# terms

id: GO:0097288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the Q nucleoside precursor 7-cyano-7-deazaguanine, also known as 2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidine-5-carbonitrile or preQo.","definition_xrefs":["PMID:364423","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrile biosynthetic process","termid":"GO:0080028"},{"relation_name":"is_a","term_name":"7-cyano-7-deazaguanine metabolic process","termid":"GO:0097287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"7-cyano-7-deazaguanine biosynthetic process","synonyms":[{"name":"7-cyano-7-deazaguanine anabolism","type":"exact"},{"name":"7-cyano-7-deazaguanine biosynthesis","type":"exact"},{"name":"7-cyano-7-deazaguanine formation","type":"exact"},{"name":"7-cyano-7-deazaguanine synthesis","type":"exact"}],"termid":"GO:0097288"}


id: GO:0062078
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a TSC1-TSC2 complex.","definition_xrefs":["PMID:28561066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"TSC1-TSC2 complex binding","synonyms":[{"name":"tuberin sclerosis complex binding","type":"exact"},{"name":"tuberin-hamartin complex binding","type":"exact"}],"termid":"GO:0062078"}


id: GO:0006906
data:
  {"annotated_genes":["SJAG_02587","SJAG_00430","SJAG_04513","SJAG_04978","SJAG_00204","SJAG_01379","SJAG_03403","SJAG_03347","SJAG_03670","SJAG_00557","SJAG_04739","SJAG_01324","SJAG_03889","SJAG_03848","SJAG_03552","SJAG_05184","SJAG_00380","SJAG_01633","SJAG_00826","SJAG_00171","SJAG_03536","SJAG_04023","SJAG_01697","SJAG_02241","SJAG_02315"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86606,94171,95984,96297,96934,97166,103518,104817,105793,108836,113687,113732,114712],"is_not":false,"summary":null,"term":"GO:0006906"},{"annotations":[113075,86207,97201,95591,90359,95795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034058"},{"annotations":[92001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048210"},{"annotations":[101830],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0035493"},{"annotations":[105946,113805,91607,104160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048280"}]},"cv_name":"biological_process","definition":"Fusion of the membrane of a transport vesicle with its target membrane.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"is_a","term_name":"organelle membrane fusion","termid":"GO:0090174"},{"relation_name":"part_of","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00171":null,"SJAG_00204":null,"SJAG_00380":null,"SJAG_00430":null,"SJAG_00557":null,"SJAG_00826":null,"SJAG_01324":null,"SJAG_01379":null,"SJAG_01633":null,"SJAG_01697":null,"SJAG_02241":null,"SJAG_02315":null,"SJAG_02587":null,"SJAG_03347":null,"SJAG_03403":null,"SJAG_03536":null,"SJAG_03552":null,"SJAG_03670":null,"SJAG_03848":null,"SJAG_03889":null,"SJAG_04023":null,"SJAG_04513":null,"SJAG_04739":null,"SJAG_04978":null,"SJAG_05184":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"vesicle fusion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006906","terms_by_termid":{"GO:0006906":null,"GO:0034058":null,"GO:0035493":null,"GO:0048210":null,"GO:0048280":null}}


id: PBO:0081150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP90 zinc finger protein","termid":"PBO:0081150"}


id: FYPO:0004319
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a cyclin-dependent protein kinase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein kinase activity","termid":"FYPO:0002700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"increased cyclin-dependent protein kinase activity","termid":"FYPO:0004319"}


id: PATO:0002320
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A superelptic shape inhering in a bearer by virtue of the bearer's shape resembling a diamond.","definition_xrefs":["PATO:WC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"superelliptic","termid":"PATO:0002318"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diamond shaped","termid":"PATO:0002320"}


id: GO:0048835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the number of petals produced in a developing flower.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of petal number","termid":"GO:0048834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of decreased petal number","termid":"GO:0048835"}


id: FYPO:0003317
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to a growing cell tip is decreased, and the protein is also detected distributed throughout the plasma membrane and/or cell cortex.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to growing cell tip","termid":"FYPO:0002871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to growing cell tip, with protein distributed in plasma membrane or cortex","synonyms":[{"name":"decreased protein localisation to growing cell tip, with protein distributed in plasma membrane or cortex","type":"exact"},{"name":"decreased protein localization to growing cell end, with protein distributed in plasma membrane or cortex","type":"exact"},{"name":"decreased protein localization to growing cell tip, with protein distributed in cell cortex","type":"narrow"},{"name":"decreased protein localization to growing cell tip, with protein distributed in cell membrane or cortex","type":"exact"},{"name":"decreased protein localization to growing cell tip, with protein distributed in plasma membrane","type":"narrow"},{"name":"decreased protein localization to growing cell tip, with protein distributed in plasma membrane or cortex during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to growing cell tip, with protein distributed in plasma membrane or cortex, during vegetative growth","type":"exact"},{"name":"reduced protein localization to growing cell tip, with protein distributed in plasma membrane or cortex","type":"exact"}],"termid":"FYPO:0003317"}


id: GO:0010228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in transforming a meristem that produces vegetative structures, such as leaves, into a meristem that produces reproductive structures, such as a flower or an inflorescence.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"post-embryonic development","termid":"GO:0009791"},{"relation_name":"part_of","term_name":"reproductive structure development","termid":"GO:0048608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vegetative to reproductive phase transition of meristem","synonyms":[{"name":"floral evocation","type":"related"},{"name":"flowering","type":"related"},{"name":"transition from vegetative to reproductive phase","type":"exact"}],"termid":"GO:0010228"}


id: PBO:0001086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L19 (predicted)","termid":"PBO:0001086"}


id: PBO:0065584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha","termid":"PBO:0065584"}


id: GO:0033997
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [(2->1)-beta-D-fructosyl](n) = [(2->1)-beta-D-fructosyl](n-1) + alpha-D-fructofuranose-beta-D-fructofuranose 1,2':1,2'-dianhydride. This reaction is the production of alpha-D-fructofuranose beta-D-fructofuranose 1,2':2,1'-dianhydride (DFA I) by successively eliminating the diminishing (2->1)-beta-D-fructan (inulin) chain from the terminal D-fructosyl-D-fructosyl disaccharide.","definition_xrefs":["EC:4.2.2.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"inulin fructotransferase (DFA-I-forming) activity","secondary_identifiers":["MetaCyc:4.2.2.17-RXN"],"synonyms":[{"name":"2,1-beta-D-fructan lyase (alpha-D-fructofuranose-beta-D-fructofuranose-1,2':2,1'-dianhydride-forming) activity","type":"related"},{"name":"inulin D-fructosyl-D-fructosyltransferase (1,2':1',2-dianhydride-forming) activity","type":"related"},{"name":"inulin D-fructosyl-D-fructosyltransferase (forming alpha-D-fructofuranose beta-D-fructofuranose 1,2':1',2-dianhydride) activity","type":"related"},{"name":"inulin fructotransferase (DFA-I-producing) activity","type":"related"},{"name":"inulin fructotransferase (depolymerizing, difructofuranose-1,2':2',1-dianhydride-forming) activity","type":"related"}],"termid":"GO:0033997"}


id: PBO:0076806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tektin 4 pseudogene 3","termid":"PBO:0076806"}


id: PBO:0078725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Met (anticodon CAT) 1-1","termid":"PBO:0078725"}


id: PBO:0081733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 664","termid":"PBO:0081733"}


id: PBO:0040573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,4-galactosyltransferase 7","termid":"PBO:0040573"}


id: GO:0045795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases cell volume.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell volume homeostasis","termid":"GO:0006884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell volume","termid":"GO:0045795"}


id: MOD:00891
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to D-serine.","definition_xrefs":["RESID:AA0195","PubMed:7973665","PubMed:6893271","ChEBI:29998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-serine","synonyms":[{"name":"(R)-2-amino-3-hydroxypropanoic acid","type":"exact"},{"name":"D-Ser","type":"exact"},{"name":"D-serine","type":"exact"}],"termid":"MOD:00891"}


id: GO:1903881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of interleukin-17-mediated signaling pathway.","definition_xrefs":["GOC:krc","PMID:20054338","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"regulates","term_name":"interleukin-17-mediated signaling pathway","termid":"GO:0097400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of interleukin-17-mediated signaling pathway","synonyms":[{"name":"regulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"regulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"regulation of interleukin-17-mediated signalling pathway","type":"exact"}],"termid":"GO:1903881"}


id: PBO:0041713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin like 4","termid":"PBO:0041713"}


id: PBO:0051251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-11-1 (pseudogene)","termid":"PBO:0051251"}


id: GO:0047641
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucitol 6-phosphate + NADP+ = D-glucose 6-phosphate + H+ + NADPH.","definition_xrefs":["EC:1.1.1.200","RHEA:20037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"aldose-6-phosphate reductase (NADPH) activity","secondary_identifiers":["MetaCyc:ALDOSE-6-PHOSPHATE-REDUCTASE-NADPH-RXN","KEGG_REACTION:R00834"],"synonyms":[{"name":"A6PR","type":"related"},{"name":"D-aldose-6-phosphate:NADP+ 1-oxidoreductase activity","type":"related"},{"name":"NADP-dependent D-sorbitol-6-phosphate dehydrogenase activity","type":"related"},{"name":"NADP-dependent aldose 6-phosphate reductase activity","type":"related"},{"name":"alditol 6-phosphate:NADP 1-oxidoreductase activity","type":"related"},{"name":"aldose 6-phosphate reductase activity","type":"related"},{"name":"aldose-6-P reductase activity","type":"related"},{"name":"aldose-6-phosphate reductase activity","type":"related"}],"termid":"GO:0047641"}


id: FYPO:0008288
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a ceramide measured in a cell higher than normal.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular ceramide level","termid":"FYPO:0008288"}


id: GO:0052649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving coenzyme gamma-F420-2 (F420-2; coenzyme F420; N-{N-[O-(7,8-didemethyl-8-hydroxy-5-deazariboflavin phospho)-(S)-lactyl]-gamma-L-glutamyl}-L-glutamate), the amide obtained by formal condensation of the carboxylic acid group of F420-0 with the amino group of L-gamma-glutamyl-L-glutamic acid.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribitol phosphate metabolic process","termid":"GO:0052648"},{"relation_name":"is_a","term_name":"tricarboxylic acid metabolic process","termid":"GO:0072350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"coenzyme gamma-F420-2 metabolic process","synonyms":[{"name":"F420-2 metabolic process","type":"exact"},{"name":"F420-2 metabolism","type":"exact"},{"name":"coenzyme F420 metabolic process","type":"exact"},{"name":"coenzyme F420 metabolism","type":"exact"},{"name":"coenzyme gamma-F420-2 metabolism","type":"exact"}],"termid":"GO:0052649"}


id: PBO:0036022
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_homocitrate_synthase_activity","termid":"PBO:0036022"}


id: GO:0010539
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Stops, prevents or reduces the activity of the Hsp27 molecular chaperone.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete Hsp27 protein inhibitor activity (obsolete GO:0010539)","synonyms":[{"name":"Hsp27 protein inhibitor activity","type":"exact"}],"termid":"GO:0010539"}


id: SO:0000619
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variably distant linear promoter region recognized by TFIIIC, with consensus sequence TGGCnnAGTGG.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A_box","secondary_identifiers":["http://en.wikipedia.org/wiki/A-box"],"synonyms":[{"name":"A-box","type":"exact"}],"termid":"SO:0000619"}


id: PBO:0086392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative component of the protein phosphatase type 2A complex","termid":"PBO:0086392"}


id: GO:1904162
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any 5'-3' exodeoxyribonuclease activity that is involved in UV-damage excision repair.","definition_xrefs":["GOC:TermGenie","PMID:10704216","GO_REF:0000061"],"gene_count":0,"genotype_count":0,"name":"obsolete 5'-3' exodeoxyribonuclease activity involved in UV-damage excision repair (obsolete GO:1904162)","synonyms":[{"name":"5'-3' exodeoxyribonuclease activity involved in AER","type":"related"},{"name":"5'-3' exodeoxyribonuclease activity involved in UV-damaged DNA endonuclease-dependent excision repair","type":"exact"},{"name":"5'-3' exodeoxyribonuclease activity involved in UVDE-dependent excision repair","type":"exact"},{"name":"5'-3' exodeoxyribonuclease activity involved in UVER","type":"exact"},{"name":"5'-3' exodeoxyribonuclease activity involved in alternative excision repair","type":"related"}],"termid":"GO:1904162"}


id: FYPO:0002811
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a non-ionic osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to osmotic stress","termid":"FYPO:0000270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to non-ionic osmotic stress","synonyms":[{"name":"decreased growth during cellular response to non-ionic osmotic stress","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to non-ionic osmotic stress","type":"exact"},{"name":"hypersensitive to non-ionic osmotic stress","type":"exact"},{"name":"sensitive to non-ionic osmotic stress during mitotic cell cycle","type":"related"},{"name":"sensitive to non-ionic osmotic stress during vegetative growth","type":"exact"}],"termid":"FYPO:0002811"}


id: PBO:0068246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 28S ribosomal 3","termid":"PBO:0068246"}


id: PBO:0044775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 56","termid":"PBO:0044775"}


id: PBO:0003381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortical anchoring factor for dynein Mcp5/Num1","termid":"PBO:0003381"}


id: PBO:0063518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDXDC2P-NPIPB14P readthrough, transcribed pseudogene","termid":"PBO:0063518"}


id: PBO:0042151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 13","termid":"PBO:0042151"}


id: PBO:0078668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon TTT) 3-3","termid":"PBO:0078668"}


id: FYPO:0002468
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are inviable, have a larger volume and are longer than normal in the vegetative growth phase of the life cycle. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable swollen elongated vegetative cell population (obsolete FYPO:0002468)","synonyms":[{"name":"inviable elongated cell population with increased cell volume","type":"exact"},{"name":"inviable elongated swollen population","type":"exact"},{"name":"inviable enlarged elongated cell population","type":"related"},{"name":"inviable large elongated cell population","type":"related"},{"name":"inviable swollen long vegetative cell population","type":"exact"}],"termid":"FYPO:0002468"}


id: SO:0001342
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Isowyosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isowyosine","secondary_identifiers":["RNAMOD:101"],"synonyms":[{"name":"imG2","type":"exact"}],"termid":"SO:0001342"}


id: PBO:0090377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic fizzy-related APC coactivator Fzr2","termid":"PBO:0090377"}


id: GO:0071059
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha6-beta1 integrin complex bound to the tetraspanin CD151.","definition_xrefs":["PMID:11884516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"alpha6-beta1 integrin-CD151 complex","synonyms":[{"name":"ITGA6-ITGB1-CD151 complex","type":"narrow"}],"termid":"GO:0071059"}


id: GO:1902518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cyclophosphamide stimulus.","definition_xrefs":["GOC:TermGenie","GOC:dw","PMID:23648065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cyclophosphamide","termid":"GO:1902518"}


id: GO:0048545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a steroid hormone stimulus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to steroid hormone","synonyms":[{"name":"response to steroid hormone stimulus","type":"exact"}],"termid":"GO:0048545"}


id: PBO:0004037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein (predicted)","termid":"PBO:0004037"}


id: PBO:0066431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RERG intronic transcript 1","termid":"PBO:0066431"}


id: PBO:0077290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 31","termid":"PBO:0077290"}


id: GO:0050318
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: digallate + H2O = 2 gallate + H+.","definition_xrefs":["RHEA:16365","EC:3.1.1.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"tannase activity","secondary_identifiers":["MetaCyc:TANNASE-RXN","KEGG_REACTION:R00053"],"synonyms":[{"name":"tannase S","type":"related"},{"name":"tannin acetylhydrolase activity","type":"related"},{"name":"tannin acylhydrolase activity","type":"related"}],"termid":"GO:0050318"}


id: PBO:0090034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein, Hsp70 family, ribosome associated Sks2","termid":"PBO:0090034"}


id: PATO:0001266
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of blue hue and low saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blue","termid":"PATO:0000318"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desaturated blue","synonyms":[{"name":"pale blue","type":"exact"}],"termid":"PATO:0001266"}


id: GO:0120021
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Removes oxysterol from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle.","definition_xrefs":["PMID:25797198","PMID:20823909","GOC:krc","PMID:24220498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol transfer activity","termid":"GO:0120015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0120013"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0120013","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"oxysterol transfer activity","synonyms":[{"name":"intermembrane oxysterol transfer activity","type":"narrow"},{"name":"oxysterol carrier activity","type":"exact"}],"termid":"GO:0120021"}


id: PBO:0003547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex non-SMC subunit Nse5","termid":"PBO:0003547"}


id: PR:Q69Z14
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vma9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q69Z14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase subunit e (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.16","synonyms":[{"name":"Spom972h-vma9","type":"exact"},{"name":"V-ATPase subunit e (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump subunit e (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q69Z14"}


id: GO:0043573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation of two or more leucoplasts by division of one leucoplast. A leucoplast is a colorless plastid involved in the synthesis of monoterpenes.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid fission","termid":"GO:0043572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leucoplast fission","termid":"GO:0043573"}


id: GO:1903126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of centriole-centriole cohesion.","definition_xrefs":["GOC:als","GOC:TermGenie","GO_REF:0000058","PMID:24554434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of centriole-centriole cohesion","termid":"GO:0030997"},{"relation_name":"negatively_regulates","term_name":"centriole-centriole cohesion","termid":"GO:0010457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0000226","GO:0007049","GO:0007010"],"is_obsolete":false,"name":"negative regulation of centriole-centriole cohesion","synonyms":[{"name":"down regulation of centriole-centriole cohesion","type":"exact"},{"name":"down-regulation of centriole-centriole cohesion","type":"exact"},{"name":"downregulation of centriole-centriole cohesion","type":"exact"},{"name":"inhibition of centriole-centriole cohesion","type":"narrow"}],"termid":"GO:1903126"}


id: PBO:0029736
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphatase_activity","termid":"PBO:0029736"}


id: PBO:0085155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleosome remodeling protein; functions in various aspects of transcription, chromatin maintenance, and RNA processing; required for fidelity of promoter selection through maintenance of chromatin structure during transcription in order to inhibit transcription from promoters within coding regions; required for H3K36 trimethylation but not dimethylation by Set2p","termid":"PBO:0085155"}


id: PBO:0036269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ino80 complex actin-like protein Arp8","termid":"PBO:0036269"}


id: SO:0000085
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000085 gene_by_genome_location (obsolete SO:0000085)","termid":"SO:0000085"}


id: GO:0046900
data:
  {"annotated_genes":["SJAG_03224","SJAG_00529"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88968,100866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046901"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving tetrahydrofolylpolyglutamate, a folate derivative comprising tetrahydrofolate attached to a chain of glutamate residues.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid-containing compound metabolic process","termid":"GO:0006760"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00529":null,"SJAG_03224":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tetrahydrofolylpolyglutamate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tetrahydrofolyl-[Glu](n) metabolic process","type":"exact"},{"name":"tetrahydrofolyl-[Glu](n) metabolism","type":"exact"},{"name":"tetrahydrofolylpolyglutamate metabolism","type":"exact"}],"termid":"GO:0046900","terms_by_termid":{"GO:0046901":null}}


id: PBO:0069703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 983, pseudogene","termid":"PBO:0069703"}


id: PBO:0072595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radical S-adenosyl methionine domain containing 2","termid":"PBO:0072595"}


id: PBO:0048248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 12I","termid":"PBO:0048248"}


id: PBO:0032715
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_error-free_translesion_synthesis_of_cyclobutane_pyrimidine_dimers","termid":"PBO:0032715"}


id: FYPO:0006344
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found at the plasma membrane is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"protein mislocalized to plasma membrane during vegetative growth","synonyms":[{"name":"ectopic protein localization to plasma membrane during vegetative growth","type":"exact"},{"name":"protein mislocalised to plasma membrane during vegetative growth","type":"exact"},{"name":"protein mislocalized to plasma membrane during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006344"}


