:0050831"}


id: PBO:0050924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFITM3 pseudogene 7","termid":"PBO:0050924"}


id: GO:0014712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of branchiomeric skeletal muscle development. Branchiomeric skeletal muscle development is the process whose specific outcome is the progression of the branchiomeric skeletal muscle over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of branchiomeric skeletal muscle development","termid":"GO:0014711"},{"relation_name":"is_a","term_name":"positive regulation of skeletal muscle tissue development","termid":"GO:0048643"},{"relation_name":"positively_regulates","term_name":"branchiomeric skeletal muscle development","termid":"GO:0014707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of branchiomeric skeletal muscle development","termid":"GO:0014712"}


id: FYPO:0006187
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actomyosin contractile ring assembly is normal (i.e. indistinguishable from wild type). Contractile ring assembly is the part of cytokinesis in which the actomyosin contractile ring is formed of actin, myosin, and associated proteins.","definition_xrefs":["PomBase:mah","GO:1903475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actomyosin contractile ring assembly","termid":"FYPO:0001368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal rate of actomyosin contractile ring assembly","synonyms":[{"name":"normal rate of actomyosin contractile ring assembly during mitotic cell cycle","type":"related"},{"name":"normal rate of actomyosin contractile ring assembly during vegetative growth","type":"exact"},{"name":"normal rate of contractile ring assembly","type":"exact"},{"name":"normal rate of cytokinetic contractile ring assembly","type":"exact"},{"name":"normal rate of mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"normal rate of mitotic contractile ring assembly","type":"exact"}],"termid":"FYPO:0006187"}


id: GO:0007600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a sensory stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["GOC:dph","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process","termid":"GO:0050877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception","secondary_identifiers":["Wikipedia:Perception"],"termid":"GO:0007600"}


id: PBO:0061853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactomedin 3","termid":"PBO:0061853"}


id: PBO:0017830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A dioxygenase Ofd2","termid":"PBO:0017830"}


id: PBO:0063533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ and pleckstrin homology domains 1, pseudogene","termid":"PBO:0063533"}


id: PBO:0002564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sm snRNP core protein Smd1","termid":"PBO:0002564"}


id: PBO:0061821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 11 Y-linked","termid":"PBO:0061821"}


id: GO:0045983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving purine bases.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of purine nucleobase metabolic process","termid":"GO:0006141"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"purine nucleobase metabolic process","termid":"GO:0006144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of purine nucleobase metabolic process","synonyms":[{"name":"activation of purine base metabolic process","type":"narrow"},{"name":"positive regulation of purine base metabolic process","type":"exact"},{"name":"positive regulation of purine base metabolism","type":"exact"},{"name":"stimulation of purine base metabolic process","type":"narrow"},{"name":"up regulation of purine base metabolic process","type":"exact"},{"name":"up-regulation of purine base metabolic process","type":"exact"},{"name":"upregulation of purine base metabolic process","type":"exact"}],"termid":"GO:0045983"}


id: FYPO:0009108
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the spindle pole bodies (SPBs) of daughter nuclei are misoriented during mitotic telophase. Normally, SPBs face the cell tips at the end of anaphase when the spindle disassembles, but as microtubules are nucleated from SPBs and telophase nuclear positioning proceeds, the SPBs tend to face the cell equator.","definition_xrefs":["PMID:37099380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype","termid":"FYPO:0000136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"abnormal spindle pole body orientation during mitotic telophase","synonyms":[{"name":"abnormal spindle pole body angle during mitotic telophase","type":"exact"},{"name":"abnormal spindle pole body positioning within the nucleus during mitotic telophase","type":"exact"},{"name":"spindle pole body facing cell tips during mitotic telophase","type":"related"}],"termid":"FYPO:0009108"}


id: PBO:0077669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 14","termid":"PBO:0077669"}


id: PBO:0076304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptogyrin 2","termid":"PBO:0076304"}


id: PBO:0067607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 775, pseudogene","termid":"PBO:0067607"}


id: PBO:0047972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Frey regulator of sperm-oocyte fusion 1","termid":"PBO:0047972"}


id: FYPO:0005648
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which sister kinetochores separate during the first meiotic nuclear division. Normally sister kinetochores remain together until meiosis II.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"sister kinetochore dissociation in meiotic metaphase I","synonyms":[{"name":"decreased meiosis I sister kinetochore fusion","type":"narrow"},{"name":"decreased meiotic sister kinetochore association in meiotic metaphase I","type":"exact"},{"name":"precocious centromeric dissociation during meiosis I","type":"exact"},{"name":"premature sister kinetochore separation during meiosis I","type":"exact"},{"name":"sister kinetochore separation during first meiotic nuclear division","type":"exact"},{"name":"sister kinetochore separation during meiosis I","type":"exact"},{"name":"split kinetochores during meiosis I","type":"related"}],"termid":"FYPO:0005648"}


id: PBO:0002318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amylase homolog (predicted)","termid":"PBO:0002318"}


id: PBO:0081751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF680 pseudogene 1","termid":"PBO:0081751"}


id: GO:0046307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of Z-phenylacetaldoxime, a member of the glucosinolate group of compounds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"Z-phenylacetaldoxime metabolic process","termid":"GO:0018983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Z-phenylacetaldoxime biosynthetic process","synonyms":[{"name":"Z-phenylacetaldoxime anabolism","type":"exact"},{"name":"Z-phenylacetaldoxime biosynthesis","type":"exact"},{"name":"Z-phenylacetaldoxime formation","type":"exact"},{"name":"Z-phenylacetaldoxime synthesis","type":"exact"}],"termid":"GO:0046307"}


id: GO:0120513
data:
  {"annotated_genes":["SJAG_01058","SJAG_04085"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[101360,105840],"is_not":false,"summary":null,"term":"GO:0120513"}]},"cv_name":"cellular_component","definition":"A protein complex capable of catalysing the transfer of the 3-amino-3-carboxypropyl group from S-adenosyl-L-methionine (SAM) to the histidine residue of translation elongation factor 2 (EF2), which is the first step in the biosynthesis of diphthamide. The complex is a Dph2 homodimer in archaea and a Dph1-Dph2 heterodimer in eukaryotes.","definition_xrefs":["PMID:24422557","PMID:31463593","GOC:sjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01058":null,"SJAG_04085":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"2-(3-amino-3-carboxypropyl)histidine synthase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Dph1-Dph2 complex","type":"exact"}],"termid":"GO:0120513","terms_by_termid":{"GO:0120513":null}}


id: PBO:0046361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosulfine alpha pseudogene 3","termid":"PBO:0046361"}


id: MOD:00161
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-glucosylated L-cysteine.","definition_xrefs":["PubMed:1145128","PubMed:5286858","RESID:AA0152","PubMed:15279557","Unimod:41#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-glycosylated residue","termid":"MOD:00426"},{"relation_name":"is_a","term_name":"glucosylated residue","termid":"MOD:00433"},{"relation_name":"is_a","term_name":"monohexosylated (Hex1)","termid":"MOD:00761"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"S-glucosyl-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-[(beta-D-glucopyranosyl)sulfanyl]propanoic acid","type":"exact"},{"name":"CARBOHYD S-linked (Glc) cysteine","type":"exact"},{"name":"Hex","type":"related"},{"name":"Hexose","type":"related"},{"name":"S-(beta-D-glucopyranosyl)cysteine","type":"exact"},{"name":"S-glucosyl-L-cysteine","type":"exact"},{"name":"S-glycosyl-cysteine","type":"exact"},{"name":"SGlcCys","type":"exact"}],"termid":"MOD:00161"}


id: GO:0005749
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Contains the four polypeptide subunits of succinate dehydrogenase, flavin-adenine dinucleotide and iron-sulfur. Catalyzes the oxidation of succinate by ubiquinone. Connects the TCA cycle with the respiratory chain.","definition_xrefs":["GOC:vw","ISBN:0198547684","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) (obsolete GO:0005749)","synonyms":[{"name":"mitochondrial fumarate reductase complex","type":"exact"}],"termid":"GO:0005749"}


id: MOD:00856
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to an L-alaninium (protonated L-alanine).","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"},{"relation_name":"is_a","term_name":"alpha-amino protonated residue","termid":"MOD:01700"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protonated L-alanine (L-alaninium) residue","termid":"MOD:00856"}


id: PBO:0078256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 30","termid":"PBO:0078256"}


id: PBO:0046501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERI1 exoribonuclease family member 2","termid":"PBO:0046501"}


id: PBO:0035885
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-asymmetric_mitochondrial_aggregation","termid":"PBO:0035885"}


id: PBO:0060453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase","termid":"PBO:0060453"}


id: PBO:0045069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLGAP1 antisense RNA 1","termid":"PBO:0045069"}