id: PBO:0045221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC9 and MRPS16 antisense RNA 1","termid":"PBO:0045221"}


id: GO:0052322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of phytoalexin biosynthesis, the chemical reactions and pathways resulting in the formation of phytoalexins.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"regulation of phytoalexin biosynthetic process","termid":"GO:0052319"},{"relation_name":"is_a","term_name":"positive regulation of phytoalexin metabolic process","termid":"GO:0052320"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"positively_regulates","term_name":"phytoalexin biosynthetic process","termid":"GO:0052315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of phytoalexin biosynthetic process","synonyms":[{"name":"activation of phytoalexin biosynthesis","type":"narrow"},{"name":"positive regulation of phytoalexin biosynthesis","type":"exact"},{"name":"stimulation of phytoalexin biosynthesis","type":"narrow"},{"name":"up regulation of phytoalexin biosynthesis","type":"exact"},{"name":"up-regulation of phytoalexin biosynthesis","type":"exact"},{"name":"upregulation of phytoalexin biosynthesis","type":"exact"}],"termid":"GO:0052322"}


id: GO:0045711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of salivary gland determination in an adult organism.","definition_xrefs":["GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of salivary gland boundary specification","termid":"GO:0045706"},{"relation_name":"is_a","term_name":"regulation of adult salivary gland boundary specification","termid":"GO:0045707"},{"relation_name":"positively_regulates","term_name":"adult salivary gland boundary specification","termid":"GO:0007434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of adult salivary gland boundary specification","synonyms":[{"name":"activation of adult salivary gland determination","type":"narrow"},{"name":"positive regulation of adult salivary gland determination","type":"exact"},{"name":"stimulation of adult salivary gland determination","type":"narrow"},{"name":"up regulation of adult salivary gland determination","type":"exact"},{"name":"up-regulation of adult salivary gland determination","type":"exact"},{"name":"upregulation of adult salivary gland determination","type":"exact"}],"termid":"GO:0045711"}


id: GO:0071518
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4,5-dihydroxy-pentane-2,3-dione + ATP = 5-phospho-4-hydroxy-pentane-2,3-dione (P-DPD) + ADP.","definition_xrefs":["GOC:imk","PMID:17274596","PMID:20025244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"autoinducer-2 kinase activity","secondary_identifiers":["MetaCyc:RXN0-5461","RHEA:15377"],"synonyms":[{"name":"4,5-dihydroxy-pentane-2,3-dione kinase activity","type":"exact"}],"termid":"GO:0071518"}


id: PBO:0043431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cornichon family AMPA receptor auxiliary protein 3","termid":"PBO:0043431"}


id: GO:0061698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a glutaryl group (CO-CH2-CH2-CH2-CO) from a residue in a peptide or protein.","definition_xrefs":["PMID:24703693","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deacylation","termid":"GO:0035601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein deglutarylation","termid":"GO:0061698"}


id: PBO:0040221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATCAY kinesin light chain interacting caytaxin","termid":"PBO:0040221"}


id: PBO:0088391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TREX/TREX2 complex subunit Pci2","termid":"PBO:0088391"}


id: PR:P36617
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair endonuclease XPF that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10150:SF0","OMA:SCHPO04346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rad16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.01","secondary_identifiers":["UniProtKB:P36617"],"synonyms":[{"name":"Spom972h-ERCC4","type":"exact"}],"termid":"PR:P36617"}


id: PBO:0050930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced transmembrane protein 9 pseudogene","termid":"PBO:0050930"}


id: PBO:0064704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 40","termid":"PBO:0064704"}


id: PBO:0085390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane low glucose sensor, regulates glucose transport; high affinity sensor that contains 12 predicted transmembrane segments and a long C-terminal tail required for induction of hexose transporters; also senses fructose and mannose; SNF3 has a paralog, RGT2, that arose from the whole genome duplication","termid":"PBO:0085390"}


id: PBO:0081681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 602, pseudogene","termid":"PBO:0081681"}


id: PBO:0017033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein, predicted GPI anchored","termid":"PBO:0017033"}


id: PBO:0082581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chorismate mutase; catalyzes the conversion of chorismate to prephenate to initiate the tyrosine/phenylalanine-specific branch of aromatic amino acid biosynthesis","termid":"PBO:0082581"}


id: PBO:0058016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3942","termid":"PBO:0058016"}


id: PBO:0089006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase complex accessory subunit Erf4","termid":"PBO:0089006"}


id: PBO:0055396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2826","termid":"PBO:0055396"}


id: GO:0031922
data:
  {"annotated_genes":["SJAG_03808","SJAG_02962","SJAG_02152","SJAG_03652"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86169,113649,86170,114926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903091"}]},"cv_name":"biological_process","definition":"The directed movement of pyridoxamine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Pyridoxamine, 4-(aminomethyl)-5-(hydroxymethyl)-2-methylpyridin-3-ol, is one of the vitamin B6 compounds. Pyridoxal, pyridoxamine and pyridoxine are collectively known as vitamin B6, and are efficiently converted to the biologically active form of vitamin B6, pyridoxal phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"vitamin B6 transport","termid":"GO:0031919"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02152":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_03808":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"pyridoxamine transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031922","terms_by_termid":{"GO:1903091":null}}


id: PBO:0030352
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_nuclear_export_during_cellular_hypotonic_salinity_response","termid":"PBO:0030352"}


id: GO:1900077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to insulin stimulus.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of cellular response to insulin stimulus","termid":"GO:1900076"},{"relation_name":"negatively_regulates","term_name":"cellular response to insulin stimulus","termid":"GO:0032869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to insulin stimulus","synonyms":[{"name":"down regulation of cellular response to insulin stimulus","type":"exact"},{"name":"down-regulation of cellular response to insulin stimulus","type":"exact"},{"name":"downregulation of cellular response to insulin stimulus","type":"exact"},{"name":"inhibition of cellular response to insulin stimulus","type":"narrow"}],"termid":"GO:1900077"}


id: PBO:0005333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triosephosphate isomerase","termid":"PBO:0005333"}


id: PBO:0073294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 16","termid":"PBO:0073294"}


id: GO:1900127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hyaluronan biosynthetic process.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule biosynthetic process","termid":"GO:0010557"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of hyaluronan biosynthetic process","termid":"GO:1900125"},{"relation_name":"positively_regulates","term_name":"hyaluronan biosynthetic process","termid":"GO:0030213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of hyaluronan biosynthetic process","synonyms":[{"name":"activation of hyaluronan anabolism","type":"exact"},{"name":"activation of hyaluronan biosynthesis","type":"exact"},{"name":"activation of hyaluronan biosynthetic process","type":"narrow"},{"name":"activation of hyaluronan formation","type":"exact"},{"name":"activation of hyaluronan synthesis","type":"exact"},{"name":"positive regulation of hyaluronan anabolism","type":"exact"},{"name":"positive regulation of hyaluronan biosynthesis","type":"exact"},{"name":"positive regulation of hyaluronan formation","type":"exact"},{"name":"positive regulation of hyaluronan synthesis","type":"exact"},{"name":"up regulation of hyaluronan anabolism","type":"exact"},{"name":"up regulation of hyaluronan biosynthesis","type":"exact"},{"name":"up regulation of hyaluronan biosynthetic process","type":"exact"},{"name":"up regulation of hyaluronan formation","type":"exact"},{"name":"up regulation of hyaluronan synthesis","type":"exact"},{"name":"up-regulation of hyaluronan anabolism","type":"exact"},{"name":"up-regulation of hyaluronan biosynthesis","type":"exact"},{"name":"up-regulation of hyaluronan biosynthetic process","type":"exact"},{"name":"up-regulation of hyaluronan formation","type":"exact"},{"name":"up-regulation of hyaluronan synthesis","type":"exact"},{"name":"upregulation of hyaluronan anabolism","type":"exact"},{"name":"upregulation of hyaluronan biosynthesis","type":"exact"},{"name":"upregulation of hyaluronan biosynthetic process","type":"exact"},{"name":"upregulation of hyaluronan formation","type":"exact"},{"name":"upregulation of hyaluronan synthesis","type":"exact"}],"termid":"GO:1900127"}


id: GO:0005187
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete storage protein (obsolete GO:0005187)","synonyms":[{"name":"storage protein","type":"exact"}],"termid":"GO:0005187"}


id: PBO:0088312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi galactosylxylosylprotein 3-beta-galactosyltransferase Pvg3","termid":"PBO:0088312"}


id: GO:2000748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of defecation rhythm.","definition_xrefs":["GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of defecation","termid":"GO:2000294"},{"relation_name":"is_a","term_name":"regulation of defecation rhythm","termid":"GO:2000746"},{"relation_name":"positively_regulates","term_name":"defecation rhythm","termid":"GO:0035882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of defecation rhythm","synonyms":[{"name":"positive regulation of DMP","type":"exact"},{"name":"positive regulation of defecation behavior","type":"related"},{"name":"positive regulation of defecation cycle","type":"exact"},{"name":"positive regulation of defecation motor program","type":"exact"}],"termid":"GO:2000748"}


id: PBO:0029748
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_sequestered_calcium_level","termid":"PBO:0029748"}


id: GO:0042357
data:
  {"annotated_genes":["SJAG_00381","SJAG_02420","SJAG_02421","SJAG_04866","SJAG_03362","SJAG_04282"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110170,90333,109754,112190,109748,95604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009229"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving thiamine diphosphate, a derivative of thiamine (vitamin B1) which acts as a coenzyme in a range of processes including the Krebs cycle.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"thiamine-containing compound metabolic process","termid":"GO:0042723"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00381":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_03362":null,"SJAG_04282":null,"SJAG_04866":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0006790","GO:0006766","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"thiamine diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"TPP metabolic process","type":"exact"},{"name":"TPP metabolism","type":"exact"},{"name":"thiamin diphosphate metabolic process","type":"exact"},{"name":"thiamin diphosphate metabolism","type":"exact"},{"name":"thiamin pyrophosphate metabolic process","type":"exact"},{"name":"thiamin pyrophosphate metabolism","type":"exact"},{"name":"thiamine diphosphate metabolism","type":"exact"},{"name":"thiamine pyrophosphate metabolic process","type":"exact"},{"name":"thiamine pyrophosphate metabolism","type":"exact"}],"termid":"GO:0042357","terms_by_termid":{"GO:0009229":null}}


id: PBO:0063752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 17","termid":"PBO:0063752"}


id: PBO:0059494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrophage stimulating 1 receptor","termid":"PBO:0059494"}


id: PATO:0000977
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000977 absolute permeability value (obsolete PATO:0000977)","termid":"PATO:0000977"}


id: GO:0036267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth of colonies in filamentous chains of cells into a substrate.","definition_xrefs":["GOC:di","PMID:22276126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth of unicellular organism as a thread of attached cells","termid":"GO:0070783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"invasive filamentous growth","synonyms":[{"name":"invasive growth","type":"exact"}],"termid":"GO:0036267"}


id: GO:0042014
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-19 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-19 receptor activity","synonyms":[{"name":"IL-19 receptor activity","type":"exact"},{"name":"IL-19R","type":"exact"}],"termid":"GO:0042014"}


id: PBO:0069489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 756, pseudogene","termid":"PBO:0069489"}


id: PBO:0028064
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_plasma_membrane_of_cell_tip_during_vegetative_growth","termid":"PBO:0028064"}


id: PBO:0000361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rad32 nuclease","termid":"PBO:0000361"}


id: PBO:0004752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Ste11","termid":"PBO:0004752"}


id: PBO:0060670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudE neurodevelopment protein 1 like 1","termid":"PBO:0060670"}


id: PBO:0050540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxanthine phosphoribosyltransferase 1 pseudogene 1","termid":"PBO:0050540"}


id: GO:0045886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of synaptic assembly at neuromuscular junction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic assembly at neuromuscular junction","termid":"GO:0008582"},{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"negative regulation of synapse assembly","termid":"GO:0051964"},{"relation_name":"is_a","term_name":"negative regulation of neuromuscular junction development","termid":"GO:1904397"},{"relation_name":"negatively_regulates","term_name":"synaptic assembly at neuromuscular junction","termid":"GO:0051124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of synaptic assembly at neuromuscular junction","synonyms":[{"name":"down regulation of synaptic growth at neuromuscular junction","type":"exact"},{"name":"down-regulation of synaptic growth at neuromuscular junction","type":"exact"},{"name":"downregulation of synaptic growth at neuromuscular junction","type":"exact"},{"name":"inhibition of synaptic growth at neuromuscular junction","type":"narrow"},{"name":"negative regulation of synaptic growth at neuromuscular junction","type":"related"}],"termid":"GO:0045886"}


id: PBO:0059185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Morf4 family associated protein 1 like 1","termid":"PBO:0059185"}


id: PBO:0082677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the EKC/KEOPS protein complex; EKC/KEOPS complex is required for t6A tRNA modification and telomeric TG1-3 recombination; may have role in transcription; other complex members are Kae1p, Gon7p, Bud32p, and Cgi121p","termid":"PBO:0082677"}


id: GO:0036113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of very long-chain fatty-acyl-CoAs, any derivative of coenzyme A in which the sulfhydryl group is in a thioester linkage with a very long-chain fatty-acyl group. A very long-chain fatty acid has an aliphatic tail containing more than 22 carbons.","definition_xrefs":["GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"very long-chain fatty-acyl-CoA metabolic process","termid":"GO:0036111"},{"relation_name":"is_a","term_name":"fatty-acyl-CoA catabolic process","termid":"GO:0036115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0006790","GO:0044248","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"very long-chain fatty-acyl-CoA catabolic process","synonyms":[{"name":"very long-chain fatty-acyl-CoA breakdown","type":"exact"},{"name":"very long-chain fatty-acyl-CoA catabolism","type":"exact"},{"name":"very long-chain fatty-acyl-CoA degradation","type":"exact"}],"termid":"GO:0036113"}


id: GO:0008651
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete actin polymerizing activity (obsolete GO:0008651)","synonyms":[{"name":"actin polymerizing activity","type":"exact"}],"termid":"GO:0008651"}


id: GO:1902286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any semaphorin-plexin signaling pathway that is involved in dendrite guidance.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:TermGenie","PMID:22790009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"semaphorin-plexin signaling pathway involved in neuron projection guidance","termid":"GO:1902285"},{"relation_name":"part_of","term_name":"dendrite guidance","termid":"GO:0070983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"semaphorin-plexin signaling pathway involved in dendrite guidance","synonyms":[{"name":"semaphorin-plexin signaling pathway involved in dendritic guidance","type":"exact"},{"name":"semaphorin-plexin signalling pathway involved in dendrite guidance","type":"exact"},{"name":"semaphorin-plexin signalling pathway involved in dendritic guidance","type":"exact"}],"termid":"GO:1902286"}


id: GO:0080023
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: a (3R)-3-hydroxyacyl-CoA = a (2E)-enoyl-CoA + H2O.","definition_xrefs":["RHEA:26526","PMID:16982622"],"gene_count":0,"genotype_count":0,"name":"obsolete (3R)-3-hydroxyacyl-CoA dehydratase activity (obsolete GO:0080023)","synonyms":[{"name":"3R-hydroxyacyl-CoA dehydratase activity","type":"exact"}],"termid":"GO:0080023"}


id: PBO:0050263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 41","termid":"PBO:0050263"}


id: GO:0102678
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (5alpha,22S,24R)-22-hydroxyergostan-3-one + NADP = H+ + (22S)-22-hydroxycampest-4-en-3-one + NADPH.","definition_xrefs":["GOC:pz","EC:1.3.1.-"],"gene_count":0,"genotype_count":0,"name":"obsolete 22-alpha-hydroxy-campest-4-en-3-one,NADPH:steroid 5alpha-reductase activity (obsolete GO:0102678)","termid":"GO:0102678"}


id: GO:0140498
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex with alpha-(1->6)-mannosyltransferase activity, located in the cis Golgi membrane; adds mannan to N-linked glycans on proteins as part of the priming and elongation of alpha 1,6-linked Man backbone. In S. cerevisiae, contains Mnn9p and Van1p.","definition_xrefs":["PMID:9430634"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannan polymerase complex","termid":"GO:0000136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005794","GO:0005575"],"is_obsolete":false,"name":"mannan polymerase I complex","termid":"GO:0140498"}


id: FYPO:0004465
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to camptothecin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to camptothecin","synonyms":[{"name":"normal protein phosphorylation during cellular response to CPT","type":"exact"},{"name":"normal protein phosphorylation during cellular response to camptothecin during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to camptothecin during vegetative growth","type":"exact"}],"termid":"FYPO:0004465"}


id: FYPO:0005564
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which stable microtubule bundles are shorter and thinner than normal. Stable microtubule bundles, also called Q-MT bundles, are found in quiescent cells.","definition_xrefs":["PMID:26124291","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thin stable microtubule bundle","termid":"FYPO:0005560"},{"relation_name":"is_a","term_name":"short stable microtubule bundle","termid":"FYPO:0005562"},{"relation_name":"is_a","term_name":"short disorganized microtubule bundle","termid":"FYPO:0005796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0002399","FYPO:0001320","FYPO:0000054"],"is_obsolete":false,"name":"short, thin stable microtubule bundle","synonyms":[{"name":"decreased stable microtubule bundle length and thickness","type":"exact"},{"name":"short, thin Q-MT bundles","type":"exact"},{"name":"short, thin quiescent cell MT bundle","type":"exact"},{"name":"short, thin quiescent cell microtubule bundle","type":"exact"},{"name":"short, thin stable microtubule array","type":"related"},{"name":"short, thin static microtubule bundle","type":"exact"}],"termid":"FYPO:0005564"}


id: PBO:0004402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid-diacylglycerol acyltransferase Plh1","termid":"PBO:0004402"}


id: PBO:0108936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 15","termid":"PBO:0108936"}


id: GO:0002769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a receptor on the surface of a natural killer cell capable of inhibiting an immune effector process contributing to an immune response.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:15771571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-inhibiting cell surface receptor signaling pathway","termid":"GO:0002767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"natural killer cell inhibitory signaling pathway","synonyms":[{"name":"Ly49 inhibitory receptor signaling pathway","type":"related"},{"name":"NK cell inhibitory signaling pathway","type":"exact"},{"name":"inhibitory KIR signaling pathway","type":"narrow"},{"name":"killer cell inhibitory receptor signaling pathway","type":"narrow"},{"name":"natural killer cell inhibitory signalling pathway","type":"exact"}],"termid":"GO:0002769"}


id: PBO:0080549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 8","termid":"PBO:0080549"}


id: GO:0031406
data:
  {"annotated_genes":["SJAG_03861"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016594"}]},"cv_name":"molecular_function","definition":"Binding to a carboxylic acid, an organic acid containing one or more carboxyl (COOH) groups or anions (COO-).","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"organic acid binding","termid":"GO:0043177"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03861":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"carboxylic acid binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031406","terms_by_termid":{"GO:0016594":null}}


id: GO:0010826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of centrosome duplication. Centrosome duplication is the replication of a centrosome, a structure comprised of a pair of centrioles and peri-centriolar material from which a microtubule spindle apparatus is organized.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of centrosome duplication","termid":"GO:0010824"},{"relation_name":"is_a","term_name":"negative regulation of centrosome cycle","termid":"GO:0046606"},{"relation_name":"negatively_regulates","term_name":"centrosome duplication","termid":"GO:0051298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of centrosome duplication","termid":"GO:0010826"}


id: PBO:0001680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein, splicing factor Cdc5","termid":"PBO:0001680"}


id: GO:0042850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-sorbose, the L-enantiomer of the ketohexose xylo-2-hexulose.","definition_xrefs":["ISBN:0198506732","GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-sorbose metabolic process","termid":"GO:0019312"},{"relation_name":"is_a","term_name":"sorbose catabolic process","termid":"GO:0042848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-sorbose catabolic process","synonyms":[{"name":"L-sorbose breakdown","type":"exact"},{"name":"L-sorbose catabolism","type":"exact"},{"name":"L-sorbose degradation","type":"exact"}],"termid":"GO:0042850"}


id: PBO:0084564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane-embedded ubiquitin-protein ligase and retrotranslocase; ER and inner nuclear membrane localized RING-CH domain E3 ligase involved in ER-associated protein degradation (ERAD); aids Cdc48p in the extraction of faulty membrane proteins; targets misfolded cytosolic/nucleoplasmic domains of soluble and membrane embedded proteins (ERAD-C) and Sbh2p, a transmembrane domain-containing substrate (ERAD-M); C-terminal element, conserved in human ortholog MARCH6, determines substrate selectivity","termid":"PBO:0084564"}


id: PBO:0071792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P/MRP subunit p38","termid":"PBO:0071792"}


id: FYPO:0006650
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of an ATP-dependent protein-DNA complex displacement activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"abnormal ATP-dependent protein-DNA complex displacement activity","termid":"FYPO:0006650"}


id: PBO:0073114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase/reductase family 42E, member 1 pseudogene 2","termid":"PBO:0073114"}


id: FYPO:0006954
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-isoleucine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular isoleucine level","synonyms":[{"name":"increased cellular L-isoleucine level","type":"exact"},{"name":"increased cellular isoleucine level during mitotic cell cycle","type":"related"},{"name":"increased cellular isoleucine level during vegetative growth","type":"exact"},{"name":"increased isoleucine accumulation","type":"related"}],"termid":"FYPO:0006954"}


id: PBO:0035942
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_myxothiazol","termid":"PBO:0035942"}


id: PBO:0001796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-factor precursor Mfm2","termid":"PBO:0001796"}


id: PBO:0055150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2569","termid":"PBO:0055150"}


id: GO:0036155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Remodeling the acyl chains of an acylglycerol, through sequential deacylation and re-acylation reactions, to generate an acylglycerol containing different types of fatty acid acyl chains.","definition_xrefs":["GOC:mw","PMID:15364929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol metabolic process","termid":"GO:0006639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"acylglycerol acyl-chain remodeling","synonyms":[{"name":"acylglycerol acyl-chain remodelling","type":"exact"},{"name":"glyceride acyl-chain remodeling","type":"exact"}],"termid":"GO:0036155"}


id: PBO:0001298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide isomerase","termid":"PBO:0001298"}


id: PATO:0001216
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001216 volume_unit (obsolete PATO:0001216)","termid":"PATO:0001216"}


id: PBO:0030904
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cytoskeleton_organization_during_vegetative_growth","termid":"PBO:0030904"}


id: GO:2000713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of maintenance of meiotic sister chromatid cohesion along the chromosome arms.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of maintenance of meiotic sister chromatid cohesion, arms (obsolete GO:2000713)","synonyms":[{"name":"negative regulation of maintenance of meiotic sister chromatin cohesion along arms","type":"exact"},{"name":"negative regulation of maintenance of sister chromatin cohesion along arms at meiosis I","type":"exact"}],"termid":"GO:2000713"}


id: PBO:0075628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shadow of prion protein pseudogene 1","termid":"PBO:0075628"}


id: FYPO:0003751
data:
  {"alleles_by_uniquename":{"SJAG_02763:allele-3":{"allele_type":"amino_acid_mutation","description":"S235A; S651","gene_uniquename":"SJAG_02763","name":"ned1S235A/S651","synonyms":[{"name":"refractory to phosphorylation","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-3"},"SJAG_03250:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03250","name":"sst4delta","uniquename":"SJAG_03250:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115782],"is_not":false,"summary":null,"term":"FYPO:0003751"},{"annotations":[115344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003780"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of all or part of the nuclear envelope is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02763":null,"SJAG_03250":null},"genotype_count":2,"genotypes_by_uniquename":{"ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235A/S651(S235A; S651 aa)","display_uniquename":"ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-3","expression":"Not assayed or wild type"}]}]},"sst4delta":{"display_name":"sst4delta","display_uniquename":"sst4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03250:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal nuclear envelope morphology","references_by_uniquename":{"PMID:26774782":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_03250","SJAG_02763"],"single_locus_genotype_uniquenames":["sst4delta","ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"normal nuclear envelope morphology during mitotic cell cycle","type":"exact"},{"name":"normal nuclear envelope morphology during vegetative growth","type":"exact"},{"name":"normal nuclear membrane morphology","type":"narrow"}],"termid":"FYPO:0003751","terms_by_termid":{"FYPO:0003751":null,"FYPO:0003780":null}}


id: PBO:0004049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosylxylosylprotein 3-beta-galactosyltransferase Pvg1 (predicted)","termid":"PBO:0004049"}


id: PBO:0111881
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PINc domain","termid":"PBO:0111881"}


id: PBO:0077318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 53","termid":"PBO:0077318"}


id: PBO:0064789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase, Mg2+/Mn2+ dependent 1J","termid":"PBO:0064789"}


id: GO:0048750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the compound eye corneal lens are generated and organized.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"compound eye morphogenesis","termid":"GO:0001745"},{"relation_name":"part_of","term_name":"compound eye corneal lens development","termid":"GO:0048058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye corneal lens morphogenesis","termid":"GO:0048750"}


id: PBO:0041562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 81","termid":"PBO:0041562"}


id: PBO:0041870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calsequestrin 2","termid":"PBO:0041870"}


id: GO:0007348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle process that modulates the rate or extent of the progression through the syncytial blastoderm mitotic cell cycle.","definition_xrefs":["GOC:tb","GOC:dph","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle, embryonic","termid":"GO:0009794"},{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"regulates","term_name":"syncytial blastoderm mitotic cell cycle","termid":"GO:0035186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of syncytial blastoderm mitotic cell cycle","synonyms":[{"name":"modulation of syncytial blastoderm cell cycle progression","type":"exact"},{"name":"regulation of progression through syncytial blastoderm mitotic cell cycle","type":"exact"},{"name":"regulation of syncytial blastoderm cell cycle","type":"exact"},{"name":"regulation of syncytial blastoderm cell cycle progression","type":"exact"},{"name":"syncytial blastoderm cell cycle modulation","type":"exact"},{"name":"syncytial blastoderm cell cycle regulation","type":"exact"},{"name":"syncytial blastoderm cell cycle regulator","type":"related"}],"termid":"GO:0007348"}


id: PBO:0028264
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_pheromone","termid":"PBO:0028264"}


id: GO:0071891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An N-terminal peptidyl-proline dimethylation process that contributes to translation.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-proline dimethylation involved in translation (obsolete GO:0071891)","termid":"GO:0071891"}


id: PBO:0069269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 525, pseudogene","termid":"PBO:0069269"}


id: PBO:0030294
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-irregular_colony_morphology","termid":"PBO:0030294"}


id: PBO:0060336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin VB pseudogene 1","termid":"PBO:0060336"}


id: GO:0003986
data:
  {"annotated_genes":["SJAG_02985","SJAG_02769"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75490,87465],"is_not":false,"summary":null,"term":"GO:0003986"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + H2O = acetate + CoA + H+.","definition_xrefs":["RHEA:20289","EC:3.1.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA hydrolase activity","termid":"GO:0016289"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02769":null,"SJAG_02985":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"acetyl-CoA hydrolase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2066779","KEGG_REACTION:R00227","Reactome:R-HSA-390304","MetaCyc:ACETYL-COA-HYDROLASE-RXN"],"synonyms":[{"name":"acetyl coenzyme A acylase activity","type":"related"},{"name":"acetyl coenzyme A deacylase activity","type":"related"},{"name":"acetyl coenzyme A hydrolase activity","type":"related"},{"name":"acetyl-CoA acylase activity","type":"related"},{"name":"acetyl-CoA deacylase activity","type":"related"},{"name":"acetyl-CoA thiol esterase activity","type":"related"}],"termid":"GO:0003986","terms_by_termid":{"GO:0003986":null}}


id: GO:0050695
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoylformate = benzaldehyde + CO2.","definition_xrefs":["MetaCyc:BENZOYLFORMATE-DECARBOXYLASE-RXN","EC:4.1.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"benzoylformate decarboxylase activity","secondary_identifiers":["RHEA:23368","UM-BBD_reactionID:r1049"],"synonyms":[{"name":"benzoylformate carboxy-lyase (benzaldehyde-forming)","type":"related"},{"name":"benzoylformate carboxy-lyase activity","type":"related"},{"name":"phenylglyoxylate decarboxylase activity","type":"exact"}],"termid":"GO:0050695"}


id: PBO:0034074
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-contributes_to_frequency_of_condition","termid":"PBO:0034074"}


id: PR:Q9P7D3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP4H10.16c gene.","definition_xrefs":["UniProtKB:Q9P7D3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WHI2-like protein P4H10.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.16c","synonyms":[{"name":"Spom972h-SPBP4H10.16c","type":"exact"}],"termid":"PR:Q9P7D3"}


id: PBO:0080668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP four-disulfide core domain 13","termid":"PBO:0080668"}


id: PBO:0055651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3091","termid":"PBO:0055651"}


id: FYPO:0004514
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell phenotype in which a cell has no septum, is elongated, and is viable.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable elongated aseptate vegetative cell (obsolete FYPO:0004514)","synonyms":[{"name":"viable elongated aseptate cell during mitotic cell cycle","type":"related"},{"name":"viable elongated aseptate cell during vegetative growth","type":"exact"},{"name":"viable long aseptate cell","type":"exact"}],"termid":"FYPO:0004514"}


id: GO:0030409
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-formimidoyltetrahydrofolate + L-glutamate = tetrahydrofolate + N-formimidoyl-L-glutamate.","definition_xrefs":["RHEA:15097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"glutamate formimidoyltransferase activity","secondary_identifiers":["MetaCyc:GLUTAMATE-FORMIMINOTRANSFERASE-RXN","EC:2.1.2.5","GO:0030407"],"synonyms":[{"name":"5-formimidoyltetrahydrofolate:L-glutamate N-formimidoyltransferase activity","type":"related"},{"name":"formimidoyltransferase activity","type":"broad"},{"name":"formiminoglutamic acid transferase activity","type":"related"},{"name":"formiminoglutamic formiminotransferase activity","type":"related"},{"name":"formiminotransferase activity","type":"broad"},{"name":"glutamate formiminotransferase activity","type":"exact"},{"name":"glutamate formyltransferase activity","type":"related"}],"termid":"GO:0030409"}


id: GO:1900023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of D-erythro-sphingosine kinase activity.","definition_xrefs":["GOC:TermGenie","GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of D-erythro-sphingosine kinase activity (obsolete GO:1900023)","synonyms":[{"name":"positive regulation of sphingosine kinase activity","type":"exact"},{"name":"up regulation of D-erythro-sphingosine kinase activity","type":"related"},{"name":"up regulation of sphingosine kinase activity","type":"exact"}],"termid":"GO:1900023"}


id: PBO:0047648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 4 pseudogene 1","termid":"PBO:0047648"}


id: PBO:0056248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male germ cell associated kinase","termid":"PBO:0056248"}


id: PBO:0039450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and MYND domain containing 1","termid":"PBO:0039450"}


id: PBO:0057349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 544a","termid":"PBO:0057349"}


id: GO:0062074
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An area where exine is reduced or absent, in the pollen wall.","definition_xrefs":["PMID:30150313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"pollen wall","termid":"GO:0043667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"pollen aperture","termid":"GO:0062074"}


id: GO:0045465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of the R8 photoreceptor.","definition_xrefs":["PMID:11880339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor cell differentiation","termid":"GO:0001751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"R8 cell differentiation","termid":"GO:0045465"}


id: PBO:0071787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P/MRP subunit p14","termid":"PBO:0071787"}


id: PBO:0053460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 415","termid":"PBO:0053460"}


id: PR:O94405
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC126.13c gene.","definition_xrefs":["UniProtKB:O94405","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C126.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.13c","synonyms":[{"name":"Spom972h-SPCC126.13c","type":"exact"}],"termid":"PR:O94405"}


id: GO:0005862
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A form of the tropomyosin dimer found associated with actin and the troponin complex in muscle thin filaments.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"striated muscle thin filament","termid":"GO:0005865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0015629","GO:0005575"],"is_obsolete":false,"name":"muscle thin filament tropomyosin","termid":"GO:0005862"}


id: PBO:0113036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall mannoprotein that localizes to birth scars of daughter cells; linked to beta-1,3- and beta-1,6-glucan heteropolymer through phosphodiester bond; required for propionic acid resistance; targeted to vacuole via AP-3 pathway","termid":"PBO:0113036"}


id: GO:0002492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of a peptide antigen to the antigen binding groove of an MHC class Ib protein complex. Class Ib here refers to non-classical class I molecules, such as those of the HLA-E gene family.","definition_xrefs":["PMID:15928678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide antigen assembly with MHC protein complex","termid":"GO:0002501"},{"relation_name":"part_of","term_name":"MHC class Ib protein complex assembly","termid":"GO:0002398"},{"relation_name":"part_of","term_name":"antigen processing and presentation of peptide antigen via MHC class Ib","termid":"GO:0002428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"peptide antigen assembly with MHC class Ib protein complex","termid":"GO:0002492"}


id: GO:0090211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the establishment of the blood-brain barrier, a selectively permeable structural and functional barrier that exists between the capillaries and the brain.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of establishment of blood-brain barrier","termid":"GO:0090210"},{"relation_name":"positively_regulates","term_name":"establishment of blood-brain barrier","termid":"GO:0060856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of establishment of blood-brain barrier","synonyms":[{"name":"positive regulation of establishment of BBB","type":"exact"}],"termid":"GO:0090211"}


id: GO:1903233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcium ion-dependent exocytosis of neurotransmitter.","definition_xrefs":["PMID:16782817","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion-dependent exocytosis","termid":"GO:0017158"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle exocytosis","termid":"GO:2000300"},{"relation_name":"regulates","term_name":"calcium ion-regulated exocytosis of neurotransmitter","termid":"GO:0048791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of calcium ion-dependent exocytosis of neurotransmitter","termid":"GO:1903233"}


id: PR:O42919
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16A3.14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein S26A, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.14","synonyms":[{"name":"Spom972h-SPBC16A3.14","type":"exact"}],"termid":"PR:O42919"}


id: GO:0006631
data:
  {"annotated_genes":["SJAG_03471","SJAG_03180","SJAG_00305","SJAG_00902","SJAG_03130","SJAG_00099","SJAG_03972","SJAG_01458","SJAG_01238","SJAG_01402","SJAG_03313","SJAG_02007","SJAG_00102","SJAG_00630","SJAG_00706","SJAG_04570","SJAG_01396","SJAG_01356","SJAG_02763","SJAG_03909","SJAG_00413","SJAG_01946","SJAG_01300","SJAG_03553","SJAG_04913","SJAG_00221","SJAG_02717","SJAG_03198","SJAG_04107","SJAG_00734","SJAG_04972","SJAG_03943","SJAG_02769","SJAG_03526","SJAG_02885","SJAG_00947"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87826,89550,97306,97726,104843,111929],"is_not":false,"summary":null,"term":"GO:0006631"},{"annotations":[107983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001561"},{"annotations":[72150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006635"},{"annotations":[84153,94434,91053,93384,87463,93751,94342,96823,98139,108654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006633"},{"annotations":[87481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009062"},{"annotations":[94277,101999,107467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030497"},{"annotations":[85536,87964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034625"},{"annotations":[85537,87965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019367"},{"annotations":[108839,93234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009107"},{"annotations":[100438,93752,96824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042759"},{"annotations":[109918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042758"},{"annotations":[104495,109577,101715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001676"},{"annotations":[107406],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045717"},{"annotations":[93754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900535"},{"annotations":[95109],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010510"},{"annotations":[110562,69198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006636"},{"annotations":[102001,99582,85539,87968,107468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042761"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"cellular lipid metabolic process","termid":"GO:0044255"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00099":null,"SJAG_00102":null,"SJAG_00221":null,"SJAG_00305":null,"SJAG_00413":null,"SJAG_00630":null,"SJAG_00706":null,"SJAG_00734":null,"SJAG_00902":null,"SJAG_00947":null,"SJAG_01238":null,"SJAG_01300":null,"SJAG_01356":null,"SJAG_01396":null,"SJAG_01402":null,"SJAG_01458":null,"SJAG_01946":null,"SJAG_02007":null,"SJAG_02717":null,"SJAG_02763":null,"SJAG_02769":null,"SJAG_02885":null,"SJAG_03130":null,"SJAG_03180":null,"SJAG_03198":null,"SJAG_03313":null,"SJAG_03471":null,"SJAG_03526":null,"SJAG_03553":null,"SJAG_03909":null,"SJAG_03943":null,"SJAG_03972":null,"SJAG_04107":null,"SJAG_04570":null,"SJAG_04913":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"fatty acid metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Fatty_acid_metabolism"],"synonyms":[{"name":"fatty acid metabolism","type":"exact"}],"termid":"GO:0006631","terms_by_termid":{"GO:0001561":null,"GO:0001676":null,"GO:0006631":null,"GO:0006633":null,"GO:0006635":null,"GO:0006636":null,"GO:0009062":null,"GO:0009107":null,"GO:0010510":null,"GO:0019367":null,"GO:0030497":null,"GO:0034625":null,"GO:0042758":null,"GO:0042759":null,"GO:0042761":null,"GO:0045717":null,"GO:1900535":null}}


id: GO:0035269
data:
  {"annotated_genes":["SJAG_04316","SJAG_01264","SJAG_04053"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89061,97625,102077],"is_not":false,"summary":null,"term":"GO:0035269"}]},"cv_name":"biological_process","definition":"The transfer of mannose from dolichyl activated mannose to the hydroxyl group of a seryl or threonyl residue of a protein acceptor molecule, to form an O-linked protein-sugar linkage.","definition_xrefs":["GOC:bf","PMID:9878797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein O-linked glycosylation","termid":"GO:0006493"},{"relation_name":"is_a","term_name":"protein mannosylation","termid":"GO:0035268"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01264":null,"SJAG_04053":null,"SJAG_04316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006486","GO:0008150"],"is_obsolete":false,"name":"protein O-linked mannosylation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein amino acid O-linked mannosylation","type":"exact"}],"termid":"GO:0035269","terms_by_termid":{"GO:0035269":null}}


id: PBO:0073487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SGO1 antisense RNA 1","termid":"PBO:0073487"}


id: GO:0048786
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized region of the plasma membrane and cell cortex of a presynaptic neuron; encompasses a region of the plasma membrane where synaptic vesicles dock and fuse, and a specialized cortical cytoskeletal matrix.","definition_xrefs":["GOC:dl","GOC:dh","PMID:3152289","GOC:ef","GOC:jid","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"presynapse","termid":"GO:0098793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"presynaptic active zone","secondary_identifiers":["NIF_Subcellular:sao792027222"],"synonyms":[{"name":"pre-synaptic active zone","type":"exact"},{"name":"pre-synaptic active zone component","type":"narrow"},{"name":"presynaptic specialization","type":"exact"}],"termid":"GO:0048786"}


id: PBO:0078932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCG) 2-1","termid":"PBO:0078932"}


id: GO:2000825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of androgen receptor activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase II","termid":"GO:0006357"},{"relation_name":"is_a","term_name":"positive regulation of DNA-binding transcription factor activity","termid":"GO:0051091"},{"relation_name":"is_a","term_name":"positive regulation of signaling receptor activity","termid":"GO:2000273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006355","GO:0008150","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"positive regulation of androgen receptor activity","termid":"GO:2000825"}