id: FYPO:0004105
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115510],"is_not":false,"summary":null,"term":"FYPO:0004105"}],"single_locus_phenotype":[{"annotations":[115494],"is_not":false,"summary":null,"term":"FYPO:0004105"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which polar cell growth does not occur. Cells grow without polarization, instead of growing only at the ends.","definition_xrefs":["PMID:8187760","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell growth","termid":"FYPO:0003154"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00514":null,"SJAG_04522":null},"genotype_count":2,"genotypes_by_uniquename":{"rga4delta__rga6delta":{"display_name":"rga4delta rga6delta","display_uniquename":"rga4delta__rga6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04522","SJAG_00028"],"name":"abolished polar cell growth","references_by_uniquename":{"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_00514"],"single_locus_genotype_uniquenames":["scd1delta"],"synonyms":[{"name":"abolished polar vegetative cell growth","type":"exact"},{"name":"abolished polarized cell growth","type":"exact"},{"name":"abolished unidimensional cell growth","type":"exact"},{"name":"depolarized cell growth","type":"exact"}],"termid":"FYPO:0004105","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0004105":null,"FYPO_EXT:0000001":null}}


id: GO:1900519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to pullulan.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of response to pullulan","termid":"GO:1900518"},{"relation_name":"negatively_regulates","term_name":"response to pullulan","termid":"GO:0044592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to pullulan","synonyms":[{"name":"down regulation of response to pullulan","type":"exact"},{"name":"down-regulation of response to pullulan","type":"exact"},{"name":"downregulation of response to pullulan","type":"exact"},{"name":"inhibition of response to pullulan","type":"narrow"}],"termid":"GO:1900519"}


id: PBO:0012251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIP complex subunit 4, Csc4","termid":"PBO:0012251"}


id: PBO:0061044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPA2 pseudogene 5","termid":"PBO:0061044"}


id: PBO:0061534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMDA receptor synaptonuclear signaling and neuronal migration factor","termid":"PBO:0061534"}


id: PBO:0005367
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic liver disease","termid":"PBO:0005367"}


id: FYPO:0007894
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which ubiquitination of lysine at position 119 of histone H2B is increased at subtelomeric heterochromatin. Lysine 119 corresponds to the conserved C-terminal lysine of H2B.","definition_xrefs":["PMID:34731638"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein ubiquitination during vegetative growth","termid":"FYPO:0002082"},{"relation_name":"is_a","term_name":"abnormal histone H2B-K119 ubiquitination during vegetative growth","termid":"FYPO:0005607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0002494","FYPO:0002274","FYPO:0001320"],"is_obsolete":false,"name":"increased histone H2B-K119 ubiquitination at subtelomeric heterochromatin","termid":"FYPO:0007894"}


id: GO:0030660
data:
  {"annotated_genes":["SJAG_04391","SJAG_01508","SJAG_04070","SJAG_04569","SJAG_00379","SJAG_04565","SJAG_04474","SJAG_02282","SJAG_01809","SJAG_04002","SJAG_04609","SJAG_00192","SJAG_04517","SJAG_02482","SJAG_02234"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[109153,115056,108932,97208],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[90931,109057],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"},{"annotations":[103247,100234,109907,89253,94527,94616,112546,113579,99372],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030126"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a vesicle associated with the Golgi apparatus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"Golgi-associated vesicle","termid":"GO:0005798"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00192":null,"SJAG_00379":null,"SJAG_01508":null,"SJAG_01809":null,"SJAG_02234":null,"SJAG_02282":null,"SJAG_02482":null,"SJAG_04002":null,"SJAG_04070":null,"SJAG_04391":null,"SJAG_04474":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04569":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"Golgi-associated vesicle membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Golgi vesicle membrane","type":"related"}],"termid":"GO:0030660","terms_by_termid":{"GO:0030121":null,"GO:0030126":null,"GO:0030130":null}}


id: GO:0004802
data:
  {"annotated_genes":["SJAG_03934"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104560],"is_not":false,"summary":null,"term":"GO:0004802"}]},"cv_name":"molecular_function","definition":"Catalysis of the reversible transfer of a 2-carbon ketol group (CH2OH-CO-) from a ketose phosphate donor to an aldose phosphate acceptor.","definition_xrefs":["RHEA:10508","GOC:fmc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transketolase or transaldolase activity","termid":"GO:0016744"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03934":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016744"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016744","GO:0003674"],"is_obsolete":false,"name":"transketolase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-71324","Reactome:R-HSA-71335","Reactome:R-HSA-163741","Reactome:R-HSA-163751","EC:2.2.1.1","MetaCyc:1TRANSKETO-RXN"],"synonyms":[{"name":"fructose 6-phosphate:D-glyceraldehyde-3-phosphate glycolaldehydetransferase activity","type":"narrow"},{"name":"glycoaldehyde transferase activity","type":"related"},{"name":"glycolaldehydetransferase activity","type":"related"},{"name":"sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glycolaldehydetransferase activity","type":"narrow"}],"termid":"GO:0004802","terms_by_termid":{"GO:0004802":null}}


id: PBO:0011079
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae ABD1","termid":"PBO:0011079"}


id: FYPO:0000667
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a peptidase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal peptidase activity","termid":"FYPO:0000666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"increased peptidase activity","synonyms":[{"name":"increased protease activity","type":"exact"}],"termid":"FYPO:0000667"}


id: GO:0005709
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A chromosome found in the cell during prophase.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete prophase chromosome (obsolete GO:0005709)","synonyms":[{"name":"prophase chromosome","type":"exact"}],"termid":"GO:0005709"}


id: PBO:0057785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3065","termid":"PBO:0057785"}


id: GO:1901305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of spermidine biosynthetic process.","definition_xrefs":["GOC:pm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of amine metabolic process","termid":"GO:0033239"},{"relation_name":"is_a","term_name":"regulation of spermidine biosynthetic process","termid":"GO:1901304"},{"relation_name":"negatively_regulates","term_name":"spermidine biosynthetic process","termid":"GO:0008295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of spermidine biosynthetic process","synonyms":[{"name":"down regulation of spermidine anabolism","type":"exact"},{"name":"down regulation of spermidine biosynthesis","type":"exact"},{"name":"down regulation of spermidine biosynthetic process","type":"exact"},{"name":"down regulation of spermidine formation","type":"exact"},{"name":"down regulation of spermidine synthesis","type":"exact"},{"name":"down-regulation of spermidine anabolism","type":"exact"},{"name":"down-regulation of spermidine biosynthesis","type":"exact"},{"name":"down-regulation of spermidine biosynthetic process","type":"exact"},{"name":"down-regulation of spermidine formation","type":"exact"},{"name":"down-regulation of spermidine synthesis","type":"exact"},{"name":"downregulation of spermidine anabolism","type":"exact"},{"name":"downregulation of spermidine biosynthesis","type":"exact"},{"name":"downregulation of spermidine biosynthetic process","type":"exact"},{"name":"downregulation of spermidine formation","type":"exact"},{"name":"downregulation of spermidine synthesis","type":"exact"},{"name":"inhibition of spermidine anabolism","type":"exact"},{"name":"inhibition of spermidine biosynthesis","type":"exact"},{"name":"inhibition of spermidine biosynthetic process","type":"narrow"},{"name":"inhibition of spermidine formation","type":"exact"},{"name":"inhibition of spermidine synthesis","type":"exact"},{"name":"negative regulation of spermidine anabolism","type":"exact"},{"name":"negative regulation of spermidine biosynthesis","type":"exact"},{"name":"negative regulation of spermidine formation","type":"exact"},{"name":"negative regulation of spermidine synthesis","type":"exact"}],"termid":"GO:1901305"}


id: GO:0005121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Toll protein, a transmembrane receptor.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"Toll binding","synonyms":[{"name":"Tl binding","type":"exact"},{"name":"Toll ligand","type":"narrow"},{"name":"Toll receptor binding","type":"exact"}],"termid":"GO:0005121"}


id: GO:0019572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-arabinose, the L-enantiomer of arabino-pentose.","definition_xrefs":["GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arabinose catabolic process","termid":"GO:0019568"},{"relation_name":"is_a","term_name":"L-arabinose metabolic process","termid":"GO:0046373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"L-arabinose catabolic process","synonyms":[{"name":"L-arabinose catabolism","type":"exact"},{"name":"L-arabinose degradation","type":"exact"},{"name":"L-arabinose breakdown","type":"exact"}],"termid":"GO:0019572"}


id: GO:0048912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a glial cell along the axons in the anterior lateral line nerve.","definition_xrefs":["PMID:12062041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line nerve glial cell migration","termid":"GO:0048896"},{"relation_name":"part_of","term_name":"anterior lateral line nerve development","termid":"GO:0048909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell migration in anterior lateral line nerve","termid":"GO:0048912"}


id: PBO:0056438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 11","termid":"PBO:0056438"}


id: PBO:0088874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acylpeptide hydrolase","termid":"PBO:0088874"}


id: PBO:0084597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YJL021C was originally annotated as an independent ORF but due to a sequence change was merged with an adjacent ORF into a single reading frame, designated YJL020C/BBC1","termid":"PBO:0084597"}


id: PBO:0090483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate O-acyltransferase Vps66","termid":"PBO:0090483"}


id: PBO:0057170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 323a","termid":"PBO:0057170"}


id: PBO:0062879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTX2 antisense RNA 1 (head to head)","termid":"PBO:0062879"}


id: GO:0046693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The retention of sperm by a female following mating.","definition_xrefs":["PMID:10885514"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sperm competition","termid":"GO:0046692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sperm storage","synonyms":[{"name":"retention of sperm","type":"exact"},{"name":"sequestering of sperm","type":"exact"},{"name":"sequestration of sperm","type":"exact"},{"name":"sperm retention","type":"exact"},{"name":"sperm sequestering","type":"exact"},{"name":"sperm sequestration","type":"exact"},{"name":"storage of sperm","type":"exact"}],"termid":"GO:0046693"}


id: GO:0050942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pigment cell differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"positive regulation of developmental pigmentation","termid":"GO:0048087"},{"relation_name":"is_a","term_name":"regulation of pigment cell differentiation","termid":"GO:0050932"},{"relation_name":"positively_regulates","term_name":"pigment cell differentiation","termid":"GO:0050931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pigment cell differentiation","synonyms":[{"name":"activation of pigment cell differentiation","type":"narrow"},{"name":"stimulation of pigment cell differentiation","type":"narrow"},{"name":"up regulation of pigment cell differentiation","type":"exact"},{"name":"up-regulation of pigment cell differentiation","type":"exact"},{"name":"upregulation of pigment cell differentiation","type":"exact"}],"termid":"GO:0050942"}


id: PBO:0078393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 3-1","termid":"PBO:0078393"}


id: RO:0002465
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"interaction_relation_helper_property","termid":"RO:0002563"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_symbiosis","termid":"RO:0002465"}


id: GO:0140567
data:
  {"annotated_genes":["SJAG_04203","SJAG_01435"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97104,112482],"is_not":false,"summary":null,"term":"GO:0140567"}]},"cv_name":"molecular_function","definition":"The activity of removing a protein from a membrane, by binding to a transmembrane helical fragment of a tail-anchored protein and releasing it from the the hydrophobic region of one or both lipid bilayers. The reaction is driven by ATP hydrolysis.","definition_xrefs":["PMID:28712723","PMID:32973005","PMID:24821790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transporter activity","termid":"GO:0140318"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01435":null,"SJAG_04203":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140318"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0140318","GO:0005215"],"is_obsolete":false,"name":"membrane protein dislocase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"transmembrane helix dislocasentransmembrane protein dislocase activity","type":"related"}],"termid":"GO:0140567","terms_by_termid":{"GO:0140567":null}}


id: PBO:0064856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 14D","termid":"PBO:0064856"}


id: GO:0045194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of oxidized low-density lipoproteins.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidized low-density lipoprotein catabolic process (obsolete GO:0045194)","synonyms":[{"name":"Ox-LDL catabolic process","type":"exact"},{"name":"Ox-LDL catabolism","type":"exact"},{"name":"oxidized low-density lipoprotein breakdown","type":"exact"},{"name":"oxidized low-density lipoprotein catabolic process","type":"exact"},{"name":"oxidized low-density lipoprotein catabolism","type":"exact"},{"name":"oxidized low-density lipoprotein degradation","type":"exact"}],"termid":"GO:0045194"}


id: PBO:0086814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YLR152C is not an essential gene","termid":"PBO:0086814"}


id: GO:0038201
data:
  {"annotated_genes":["SJAG_00117","SJAG_03067","SJAG_00167","SJAG_02723","SJAG_01509","SJAG_04460","SJAG_01320","SJAG_01020","SJAG_04987","SJAG_00756","SJAG_01703"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[111084,109182,62133,102760,102795,94629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031931"},{"annotations":[98827,102796,104702,114555,62134,95458,97841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031932"}]},"cv_name":"cellular_component","definition":"A protein complex that contains at least TOR (target of rapamycin) in complex with other signaling components. Mediates the phosphorylation and activation of downstream signaling components including PKB (AKT) or S6K.","definition_xrefs":["Wikipedia:MTORC2","Wikipedia:MTORC1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00117":null,"SJAG_00167":null,"SJAG_00756":null,"SJAG_01020":null,"SJAG_01320":null,"SJAG_01509":null,"SJAG_01703":null,"SJAG_02723":null,"SJAG_03067":null,"SJAG_04460":null,"SJAG_04987":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"TOR complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"target of rapamycin complex","type":"exact"},{"name":"TOR signaling complex","type":"exact"},{"name":"mTOR complex","type":"narrow"}],"termid":"GO:0038201","terms_by_termid":{"GO:0031931":null,"GO:0031932":null}}


id: GO:0044473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant stopping, prevention or reduction of the activity of a calcium channel in the bitten organism.","definition_xrefs":["PMID:20920515","GOC:fj","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of calcium channel activity in another organism","termid":"GO:0044472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in negative regulation of calcium channel activity in another organism","synonyms":[{"name":"envenomation resulting in negative regulation of calcium channel activity in other organism","type":"exact"}],"termid":"GO:0044473"}


id: PBO:0071644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 8","termid":"PBO:0071644"}


id: GO:0032490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a molecule of bacterial origin is received and converted into a molecular signal.","definition_xrefs":["GOC:rl","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to molecule of bacterial origin","termid":"GO:0002237"},{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"detection of external biotic stimulus","termid":"GO:0098581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of molecule of bacterial origin","synonyms":[{"name":"detection of bacteria associated molecule","type":"exact"},{"name":"detection of bacterial associated molecule","type":"exact"},{"name":"detection of bacterium associated molecule","type":"exact"}],"termid":"GO:0032490"}


id: PBO:0082938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic class E vacuolar protein sorting (VPS) factor; coordinates protein sorting and deubiquitination in the multivesicular body (MVB) pathway by recruiting Doa4p to endosomes","termid":"PBO:0082938"}


id: GO:0044614
data:
  {"annotated_genes":["SJAG_01065","SJAG_03847","SJAG_01013","SJAG_03299"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85038,90028,99101,104824],"is_not":false,"summary":null,"term":"GO:0044614"}]},"cv_name":"cellular_component","definition":"Filamentous extensions on cytoplasmic face of the nuclear pore complex (NPC). In S. cerevisiae, Nup159p, Nup82p, and Nup42p contribute to the cytoplasmic filaments. In vertebrates, Nup358 is a major component.","definition_xrefs":["PMID:22419078","PMID:20947011","GOC:dgf","PMID:18046406","PMID:19524430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear pore","termid":"GO:0005643"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01013":null,"SJAG_01065":null,"SJAG_03299":null,"SJAG_03847":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005643"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005643","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nuclear pore cytoplasmic filaments","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytoplasmic fibers of the NPC","type":"exact"},{"name":"cytoplasmic fibers of the nuclear pore complex","type":"exact"}],"termid":"GO:0044614","terms_by_termid":{"GO:0044614":null}}


id: SO:1000148
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal translocation whereby the first two breaks are in the same chromosome, and the region between them is rejoined in inverted order to the other side of the first break, such that both sides of break one are present on the same chromosome. The remaining free ends are joined as a translocation with those resulting from the third break.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"has_part","term_name":"inversion","termid":"SO:1000036"},{"relation_name":"is_a","term_name":"chromosomal_inversion","termid":"SO:1000030"},{"relation_name":"is_a","term_name":"chromosomal_translocation","termid":"SO:1000044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inversion_cum_translocation","synonyms":[{"name":"(Drosophila)InT","type":"related"},{"name":"(Drosophila)T","type":"related"},{"name":"inversion cum translocation","type":"exact"}],"termid":"SO:1000148"}


id: PBO:0005577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L39","termid":"PBO:0005577"}


id: PBO:0034790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit Hfi1/Ada1","termid":"PBO:0034790"}


id: GO:0070414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving trehalose that occur as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.","definition_xrefs":["GOC:mah","PMID:9797333","GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trehalose metabolism in response to stress","termid":"GO:0070413"},{"relation_name":"part_of","term_name":"cellular response to heat","termid":"GO:0034605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"trehalose metabolism in response to heat stress","synonyms":[{"name":"trehalose metabolic process involved in response to heat stress","type":"exact"}],"termid":"GO:0070414"}


id: PBO:0111839
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin Kar3 subfamily","termid":"PBO:0111839"}


id: PBO:0045651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 9","termid":"PBO:0045651"}


id: PBO:0061310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephrocystin 3","termid":"PBO:0061310"}


id: SO:0001768
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"When a variant has become fixed in the population so that it is now the only variant.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_frequency","termid":"SO:0001763"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fixed_variant","synonyms":[{"name":"fixed variant","type":"exact"}],"termid":"SO:0001768"}


id: PBO:0075396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sp9 transcription factor","termid":"PBO:0075396"}


id: PR:Q9P3U4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dbl4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3U4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase dbl4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC328.02","synonyms":[{"name":"DNA-break-localizing protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-dbl4","type":"exact"},{"name":"histone E3 ligase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P3U4"}


id: PBO:0043963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin gamma N","termid":"PBO:0043963"}


id: PBO:0052671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 39","termid":"PBO:0052671"}