id: GO:0032602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of a chemokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels. All chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation. Some chemokines are considered pro-inflammatory and can be induced during an immune response to recruit cells of the immune system to a site of infection, while others are considered homeostatic and are involved in controlling the migration of cells during normal processes of tissue maintenance or development. Chemokines are found in all vertebrates, some viruses and some bacteria.","definition_xrefs":["GOC:BHF","ISBN:0198506732","PMID:12183377","GOC:rl","Wikipedia:Chemokine"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"chemokine production","secondary_identifiers":["GO:0090195","GO:0050755","GO:0042033"],"synonyms":[{"name":"chemokine anabolism","type":"exact"},{"name":"chemokine biosynthesis","type":"exact"},{"name":"chemokine biosynthetic process","type":"narrow"},{"name":"chemokine formation","type":"exact"},{"name":"chemokine metabolic process","type":"narrow"},{"name":"chemokine secretion","type":"narrow"},{"name":"chemokine synthesis","type":"exact"}],"termid":"GO:0032602"}


id: GO:0072074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a kidney mesenchyme from an initial condition to its mature state. This process begins with the formation of kidney mesenchyme and ends with the mature structure. Kidney mesenchyme is the tissue made up of loosely connected mesenchymal cells in the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchyme development","termid":"GO:0060485"},{"relation_name":"part_of","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kidney mesenchyme development","termid":"GO:0072074"}


id: GO:1902944
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any aspartic-type endopeptidase activity that is involved in amyloid precursor protein catabolic process.","definition_xrefs":["PMID:24577224","GOC:sjp","GOC:TermGenie","PMID:10206644","GO_REF:0000061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartic-type endopeptidase activity","termid":"GO:0004190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0016787","GO:0003824","GO:0008233","GO:0003674"],"is_obsolete":false,"name":"aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process","synonyms":[{"name":"aspartate protease activity involved in APP catabolic process","type":"narrow"},{"name":"aspartate protease activity involved in APP catabolism","type":"narrow"},{"name":"aspartate protease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"aspartate protease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"aspartate protease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"aspartate protease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"aspartic endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"aspartic endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"aspartic endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"aspartic endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"aspartic endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"aspartic endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"aspartic protease activity involved in APP catabolic process","type":"narrow"},{"name":"aspartic protease activity involved in APP catabolism","type":"narrow"},{"name":"aspartic protease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"aspartic protease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"aspartic protease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"aspartic protease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"aspartic-type endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"aspartic-type endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"aspartic-type endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"aspartic-type endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"aspartic-type endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"aspartyl protease activity involved in APP catabolic process","type":"narrow"},{"name":"aspartyl protease activity involved in APP catabolism","type":"narrow"},{"name":"aspartyl protease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"aspartyl protease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"aspartyl protease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"aspartyl protease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"carboxyl protease activity involved in APP catabolic process","type":"narrow"},{"name":"carboxyl protease activity involved in APP catabolism","type":"narrow"},{"name":"carboxyl protease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"carboxyl protease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"carboxyl protease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"carboxyl protease activity involved in amyloid precursor protein degradation","type":"narrow"}],"termid":"GO:1902944"}


id: PBO:0049084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 139","termid":"PBO:0049084"}


id: PBO:0034722
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hydrogen peroxide induced Stress Regulator","termid":"PBO:0034722"}


id: GO:0060856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the barrier between the blood and the brain. The cells in the brain are packed tightly together preventing the passage of most molecules from the blood into the brain. Only lipid soluble molecules or those that are actively transported can pass through the blood-brain barrier.","definition_xrefs":["GOC:aruk","GOC:dph","GOC:sart","PMID:20080302","PMID:30280653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of blood-brain barrier","synonyms":[{"name":"establishment of BBB","type":"exact"},{"name":"establishment of blood/brain barrier","type":"exact"}],"termid":"GO:0060856"}


id: PBO:0077445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 178B","termid":"PBO:0077445"}


id: GO:0097401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acidification of the synaptic vesicle lumen via transport of protons into the vesicle. The resulting electrochemical gradient powers neurotransmitter loading.","definition_xrefs":["GOC:dsf","PMID:21172605","PMID:22875945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"neuron cellular homeostasis","termid":"GO:0070050"},{"relation_name":"is_a","term_name":"proton transmembrane transport","termid":"GO:1902600"},{"relation_name":"part_of","term_name":"synaptic vesicle maturation","termid":"GO:0016188"},{"relation_name":"part_of","term_name":"synaptic vesicle cycle","termid":"GO:0099504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0016192","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"synaptic vesicle lumen acidification","synonyms":[{"name":"synaptic vesicle lumen pH reduction","type":"exact"},{"name":"synaptic vesicle proton loading","type":"exact"}],"termid":"GO:0097401"}


id: FYPO:0004752
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of phleomycin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0002682","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"resistance to phleomycin","synonyms":[{"name":"resistance to phleomycin during mitotic cell cycle","type":"related"},{"name":"resistance to phleomycin during vegetative growth","type":"exact"},{"name":"resistant to phleomycin","type":"exact"}],"termid":"FYPO:0004752"}


id: GO:0033807
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: stearoyl-CoA + malonyl-CoA + 2 NAD(P)H + 2 H+ = icosanoyl-CoA + CO2 + 2 NAD(P)+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete icosanoyl-CoA synthase activity (obsolete GO:0033807)","synonyms":[{"name":"C18-CoA elongase activity","type":"related"},{"name":"acyl-CoA elongase activity","type":"related"},{"name":"stearoyl-CoA elongase activity","type":"related"},{"name":"stearoyl-CoA:malonyl-CoA C-acyltransferase (decarboxylating, oxoacyl- and enoyl-reducing) activity","type":"related"}],"termid":"GO:0033807"}


id: PBO:0091249
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-One, Three-Galactosyltransferase","termid":"PBO:0091249"}


id: PBO:0005737
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condensin subunit CuT3 Interacting protein","termid":"PBO:0005737"}


id: PBO:0042640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 15 pseudogene","termid":"PBO:0042640"}


id: GO:0002295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a CD4-positive, alpha-beta T cell becomes committed to becoming a T-helper cell, a CD4-positive, alpha-beta T cell specialized to promote various immunological processes.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell lineage commitment","termid":"GO:0043373"},{"relation_name":"part_of","term_name":"T-helper cell differentiation","termid":"GO:0042093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper cell lineage commitment","synonyms":[{"name":"T-helper cell fate commitment","type":"exact"},{"name":"Th0 lineage commitment","type":"related"},{"name":"Thp lineage commitment","type":"related"}],"termid":"GO:0002295"}


id: GO:0003836
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CMP-N-acetylneuraminate + beta-D-galactosyl-(1->3)-N-acetyl-alpha-D-galactosaminyl-R = CMP + alpha-N-acetylneuraminyl-(2->3)-beta-D-galactosyl-(1->3)-N-acetyl-alpha-D-galactosaminyl-R.","definition_xrefs":["EC:2.4.3.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialyltransferase activity","termid":"GO:0008373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"beta-galactoside (CMP) alpha-2,3-sialyltransferase activity","secondary_identifiers":["MetaCyc:2.4.99.4-RXN","Reactome:R-HSA-1912378","RHEA:21616","Reactome:R-HSA-9605600","Reactome:R-HSA-1022129","Reactome:R-HSA-9603987","Reactome:R-HSA-9845538","Reactome:R-HSA-9844860","Reactome:R-HSA-3656258","Reactome:R-HSA-981497","Reactome:R-HSA-2046285","Reactome:R-HSA-4084984"],"termid":"GO:0003836"}


id: GO:0010855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and decreases the activity of adenylate cyclase.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase inhibitor activity","termid":"GO:0010852"},{"relation_name":"is_a","term_name":"adenylate cyclase regulator activity","termid":"GO:0010854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0004857","GO:0098772","GO:0030234","GO:0003674","GO:0140678"],"is_obsolete":false,"name":"adenylate cyclase inhibitor activity","termid":"GO:0010855"}


id: PBO:0075235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 7","termid":"PBO:0075235"}


id: GO:0031157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the size of the aggregate formed during sorocarp formation.","definition_xrefs":["GOC:mtg_sensu","GOC:mah","PMID:4338436","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of aggregation involved in sorocarp development","termid":"GO:0060176"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of aggregate size involved in sorocarp development","synonyms":[{"name":"regulation of aggregation during fruiting body biosynthesis","type":"related"},{"name":"regulation of aggregation during fruiting body formation","type":"related"}],"termid":"GO:0031157"}


id: PBO:0069137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 388, pseudogene","termid":"PBO:0069137"}


id: GO:0160134
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A protein adaptor activity characterized by the capacity to selectively recognize and interact with RNA molecules in a sequence-specific manner. Entities possessing this activity typically exhibit discerning binding preferences for specific nucleotide sequences within RNA molecules, enabling the identification and engagement of distinct RNA motifs or structural elements. This function is integral to various biological processes, including RNA processing, transport, and regulatory mechanisms, contributing to the specificity and precision of cellular RNA-related activities.","definition_xrefs":["PMID:14749727","PMID:17036044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA adaptor activity","termid":"GO:0140517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030674","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"protein-RNA sequence-specific adaptor activity","termid":"GO:0160134"}


id: PR:O14223
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tvp15 gene.","definition_xrefs":["UniProtKB:O14223","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi apparatus membrane protein tvp15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.04","synonyms":[{"name":"Spom972h-tvp15","type":"exact"}],"termid":"PR:O14223"}


id: PBO:0055042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2457","termid":"PBO:0055042"}


id: PBO:0083642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Eisosome core component; eisosomes are large immobile patch structures at the cell cortex associated with endocytosis; phosphorylated on Thr233 upon Pkc1p hyperactivation in a Slt2p MAPK-dependent fashion; null mutants show activation of Pkc1p/Ypk1p stress resistance pathways; member of the BAR domain family","termid":"PBO:0083642"}


id: GO:0033869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a nucleoside bisphosphate, a compound consisting of a nucleobase linked to a deoxyribose or ribose sugar esterified with one phosphate group attached to each of two different hydroxyl groups on the sugar.","definition_xrefs":["GOC:pde","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside bisphosphate metabolic process","termid":"GO:0033865"},{"relation_name":"is_a","term_name":"nucleoside phosphate catabolic process","termid":"GO:1901292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"nucleoside bisphosphate catabolic process","synonyms":[{"name":"nucleoside bisphosphate breakdown","type":"exact"},{"name":"nucleoside bisphosphate catabolism","type":"exact"},{"name":"nucleoside bisphosphate degradation","type":"exact"}],"termid":"GO:0033869"}


id: GO:0150066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of deacetylase activity.","definition_xrefs":["GOC:aruk","PMID:19457097","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hydrolase activity","termid":"GO:0051346"},{"relation_name":"is_a","term_name":"regulation of deacetylase activity","termid":"GO:0150065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of deacetylase activity","termid":"GO:0150066"}


id: PBO:0063887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class P","termid":"PBO:0063887"}


id: GO:0010197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The merging of the polar nuclei, the two nuclei contained within the same cell that are created from the mitotic division of the megaspore during angiosperm reproduction. Polar nuclear fusion takes place in the ovule, forming in the fusion nucleus and giving rise to the endosperm when fertilized.","definition_xrefs":["GOC:mtg_plant","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"karyogamy","termid":"GO:0000741"},{"relation_name":"part_of","term_name":"embryo sac central cell differentiation","termid":"GO:0009559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polar nucleus fusion","termid":"GO:0010197"}


id: PBO:0078823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon AGG) 2-6","termid":"PBO:0078823"}


id: GO:0160120
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A mitochondrial complex that catalyzes the oxidative decarboxylation of branched-chain alpha-keto acids derived from L-leucine, L-isoleucine, and L-valine to branched-chain acyl-CoAs. The complex is organized around a 24-meric cubic core of the dihydrolipoyl transacylase (E2) with multiple (about 6 to 12) copies of the branched-chain alpha-ketoacid dehydrogenase (E1, consisting of alpha and beta subunits), about 6 copies of the dimeric dihydrolipoyl dehydrogenase (E3), and a small number of copies of the E1-specific kinase and phosphatase.","definition_xrefs":["PMID:9582350","PMID:10745006","PMID:3593587"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial branched-chain alpha-keto acid dehydrogenase complex (obsolete GO:0160120)","synonyms":[{"name":"BCKD complex","type":"exact"}],"termid":"GO:0160120"}


id: FYPO:0000506
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear export is abnormal. Nuclear export is the directed movement of any substance out of the nucleus; export of all substances or a specific substance may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear transport during vegetative growth","termid":"FYPO:0000518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal nuclear export","synonyms":[{"name":"abnormal nuclear export during mitotic cell cycle","type":"related"},{"name":"abnormal nuclear export during vegetative growth","type":"exact"},{"name":"nuclear export: abnormal","type":"related"}],"termid":"FYPO:0000506"}


id: PBO:0060912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEXN antisense RNA 1","termid":"PBO:0060912"}


id: GO:0017121
data:
  {"annotated_genes":["SJAG_01470"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92686],"is_not":false,"summary":null,"term":"GO:0017121"}]},"cv_name":"biological_process","definition":"The movement of a population of phospholipid molecules from one leaflet of the plasma membrane bilayer to the opposite leaflet, resulting in loss of lipid asymmetry and surface exposure of phosphatidylserine (PS) and phosphatidylethanolamine (PE).","definition_xrefs":["PMID:20043909","PMID:20302864","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane organization","termid":"GO:0007009"},{"relation_name":"is_a","term_name":"phospholipid translocation","termid":"GO:0045332"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01470":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0061024"],"is_obsolete":false,"name":"plasma membrane phospholipid scrambling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PL scrambling","type":"exact"},{"name":"phospholipid scrambling","type":"related"}],"termid":"GO:0017121","terms_by_termid":{"GO:0017121":null}}


id: GO:0090695
data:
  {"annotated_genes":["SJAG_04508","SJAG_02606"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83903,106688],"is_not":false,"summary":null,"term":"GO:0090695"}]},"cv_name":"cellular_component","definition":"A eukaryotically conserved heterodimeric protein complex (comprising Wings apart-like protein and the Pds5 Armadillo repeat cohesin associated protein) involved in the loading and unloading of a cohesin complex onto DNA.","definition_xrefs":["PMID:26687354","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SMC loading complex","termid":"GO:0032116"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02606":null,"SJAG_04508":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"Wpl/Pds5 cohesin loading/unloading complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090695","terms_by_termid":{"GO:0090695":null}}


id: PBO:0038713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 8","termid":"PBO:0038713"}


id: PBO:0044928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol kinase gamma","termid":"PBO:0044928"}


id: GO:0009071
data:
  {"annotated_genes":["SJAG_03861","SJAG_01271","SJAG_03641","SJAG_02901","SJAG_03290"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006546"},{"annotations":[84705,92465,109187,83465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019464"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of amino acids of the serine family, comprising cysteine, glycine, homoserine, selenocysteine and serine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine family amino acid metabolic process","termid":"GO:0009069"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"proteinogenic amino acid catabolic process","termid":"GO:0170040"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01271":null,"SJAG_02901":null,"SJAG_03290":null,"SJAG_03641":null,"SJAG_03861":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"serine family amino acid catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"serine family amino acid breakdown","type":"exact"},{"name":"serine family amino acid catabolism","type":"exact"},{"name":"serine family amino acid degradation","type":"exact"}],"termid":"GO:0009071","terms_by_termid":{"GO:0006546":null,"GO:0019464":null}}


id: PBO:0086110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for biogenesis of 40S (small) ribosomal subunit; has similarity to the beta subunit of trimeric G-proteins and the splicing factor Prp4p; essential gene","termid":"PBO:0086110"}


id: PBO:0042981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain helicase DNA binding protein 7","termid":"PBO:0042981"}


id: PBO:0011992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Rrp14 (predicted)","termid":"PBO:0011992"}


id: SO:0002173
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An indel that is the result of base-calling or assembly error.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_alteration_artifact","termid":"SO:0002172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"indel_artifact","synonyms":[{"name":"indel artifact","type":"exact"}],"termid":"SO:0002173"}


id: GO:0010266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin B1 stimulus.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to vitamin B1","synonyms":[{"name":"response to thiamin","type":"exact"},{"name":"response to thiamine","type":"exact"}],"termid":"GO:0010266"}


id: PBO:0030938
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitochondrion_inheritance","termid":"PBO:0030938"}


id: MOD:00585
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes three (2)H deuterium atoms for three (1)H protium atoms.","definition_xrefs":["Unimod:262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deuterium substituted residue","termid":"MOD:00786"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deuterium trisubstituted residue","synonyms":[{"name":"D(H)3Res","type":"exact"},{"name":"Label:2H(3)","type":"related"},{"name":"Trideuteration","type":"related"}],"termid":"MOD:00585"}


id: PBO:0081620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 549","termid":"PBO:0081620"}


id: PBO:0078214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 7-7","termid":"PBO:0078214"}


id: PBO:0046571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 13","termid":"PBO:0046571"}


id: PBO:0090662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosidase I Ghs1","termid":"PBO:0090662"}


id: PBO:0064968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 22","termid":"PBO:0064968"}


id: GO:0110151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of biomineralization, the formation and deposition of mineral crystals by living organisms.","definition_xrefs":["PMID:22992051"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of biomineralization (obsolete GO:0110151)","synonyms":[{"name":"positive regulation of biomineral formation","type":"narrow"},{"name":"positive regulation of biomineralisation","type":"exact"},{"name":"positive regulation of mineralisation","type":"exact"},{"name":"positive regulation of mineralization","type":"exact"}],"termid":"GO:0110151"}


id: GO:0160060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process in which the drive for sleep increases sleep propensity with prolonged wakefulness.","definition_xrefs":["PMID:30509635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal-level homeostasis","termid":"GO:0048871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sleep homeostasis","termid":"GO:0160060"}


id: PBO:0087348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sphingolipid alpha-hydroxylase; functions in the alpha-hydroxylation of sphingolipid-associated very long chain fatty acids, has both cytochrome b5-like and hydroxylase/desaturase domains, not essential for growth","termid":"PBO:0087348"}


id: GO:2000527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of myeloid dendritic cell chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dendritic cell chemotaxis","termid":"GO:2000508"},{"relation_name":"regulates","term_name":"myeloid dendritic cell chemotaxis","termid":"GO:0002408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myeloid dendritic cell chemotaxis","termid":"GO:2000527"}


id: PBO:0027740
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_cell_tip_during_cellular_response_to_salt_stress","termid":"PBO:0027740"}


id: MOD:01137
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction of a lysine residue with 2,2,5,7,8-pentamethylchroman-6-sulfonyl chloride, Pmc chloride, to form N6-(2,2,5,7,8-pentamethylchroman-6-sulfonyl)-L-lysine.","definition_xrefs":["DeltaMass:310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"},{"relation_name":"is_a","term_name":"2,2,5,7,8-pentamethylchroman-6-sulfonyl chloride derivatized residue","termid":"MOD:01120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-(2,2,5,7,8-pentamethylchroman-6-sulfonyl)-L-lysine","synonyms":[{"name":"PMC lysyl","type":"exact"},{"name":"PmcLys","type":"exact"}],"termid":"MOD:01137"}


id: PBO:0071400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 6","termid":"PBO:0071400"}


id: PBO:0054007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1337","termid":"PBO:0054007"}


id: GO:1990431
data:
  {"annotated_genes":["SJAG_02621","SJAG_01836"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103912,114267],"is_not":false,"summary":null,"term":"GO:1990431"}]},"cv_name":"biological_process","definition":"The process of forming the mature 3' end of a priRNA molecule.","definition_xrefs":["PMID:24095277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA 3'-end processing","termid":"GO:0043628"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01836":null,"SJAG_02621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"priRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"priRNA 3' end processing","type":"exact"},{"name":"primal small RNA 3'-end processing","type":"exact"}],"termid":"GO:1990431","terms_by_termid":{"GO:1990431":null}}