id: GO:0033260
data:
  {"annotated_genes":["SJAG_02039","SJAG_04671","SJAG_02908","SJAG_03855","SJAG_02348","SJAG_02394","SJAG_01210","SJAG_00198","SJAG_01267","SJAG_01010","SJAG_01677","SJAG_05180","SJAG_02800","SJAG_01410","SJAG_00729","SJAG_03898","SJAG_02294","SJAG_01076","SJAG_03695","SJAG_00573","SJAG_02627","SJAG_01624","SJAG_01068","SJAG_04341","SJAG_02162","SJAG_00311","SJAG_01832","SJAG_04272","SJAG_00884","SJAG_01354","SJAG_02182","SJAG_00364","SJAG_02199","SJAG_06022","SJAG_04879","SJAG_03722","SJAG_01221","SJAG_01374","SJAG_02079","SJAG_04190","SJAG_05197","SJAG_03843","SJAG_00618","SJAG_01762","SJAG_02439","SJAG_02822","SJAG_03780","SJAG_04210","SJAG_02992","SJAG_03438","SJAG_03451","SJAG_02667","SJAG_04994","SJAG_02098","SJAG_00272","SJAG_00327","SJAG_04995","SJAG_04183","SJAG_00728","SJAG_00247","SJAG_02690","SJAG_02818","SJAG_00814","SJAG_00863","SJAG_00874","SJAG_05239","SJAG_03495","SJAG_03525","SJAG_00400","SJAG_01823","SJAG_04150","SJAG_02198","SJAG_03720","SJAG_01884","SJAG_00696","SJAG_04877","SJAG_05232","SJAG_03048","SJAG_02607","SJAG_03160","SJAG_00399","SJAG_02172","SJAG_03927","SJAG_02074","SJAG_00857","SJAG_05301","SJAG_00536","SJAG_04816"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109722,106079,103473,111569],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140529"},{"annotations":[103372,109313,109723,98930,100339,90003,91316,108666,111571,85607,105244,106082,111440,103475,108427,91282,111267,101044,91100,103107],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902983"},{"annotations":[99426],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140530"},{"annotations":[94191,107699,95361,108053,108981,102540,85620,100539,112429,103965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902969"},{"annotations":[93393,111269,108185,107531,102541,106360,87983,111573,107792,109725,104181,86470,109335,109641,103374,108589,99063,103967,95497,95504,101448,90593,103477,108054,89982,93498,89015,106698,109314,111442,113514],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902975"},{"annotations":[98932,105246,100343,114358,101046,91284],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903459"},{"annotations":[103478,91285,91317,103108,90005,85608,100344,101047],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903460"},{"annotations":[105261,107909],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990505"},{"annotations":[95505,106699,86471],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902977"},{"annotations":[99428,111182,106700],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902985"},{"annotations":[95141,112983,108669,90867,105686,94325,105217,103887,92067,91115,95025,85201,86975,103863,92233],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990426"},{"annotations":[113029,105023],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903464"},{"annotations":[105024,98465,93840],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903467"},{"annotations":[93499,99064],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902315"},{"annotations":[88584,91102,96730,96694,88673,97587,100269],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903461"},{"annotations":[108188,99429,113453],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903468"},{"annotations":[102733,98471,85093,112408],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1904514"},{"annotations":[98475],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903465"},{"annotations":[91286,103480,87984,100444,93500,111270,111443,102542,106361,103375,107701,111444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006279"},{"annotations":[95440],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903466"},{"annotations":[100270,99054,84341,108670],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903469"}]},"cv_name":"biological_process","definition":"The DNA-dependent DNA replication that occurs in the nucleus of eukaryotic organisms as part of the cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle DNA 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id: PR:O94579
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit alpha type-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11599:SF16","OMA:SCHPO04818","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha type-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.06","secondary_identifiers":["UniProtKB:O94579"],"synonyms":[{"name":"Spom972h-PSMA2","type":"exact"}],"termid":"PR:O94579"}


id: PBO:0068079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 385","termid":"PBO:0068079"}


id: PBO:0051349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2D-38 (pseudogene)","termid":"PBO:0051349"}


id: PBO:0086899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transporter, member of the sugar porter family; localizes to the vacuolar membrane; non-essential gene; upregulated by and required for tolerance to 4-Methylcyclohexane methanol; YBR241C has a paralog, VPS73, that arose from the whole genome duplication","termid":"PBO:0086899"}


id: PBO:0005771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human CTD-binding SR-like protein rA9 homolog (predicted)","termid":"PBO:0005771"}


id: PBO:0079683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3D","termid":"PBO:0079683"}


id: PBO:0003919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type m-specific polypeptide mc 1","termid":"PBO:0003919"}


id: GO:0061311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand the binding to its receptor on the surface of a cell, which contributes to the progression of the heart over time.","definition_xrefs":["GOC:mtg_heart","GOC:signaling","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cell surface receptor signaling pathway involved in heart development","synonyms":[{"name":"cell surface receptor linked signaling pathway involved in heart development","type":"exact"},{"name":"cell surface receptor linked signalling pathway involved in heart development","type":"exact"}],"termid":"GO:0061311"}


id: PBO:0045595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 6 (pseudogene)","termid":"PBO:0045595"}


id: PBO:0044121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 7, pseudogene","termid":"PBO:0044121"}


id: GO:0071335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of hair follicle cells, resulting in the expansion of a cell population.","definition_xrefs":["GOC:rph","PMID:16086254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hair follicle cell proliferation","termid":"GO:0071335"}


id: PBO:0002336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial citrate transporter (predicted)","termid":"PBO:0002336"}


id: PBO:0061868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory marker protein","termid":"PBO:0061868"}


id: PBO:0057203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 374b","termid":"PBO:0057203"}


id: PBO:0082182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGC-type S/T protein kinase; participates in the cell wall integrity signaling pathway; involved with Ypk1p in the TORC-dependent phosphorylation of ribosomal proteins Rps6a/b (S6), and in the direct phosphorylation of the Myo5p motor domain TEDS site; phosphorylated and activated by Pkh1/2p in the presence of phytosphingosine; direct phosphorylation by Tor2p regulates actin polarization; genetically redundant with YPK1; human homolog SGK2 can complement the inviability of a ypk1 ypk2 mutant","termid":"PBO:0082182"}


id: PBO:0049115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 179","termid":"PBO:0049115"}


id: GO:0046045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of TMP, ribosylthymine monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside monophosphate catabolic process","termid":"GO:0009175"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide catabolic process","termid":"GO:0009222"},{"relation_name":"is_a","term_name":"TMP metabolic process","termid":"GO:0046044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"TMP catabolic process","synonyms":[{"name":"TMP breakdown","type":"exact"},{"name":"TMP catabolism","type":"exact"},{"name":"TMP degradation","type":"exact"}],"termid":"GO:0046045"}


id: PBO:0082409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BET family transcriptional regulator; associates with TFIID, and is involved in transcription initiation at TATA-containing promoters; essential for meiosis and expression of meiosis-specific genes;  binds acetylated histone H4 at double-strand break (DSB) sites, and promotes end resection, loading of RPA and Rad51p and ds break repair by homologous recombination; contains two bromodomains that correspond to the C-terminal region of mammalian TAF1; partially redundant with paralog Bdf2p","termid":"PBO:0082409"}


id: PBO:0057599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 936","termid":"PBO:0057599"}


id: PBO:0014236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase involved in ubiquitin-mediated protein degradation Cdc48","termid":"PBO:0014236"}


id: GO:0045461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sterigmatocystin, a carcinogenic mycotoxin produced in high yields by strains of the common molds.","definition_xrefs":["PMID:10618248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin biosynthetic process","termid":"GO:0009403"},{"relation_name":"is_a","term_name":"sterigmatocystin metabolic process","termid":"GO:0045460"},{"relation_name":"is_a","term_name":"organic heteropentacyclic compound biosynthetic process","termid":"GO:1901378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"sterigmatocystin biosynthetic process","synonyms":[{"name":"sterigmatocystin anabolism","type":"exact"},{"name":"sterigmatocystin biosynthesis","type":"exact"},{"name":"sterigmatocystin formation","type":"exact"},{"name":"sterigmatocystin synthesis","type":"exact"}],"termid":"GO:0045461"}


id: GO:0140029
data:
  {"annotated_genes":["SJAG_03357","SJAG_02587","SJAG_03864","SJAG_01697","SJAG_00280","SJAG_04966","SJAG_02320","SJAG_03005","SJAG_01772","SJAG_03499","SJAG_04960","SJAG_02166","SJAG_04044","SJAG_03938","SJAG_01925"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114608,85753,113686,114389,96338,88354,86605,115014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006904"},{"annotations":[84659,98008,110317,86780,113909,110027,115015,95630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090522"}]},"cv_name":"biological_process","definition":"The cellular processes that contribute to exocytosis.","definition_xrefs":["Wikipedia:Exocytosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"part_of","term_name":"exocytosis","termid":"GO:0006887"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00280":null,"SJAG_01697":null,"SJAG_01772":null,"SJAG_01925":null,"SJAG_02166":null,"SJAG_02320":null,"SJAG_02587":null,"SJAG_03005":null,"SJAG_03357":null,"SJAG_03499":null,"SJAG_03864":null,"SJAG_03938":null,"SJAG_04044":null,"SJAG_04960":null,"SJAG_04966":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"exocytic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140029","terms_by_termid":{"GO:0006904":null,"GO:0090522":null}}


id: FYPO:0005988
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which microtubule anchoring at the cell cortex of the cell tip does not occur during the meiotic cell cycle. Normally, anchoring maintains the localization of microtubules with their plus ends at the cell cortex.","definition_xrefs":["PomBase:mah","PMID:25736293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal protein localization during meiotic cell cycle","termid":"FYPO:0004094"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip","termid":"FYPO:0005987"},{"relation_name":"is_a","term_name":"localization phenotype during meiotic cell cycle","termid":"FYPO:0006393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"abolished microtubule anchoring at cell cortex of cell tip during meiotic cell cycle","synonyms":[{"name":"abolished microtubule anchoring at cell tip cortex during meiotic cell cycle","type":"exact"},{"name":"abolished microtubule cortical anchoring at cell tip during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0005988"}


id: PBO:0045881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 delta pseudogene 5","termid":"PBO:0045881"}


id: PBO:0110321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 1 (ABCC1 blood group)","termid":"PBO:0110321"}


id: FYPO:0006770
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which kinetochore disassembly is abnormal during prophase of meiosis I. Normally, outer kinetochore components delocalize from the centromere during bouquet formation in meiotic prophase I.","definition_xrefs":["PomBase:mah","PMID:27611693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis I","termid":"FYPO:0003603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal kinetochore disassembly during meiotic prophase I","synonyms":[{"name":"abnormal kinetochore disassembly during prophase I","type":"exact"},{"name":"abnormal kinetochore disassembly during prophase of meiosis I","type":"exact"},{"name":"defective kinetochore disassembly during meiotic prophase I","type":"exact"}],"termid":"FYPO:0006770"}


id: PBO:0084159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High affinity uridine permease, localizes to the plasma membrane; also mediates low but significant transport of the cytotoxic nucleoside analog 5-fluorouridine; not involved in uracil transport; relative distribution to the vacuole increases upon DNA replication stress","termid":"PBO:0084159"}


id: MOD:01948
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and two L-serine residues by a thioether bond and a carbon-carbon bond to form labionin.","definition_xrefs":["PubMed:20082397","RESID:AA0594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-carbon thioether crosslinked residues","termid":"MOD:01993"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"labionin","synonyms":[{"name":"(2S,4S)-2,4-diamino-2-[([(2R)-2-amino-2-carboxyethyl]sulfanyl)methyl]pentanedioic acid","type":"exact"},{"name":"(2S,4S,8R)-2,4,8-triamino-4-carboxy-6-thianonanedioic acid","type":"exact"},{"name":"(2S,4S,8R)-labionin","type":"exact"},{"name":"labionin","type":"exact"}],"termid":"MOD:01948"}


id: PR:P17477
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpp102 gene.","definition_xrefs":["UniProtKB:P17477","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein P1-alpha 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.13c","synonyms":[{"name":"A3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpp102","type":"exact"}],"termid":"PR:P17477"}


id: GO:0005637
data:
  {"annotated_genes":["SJAG_00680","SJAG_03449","SJAG_03657","SJAG_03491","SJAG_01263","SJAG_05226","SJAG_01745","SJAG_05196"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85104,87358,89875,98917,99514,102063,113735,114342],"is_not":false,"summary":null,"term":"GO:0005637"},{"annotations":[113736,102064],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990862"}]},"cv_name":"cellular_component","definition":"The inner, i.e. lumen-facing, lipid bilayer of the nuclear envelope.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle inner membrane","termid":"GO:0019866"},{"relation_name":"is_a","term_name":"nuclear membrane","termid":"GO:0031965"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00680":null,"SJAG_01263":null,"SJAG_01745":null,"SJAG_03449":null,"SJAG_03491":null,"SJAG_03657":null,"SJAG_05196":null,"SJAG_05226":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nuclear inner membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao1612527463"],"synonyms":[{"name":"inner envelope","type":"broad"},{"name":"inner nuclear membrane","type":"exact"},{"name":"nucleus inner membrane","type":"exact"}],"termid":"GO:0005637","terms_by_termid":{"GO:0005637":null,"GO:1990862":null}}


id: PBO:0067677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 862, pseudogene","termid":"PBO:0067677"}


id: GO:0004720
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl-L-lysyl-peptide + H2O + O2 = peptidyl-allysyl-peptide + NH3 + hydrogen peroxide.","definition_xrefs":["EC:1.4.3.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diamine oxidase activity","termid":"GO:0052597"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"protein-lysine 6-oxidase activity","secondary_identifiers":["Reactome:R-HSA-2129375","RHEA:24544","GO:0018056","MetaCyc:PROTEIN-LYSINE-6-OXIDASE-RXN","Reactome:R-HSA-2002466","Reactome:R-HSA-2395340"],"synonyms":[{"name":"lysyl oxidase activity","type":"related"},{"name":"protein-L-lysine:oxygen 6-oxidoreductase (deaminating)","type":"related"}],"termid":"GO:0004720"}


id: GO:1902811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of skeletal muscle fiber differentiation.","definition_xrefs":["GOC:mr","GOC:TermGenie","GO_REF:0000058","PMID:17879321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myotube differentiation","termid":"GO:0010831"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle fiber differentiation","termid":"GO:1902809"},{"relation_name":"is_a","term_name":"positive regulation of skeletal muscle cell differentiation","termid":"GO:2001016"},{"relation_name":"positively_regulates","term_name":"skeletal muscle fiber differentiation","termid":"GO:0098528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of skeletal muscle fiber differentiation","synonyms":[{"name":"activation of skeletal muscle fiber differentiation","type":"narrow"},{"name":"up regulation of skeletal muscle fiber differentiation","type":"exact"},{"name":"up-regulation of skeletal muscle fiber differentiation","type":"exact"},{"name":"upregulation of skeletal muscle fiber differentiation","type":"exact"}],"termid":"GO:1902811"}


id: PBO:0058391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4763","termid":"PBO:0058391"}


id: GO:0043111
data:
  {"annotated_genes":["SJAG_03097","SJAG_04855","SJAG_04671","SJAG_00247","SJAG_03997","SJAG_02724"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98372,102747,104647],"is_not":false,"summary":null,"term":"GO:0043111"},{"annotations":[99333],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902681"},{"annotations":[104648,99334,102748,95441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0011000"},{"annotations":[95442,111183,98373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031582"},{"annotations":[95443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090001"},{"annotations":[98374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071807"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of DNA replication by impeding the progress of the DNA replication fork. Replication fork arrest is one of the 'quality control' processes ensuring that DNA-dependent DNA replication occurs correctly. DNA replication fork arrest during DNA-dependent DNA replication is not known to occur outside of cases where a replication error needs to be prevented or corrected.","definition_xrefs":["GOC:pr","PMID:14645529","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated DNA replication maintenance of fidelity","termid":"GO:0045005"},{"relation_name":"is_a","term_name":"negative regulation of DNA-templated DNA replication","termid":"GO:2000104"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_02724":null,"SJAG_03097":null,"SJAG_03997":null,"SJAG_04671":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"negatively_regulates","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"replication fork arrest","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of DNA replication at replication fork barrier","type":"exact"},{"name":"replication fork blocking","type":"exact"},{"name":"replication fork stalling","type":"exact"}],"termid":"GO:0043111","terms_by_termid":{"GO:0011000":null,"GO:0031582":null,"GO:0043111":null,"GO:0071807":null,"GO:0090001":null,"GO:1902681":null}}


id: PBO:0072531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 61","termid":"PBO:0072531"}


id: SO:0001794
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A point centromere is a relatively small centromere (about 125 bp DNA) in discrete sequence, found in some yeast including S. cerevisiae.","definition_xrefs":["PMID:7502067","SO:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"centromere","termid":"SO:0000577"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"point_centromere","synonyms":[{"name":"point centromere","type":"exact"}],"termid":"SO:0001794"}


id: PBO:0060713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A5 pseudogene 10","termid":"PBO:0060713"}


id: PBO:0041243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 116","termid":"PBO:0041243"}


id: PBO:0073989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 1 pseudogene 3","termid":"PBO:0073989"}


id: PBO:0089893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylglyoxyl reductase (NADPH-dependent)","termid":"PBO:0089893"}


id: PBO:0006466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-dependent diflavin oxidoreductase, involved in iron-sulfur cluster assembly Tah18 (predicted)","termid":"PBO:0006466"}


id: PBO:0030823
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_chlorpromazine","termid":"PBO:0030823"}


id: PBO:0039720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein B mRNA editing enzyme catalytic subunit 3B","termid":"PBO:0039720"}


id: GO:0010222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Vascular tissue pattern formation as it occurs in the stem of vascular plants.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylem and phloem pattern formation","termid":"GO:0010051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stem vascular tissue pattern formation","termid":"GO:0010222"}


id: GO:0014812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a muscle cell from one site to another, often during the development of a multicellular organism.","definition_xrefs":["GOC:mtg_muscle","CL:0000187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle cell migration","termid":"GO:0014812"}


id: PBO:0051600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 23 receptor","termid":"PBO:0051600"}


id: GO:1905535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of eukaryotic translation initiation factor 4F complex assembly.","definition_xrefs":["GOC:TermGenie","GOC:PARL","GOC:bc","GO_REF:0000058","PMID:18426977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"eukaryotic translation initiation factor 4F complex assembly","termid":"GO:0097010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"regulation of eukaryotic translation initiation factor 4F complex assembly","synonyms":[{"name":"regulation of eIF-4F assembly","type":"exact"},{"name":"regulation of eIF4F assembly","type":"exact"}],"termid":"GO:1905535"}