id: GO:2000492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of interleukin-18-mediated signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"regulates","term_name":"interleukin-18-mediated signaling pathway","termid":"GO:0035655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-18-mediated signaling pathway","synonyms":[{"name":"regulation of interleukin-18-mediated signalling pathway","type":"exact"}],"termid":"GO:2000492"}


id: GO:0047490
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a pectin = an oligosaccharide with 4-deoxy-6-O-methyl-alpha-D-galact-4-enuronate end + a pectin. This reaction is the eliminative cleavage of (1->4)-alpha-D-galacturonan methyl ester to give oligosaccharides with 4-deoxy-6-O-methyl-alpha-D-galact-4-enuronosyl groups at their nonreducing ends.","definition_xrefs":["EC:4.2.2.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pectin lyase activity","secondary_identifiers":["MetaCyc:RXN-19781"],"synonyms":[{"name":"(1->4)-6-O-methyl-alpha-D-galacturonan lyase activity","type":"related"},{"name":"PL activity","type":"related"},{"name":"PMGL activity","type":"related"},{"name":"PNL activity","type":"related"},{"name":"endo-pectin lyase activity","type":"related"},{"name":"pectin methyltranseliminase activity","type":"related"},{"name":"pectin trans-eliminase activity","type":"broad"},{"name":"pectolyase activity","type":"related"},{"name":"polymethylgalacturonic transeliminase activity","type":"related"}],"termid":"GO:0047490"}


id: PBO:0030031
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_adenylyl_cyclase_activity","termid":"PBO:0030031"}


id: PBO:0031215
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_oxidation_during_vegetative_growth","termid":"PBO:0031215"}


id: PBO:0034228
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-fasciculates_with","termid":"PBO:0034228"}


id: PBO:0005342
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.33","termid":"PBO:0005342"}


id: GO:0051175
data:
  {"annotated_genes":["SJAG_02380","SJAG_01187"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107517,111644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving sulfur or compounds containing sulfur.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"negatively_regulates","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01187":null,"SJAG_02380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"negatively_regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"negative regulation of sulfur metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of sulfur metabolic process","type":"exact"},{"name":"down-regulation of sulfur metabolic process","type":"exact"},{"name":"downregulation of sulfur metabolic process","type":"exact"},{"name":"inhibition of sulfur metabolic process","type":"narrow"},{"name":"negative regulation of sulfur metabolism","type":"exact"},{"name":"negative regulation of sulphur metabolic process","type":"exact"},{"name":"negative regulation of sulphur metabolism","type":"exact"}],"termid":"GO:0051175","terms_by_termid":{"GO:2001211":null}}


id: PBO:0087728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Set3 complex; complex is a meiotic-specific repressor of sporulation specific genes that contains deacetylase activity; potential Cdc28p substrate","termid":"PBO:0087728"}


id: PBO:0081685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF606 antisense RNA 1","termid":"PBO:0081685"}


id: PATO:0001241
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality which inheres in a continuant.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quality","termid":"PATO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"physical object quality","secondary_identifiers":["PATO:0001238","snap:Quality","PATO:0001237"],"synonyms":[{"name":"monadic quality of a continuant","type":"exact"},{"name":"monadic quality of an object","type":"narrow"},{"name":"monadic quality of continuant","type":"narrow"},{"name":"multiply inhering quality of a physical entity ","type":"exact"},{"name":"quality of a continuant","type":"exact"},{"name":"quality of a single physical entity","type":"exact"},{"name":"quality of an object","type":"exact"},{"name":"quality of continuant","type":"exact"}],"termid":"PATO:0001241"}


id: GO:0043527
data:
  {"annotated_genes":["SJAG_04680","SJAG_04848","SJAG_02386","SJAG_04181","SJAG_02637","SJAG_04890"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[108299,97052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031515"},{"annotations":[100252,92273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043528"},{"annotations":[111878,115165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106143"}]},"cv_name":"cellular_component","definition":"A multimeric protein complex involved in the methylation of specific nucleotides in tRNA.","definition_xrefs":["GOC:jl","PMID:24904644","PMID:9851972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase complex","termid":"GO:0034708"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02386":null,"SJAG_02637":null,"SJAG_04181":null,"SJAG_04680":null,"SJAG_04848":null,"SJAG_04890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"tRNA methyltransferase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043527","terms_by_termid":{"GO:0031515":null,"GO:0043528":null,"GO:0106143":null}}


id: PBO:0109456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Meu34, human ZNRF3 homolog","termid":"PBO:0109456"}


id: FYPO:0001890
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115564,115566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"},{"annotations":[115565,115567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004573"}],"single_locus_phenotype":[{"annotations":[115552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is higher than normal. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level","termid":"FYPO:0000824"},{"relation_name":"is_a","term_name":"increased level of substance in cell","termid":"FYPO:0000990"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03118","SJAG_02621","SJAG_03689"],"name":"increased RNA level","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"RNA accumulation: increased","type":"related"},{"name":"increased RNA accumulation","type":"related"},{"name":"increased cellular RNA level","type":"exact"},{"name":"increased cellular mRNA level","type":"narrow"},{"name":"increased transcript level","type":"exact"}],"termid":"FYPO:0001890","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004573":null,"FYPO:0004982":null}}


id: PBO:0090275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin complex subunit, dynamitin Jnm1","termid":"PBO:0090275"}


id: PBO:0064003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 37","termid":"PBO:0064003"}


id: GO:0099556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse, via the release and reception of carbon monoxide molecules, that modulates the synaptic transmission properties of the synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling by carbon monoxide","termid":"GO:0099549"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by soluble gas, modulating synaptic transmission","termid":"GO:0099554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"trans-synaptic signaling by carbon monoxide, modulating synaptic transmission","termid":"GO:0099556"}


id: PBO:0015681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial 3'-tRNA processing endonuclease tRNAse Z, Trz2","termid":"PBO:0015681"}


id: GO:0018291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of molybdenum into an iron-sulfur cluster.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster assembly","termid":"GO:0016226"},{"relation_name":"is_a","term_name":"molybdenum incorporation into metallo-sulfur cluster","termid":"GO:0018289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016226"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0016226"],"is_obsolete":false,"name":"molybdenum incorporation into iron-sulfur cluster","synonyms":[{"name":"molybdenum incorporation into iron-sulphur cluster","type":"exact"}],"termid":"GO:0018291"}


id: PBO:0004228
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.27.9","termid":"PBO:0004228"}


id: PBO:0055513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2947","termid":"PBO:0055513"}


id: GO:0085033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that initiates, promotes, or enhances a host NF-kappaB-mediated signaling cascade. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:21098302","PMID:11907233","PMID:21199955","PMID:7845680","PMID:31311877","PMID:17490702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated activation of host signal transduction pathway","termid":"GO:0052028"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host NF-kappaB cascade","termid":"GO:0085032"},{"relation_name":"positively_regulates","term_name":"canonical NF-kappaB signal transduction","termid":"GO:0007249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated activation of host NF-kappaB cascade","secondary_identifiers":["VZ:841"],"synonyms":[{"name":"activation by symbiont of host I-kappaB kinase/NF-kappaB cascade","type":"exact"},{"name":"induction by symbiont of host I-kappaB kinase/NF-kappaB cascade","type":"exact"},{"name":"induction of host I-kappaB kinase/NF-kappaB cascade","type":"exact"},{"name":"induction of host canonical NF-kappaB signal transduction","type":"exact"},{"name":"positive regulation by symbiont of host I-kappaB kinase/NF-kappaB cascade","type":"exact"},{"name":"positive regulation by symbiont of host NF-kappaB-mediated signal transduction pathway","type":"exact"},{"name":"stimulation by symbiont of host I-kappaB kinase/NF-kappaB cascade","type":"exact"},{"name":"symbiont-mediated activation of host NF-kappaB signal transduction","type":"exact"},{"name":"symbiont-mediated activation of host canonical NF-kappaB signal transduction","type":"related"},{"name":"up regulation by symbiont of host I-kappaB kinase/NF-kappaB cascade","type":"exact"},{"name":"up-regulation by symbiont of host I-kappaB kinase/NF-kappaB cascade","type":"exact"},{"name":"upregulation by symbiont of host I-kappaB kinase/NF-kappaB cascade","type":"exact"}],"termid":"GO:0085033"}


id: PBO:0048537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem nuclear organelle associated protein 8 pseudogene 3","termid":"PBO:0048537"}


id: GO:2000128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of octopamine signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of octopamine or tyramine signaling pathway","termid":"GO:2000125"},{"relation_name":"regulates","term_name":"octopamine signaling pathway","termid":"GO:0071927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of octopamine signaling pathway","synonyms":[{"name":"regulation of octopamine signalling pathway","type":"exact"}],"termid":"GO:2000128"}


id: GO:0043796
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glyceraldehyde + H2O + NADP+ = D-glycerate + NADPH + H+.","definition_xrefs":["RHEA:40163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NADP+) activity","termid":"GO:0033721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glyceraldehyde dehydrogenase (NADP+) activity","secondary_identifiers":["EC:1.2.1.89"],"synonyms":[{"name":"glyceraldehyde dehydrogenase (NADP) activity","type":"exact"}],"termid":"GO:0043796"}


id: PBO:0081270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 34","termid":"PBO:0081270"}


id: PBO:0030918
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cortex_morphology_during_vegetative_growth","termid":"PBO:0030918"}


id: PBO:0059574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 2A","termid":"PBO:0059574"}


id: GO:0033709
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabinitol + NADP+ = D-ribulose + NADPH + H+.","definition_xrefs":["EC:1.1.1.287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"D-arabinitol dehydrogenase, D-ribulose forming (NADP+) activity","secondary_identifiers":["RHEA:11868","KEGG_REACTION:R07144","MetaCyc:RXN-7972"],"synonyms":[{"name":"ARD1p","type":"related"},{"name":"D-arabinitol dehydrogenase 1 activity","type":"broad"},{"name":"D-arabinitol:NADP+ dehydrogenase activity","type":"broad"},{"name":"NADP+-dependent D-arabinitol dehydrogenase activity","type":"broad"}],"termid":"GO:0033709"}


id: PBO:0001858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucan synthase subunit Bgs2","termid":"PBO:0001858"}


id: GO:0006780
data:
  {"annotated_genes":["SJAG_05283"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92433],"is_not":false,"summary":null,"term":"GO:0006780"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of uroporphyrinogen III.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin-containing compound biosynthetic process","termid":"GO:0006779"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"uroporphyrinogen III metabolic process","termid":"GO:0046502"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0033013","GO:0044281"],"is_obsolete":false,"name":"uroporphyrinogen III biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"uroporphyrinogen III anabolism","type":"exact"},{"name":"uroporphyrinogen III biosynthesis","type":"exact"},{"name":"uroporphyrinogen III formation","type":"exact"},{"name":"uroporphyrinogen III synthesis","type":"exact"}],"termid":"GO:0006780","terms_by_termid":{"GO:0006780":null}}


id: GO:0006253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dCTP, deoxycytidine triphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside triphosphate catabolic process","termid":"GO:0009213"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide catabolic process","termid":"GO:0009223"},{"relation_name":"is_a","term_name":"dCTP metabolic process","termid":"GO:0046065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dCTP catabolic process","synonyms":[{"name":"dCTP breakdown","type":"exact"},{"name":"dCTP catabolism","type":"exact"},{"name":"dCTP degradation","type":"exact"}],"termid":"GO:0006253"}


id: PBO:0073579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shisa like 1","termid":"PBO:0073579"}


id: PBO:0072403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 8","termid":"PBO:0072403"}


id: FYPO:0004670
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which macroautophagy is abnormal when the cell is subject to nitrogen starvation. Macroautophagy is the major pathway by which cells digest parts of their own cytoplasm.","definition_xrefs":["GO:0016236","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal macroautophagy","termid":"FYPO:0000163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal macroautophagy during nitrogen starvation","synonyms":[{"name":"abnormal macroautophagy during cellular response to nitrogen starvation","type":"exact"},{"name":"abnormal macroautophagy during nitrogen depletion","type":"exact"},{"name":"abnormal macroautophagy during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0004670"}


id: FYPO:0000488
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which reciprocal meiotic recombination is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process","termid":"FYPO:0002496"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal meiotic recombination","synonyms":[{"name":"meiotic recombination: normal","type":"related"}],"termid":"FYPO:0000488"}


id: PBO:0111868
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-ZZ type","termid":"PBO:0111868"}


id: PR:G2TRJ9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- coa3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRJ9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor 3, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.21","synonyms":[{"name":"Spom972h-coa3","type":"exact"},{"name":"transcripts altered in meiosis protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:G2TRJ9"}


id: GO:0140586
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Bridging together a cis-regulatory element and a terminator DNA sequences on the chromatin, holding two loop anchors together, maintaining a chromatin loop.","definition_xrefs":["PMID:19933151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin loop anchoring activity","termid":"GO:0140587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0060090","GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"promoter-terminator loop anchoring activity","synonyms":[{"name":"terminator-promoter loop anchoring activity","type":"exact"}],"termid":"GO:0140586"}


id: GO:0016966
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + 2 ferricytochrome c + nitrous oxide = 2 H+ + 2 ferrocytochrome c + 2 nitric oxide.","definition_xrefs":["EC:1.7.2.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor","termid":"GO:0016662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"nitric oxide reductase activity","secondary_identifiers":["GO:0016967","KEGG_REACTION:R00294","GO:0016968","RHEA:30211","MetaCyc:NITRIC-OXIDE-REDUCTASE-RXN"],"synonyms":[{"name":"CYP55","type":"narrow"},{"name":"P450 nitric oxide reductase activity","type":"narrow"},{"name":"P450nor","type":"narrow"},{"name":"cytochrome bc nitric oxide reductase activity","type":"narrow"},{"name":"nitric-oxide reductase activity","type":"related"},{"name":"nitrogen oxide reductase activity","type":"related"},{"name":"nitrous-oxide:(acceptor) oxidoreductase (NO-forming)","type":"related"},{"name":"nitrous-oxide:acceptor oxidoreductase (NO-forming)","type":"related"}],"termid":"GO:0016966"}


id: GO:0035522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of the ubiquitin group from a monoubiquitinated histone H2A protein.","definition_xrefs":["PMID:18226187","GOC:bf","PMID:20436459"],"gene_count":0,"genotype_count":0,"name":"obsolete monoubiquitinated histone H2A deubiquitination (obsolete GO:0035522)","synonyms":[{"name":"monoubiquitinated histone H2A deubiquitinylation","type":"exact"},{"name":"monoubiquitinated histone H2A deubiquitylation","type":"exact"}],"termid":"GO:0035522"}


id: PBO:0044353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 40","termid":"PBO:0044353"}


id: GO:0070877
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds to heme and to pri-miRNAs, and is required for the formation of a pre-microRNA (pre-miRNA), the initial step of microRNA (miRNA) biogenesis. The complex is composed of the double-stranded-RNA-specific RNase Drosha (also called RNASEN) and the RNA-binding protein DGCR8 (heme-free or heme-bound forms). Within the complex, DGCR8 function as a molecular anchor necessary for the recognition of pri-miRNA at dsRNA-ssRNA junction and directs RNASEN/Drosha to cleave the 3' and 5' strands of a stem-loop to release hairpin-shaped pre-miRNAs.","definition_xrefs":["PMID:16963499","PMID:17159994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"ribonuclease III complex","termid":"GO:1903095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"microprocessor complex","termid":"GO:0070877"}


id: FYPO:0006428
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the stable attachment of sister chromatids to microtubules emanating from opposite poles of the mitotic spindle during metaphase plate congression is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"normal attachment of spindle microtubules to kinetochore","termid":"FYPO:0003570"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal mitotic sister chromatid biorientation","synonyms":[{"name":"normal sister chromatid biorientation during mitosis","type":"exact"},{"name":"normal sister chromatid biorientation during mitotic cell cycle","type":"related"},{"name":"normal sister chromatid biorientation during vegetative growth","type":"exact"}],"termid":"FYPO:0006428"}


id: PBO:0088089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose pyrophosphorylase (UGPase); catalyses the reversible formation of UDP-Glc from glucose 1-phosphate and UTP, involved in a wide variety of metabolic pathways, expression modulated by Pho85p through Pho4p; involved in PKA-mediated oxidative stress resistance and long-term survival in stationary phase; UGP1 has a paralog, YHL012W, that arose from the whole genome duplication","termid":"PBO:0088089"}


id: GO:1990674
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding any of the thin, flattened compartments that form the cis portion of the Golgi complex.","definition_xrefs":["PMID:24119662","GOC:bhm","PMID:16038056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi cisterna membrane","termid":"GO:0032580"},{"relation_name":"part_of","term_name":"Golgi cis cisterna","termid":"GO:0000137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005794"],"is_obsolete":false,"name":"Golgi cis cisterna membrane","synonyms":[{"name":"Golgi apparatus cis cisterna membrane","type":"exact"},{"name":"cis-Golgi cisterna membrane","type":"exact"}],"termid":"GO:1990674"}


id: GO:0097394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The synthesis of telomeric repeat-containing RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II promoter.","definition_xrefs":["GOC:al","PMID:22139915"],"gene_count":0,"genotype_count":0,"name":"obsolete telomeric repeat-containing RNA transcription by RNA polymerase II (obsolete GO:0097394)","synonyms":[{"name":"TERRA RNA transcription from RNA pol II promoter","type":"related"},{"name":"telomeric RNA transcription from Pol II promoter","type":"related"},{"name":"telomeric repeat-containing RNA transcription from RNA pol II promoter","type":"exact"}],"termid":"GO:0097394"}


id: GO:0050386
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-carbamoyl-L-aspartate + H2O + 2 H+ = L-aspartate + CO2 + NH4.","definition_xrefs":["RHEA:14365","EC:3.5.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"ureidosuccinase activity","secondary_identifiers":["MetaCyc:UREIDOSUCCINASE-RXN","KEGG_REACTION:R00484"],"synonyms":[{"name":"N-carbamoyl-L-aspartate amidohydrolase activity","type":"related"}],"termid":"GO:0050386"}


id: GO:0006840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of alpha-ketoglutarate and malate into, out of or within a mitochondrion.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial alpha-ketoglutarate/malate transport (obsolete GO:0006840)","synonyms":[{"name":"mitochondrial alpha-ketoglutarate/malate transport","type":"exact"},{"name":"mitochondrial oxoglutarate/malate transport","type":"exact"}],"termid":"GO:0006840"}


id: PBO:0040744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCS1 homolog, ubiquinol-cytochrome c reductase complex chaperone","termid":"PBO:0040744"}


id: PR:000028949
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thioredoxin oxidized form in Schizosaccharomyces pombe. The disulfide bond involves Cys-30 and Cys-33 in UniProtKB:O14463.","definition_xrefs":["PMID:22245228","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trx1/Ox+","pombase_gene_id":"SPAC7D4.07c","synonyms":[{"name":"PomBase_original_PRO_term_name: thioredoxin-1 oxidized form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-TXN/Ox+","type":"exact"},{"name":"trx1/Ox+","type":"exact"}],"termid":"PR:000028949"}


id: PBO:0042862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 92 (putative)","termid":"PBO:0042862"}


id: PBO:0034036
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pubmed_citation","termid":"PBO:0034036"}


id: GO:0044715
data:
  {"annotated_genes":["SJAG_03362"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95607],"is_not":false,"summary":null,"term":"GO:0044715"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction 8-oxo-dGDP + H2O = 8-oxo-dGMP + phosphate.","definition_xrefs":["RHEA:32063","GOC:pde","PMID:22556419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate phosphatase activity","termid":"GO:0017110"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03362":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"8-oxo-dGDP phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2395879","Reactome:R-HSA-2395876","EC:3.6.1.58"],"termid":"GO:0044715","terms_by_termid":{"GO:0044715":null}}