id: PBO:0041700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium homeostasis modulator family member 6","termid":"PBO:0041700"}


id: PBO:0001614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase (predicted)","termid":"PBO:0001614"}


id: GO:0051681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 6-alpha-maltosylglucose, also known as isopanose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide catabolic process","termid":"GO:0009313"},{"relation_name":"is_a","term_name":"6-alpha-maltosylglucose metabolic process","termid":"GO:0051679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"6-alpha-maltosylglucose catabolic process","synonyms":[{"name":"isopanose catabolic process","type":"exact"},{"name":"isopanose catabolism","type":"exact"}],"termid":"GO:0051681"}


id: GO:0019799
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + (alpha-tubulin) L-lysine = CoA + (alpha-tubulin) N6-acetyl-L-lysine.","definition_xrefs":["EC:2.3.1.108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide-lysine-N-acetyltransferase activity","termid":"GO:0061733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0034212","GO:0016746","GO:0140096"],"is_obsolete":false,"name":"tubulin N-acetyltransferase activity","secondary_identifiers":["MetaCyc:TUBULIN-N-ACETYLTRANSFERASE-RXN","RHEA:15277"],"synonyms":[{"name":"TAT activity","type":"related"},{"name":"acetyl-CoA:alpha-tubulin-L-lysine 6-N-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:alpha-tubulin-L-lysine N6-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:alpha-tubulin-lysine N-acetyltransferase activity","type":"related"},{"name":"alpha-tubulin N-acetyltransferase activity","type":"related"},{"name":"alpha-tubulin acetylase activity","type":"related"},{"name":"alpha-tubulin acetyltransferase activity","type":"related"},{"name":"tubulin acetyltransferase activity","type":"related"}],"termid":"GO:0019799"}


id: PBO:0052530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein related peptidase 3","termid":"PBO:0052530"}


id: SO:0000042
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute of a pseudogene (SO:0000336).","definition_xrefs":["SO:ma"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000042 pseudogene_attribute (obsolete SO:0000042)","synonyms":[{"name":"pseudogene attribute","type":"exact"}],"termid":"SO:0000042"}


id: PBO:0079411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 8 class VIII pseudogene 5","termid":"PBO:0079411"}


id: GO:1990643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a granulocyte colony-stimulating factor stimulus.","definition_xrefs":["PMID:9488469"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"},{"relation_name":"is_a","term_name":"response to granulocyte colony-stimulating factor","termid":"GO:1990638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to granulocyte colony-stimulating factor","termid":"GO:1990643"}


id: PR:O94617
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- uap1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine pyrophosphorylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.08","synonyms":[{"name":"Spom972h-uap1","type":"exact"}],"termid":"PR:O94617"}


id: PBO:0000076
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan","termid":"PBO:0000076"}


id: PBO:0070191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 111 pseudogene","termid":"PBO:0070191"}


id: PBO:0047005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A8","termid":"PBO:0047005"}


id: PBO:0059321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L57 pseudogene 6","termid":"PBO:0059321"}


id: PR:Q9P7H2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rex3 gene.","definition_xrefs":["UniProtKB:Q9P7H2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA exonuclease 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1782.08c","synonyms":[{"name":"Spom972h-rex3","type":"exact"}],"termid":"PR:Q9P7H2"}


id: SO:0000626
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Regions of the chromosome that are important for regulating binding of chromosomes to the nuclear matrix.","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_part","termid":"SO:0000830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosomal_regulatory_element","synonyms":[{"name":"chromosomal regulatory element","type":"exact"}],"termid":"SO:0000626"}


id: GO:0098745
data:
  {"annotated_genes":["SJAG_05694","SJAG_05010","SJAG_01746"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87348,87572,106019],"is_not":false,"summary":null,"term":"GO:0098745"}]},"cv_name":"cellular_component","definition":"A protein complex consisting of a Dcp1 regulatory subunit and a Dcp2 catalytic subunit that has mRNA cap binding activity and is involved in decapping of nuclear-transcribed mRNA.","definition_xrefs":["GOC:dos","PMID:22323607","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01746":null,"SJAG_05010":null,"SJAG_05694":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RNA decapping complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Dcp1-Dcp2 complex","type":"exact"}],"termid":"GO:0098745","terms_by_termid":{"GO:0098745":null}}


id: PBO:0062549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily N member 1 pseudogene","termid":"PBO:0062549"}


id: PBO:0080816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-3' exoribonuclease 1","termid":"PBO:0080816"}


id: PR:O14225
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial import receptor subunit TOM20 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12430:SF0","PRO:DNx","OMA:SCHPO00536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import receptor subunit tom20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.07","secondary_identifiers":["UniProtKB:O14225"],"synonyms":[{"name":"Spom972h-TOMM20","type":"exact"},{"name":"mitochondrial 20 kDa outer membrane protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"translocase of outer membrane 20 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14225"}


id: PBO:0048351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 62","termid":"PBO:0048351"}


id: GO:0015121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: phosphoenolpyruvate(out) + phosphate(in) = phosphoenolpyruvate(in) + phosphate(out).","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate:phosphate antiporter activity","termid":"GO:0015315"},{"relation_name":"is_a","term_name":"secondary active monocarboxylate transmembrane transporter activity","termid":"GO:0015355"},{"relation_name":"is_a","term_name":"phosphoenolpyruvate transmembrane transporter activity","termid":"GO:0089721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"phosphoenolpyruvate:phosphate antiporter activity","synonyms":[{"name":"PPT","type":"broad"},{"name":"phosphoenolpyruvate/phosphate translocator","type":"exact"}],"termid":"GO:0015121"}


id: PBO:0057852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3163","termid":"PBO:0057852"}


id: PBO:0048203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit beta1","termid":"PBO:0048203"}


id: GO:0141153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"NADP+ + sn-glycerol 3-phosphate = dihydroxyacetone phosphate + H+ + NADPH.","definition_xrefs":["PMID:15557260","RHEA:11096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase (NADP+) activity","secondary_identifiers":["KEGG_REACTION:R00844"],"synonyms":[{"name":"L-glycerol-3-phosphate:NADP oxidoreductase activity","type":"exact"},{"name":"glycerol phosphate dehydrogenase (nicotinamide adenine dinucleotide phosphate) activity","type":"exact"},{"name":"glycerol-3-phosphate dehydrogenase [NADP+] activity","type":"exact"}],"termid":"GO:0141153"}


id: PBO:0047006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A9","termid":"PBO:0047006"}


id: MOD:00527
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["RESID:AA0151#var","DeltaMass:0","Unimod:159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"Hex3HexNAc2 N4-glycosylated asparagine","synonyms":[{"name":"(Hex)3-HexNAc-HexNAc","type":"exact"},{"name":"Hex(3)HexNAc(2)","type":"related"},{"name":"Hex3HexNAc2","type":"related"}],"termid":"MOD:00527"}


id: GO:0005650
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete importin, alpha-subunit transport factor (obsolete GO:0005650)","synonyms":[{"name":"CAS","type":"related"},{"name":"importin, alpha-subunit transport factor","type":"exact"}],"termid":"GO:0005650"}


id: PBO:0071446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 52","termid":"PBO:0071446"}


id: PR:O14313
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxiredoxin-5, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin pmp20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.06c","secondary_identifiers":["UniProtKB:O14313"],"synonyms":[{"name":"SPCC330.06c","type":"related"},{"name":"Spom972h-PRDX5","type":"exact"},{"name":"peroxisomal membrane protein pmp20 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"thioredoxin reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14313"}


id: GO:2001023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to drug.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to xenobiotic stimulus","termid":"GO:0009410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to drug","synonyms":[{"name":"regulation of drug resistance","type":"related"},{"name":"regulation of drug susceptibility/resistance","type":"related"}],"termid":"GO:2001023"}


id: PBO:0085425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-loop ATPase with similarity to human OLA1 and bacterial YchF; identified as specifically interacting with the proteasome; positively regulates heat shock response; null mutant displays increased translation rate and increased readthrough of premature stop codons; protein abundance increases in response to hydrogen peroxide and to DNA replication stress","termid":"PBO:0085425"}


id: PBO:0030589
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_vacuolar_arginine_level","termid":"PBO:0030589"}


id: PBO:0088795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermediate peptidase Oct1","termid":"PBO:0088795"}


id: PATO:0001451
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An extended swelling in plant organs caused primarily by an excessive accumulation of water.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001451 edematous (sensu botany) (obsolete PATO:0001451)","synonyms":[{"name":"edemic","type":"exact"},{"name":"oedematous","type":"exact"},{"name":"oedemic","type":"exact"}],"termid":"PATO:0001451"}


id: PBO:0002628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose 5-phosphate isomerase (predicted)","termid":"PBO:0002628"}


id: GO:0034031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a ribonucleoside bisphosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with one phosphate group attached to each of two different hydroxyl groups on the sugar.","definition_xrefs":["GOC:mah","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside bisphosphate catabolic process","termid":"GO:0033869"},{"relation_name":"is_a","term_name":"ribonucleoside bisphosphate metabolic process","termid":"GO:0033875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"ribonucleoside bisphosphate catabolic process","synonyms":[{"name":"ribonucleoside bisphosphate breakdown","type":"exact"},{"name":"ribonucleoside bisphosphate catabolism","type":"exact"},{"name":"ribonucleoside bisphosphate degradation","type":"exact"}],"termid":"GO:0034031"}