id: GO:1900917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of octadecene metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"is_a","term_name":"regulation of olefin metabolic process","termid":"GO:1900908"},{"relation_name":"regulates","term_name":"octadecene metabolic process","termid":"GO:1900681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of octadecene metabolic process","synonyms":[{"name":"regulation of octadecene metabolism","type":"exact"}],"termid":"GO:1900917"}


id: PBO:0027551
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K14_acetylation_at_telomere","termid":"PBO:0027551"}


id: PBO:0085520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S21, no bacterial homolog; RPS21B has a paralog, RPS21A, that arose from the whole genome duplication","termid":"PBO:0085520"}


id: PBO:0111952
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-NF-X1 zinc finger","termid":"PBO:0111952"}


id: PR:O14174
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spt20 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit spt20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.10c","synonyms":[{"name":"Spom972h-spt20","type":"exact"}],"termid":"PR:O14174"}


id: GO:0051355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events contributing to equilibrioception by which an organism senses the position, location, orientation, and movement of the body and its parts. Proprioception plays an important role in the ability of an organism to perceive its orientation with respect to gravity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proprioception","termid":"GO:0019230"},{"relation_name":"part_of","term_name":"equilibrioception","termid":"GO:0050957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proprioception involved in equilibrioception","synonyms":[{"name":"equilibrioception by proprioception","type":"exact"},{"name":"perception of orientation with respect to gravity by proprioception","type":"exact"},{"name":"proprioception during equilibrioception","type":"related"}],"termid":"GO:0051355"}


id: PBO:0028362
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiseptate_cell_in_stationary_phase","termid":"PBO:0028362"}


id: PBO:0085091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear exosome-associated RNA binding protein; involved in surveillance of pre-rRNAs and pre-mRNAs, and the degradation of cryptic non-coding RNAs (ncRNA); copurifies with ribosomes; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0085091"}


id: PR:O94268
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nop2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"25S rRNA (cytosine-C(5))-methyltransferase nop2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.20c","synonyms":[{"name":"Spom972h-nop2","type":"exact"},{"name":"nucleolar protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94268"}


id: GO:0038166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by angiotensin II binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:signaling","PMID:10977869","GOC:nhn","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"},{"relation_name":"part_of","term_name":"cellular response to angiotensin","termid":"GO:1904385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"angiotensin-activated signaling pathway","synonyms":[{"name":"angiotensin II-mediated signaling pathway","type":"exact"},{"name":"angiotensin receptor signaling pathway","type":"exact"},{"name":"angiotensin-mediated signaling pathway","type":"related"}],"termid":"GO:0038166"}


id: GO:0002093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that alters the size or shape of an auditory receptor cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"cell morphogenesis involved in neuron differentiation","termid":"GO:0048667"},{"relation_name":"part_of","term_name":"inner ear morphogenesis","termid":"GO:0042472"},{"relation_name":"part_of","term_name":"auditory receptor cell development","termid":"GO:0060117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"auditory receptor cell morphogenesis","synonyms":[{"name":"hair cell morphogenesis","type":"broad"}],"termid":"GO:0002093"}


id: PBO:0004002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Spb4 (predicted)","termid":"PBO:0004002"}


id: PBO:0041173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B and T lymphocyte associated","termid":"PBO:0041173"}


id: GO:0045039
data:
  {"annotated_genes":["SJAG_02398","SJAG_00404","SJAG_00687","SJAG_01120","SJAG_03502","SJAG_02524","SJAG_01640","SJAG_03515","SJAG_01949","SJAG_04208","SJAG_04996"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84691,86421,88813,95510,99029,103421,103640,103698,103720,109354,112441],"is_not":false,"summary":null,"term":"GO:0045039"}]},"cv_name":"biological_process","definition":"The processes mediating the insertion of proteins into the mitochondrial inner membrane. Mitochondrial inner membrane proteins can get inserted from the cytosol, by crossing the outer membrane and being guided by an inner membrane translocase complex into their final destination in the inner membrane. Some proteins present in the intermembrane space can get inserted into the inner mitochondrial membrane. Finally, some proteins are inserted into the inner membrane from the matrix side of the membrane.","definition_xrefs":["GOC:mcc","PMID:18672008","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial transport","termid":"GO:0006839"},{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"is_a","term_name":"inner mitochondrial membrane organization","termid":"GO:0007007"},{"relation_name":"is_a","term_name":"establishment of protein localization to mitochondrial membrane","termid":"GO:0090151"},{"relation_name":"part_of","term_name":"protein targeting to mitochondrion","termid":"GO:0006626"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00404":null,"SJAG_00687":null,"SJAG_01120":null,"SJAG_01640":null,"SJAG_01949":null,"SJAG_02398":null,"SJAG_02524":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_04208":null,"SJAG_04996":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006605"}],"interesting_parent_ids":["GO:0006810","GO:0007005","GO:0051179","GO:0061024","GO:0008150","GO:0006605"],"is_obsolete":false,"name":"protein insertion into mitochondrial inner membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial inner membrane protein import","type":"exact"},{"name":"protein import into mitochondrial inner membrane","type":"exact"},{"name":"protein transport into mitochondrial inner membrane","type":"exact"}],"termid":"GO:0045039","terms_by_termid":{"GO:0045039":null}}


id: GO:0099535
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The extracellular matrix of the perisynaptic space (the extracellular space adjacent to the synapse) and the synaptic cleft.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen-containing extracellular matrix","termid":"GO:0062023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"synapse-associated extracellular matrix","synonyms":[{"name":"extra-synaptic extracellular matrix","type":"exact"}],"termid":"GO:0099535"}


id: PBO:0111755
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat protein","termid":"PBO:0111755"}


id: GO:0015130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of mevalonate from one side of a membrane to the other. Mevalonate is the anion of mevalonic acid; its (R)-enantiomer is a strategic intermediate derived from hydroxymethylglutaryl-CoA in the biosynthesis of polyprenyl compounds.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"mevalonate transmembrane transporter activity","synonyms":[{"name":"monocarboxylate (lactate, pyruvate, mevalonate) uptake/efflux porter activity","type":"related"}],"termid":"GO:0015130"}


id: PBO:0061937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily M member 4 pseudogene","termid":"PBO:0061937"}


id: FYECO:0000028
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which TBC was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000028 + TBC (obsolete FYECO:0000028)","termid":"FYECO:0000028"}


id: PBO:0048357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 68","termid":"PBO:0048357"}


id: GO:0034328
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a decanoyl (CH3-[CH2]8-CO-) group to an acceptor molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"decanoyltransferase activity","termid":"GO:0034328"}


id: GO:0060940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where an epicardial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell that will mature into a cardiac fibroblast.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac epithelial to mesenchymal transition","termid":"GO:0060317"},{"relation_name":"part_of","term_name":"epicardium-derived cardiac fibroblast cell development","termid":"GO:0060939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial to mesenchymal transition involved in cardiac fibroblast development","termid":"GO:0060940"}


id: PBO:0061432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 1 group H member 5, pseudogene","termid":"PBO:0061432"}


id: FYPO:0001763
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which tRNA methylation, the posttranscriptional addition of methyl groups to specific residues in a tRNA molecule, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0030488","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal tRNA modification","termid":"FYPO:0001762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal tRNA methylation","synonyms":[{"name":"normal tRNA methylation during mitotic cell cycle","type":"related"},{"name":"normal tRNA methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0001763"}


id: GO:0006107
data:
  {"annotated_genes":["SJAG_00714","SJAG_02276","SJAG_00493"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90996,102894],"is_not":false,"summary":null,"term":"GO:0006107"},{"annotations":[107963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019266"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving oxaloacetate, the anion of oxobutanedioic acid, an important intermediate in metabolism, especially as a component of the TCA cycle.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00493":null,"SJAG_00714":null,"SJAG_02276":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"oxaloacetate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"oxaloacetate metabolism","type":"exact"}],"termid":"GO:0006107","terms_by_termid":{"GO:0006107":null,"GO:0019266":null}}


id: GO:0015783
data:
  {"annotated_genes":["SJAG_01960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036085"}]},"cv_name":"biological_process","definition":"The directed movement of GDP-fucose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GDP-fucose is a substance composed of fucose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide-sugar transmembrane transport","termid":"GO:0090480"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"GDP-fucose transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GDP-fucose transport","type":"related"}],"termid":"GO:0015783","terms_by_termid":{"GO:0036085":null}}


id: PBO:0061222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar and coiled-body phosphoprotein 1","termid":"PBO:0061222"}


id: PBO:0027448
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_bleomycin","termid":"PBO:0027448"}


id: GO:0048079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment of a pattern of pigment in the cuticle of an organism.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental pigmentation","termid":"GO:0048070"},{"relation_name":"regulates","term_name":"cuticle pigmentation","termid":"GO:0048067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cuticle pigmentation","termid":"GO:0048079"}


id: PR:Q9UT97
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit alpha type-5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01621","PRO:DNx","PANTHER:PTHR11599:SF14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha type-5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC323.02c","secondary_identifiers":["UniProtKB:Q9UT97"],"synonyms":[{"name":"Spom972h-PSMA5","type":"exact"}],"termid":"PR:Q9UT97"}


id: PBO:0062427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 87 pseudogene","termid":"PBO:0062427"}


id: PBO:0053312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA, p53 induced transcript","termid":"PBO:0053312"}


id: GO:0140268
data:
  {"annotated_genes":["SJAG_01329","SJAG_04413","SJAG_03170","SJAG_03247","SJAG_01168","SJAG_02613","SJAG_01564"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87504,93521,100487,102439,107811,113706,114852],"is_not":false,"summary":null,"term":"GO:0140268"}]},"cv_name":"cellular_component","definition":"A contact site between the endoplasmic reticulum membrane and the plasma membrane, structured by bridging complexes.","definition_xrefs":["PMID:27955928","PMID:30012696","PMID:29290560","PMID:23041194","PMID:29782498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane contact site","termid":"GO:0044232"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01168":null,"SJAG_01329":null,"SJAG_01564":null,"SJAG_02613":null,"SJAG_03170":null,"SJAG_03247":null,"SJAG_04413":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"endoplasmic reticulum-plasma membrane contact site","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"EPCS","type":"exact"},{"name":"ER-PM contact site","type":"exact"},{"name":"ER-plasma membrane contact site","type":"exact"},{"name":"endoplasmic reticulum-plasma membrane contact junction","type":"exact"}],"termid":"GO:0140268","terms_by_termid":{"GO:0140268":null}}


id: SO:0001700
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Histone modification is a post translationally modified region whereby residues of the histone protein are modified by methylation, acetylation, phosphorylation, ubiquitination, sumoylation, citrullination, or ADP-ribosylation.","direct_ancestors":[{"relation_name":"has_quality","term_name":"epigenetically_modified","termid":"SO:0000133"},{"relation_name":"is_a","term_name":"post_translationally_modified_region","termid":"SO:0001089"},{"relation_name":"is_a","term_name":"epigenetically_modified_region","termid":"SO:0001720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"histone_modification","synonyms":[{"name":"histone modification","type":"exact"},{"name":"histone modification site","type":"related"}],"termid":"SO:0001700"}


id: PATO:0000151
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000151 relative texture (obsolete PATO:0000151)","termid":"PATO:0000151"}


id: FYPO:0002206
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which none of the cells in a population of spores are viable, and all have a larger volume than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal. Inviable spores do not germinate.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable swollen spore population (obsolete FYPO:0002206)","synonyms":[{"name":"inviable enlarged spore population","type":"related"},{"name":"inviable large spore population","type":"related"},{"name":"inviable population of swollen spores","type":"exact"},{"name":"inviable spore population with increased cell size","type":"related"},{"name":"inviable spore population with increased cell volume","type":"exact"}],"termid":"FYPO:0002206"}


id: GO:0015430
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + glycerol-3-phosphate(out) = ADP + phosphate + glycerol-3-phosphate(in).","definition_xrefs":["RHEA:21668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol-3-phosphate transmembrane transporter activity","termid":"GO:0015169"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ABC-type glycerol-3-phosphate transporter activity","secondary_identifiers":["GO:0070812","GO:0015610","EC:7.6.2.10","MetaCyc:ABC-34-RXN"],"synonyms":[{"name":"ABC-type glycerol 3-phosphate transporter","type":"exact"},{"name":"ATP-dependent glycerol-2-phosphate transmembrane transporter activity","type":"narrow"},{"name":"ATPase-coupled glycerol-2-phosphate transmembrane transporter activity","type":"narrow"},{"name":"ATPase-coupled glycerol-3-phosphate transmembrane transporter activity","type":"related"},{"name":"glycerol phosphate-importing ATPase activity","type":"narrow"},{"name":"glycerol-2-phosphate-transporting ATPase activity","type":"narrow"},{"name":"glycerol-3-phosphate ABC transporter","type":"exact"},{"name":"glycerol-3-phosphate-transporting ATPase","type":"related"},{"name":"glycerol-phosphate porter activity","type":"narrow"}],"termid":"GO:0015430"}


id: PBO:0042337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD69 molecule","termid":"PBO:0042337"}


id: PR:O59676
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59676"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain-containing protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.13","synonyms":[{"name":"Spom972h-pdp1","type":"exact"},{"name":"set9-associated factor pdp1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59676"}


id: GO:0060764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another and contributes to the progression of the mammary gland, from its initial state to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"},{"relation_name":"part_of","term_name":"mammary gland development","termid":"GO:0030879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cell-cell signaling involved in mammary gland development","synonyms":[{"name":"cell-cell signalling involved in mammary gland development","type":"exact"}],"termid":"GO:0060764"}


id: PBO:0005111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrin","termid":"PBO:0005111"}


id: GO:0051567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of one or more methyl groups to lysine at position 9 of the histone.","definition_xrefs":["GOC:ai","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K9 methylation (obsolete GO:0051567)","synonyms":[{"name":"histone H3 K9 methylation","type":"exact"},{"name":"histone H3K9me","type":"exact"},{"name":"histone lysine H3 K9 methylation","type":"exact"}],"termid":"GO:0051567"}


id: GO:1903025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of RNA polymerase II regulatory region sequence-specific DNA binding.","definition_xrefs":["GOC:krc","PMID:20026326","GOC:dph","GOC:TermGenie","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription regulatory region DNA binding","termid":"GO:2000677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of RNA polymerase II regulatory region sequence-specific DNA binding","termid":"GO:1903025"}


id: PBO:0030630
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_maltose_carbon_source","termid":"PBO:0030630"}


id: PBO:0003295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1 adaptor complex subunit beta subunit Apl2","termid":"PBO:0003295"}


id: GO:1902868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of retina development in camera-type eye.","definition_xrefs":["GOC:TermGenie","PMID:16872597","GOC:mr","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of retina development in camera-type eye","termid":"GO:1902866"},{"relation_name":"positively_regulates","term_name":"retina development in camera-type eye","termid":"GO:0060041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of retina development in camera-type eye","synonyms":[{"name":"activation of retina development in camera-style eye","type":"narrow"},{"name":"activation of retina development in camera-type eye","type":"narrow"},{"name":"activation of retinal development","type":"related"},{"name":"positive regulation of retina development in camera-style eye","type":"exact"},{"name":"positive regulation of retinal development","type":"related"},{"name":"up regulation of retina development in camera-style eye","type":"exact"},{"name":"up regulation of retina development in camera-type eye","type":"exact"},{"name":"up regulation of retinal development","type":"related"},{"name":"up-regulation of retina development in camera-style eye","type":"exact"},{"name":"up-regulation of retina development in camera-type eye","type":"exact"},{"name":"up-regulation of retinal development","type":"related"},{"name":"upregulation of retina development in camera-style eye","type":"exact"},{"name":"upregulation of retina development in camera-type eye","type":"exact"},{"name":"upregulation of retinal development","type":"related"}],"termid":"GO:1902868"}


id: PBO:0072733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine-1-phosphate receptor 3","termid":"PBO:0072733"}


id: PBO:0063434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE4DIP pseudogene 8","termid":"PBO:0063434"}


id: PBO:0049862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatocellular carcinoma up-regulated EZH2-associated long non-coding RNA","termid":"PBO:0049862"}


id: PBO:0067349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 446, pseudogene","termid":"PBO:0067349"}


id: PBO:0082465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calcium-binding component of the spindle pole body (SPB) half-bridge; required for SPB duplication in mitosis and meiosis II; homolog of mammalian centrin; binds multiubiquitinated proteins and is involved in proteasomal protein degradation","termid":"PBO:0082465"}


id: GO:0160046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: chloride(out) + oxalate(in) = chloride(in) + oxalate(out).","definition_xrefs":["PMID:17442754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:inorganic anion antiporter activity","termid":"GO:0005452"},{"relation_name":"is_a","term_name":"chloride transmembrane transporter activity","termid":"GO:0015108"},{"relation_name":"is_a","term_name":"oxalate transmembrane transporter activity","termid":"GO:0019531"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"oxalate:chloride antiporter activity","termid":"GO:0160046"}


id: GO:1902294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA replication termination that is involved in cell cycle DNA replication.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication termination","termid":"GO:0006274"},{"relation_name":"part_of","term_name":"cell cycle DNA replication","termid":"GO:0044786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0006259","GO:0006260","GO:0008150"],"is_obsolete":false,"name":"cell cycle DNA replication termination","synonyms":[{"name":"DNA replication termination involved in cell cycle DNA replication","type":"exact"}],"termid":"GO:1902294"}


id: PBO:0086708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; member of the PIR (Proteins with Internal Repeats) family of cell wall proteins; SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, and mCherry fusion localizes to the vacuole; non-essential gene that is required for sporulation; mRNA is weakly cell cycle regulated, peaking in mitosis; YJL160C has a paralog, PIR1, that arose from the whole genome duplication","termid":"PBO:0086708"}


id: PBO:0029072
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleus,_with_protein_mislocalized_to_cytoplasm","termid":"PBO:0029072"}


id: PBO:0058846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8075","termid":"PBO:0058846"}


id: PR:O60117
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16G5.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein C16G5.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.03","synonyms":[{"name":"Spom972h-SPBC16G5.03","type":"exact"}],"termid":"PR:O60117"}


id: GO:0000338
data:
  {"annotated_genes":["SJAG_00720","SJAG_03733","SJAG_05977","SJAG_03325","SJAG_04011","SJAG_02341","SJAG_02764","SJAG_00795","SJAG_00776","SJAG_04948"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85670,87477,88915,89033,91344,97397,101407,102606,105127,106471],"is_not":false,"summary":null,"term":"GO:0000338"}]},"cv_name":"biological_process","definition":"The removal of a ubiquitin-like protein of the NEDD8 type from a protein.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification by small protein removal","termid":"GO:0070646"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00720":null,"SJAG_00776":null,"SJAG_00795":null,"SJAG_02341":null,"SJAG_02764":null,"SJAG_03325":null,"SJAG_03733":null,"SJAG_04011":null,"SJAG_04948":null,"SJAG_05977":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"protein deneddylation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0010388"],"synonyms":[{"name":"cullin deneddylation","type":"narrow"}],"termid":"GO:0000338","terms_by_termid":{"GO:0000338":null}}


id: PBO:0088861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1/TPR repeat protein, protein kinase inhibitor Nif1","termid":"PBO:0088861"}


id: PBO:0045801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelin receptor type B","termid":"PBO:0045801"}


id: GO:0090213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of radial pattern formation, the regionalization process that results in defined areas around a point in which specific types of cell differentiation will occur.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"radial pattern formation","termid":"GO:0009956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of radial pattern formation","synonyms":[{"name":"regulation of radial pattern specification","type":"narrow"}],"termid":"GO:0090213"}