id: GO:0036203
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10beta-hydroxytaxa-4(20),11-dien-5alpha-yl acetate + O2 + NADPH + H+ = 10beta,14beta-dihydroxytaxa-4(20),11-dien-5alpha-yl acetate + NADP+ + H2O.","definition_xrefs":["EC:1.14.13.146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"taxoid 14-beta-hydroxylase activity","secondary_identifiers":["RHEA:31971","KEGG_REACTION:R09867"],"termid":"GO:0036203"}


id: PBO:0072271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S23","termid":"PBO:0072271"}


id: RO:0002355
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between a process and an anatomical entity such that the process contributes to the act of creating the structural organization of the anatomical entity.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"},{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_structural_organization_of","termid":"RO:0002355"}


id: PBO:0049390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein 3, mitochondrial","termid":"PBO:0049390"}


id: GO:0070341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of fat cells by cell division, resulting in the expansion of their population. A fat cell is an animal connective tissue cell specialized for the synthesis and storage of fat.","definition_xrefs":["GOC:sl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fat cell proliferation","synonyms":[{"name":"adipocyte proliferation","type":"exact"},{"name":"adipose cell proliferation","type":"exact"}],"termid":"GO:0070341"}


id: GO:0071477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypotonic salinity response","termid":"GO:0042539"},{"relation_name":"is_a","term_name":"cellular response to salt stress","termid":"GO:0071472"},{"relation_name":"is_a","term_name":"cellular hypotonic response","termid":"GO:0071476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular hypotonic salinity response","synonyms":[{"name":"cellular response to hypotonic salt stress","type":"exact"}],"termid":"GO:0071477"}


id: PBO:0055454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2886","termid":"PBO:0055454"}


id: PBO:0087910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor IIIA (TFIIIA); essential DNA binding protein required for transcription of 5S rRNA by RNA polymerase III; not involved in transcription of other RNAP III genes; nine conserved zinc fingers; may also bind 5S rRNA","termid":"PBO:0087910"}


id: MOD:01167
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod","definition_xrefs":["Unimod:424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdenum pterin containing modification","termid":"MOD:00744"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molybdopterin guanine dinucleotide","synonyms":[{"name":"MolybdopterinGD","type":"related"},{"name":"molybdenum bis(molybdopterin guanine dinucleotide)","type":"related"}],"termid":"MOD:01167"}


id: GO:0018697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: carbonyl sulfide + 2 H+ + 2 e- = hydrogen sulfide + carbon monoxide.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete carbonyl sulfide nitrogenase activity (obsolete GO:0018697)","synonyms":[{"name":"carbonyl sulphide nitrogenase activity","type":"exact"}],"termid":"GO:0018697"}


id: PBO:0049444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase, very large interferon inducible pseudogene 2","termid":"PBO:0049444"}


id: GO:0051667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a plastid to a specific location in the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid localization","termid":"GO:0051644"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"establishment of organelle localization","termid":"GO:0051656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of plastid localization","synonyms":[{"name":"establishment of plastid localisation","type":"exact"}],"termid":"GO:0051667"}


id: GO:0047577
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybutanoate + NAD+ = H+ + NADH + succinate semialdehyde.","definition_xrefs":["EC:1.1.1.61","RHEA:23948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-hydroxybutyrate dehydrogenase activity","secondary_identifiers":["MetaCyc:4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN","KEGG_REACTION:R01644"],"synonyms":[{"name":"4-hydroxybutanoate:NAD+ oxidoreductase activity","type":"related"},{"name":"gamma-hydroxybutyrate dehydrogenase activity","type":"related"}],"termid":"GO:0047577"}


id: GO:0110112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of lipid transporter activity.","definition_xrefs":["GOC:BHF_miRNA","GOC:BHF","PMID:27365390","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid transport","termid":"GO:0032368"},{"relation_name":"is_a","term_name":"regulation of transporter activity","termid":"GO:0032409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of lipid transporter activity","termid":"GO:0110112"}


id: PBO:0027511
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_following_spore_germination,_single_cell_division,_abolished_mitotic_sister_chromatid_separation","termid":"PBO:0027511"}


id: GO:0061702
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytosolic protein complex that is capable of activating caspase-1.","definition_xrefs":["GOC:dph","PMID:17599095"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005737","GO:0005829","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"canonical inflammasome complex","termid":"GO:0061702"}


id: PBO:0027235
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_acetylation_at_silent_mating-type_cassette","termid":"PBO:0027235"}


id: PBO:0029876
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3_acetylation","termid":"PBO:0029876"}


id: GO:0001147
data:
  {"annotated_genes":["SJAG_04855","SJAG_02242","SJAG_03923"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95971,98381,103930],"is_not":false,"summary":null,"term":"GO:0001147"}]},"cv_name":"molecular_function","definition":"Binding to a sequence of DNA that promotes termination by RNA polymerase. The transcribed region might be described as a gene, cistron, or operon.","definition_xrefs":["PMID:18280161","GOC:txnOH","PMID:18391175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription cis-regulatory region binding","termid":"GO:0000976"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02242":null,"SJAG_03923":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0000976","GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"transcription termination site sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0001148","GO:0001145","GO:0001146","GO:0001160"],"synonyms":[{"name":"bacterial-type RNA polymerase termination site sequence-specific DNA binding","type":"narrow"},{"name":"mitochondrial RNA polymerase termination site sequence-specific DNA binding","type":"narrow"},{"name":"mitochondrial RNA polymerase terminator site sequence-specific DNA binding transcription factor activity","type":"narrow"},{"name":"transcription factor activity, mitochondrial RNA polymerase terminator site sequence-specific binding","type":"narrow"},{"name":"transcription termination site DNA binding","type":"related"}],"termid":"GO:0001147","terms_by_termid":{"GO:0001147":null}}


id: PBO:0065932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rac family small GTPase 1 pseudogene 6","termid":"PBO:0065932"}


id: GO:0032053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a ciliary basal body, a short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium (also called flagellum).","definition_xrefs":["GOC:dph","GOC:krc","GOC:mah","PMID:9889124","GOC:cilia","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule organizing center organization","termid":"GO:0031023"},{"relation_name":"is_a","term_name":"cilium organization","termid":"GO:0044782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"ciliary basal body organization","synonyms":[{"name":"microtubule basal body organisation","type":"broad"},{"name":"microtubule basal body organization","type":"broad"},{"name":"microtubule basal body organization and biogenesis","type":"related"}],"termid":"GO:0032053"}


id: GO:0030738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + tyramine = N-methyltyramine + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:14865","EC:2.1.1.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"tyramine N-methyltransferase activity","secondary_identifiers":["MetaCyc:TYRAMINE-N-METHYLTRANSFERASE-RXN","KEGG_REACTION:R02384"],"synonyms":[{"name":"DIB O-methyltransferase (3,5-diiodo-4-hydroxy-benzoic acid)","type":"related"},{"name":"S-adenosyl-L-methionine:tyramine N-methyltransferase activity","type":"related"},{"name":"S-adenosyl-methionine:tyramine N-methyltransferase activity","type":"related"},{"name":"tyramine methylpherase activity","type":"related"}],"termid":"GO:0030738"}


id: PBO:0054671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2077","termid":"PBO:0054671"}


id: GO:2000693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of seed maturation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of seed maturation","termid":"GO:2000034"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"seed maturation","termid":"GO:0010431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of seed maturation","termid":"GO:2000693"}


id: GO:0019570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-arabinose into other compounds, including 2-oxoglutarate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate metabolic process","termid":"GO:0006103"},{"relation_name":"is_a","term_name":"L-arabinose catabolic process","termid":"GO:0019572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"L-arabinose catabolic process to 2-oxoglutarate","synonyms":[{"name":"L-arabinose breakdown to 2-oxoglutarate","type":"exact"},{"name":"L-arabinose catabolic process to 2-ketoglutarate","type":"exact"},{"name":"L-arabinose catabolic process to alpha-ketoglutarate","type":"exact"},{"name":"L-arabinose catabolic process to alpha-oxoglutarate","type":"exact"},{"name":"L-arabinose catabolism to 2-ketoglutarate","type":"exact"},{"name":"L-arabinose catabolism to alpha-ketoglutarate","type":"exact"},{"name":"L-arabinose catabolism to alpha-oxoglutarate","type":"exact"},{"name":"L-arabinose degradation to 2-oxoglutarate","type":"exact"}],"termid":"GO:0019570"}


id: PBO:0087449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a complex that associates with actin filaments; forms a complex with Aim21p that inhibits barbed end F-actin assembly; elevates actin monomer pools to increase endocytotic efficiency and to regulate the distribution of actin between cables and patches; Aim21p/Tda2p forms a larger complex with actin capping proteins Cap1p and Cap2p; TcTex1-type dynein light chain family member; null mutant is sensitive to expression of the top1-T722A allele","termid":"PBO:0087449"}