id: PBO:0030773
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_hydroxyurea","termid":"PBO:0030773"}


id: PBO:0005612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor EF-1 beta subunit (eEF1B)","termid":"PBO:0005612"}


id: MOD:01732
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Proteome Sciences TMT6plex-127 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent N-acylated residue","termid":"MOD:01717"},{"relation_name":"is_a","term_name":"TMT6plex-127 reporter+balance reagent acylated residue","termid":"MOD:01728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-127 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01732"}


id: PBO:0028490
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-separate_mitotic_half_spindles_present","termid":"PBO:0028490"}


id: PBO:0081327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 121","termid":"PBO:0081327"}


id: PR:Q9P3T9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bsd1 gene.","definition_xrefs":["UniProtKB:Q9P3T9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal homeostasis protein bsd1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC328.07c","synonyms":[{"name":"Spom972h-bsd1","type":"exact"}],"termid":"PR:Q9P3T9"}


id: PBO:0072741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A6","termid":"PBO:0072741"}


id: GO:0046108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving uridine, uracil riboside, a ribonucleoside very widely distributed but occurring almost entirely as phosphoric esters in ribonucleotides and ribonucleic acids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside metabolic process","termid":"GO:0046131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"uridine metabolic process","synonyms":[{"name":"uridine metabolism","type":"exact"}],"termid":"GO:0046108"}


id: PBO:0089703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrimidine 5'-nucleotidase","termid":"PBO:0089703"}


id: GO:0097361
data:
  {"annotated_genes":["SJAG_00040","SJAG_02895","SJAG_02866","SJAG_02497"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83676,84999,96112,110919],"is_not":false,"summary":null,"term":"GO:0097361"}]},"cv_name":"cellular_component","definition":"A protein complex capable of condensing two 2Fe-2S clusters into one 4Fe-4S center in the cytoplasm and nucleus. In humans it consists of MMS19, CIAO1, CIAO2A/CIAO2B, CIAO3. MMS19, CIAO1 and CIAO2A/CIAO2B form a tight 'core' complex, whereas CIAO3 is an 'external' component of this complex.","definition_xrefs":["PMID:34660592","PMID:23585563","PMID:23891004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"iron-sulfur cluster assembly complex","termid":"GO:1990229"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00040":null,"SJAG_02497":null,"SJAG_02866":null,"SJAG_02895":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737","GO:0005829"],"is_obsolete":false,"name":"cytosolic [4Fe-4S] assembly targeting complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CIA complex","type":"broad"},{"name":"CIA targeting complex","type":"exact"},{"name":"cytosolic iron-sulfur protein assembly complex","type":"related"}],"termid":"GO:0097361","terms_by_termid":{"GO:0097361":null}}


id: PBO:0065737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PX domain containing serine/threonine kinase like","termid":"PBO:0065737"}


id: PBO:0074597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 9B","termid":"PBO:0074597"}


id: GO:0140865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-22 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:34755534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"interleukin-22-mediated signaling pathway","synonyms":[{"name":"IL-22-mediated signaling pathway","type":"exact"},{"name":"interleukin-22-mediated signalling pathway","type":"exact"}],"termid":"GO:0140865"}


id: GO:0090169
data:
  {"annotated_genes":["SJAG_02332","SJAG_04464"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"},{"annotations":[107157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901673"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of spindle assembly. Spindle assembly is the aggregation, arrangement and bonding together of a set of components to form the spindle, the array of microtubules and associated molecules that serves to move duplicated chromosomes apart.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spindle organization","termid":"GO:0090224"},{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"spindle assembly","termid":"GO:0051225"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02332":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000226","GO:0008150","GO:0044085","GO:0007010","GO:0007049"],"is_obsolete":false,"name":"regulation of spindle assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of spindle formation","type":"exact"}],"termid":"GO:0090169","terms_by_termid":{"GO:0110161":null,"GO:1901673":null}}


id: PBO:0110064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RQT complex subunit Rqt4","termid":"PBO:0110064"}


id: GO:0034287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a monosaccharide is received and converted into a molecular signal.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of carbohydrate stimulus","termid":"GO:0009730"},{"relation_name":"is_a","term_name":"response to monosaccharide","termid":"GO:0034284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of monosaccharide stimulus","synonyms":[{"name":"perception of monosaccharide stimulus","type":"related"}],"termid":"GO:0034287"}


id: GO:0090110
data:
  {"annotated_genes":["SJAG_02349","SJAG_00072","SJAG_03153","SJAG_03558","SJAG_02539","SJAG_05345","SJAG_05344"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70462,74001,89393,106345,108127,108867,112769],"is_not":false,"summary":null,"term":"GO:0090110"}]},"cv_name":"biological_process","definition":"The formation of a macromolecular complex between the COPII coat proteins and proteins and/or lipoproteins that are going to be transported by the COPII vesicle to the Golgi.","definition_xrefs":["GOC:tb","GOC:lb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle cargo loading","termid":"GO:0035459"},{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"},{"relation_name":"part_of","term_name":"COPII-coated vesicle budding","termid":"GO:0090114"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_02349":null,"SJAG_02539":null,"SJAG_03153":null,"SJAG_03558":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0016192","GO:0061024"],"is_obsolete":false,"name":"COPII-coated vesicle cargo loading","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"COPII coat-cargo complex assembly","type":"related"},{"name":"cargo loading into COPII vesicle","type":"exact"},{"name":"cargo loading into COPII-coated vesicle","type":"exact"},{"name":"cargo selection into COPII-coated vesicle","type":"exact"}],"termid":"GO:0090110","terms_by_termid":{"GO:0090110":null}}


id: GO:0061881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increasesthe frequency, rate or extent of the directed movement of mitochondria along microtubules in axons away from the cell body and towards the presynapse.","definition_xrefs":["PMID:24302729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"is_a","term_name":"regulation of anterograde axonal transport of mitochondrion","termid":"GO:0061880"},{"relation_name":"positively_regulates","term_name":"anterograde axonal transport of mitochondrion","termid":"GO:0098957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of anterograde axonal transport of mitochondrion","synonyms":[{"name":"positive regulation of anterograde axon transport of mitochondria","type":"exact"}],"termid":"GO:0061881"}


id: GO:1905393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the plant organ. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:tb","GO_REF:0000081","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant organ formation","termid":"GO:1905393"}


id: GO:1902381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 11-oxo-beta-amyrin.","definition_xrefs":["GOC:TermGenie","PMID:22128119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentacyclic triterpenoid metabolic process","termid":"GO:0019742"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"11-oxo-beta-amyrin metabolic process","synonyms":[{"name":"11-oxo-beta-amyrin metabolism","type":"exact"}],"termid":"GO:1902381"}


id: PBO:0001743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial fusion and transport protein Ugo1 (predicted)","termid":"PBO:0001743"}


id: GO:0034478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phosphatidylglycerols, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of glycerol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylglycerol metabolic process","termid":"GO:0046471"},{"relation_name":"is_a","term_name":"glycerophospholipid catabolic process","termid":"GO:0046475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006629"],"is_obsolete":false,"name":"phosphatidylglycerol catabolic process","synonyms":[{"name":"phosphatidylglycerol breakdown","type":"exact"},{"name":"phosphatidylglycerol catabolism","type":"exact"},{"name":"phosphatidylglycerol degradation","type":"exact"}],"termid":"GO:0034478"}


id: GO:0034368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acquisition, loss or modification of a protein or lipid within a protein-lipid complex.","definition_xrefs":["GOC:BHF","GOC:mah","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex remodeling","termid":"GO:0034367"},{"relation_name":"is_a","term_name":"protein-lipid complex organization","termid":"GO:0071825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-lipid complex remodeling","synonyms":[{"name":"protein-lipid complex remodelling","type":"exact"}],"termid":"GO:0034368"}


id: PBO:0044125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 11, pseudogene","termid":"PBO:0044125"}


id: PBO:0085406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane protein, putative ammonium transporter; regulation pattern suggests a possible role in export of ammonia from the cell; phosphorylated in mitochondria; member of the TC 9.B.33 YaaH family of putative transporters","termid":"PBO:0085406"}


id: PBO:0085968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; potential Cdc28p substrate; overproduction confers resistance to methylmercury","termid":"PBO:0085968"}


id: PBO:0053491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 469","termid":"PBO:0053491"}


id: GO:0090356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways involving auxins, plant hormones that regulate aspects of plant growth.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"negative regulation of hormone metabolic process","termid":"GO:0032351"},{"relation_name":"is_a","term_name":"regulation of auxin metabolic process","termid":"GO:0090354"},{"relation_name":"negatively_regulates","term_name":"auxin metabolic process","termid":"GO:0009850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of auxin metabolic process","synonyms":[{"name":"negative regulation of auxin metabolism","type":"exact"}],"termid":"GO:0090356"}


id: GO:0005948
data:
  {"annotated_genes":["SJAG_06635","SJAG_03985"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99397,109407],"is_not":false,"summary":null,"term":"GO:0005948"}]},"cv_name":"cellular_component","definition":"A dimeric (a large and a small chain) or tetrameric (two large and two small chains) enzyme complex. Catalyzes the formation of acetolactate from pyruvate.","definition_xrefs":["PMID:8756689","PMID:16458324","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03985":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"acetolactate synthase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"acetohydroxyacid synthase complex","type":"exact"}],"termid":"GO:0005948","terms_by_termid":{"GO:0005948":null}}


id: PBO:0082607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Co-chaperone that binds and regulates Hsp90 family chaperones; plays a role in determining prion variants; important for pp60v-src activity in yeast; homologous to the mammalian p23 proteins, and like p23 can regulate telomerase activity; protein abundance increases in response to DNA replication stress","termid":"PBO:0082607"}


id: GO:0050240
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + pyrogallol = (Z)-5-oxohex-2-enedioate + 2 H+.","definition_xrefs":["RHEA:19673","EC:1.13.11.35"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"pyrogallol 1,2-oxygenase activity","secondary_identifiers":["MetaCyc:PYROGALLOL-12-OXYGENASE-RXN","KEGG_REACTION:R03246"],"synonyms":[{"name":"1,2,3-trihydroxybenzene:oxygen 1,2-oxidoreductase (decyclizing)","type":"related"},{"name":"pyrogallol 1,2-dioxygenase activity","type":"related"}],"termid":"GO:0050240"}


id: FYPO:0006976
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell during the meiotic cell cycle is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level","termid":"FYPO:0000840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal RNA level during meiotic cell cycle","synonyms":[{"name":"normal RNA accumulation during meiotic cell cycle","type":"related"},{"name":"normal cellular RNA level during meiotic cell cycle","type":"exact"},{"name":"normal mRNA level during meiotic cell cycle","type":"narrow"},{"name":"normal transcript level during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0006976"}


id: PBO:0047317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAT atypical cadherin 1 pseudogene 1","termid":"PBO:0047317"}


id: PBO:0052184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 16","termid":"PBO:0052184"}


id: GO:0070744
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is composed of an interleukin-27p28 subunit (product of the IL27 gene) and an EBI3 subunit and is secreted into the extracellular space.","definition_xrefs":["GOC:add","PMID:15999093","PMID:19161428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0032991","GO:0005576","GO:0005575"],"is_obsolete":false,"name":"interleukin-27 complex","synonyms":[{"name":"EBI3","type":"narrow"},{"name":"IL-27 complex","type":"exact"},{"name":"IL27","type":"narrow"},{"name":"p28","type":"narrow"}],"termid":"GO:0070744"}


id: PBO:0059272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L35 pseudogene 1","termid":"PBO:0059272"}


id: FYPO:0003040
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of RNA splicing is decreased. All RNA splicing may be increased, or splicing of one or more specific RNA molecules may be selectively affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA splicing","termid":"FYPO:0002915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000294","FYPO:0006551"],"is_obsolete":false,"name":"decreased RNA splicing","synonyms":[{"name":"decreased RNA splicing during mitotic cell cycle","type":"related"},{"name":"decreased RNA splicing during vegetative growth","type":"exact"},{"name":"decreased RNA splicing, via transesterification reactions with bulged adenosine as nucleophile","type":"exact"},{"name":"reduced RNA splicing","type":"exact"}],"termid":"FYPO:0003040"}


id: GO:0007229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to an integrin on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"integrin-mediated signaling pathway","synonyms":[{"name":"integrin-mediated signalling pathway","type":"exact"}],"termid":"GO:0007229"}


id: PBO:0011181
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curator","termid":"PBO:0011181"}


id: PBO:0113397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative regulatory subunit of Nem1p-Spo7p phosphatase holoenzyme; regulates nuclear/ER membrane association and activation of Pah1p, a phosphatidate phosphatase involved in the production of diacylglycerol DAG for lipid droplet biogenesis; phosphatase activity of the Nem1p-Spo7p complex is inhibited by Ice2p; regulates nuclear growth by controlling phospholipid biosynthesis; required for normal nuclear envelope morphology, premeiotic replication, and sporulation","termid":"PBO:0113397"}


id: PR:O14121
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nde2 gene.","definition_xrefs":["UniProtKB:O14121","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-ubiquinone oxidoreductase C3A11.07, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.07","synonyms":[{"name":"Spom972h-nde2","type":"exact"}],"termid":"PR:O14121"}


id: PBO:0108909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1191 pseudogene 3","termid":"PBO:0108909"}


id: GO:0045801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chitin-based cuticular tanning.","definition_xrefs":["GOC:mtg_sensu","GOC:go_curators","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chitin-based cuticle tanning","termid":"GO:0007564"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"chitin-based cuticle sclerotization","termid":"GO:0007593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chitin-based cuticle tanning","synonyms":[{"name":"activation of cuticle tanning","type":"narrow"},{"name":"positive regulation of cuticle hardening","type":"narrow"},{"name":"positive regulation of cuticle tanning","type":"exact"},{"name":"stimulation of cuticle tanning","type":"narrow"},{"name":"up regulation of cuticle tanning","type":"exact"},{"name":"up-regulation of cuticle tanning","type":"exact"},{"name":"upregulation of cuticle tanning","type":"exact"}],"termid":"GO:0045801"}


id: GO:0102398
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + dTDP-3-amino-4-dehydro-2,3,6-trideoxy-alpha-D-glucose = S-adenosyl-L-homocysteine + dTDP-3-N-methylamino-4-oxo-2,3,6-trideoxy-alpha-D-glucose + H+.","definition_xrefs":["EC:2.1.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"dTDP-3-amino-4-oxo-2,3,6-trideoxy-alpha-D-glucose N-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13657"],"termid":"GO:0102398"}


id: PR:O13911
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A bifunctional polynucleotide phosphatase/kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12083:SF5","OMA:SCHPO00882","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bifunctional polynucleotide phosphatase/kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.04c","secondary_identifiers":["UniProtKB:O13911"],"synonyms":[{"name":"DNA 5'-kinase/3'-phosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PNKP","type":"exact"},{"name":"polynucleotide kinase-3'-phosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13911"}


id: GO:0103062
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP(4-) + H2O + a cis-keto-C60-meroacyl-[acp] = diphosphoric acid + a cis-keto-meroacyl-adenylate + a holo-[acyl-carrier protein].","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cis-keto-C60-meroacyl-AMP ligase activity (obsolete GO:0103062)","termid":"GO:0103062"}


id: GO:0010893
data:
  {"annotated_genes":["SJAG_04018"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid metabolic process","termid":"GO:0045940"},{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"is_a","term_name":"regulation of steroid biosynthetic process","termid":"GO:0050810"},{"relation_name":"positively_regulates","term_name":"steroid biosynthetic process","termid":"GO:0006694"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of steroid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010893","terms_by_termid":{"GO:0070452":null}}


id: PBO:0034227
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-serially_homologous_to","termid":"PBO:0034227"}


id: FYPO:0006260
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the formation of chromatin knobs in subtelomeric regions does not occur. Chromatin knobs are highly condensed chromatin bodies formed from subtelomeric heterochromatin (observed on chromosomes 1 and 2).","definition_xrefs":["PomBase:mah","PMID:26804021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin organization during vegetative growth","termid":"FYPO:0004543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"abolished subtelomeric chromatin knob formation","synonyms":[{"name":"abolished subtelomeric chromatin condensation","type":"broad"},{"name":"abolished subtelomeric chromatin knob assembly","type":"exact"},{"name":"knob-containing nuclei absent","type":"related"},{"name":"subtelomeric chromatin knob formation abolished","type":"exact"}],"termid":"FYPO:0006260"}


id: PBO:0038532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 6, acylglycerol lipase","termid":"PBO:0038532"}


id: GO:0042318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any antibiotic that contains the condensed beta-lactamthiazolidine ring system.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-lactam antibiotic biosynthetic process","termid":"GO:0030654"},{"relation_name":"is_a","term_name":"penicillin metabolic process","termid":"GO:0042316"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"penicillin biosynthetic process","synonyms":[{"name":"penicillin anabolism","type":"exact"},{"name":"penicillin biosynthesis","type":"exact"},{"name":"penicillin formation","type":"exact"},{"name":"penicillin synthesis","type":"exact"}],"termid":"GO:0042318"}


id: PBO:0111886
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KASH domain protein","termid":"PBO:0111886"}


id: GO:0005656
data:
  {"annotated_genes":["SJAG_01267","SJAG_04062","SJAG_01762","SJAG_00857","SJAG_02348","SJAG_00884","SJAG_05301","SJAG_03927","SJAG_04210","SJAG_02607","SJAG_03451","SJAG_01354","SJAG_02800","SJAG_02394","SJAG_02074"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84817,87979,93391,99423,102535,103369,103962,104178,106355,106696,107528,107790,109331,111264,111436],"is_not":false,"summary":null,"term":"GO:0005656"}]},"cv_name":"cellular_component","definition":"A protein-DNA complex assembled at eukaryotic DNA replication origins during late mitosis and G1, allowing the origin to become competent, or 'licensed', for replication. The complex normally includes the origin recognition complex (ORC), Cdc6, Cdt1 and the MiniChromosome Maintenance (Mcm2-7) proteins.","definition_xrefs":["PMID:15222894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-replicative complex","termid":"GO:0036387"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nucleoplasm","termid":"GO:0005654"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00857":null,"SJAG_00884":null,"SJAG_01267":null,"SJAG_01354":null,"SJAG_01762":null,"SJAG_02074":null,"SJAG_02348":null,"SJAG_02394":null,"SJAG_02607":null,"SJAG_02800":null,"SJAG_03451":null,"SJAG_03927":null,"SJAG_04062":null,"SJAG_04210":null,"SJAG_05301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0005654","GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"nuclear pre-replicative complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"eukaryotic pre-replicative complex","type":"exact"},{"name":"pre-RC","type":"related"},{"name":"pre-replicative complex","type":"broad"}],"termid":"GO:0005656","terms_by_termid":{"GO:0005656":null}}


id: GO:0003785
data:
  {"annotated_genes":["SJAG_04982","SJAG_01993"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71102,74621],"is_not":false,"summary":null,"term":"GO:0003785"}]},"cv_name":"molecular_function","definition":"Binding to monomeric actin, also known as G-actin.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin binding","termid":"GO:0003779"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01993":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003779"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0008092","GO:0005515","GO:0003779","GO:0005488"],"is_obsolete":false,"name":"actin monomer binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"G actin binding","type":"exact"}],"termid":"GO:0003785","terms_by_termid":{"GO:0003785":null}}


id: PBO:0090860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface adhesion protein for conjugation","termid":"PBO:0090860"}