id: PBO:0056986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR30D and MIR30B host gene","termid":"PBO:0056986"}


id: PBO:0003985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh2 (predicted)","termid":"PBO:0003985"}


id: PBO:0062119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 46","termid":"PBO:0062119"}


id: GO:0098530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of strand invasion. Strand invasion is the process in which the nucleoprotein complex (composed of the broken single-strand DNA and the recombinase) searches and identifies a region of homology in intact duplex DNA. The broken single-strand DNA displaces the like strand and forms Watson-Crick base pairs with its complement, forming a duplex in which each strand is from one of the two recombining DNA molecules.","definition_xrefs":["GOC:elh","GOC:tb","GOC:dph","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA metabolic process","termid":"GO:0051054"},{"relation_name":"is_a","term_name":"regulation of strand invasion","termid":"GO:0060542"},{"relation_name":"positively_regulates","term_name":"DNA strand invasion","termid":"GO:0042148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"positive regulation of strand invasion","synonyms":[{"name":"positive regulation of D-loop biosynthesis","type":"related"},{"name":"positive regulation of D-loop formation","type":"related"},{"name":"positive regulation of Rad51-mediated strand invasion","type":"exact"}],"termid":"GO:0098530"}


id: PBO:0014246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vps20 associated protein Vta1 (predicted)","termid":"PBO:0014246"}


id: FYPO:0005153
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a greater than normal number of cells in an originally homothallic (h90) population express M-specific information from the mat1 locus.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased number of heterothallic h- cells","synonyms":[{"name":"increased amount of heterothallic H- cells","type":"exact"}],"termid":"FYPO:0005153"}


id: PBO:0111330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Mak16","termid":"PBO:0111330"}


id: GO:0000834
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 5-diphospho-1D-myo-inositol (1,2,3,4,6)pentakisphosphate = ADP + 5,6-bisdiphosphoinositol-1D-myo-inositol (1,2,3,4)tetrakisphosphate.","definition_xrefs":["GOC:elh","PMID:16429326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphoinositol pentakisphosphate kinase activity","termid":"GO:0000829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"5-diphosphoinositol pentakisphosphate 6-kinase activity","synonyms":[{"name":"inositol heptakisphosphate 6-kinase activity","type":"broad"}],"termid":"GO:0000834"}


id: FYPO:0005235
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at stalled replication forks is abolished.","definition_xrefs":["PMID:21945095","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to chromatin at stalled replication fork","synonyms":[{"name":"abolished protein localisation to chromatin at stalled replication fork during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromatin at stalled replication fork during mitotic cell cycle","type":"related"},{"name":"protein localization to chromatin at stalled replication fork during vegetative growth abolished","type":"exact"}],"termid":"FYPO:0005235"}


id: PBO:0055848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich melanocyte differentiation associated","termid":"PBO:0055848"}


id: PBO:0029857
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_spheroid_vegetative_cell","termid":"PBO:0029857"}


id: PBO:0091346
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"K/H ion Antiporter, after S. cerevisiae","termid":"PBO:0091346"}


id: GO:1901312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of gene expression involved in extracellular matrix organization.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of gene expression involved in extracellular matrix organization (obsolete GO:1901312)","synonyms":[{"name":"down regulation of expression of extracellular matrix proteins","type":"exact"},{"name":"down regulation of extracellular matrix protein production","type":"related"},{"name":"down regulation of gene expression involved in extracellular matrix organization","type":"exact"},{"name":"down-regulation of expression of extracellular matrix proteins","type":"exact"},{"name":"down-regulation of extracellular matrix protein production","type":"related"},{"name":"down-regulation of gene expression involved in extracellular matrix organization","type":"exact"},{"name":"downregulation of expression of extracellular matrix proteins","type":"exact"},{"name":"downregulation of extracellular matrix protein production","type":"related"},{"name":"downregulation of gene expression involved in extracellular matrix organization","type":"exact"},{"name":"inhibition of expression of extracellular matrix proteins","type":"exact"},{"name":"inhibition of extracellular matrix protein production","type":"related"},{"name":"inhibition of gene expression involved in extracellular matrix organization","type":"narrow"},{"name":"negative regulation of expression of extracellular matrix proteins","type":"exact"},{"name":"negative regulation of extracellular matrix protein production","type":"related"}],"termid":"GO:1901312"}


id: GO:0017195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The acetylation of the N-terminal lysine of proteins to form the derivative N2-acetyl-L-lysine. The occurrence of this modification has not been confirmed.","definition_xrefs":["RESID:AA0048"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-lysine N2-acetylation (obsolete GO:0017195)","termid":"GO:0017195"}


id: FYPO:0002039
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of deadenylation-independent decapping of nuclear-transcribed mRNA is decreased. All RNA decapping may be decreased, or one or more specific RNA molecules may be selectively affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal deadenylation-independent decapping of nuclear-transcribed mRNA","termid":"FYPO:0002038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000294","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased deadenylation-independent decapping of nuclear-transcribed mRNA","synonyms":[{"name":"decreased deadenylation-independent decapping of nuclear-transcribed mRNA during mitotic cell cycle","type":"related"},{"name":"decreased deadenylation-independent decapping of nuclear-transcribed mRNA during vegetative growth","type":"exact"},{"name":"reduced deadenylation-independent decapping of nuclear-transcribed mRNA","type":"exact"}],"termid":"FYPO:0002039"}


id: PBO:0076271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYBU antisense RNA 1","termid":"PBO:0076271"}


id: SO:0000519
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one DJ-gene and one J-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_DJ_J_cluster","synonyms":[{"name":"V DJ J cluster","type":"exact"},{"name":"V-(DJ)-J-CLUSTER","type":"related"}],"termid":"SO:0000519"}


id: GO:0010681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of cinnamic acid, 3-phenyl-2-propenoic acid, which is then utilized in the metabolism of stilbene.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete cinnamic acid biosynthetic process involved in stilbene metabolism (obsolete GO:0010681)","termid":"GO:0010681"}


id: PBO:0085429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polyamine acetyltransferase; acetylates polyamines (e.g. putrescine, spermidine, spermine) and also aralkylamines (e.g. tryptamine, phenylethylamine); may be involved in transcription and/or DNA replication","termid":"PBO:0085429"}


id: PBO:0062759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily N member 4","termid":"PBO:0062759"}


id: PBO:0041053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 7 pseudogene 4","termid":"PBO:0041053"}


id: _global:disconnected_from
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X is disconnected_from Y iff it is not the case that X overlaps Y.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disconnected_from","termid":"_global:disconnected_from"}


id: PBO:0027542
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-monopolar_intracellular_mitochondrion_distribution","termid":"PBO:0027542"}


id: PBO:0000047
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"evidence","termid":"PBO:0000047"}


id: GO:0043310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of eosinophil degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myeloid leukocyte mediated immunity","termid":"GO:0002887"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte degranulation","termid":"GO:0043301"},{"relation_name":"is_a","term_name":"regulation of eosinophil degranulation","termid":"GO:0043309"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"eosinophil degranulation","termid":"GO:0043308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"negative regulation of eosinophil degranulation","synonyms":[{"name":"down regulation of eosinophil degranulation","type":"exact"},{"name":"down-regulation of eosinophil degranulation","type":"exact"},{"name":"downregulation of eosinophil degranulation","type":"exact"},{"name":"inhibition of eosinophil degranulation","type":"narrow"},{"name":"negative regulation of eosinophil granule exocytosis","type":"exact"}],"termid":"GO:0043310"}


id: PBO:0060252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYCL pseudogene 2","termid":"PBO:0060252"}


id: PBO:0068308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 11 pseudogene 1","termid":"PBO:0068308"}


id: GO:0006520
data:
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id: GO:0071667
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a RNA/DNA hybrid.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid binding","termid":"GO:0003676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"DNA/RNA hybrid binding","synonyms":[{"name":"RNA/DNA hybrid binding","type":"exact"}],"termid":"GO:0071667"}


id: FYPO:0002006
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of iron ions measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular iron level","synonyms":[{"name":"increased cellular iron ion level","type":"exact"},{"name":"increased cellular iron level during mitotic cell cycle","type":"related"},{"name":"increased cellular iron level during vegetative growth","type":"exact"},{"name":"increased iron accumulation","type":"related"}],"termid":"FYPO:0002006"}


id: PBO:0054531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1931","termid":"PBO:0054531"}


id: GO:0034868
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4,4-trimethyl-3-hydroxypentanoyl-CoA = 2,4,4-trimethyl-3-oxopentanoyl-CoA + 2 H+ + 2 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4,4-trimethyl-3-hydroxypentanoyl-CoA dehydrogenase activity (obsolete GO:0034868)","termid":"GO:0034868"}


id: GO:0018463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-hydroxyhexanoate + NAD+ = 6-oxohexanoate + H+ + NADH.","definition_xrefs":["EC:1.1.1.258","RHEA:14225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"6-hydroxyhexanoate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R05283","MetaCyc:6-HYDROXYHEXANOATE-OXIDATION-RXN","UM-BBD_reactionID:r0174"],"synonyms":[{"name":"6-hydroxyhexanoate:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0018463"}


id: PBO:0025505
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholesteryl ester storage disease","termid":"PBO:0025505"}