id: GO:1902991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of amyloid precursor protein catabolic process.","definition_xrefs":["GOC:PARL","GOC:rl","GOC:TermGenie","PMID:24499793","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"regulates","term_name":"amyloid precursor protein catabolic process","termid":"GO:0042987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amyloid precursor protein catabolic process","synonyms":[{"name":"regulation of APP catabolic process","type":"exact"},{"name":"regulation of APP catabolism","type":"exact"},{"name":"regulation of amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of amyloid precursor protein degradation","type":"exact"}],"termid":"GO:1902991"}


id: PBO:0011132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, adhesion molecule (predicted), DUF1773 family protein 6","termid":"PBO:0011132"}


id: GO:0034108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of erythrocyte clearance.","definition_xrefs":["GOC:add","PMID:12905029","PMID:14754397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune system process","termid":"GO:0002684"},{"relation_name":"is_a","term_name":"positive regulation of tissue remodeling","termid":"GO:0034105"},{"relation_name":"is_a","term_name":"regulation of erythrocyte clearance","termid":"GO:0034106"},{"relation_name":"positively_regulates","term_name":"erythrocyte clearance","termid":"GO:0034102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of erythrocyte clearance","synonyms":[{"name":"positive regulation of RBC clearance","type":"exact"},{"name":"positive regulation of neocytolysis","type":"narrow"},{"name":"positive regulation of red blood cell clearance","type":"exact"}],"termid":"GO:0034108"}


id: PBO:0073249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 2 pseudogene 1","termid":"PBO:0073249"}


id: SO:0001109
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of three residues within a beta-sheet consisting of two H-bonds in which: the main-chain NH of residue(i) is H-bonded to the main-chain CO of residue(i+4), the main-chain CO of residue i is H-bonded to the main-chain NH of residue(i+3), these loops have an RL nest at residues i+2 and i+3.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_bulge_loop","termid":"SO:0001108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_bulge_loop_five","secondary_identifiers":["BS:00210"],"synonyms":[{"name":"beta bulge loop five","type":"exact"}],"termid":"SO:0001109"}


id: GO:1905482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any cytoplasmic sequestering of protein that is involved in G2 DNA damage checkpoint.","definition_xrefs":["GO_REF:0000060","PMID:10523629","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic sequestering of protein involved in G2 DNA damage checkpoint (obsolete GO:1905482)","termid":"GO:1905482"}


id: GO:0002044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of endothelial cells into the extracellular matrix in order to form new blood vessels during intussusceptive angiogenesis.","definition_xrefs":["PMID:16391003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel endothelial cell migration","termid":"GO:0043534"},{"relation_name":"part_of","term_name":"intussusceptive angiogenesis","termid":"GO:0002041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood vessel endothelial cell migration involved in intussusceptive angiogenesis","termid":"GO:0002044"}


id: GO:0046828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of movement of RNA from the cytoplasm to the nucleus.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound transport","termid":"GO:0032239"},{"relation_name":"is_a","term_name":"regulation of nucleocytoplasmic transport","termid":"GO:0046822"},{"relation_name":"regulates","term_name":"RNA import into nucleus","termid":"GO:0006404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0006913"],"is_obsolete":false,"name":"regulation of RNA import into nucleus","synonyms":[{"name":"regulation of RNA import into cell nucleus","type":"exact"},{"name":"regulation of RNA transport from cytoplasm to nucleus","type":"exact"},{"name":"regulation of RNA-nucleus import","type":"exact"}],"termid":"GO:0046828"}


id: PBO:0071765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P1 pseudogene 12","termid":"PBO:0071765"}


id: PBO:0055064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2480","termid":"PBO:0055064"}


id: PBO:0042634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 9 pseudogene","termid":"PBO:0042634"}


id: GO:0000107
data:
  {"annotated_genes":["SJAG_03775"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106554],"is_not":false,"summary":null,"term":"GO:0000107"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphoribulosylformimino-AICAR-P + L-glutamine = D-erythro-imidazole-glycerol-phosphate + aminoimidazole carboxamide ribonucleotide + L-glutamate + 2 H+.","definition_xrefs":["RHEA:24793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03775":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"imidazoleglycerol-phosphate synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GLUTAMIDOTRANS-RXN"],"synonyms":[{"name":"glutamine amidotransferase:cyclase activity","type":"broad"},{"name":"imidazole glycerol phosphate synthase activity","type":"exact"},{"name":"imidazole-glycerol-phosphate synthase activity","type":"related"},{"name":"imidazoleglycerol phosphate synthase activity","type":"exact"}],"termid":"GO:0000107","terms_by_termid":{"GO:0000107":null}}


id: PBO:0031112
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-pleiotropic_effects_(obsolete_FYPO:0000261)","termid":"PBO:0031112"}


id: PBO:0012848
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.8.4.12","termid":"PBO:0012848"}


id: PBO:0041017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BPI fold containing family A member 4, pseudogene","termid":"PBO:0041017"}


id: GO:0051679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 6-alpha-maltosylglucose, also known as isopanose.","definition_xrefs":["GOC:ai","LIGAND:C03367","PubChem_Compound:439991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"6-alpha-maltosylglucose metabolic process","synonyms":[{"name":"6-alpha-maltosylglucose metabolism","type":"exact"},{"name":"isopanose metabolic process","type":"exact"},{"name":"isopanose metabolism","type":"exact"}],"termid":"GO:0051679"}


id: PBO:0025542
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair-deficiency disorder","termid":"PBO:0025542"}


id: PBO:0052876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 8-1","termid":"PBO:0052876"}


id: PBO:0077305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 44","termid":"PBO:0077305"}


id: GO:0005780
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the intraperoxisomal membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"peroxisomal membrane","termid":"GO:0005778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005777"}],"interesting_parent_ids":["GO:0005575","GO:0005777","GO:0005737"],"is_obsolete":false,"name":"extrinsic component of intraperoxisomal membrane","synonyms":[{"name":"extrinsic to intraperoxisomal membrane","type":"exact"},{"name":"intra-peroxisomal peripheral membrane","type":"related"}],"termid":"GO:0005780"}


id: PBO:0012044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homocitrate synthase","termid":"PBO:0012044"}


id: GO:0030947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vascular endothelial growth factor receptor signaling pathway activity.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of cellular response to growth factor stimulus","termid":"GO:0090287"},{"relation_name":"regulates","term_name":"vascular endothelial growth factor receptor signaling pathway","termid":"GO:0048010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of vascular endothelial growth factor receptor signaling pathway","synonyms":[{"name":"regulation of VEGF receptor signaling pathway","type":"exact"},{"name":"regulation of VEGF receptor signalling pathway","type":"exact"},{"name":"regulation of vascular endothelial growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0030947"}


id: PBO:0057955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3678","termid":"PBO:0057955"}


id: GO:0106405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the dephosphorylation of isoprenoid diphosphates.","definition_xrefs":["PMID:33246356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"isoprenoid diphosphate phosphatase activity","termid":"GO:0106405"}


id: PBO:0001728
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High Osmolarity Sensitive","termid":"PBO:0001728"}


id: GO:0035907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the dorsal aorta over time, from its initial formation to the mature structure. The dorsal aorta is a blood vessel in a single-pass circulatory system that carries oxygenated blood from the gills to the rest of the body. In a single-pass circulatory system blood passes once through the heart to supply the body once.","definition_xrefs":["ZFA:0000014","GOC:bf","Wikipedia:Aorta","GOC:dgh","UBERON:0005805"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aorta development","termid":"GO:0035904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal aorta development","termid":"GO:0035907"}


id: PBO:0004948
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translocase of the Inner Membrane","termid":"PBO:0004948"}


id: PBO:0088370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, Atf-CREB family Atf1","termid":"PBO:0088370"}


id: GO:1901003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fermentation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"regulation of fermentation","termid":"GO:0043465"},{"relation_name":"negatively_regulates","term_name":"fermentation","termid":"GO:0006113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"negative regulation of fermentation","synonyms":[{"name":"down regulation of fermentation","type":"exact"},{"name":"down-regulation of fermentation","type":"exact"},{"name":"downregulation of fermentation","type":"exact"},{"name":"inhibition of fermentation","type":"narrow"}],"termid":"GO:1901003"}


id: PBO:0044601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DCAF8 divergent transcript","termid":"PBO:0044601"}


id: PBO:0067685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal 2","termid":"PBO:0067685"}


id: GO:0120067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within gastric smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the narrowest part of the pylorus that separates the stomach from the duodenum.","definition_xrefs":["GOC:sl","PMID:15890336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stomach pylorus smooth muscle contraction","termid":"GO:0120064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pyloric sphincter smooth muscle contraction","termid":"GO:0120067"}


id: PBO:0060752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B3 pseudogene 2","termid":"PBO:0060752"}


id: PBO:0041001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BOP1 ribosomal biogenesis factor","termid":"PBO:0041001"}


id: GO:1904412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac ventricle development.","definition_xrefs":["GOC:TermGenie","PMID:19590510","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"cardiac ventricle development","termid":"GO:0003231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac ventricle development","termid":"GO:1904412"}


id: PBO:0075623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SREBF pathway regulator in golgi 1","termid":"PBO:0075623"}


id: PBO:0041585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 22 open reading frame 46, pseudogene","termid":"PBO:0041585"}


id: PBO:0026745
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_glucose_starvation","termid":"PBO:0026745"}


id: FYPO:0005585
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more triglycerides measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular triglyceride level during vegetative growth","synonyms":[{"name":"decreased cellular TAG level during vegetative growth","type":"exact"},{"name":"decreased cellular triacylglycerol level during vegetative growth","type":"exact"},{"name":"decreased cellular triglyceride level during mitotic cell cycle","type":"related"},{"name":"decreased triglyceride accumulation during vegetative growth","type":"related"},{"name":"reduced cellular triglyceride level during vegetative growth","type":"exact"}],"termid":"FYPO:0005585"}


id: GO:1901858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitochondrial DNA metabolic process.","definition_xrefs":["GOC:yaf","PMID:23150719","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"regulates","term_name":"mitochondrial DNA metabolic process","termid":"GO:0032042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of mitochondrial DNA metabolic process","synonyms":[{"name":"regulation of mitochondrial DNA metabolism","type":"exact"},{"name":"regulation of mtDNA metabolic process","type":"exact"},{"name":"regulation of mtDNA metabolism","type":"exact"}],"termid":"GO:1901858"}


id: FYPO:0007948
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a spore is longer than normal, is multinucleate and multiseptate.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated spore","termid":"FYPO:0001123"},{"relation_name":"is_a","term_name":"elongated multinucleate cell","termid":"FYPO:0003342"},{"relation_name":"is_a","term_name":"multinucleate multiseptate cell","termid":"FYPO:0005277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"elongated multinucleate multiseptate spore","termid":"FYPO:0007948"}


id: GO:0072206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the juxtaglomerular apparatus in the metanephros over time, from its formation to the mature structure. The juxtaglomerular apparatus is an anatomical structure which consists of juxtaglomerular cells, extraglomerular mesangial cells and the macula densa. The juxtaglomerular apparatus lies adjacent to the glomerulus and regulates kidney function by maintaining the blood flow to the kidney and the filtration rate.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juxtaglomerular apparatus development","termid":"GO:0072051"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric juxtaglomerular apparatus development","termid":"GO:0072206"}


id: GO:0018500
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: trans-9R,10R-dihydrodiolphenanthrene + NAD+ = NADH + H+ + 9,10-dihydroxyphenanthrene.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-9R,10R-dihydrodiolphenanthrene dehydrogenase activity (obsolete GO:0018500)","termid":"GO:0018500"}


id: GO:0031829
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 4 serotonin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type 4 serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 4 receptor binding","type":"exact"},{"name":"type 4 serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031829"}


id: PBO:0048222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate decarboxylase family member 3, pseudogene","termid":"PBO:0048222"}


id: GO:0002582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antigen processing and presentation of antigen (peptide or polysaccharide) via MHC class II.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation","termid":"GO:0002579"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002580"},{"relation_name":"positively_regulates","term_name":"antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","synonyms":[{"name":"activation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","type":"narrow"},{"name":"positive regulation of peptide or polysaccharide antigen processing and presentation via MHC class II","type":"exact"},{"name":"stimulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","type":"narrow"},{"name":"up regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","type":"exact"},{"name":"up-regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","type":"exact"},{"name":"upregulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","type":"exact"}],"termid":"GO:0002582"}


id: FYPO:0007267
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the endoplasmic reticulum (ER) colocalizes with eisosomes to a greater extent than normal.","definition_xrefs":["PMID:32023460","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cortical endoplasmic reticulum organization","termid":"FYPO:0007571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased colocalization of cortical endoplasmic reticulum with eisosomes","synonyms":[{"name":"increased colocalization of cortical ER with eisosomes","type":"exact"},{"name":"increased colocalization of cortical endoplasmic reticulum with eisosomes during mitotic cell cycle","type":"related"},{"name":"increased colocalization of cortical endoplasmic reticulum with eisosomes during vegetative growth","type":"exact"},{"name":"increased colocalization of tubular cortical ER with eisosomes","type":"exact"},{"name":"increased cortical ER-eisosome colocalization","type":"exact"}],"termid":"FYPO:0007267"}


id: GO:2000685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to X-ray.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of cellular response to X-ray","termid":"GO:2000683"},{"relation_name":"positively_regulates","term_name":"cellular response to X-ray","termid":"GO:0071481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to X-ray","synonyms":[{"name":"positive regulation of cellular response to X-ray radiation stimulus","type":"exact"}],"termid":"GO:2000685"}


id: PBO:0035806
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H4-K16_acetylation_at_boundary_element_IRC1L_during_vegetative_growth","termid":"PBO:0035806"}


id: PBO:0004876
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.3.1.70","termid":"PBO:0004876"}


id: PBO:0073685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sirtuin 7","termid":"PBO:0073685"}


id: GO:0004587
data:
  {"annotated_genes":["SJAG_00495"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102891],"is_not":false,"summary":null,"term":"GO:0004587"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2-oxocarboxylate + L-ornithine = an L-alpha-amino acid + L-glutamate 5-semialdehyde.","definition_xrefs":["EC:2.6.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016769","GO:0003674"],"is_obsolete":false,"name":"ornithine aminotransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-70654","MetaCyc:ORNITHINE--OXO-ACID-AMINOTRANSFERASE-RXN","Reactome:R-HSA-70666","RHEA:13877"],"synonyms":[{"name":"GabT","type":"related"},{"name":"L-ornithine 5-aminotransferase activity","type":"related"},{"name":"L-ornithine aminotransferase activity","type":"related"},{"name":"L-ornithine:2-oxo-acid aminotransferase activity","type":"related"},{"name":"L-ornithine:alpha-ketoglutarate delta-aminotransferase activity","type":"related"},{"name":"OAT","type":"related"},{"name":"ornithine 5-aminotransferase activity","type":"related"},{"name":"ornithine delta-transaminase activity","type":"related"},{"name":"ornithine ketoacid aminotransferase activity","type":"related"},{"name":"ornithine transaminase activity","type":"related"},{"name":"ornithine(lysine) transaminase activity","type":"related"},{"name":"ornithine--2-oxoacid aminotransferase activity","type":"related"},{"name":"ornithine--alpha-ketoglutarate aminotransferase activity","type":"related"},{"name":"ornithine--keto acid aminotransferase activity","type":"related"},{"name":"ornithine--keto acid transaminase activity","type":"related"},{"name":"ornithine--ketoglutarate aminotransferase activity","type":"related"},{"name":"ornithine--oxo acid aminotransferase activity","type":"related"},{"name":"ornithine--oxo-acid transaminase activity","type":"related"},{"name":"ornithine-oxo-acid aminotransferase activity","type":"exact"},{"name":"ornithine-oxo-acid transaminase activity","type":"related"},{"name":"ornithine:alpha-oxoglutarate transaminase activity","type":"related"}],"termid":"GO:0004587","terms_by_termid":{"GO:0004587":null}}


id: PBO:0062954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 like","termid":"PBO:0062954"}


id: PBO:0088609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose-2,6-bisphosphatase, human TIGAR ortholog","termid":"PBO:0088609"}


id: PBO:0031015
data:
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id: GO:0010485
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id: PBO:0039542
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id: FYPO:0002241
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id: PBO:0050553
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id: PBO:0000608
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id: GO:0120065
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id: SO:0001690
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id: GO:1990094
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id: GO:0043496
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id: GO:0061404
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id: PBO:0058051
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id: PBO:0082343
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id: PBO:0004720
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id: GO:0050350
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id: GO:0016874
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id: PBO:0080377
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS9 domain containing 1","termid":"PBO:0080377"}


id: GO:0006213
data:
  {"annotated_genes":["SJAG_00957","SJAG_00885","SJAG_03771","SJAG_03213","SJAG_05029","SJAG_04264","SJAG_00694","SJAG_01673"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101616,103391],"is_not":false,"summary":null,"term":"GO:0006213"},{"annotations":[85227,104508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009972"},{"annotations":[86684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046135"},{"annotations":[93806,109976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043097"},{"annotations":[108066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046132"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any pyrimidine nucleoside, one of a family of organic molecules consisting of a pyrimidine base covalently bonded to ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:jl","ISBN:0140512713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside metabolic process","termid":"GO:0009116"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound metabolic process","termid":"GO:0072527"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00694":null,"SJAG_00885":null,"SJAG_00957":null,"SJAG_01673":null,"SJAG_03213":null,"SJAG_03771":null,"SJAG_04264":null,"SJAG_05029":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"pyrimidine nucleoside metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine metabolic process","type":"broad"},{"name":"pyrimidine metabolism","type":"broad"},{"name":"pyrimidine nucleoside metabolism","type":"exact"}],"termid":"GO:0006213","terms_by_termid":{"GO:0006213":null,"GO:0009972":null,"GO:0043097":null,"GO:0046132":null,"GO:0046135":null}}


id: PBO:0040913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 17","termid":"PBO:0040913"}


id: PBO:0057237
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 424","termid":"PBO:0057237"}


id: GO:0002661
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of B cell tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction","termid":"GO:0002643"},{"relation_name":"regulates","term_name":"B cell tolerance induction","termid":"GO:0002514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of B cell tolerance induction","synonyms":[{"name":"regulation of B lymphocyte tolerance induction","type":"exact"},{"name":"regulation of B-cell tolerance induction","type":"exact"},{"name":"regulation of B-lymphocyte tolerance induction","type":"exact"}],"termid":"GO:0002661"}


id: PBO:0049681
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HuR (ELAVL1) associated fibroblast migratory lncRNA","termid":"PBO:0049681"}


id: FYPO:0005774
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of magnesium ions measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular magnesium level","synonyms":[{"name":"decreased cellular magnesium ion level","type":"exact"},{"name":"decreased cellular magnesium level during mitotic cell cycle","type":"related"},{"name":"decreased cellular magnesium level during vegetative growth","type":"exact"},{"name":"decreased magnesium accumulation","type":"related"},{"name":"reduced cellular magnesium level","type":"exact"}],"termid":"FYPO:0005774"}


id: PR:000036302
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A G2/mitotic-specific cyclin cdc13 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G2/mitotic-specific cyclin cdc13","termid":"PR:000037485"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2/mitotic-specific cyclin cdc13 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC582.03","synonyms":[{"name":"SPBC582.03","type":"related"},{"name":"Spom-cdc13","type":"exact"}],"termid":"PR:000036302"}


id: PBO:0057461
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 580","termid":"PBO:0057461"}


id: PBO:0055929
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A17, pseudogene","termid":"PBO:0055929"}


id: GO:0044819
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  {"annotated_genes":["SJAG_00169","SJAG_02026"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105808,87330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"}]},"cv_name":"biological_process","definition":"A cell cycle checkpoint that detects and negatively regulates progression from G1 to S phase as part of a mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle checkpoint signaling","termid":"GO:0007093"},{"relation_name":"is_a","term_name":"negative regulation of G1/S transition of mitotic cell cycle","termid":"GO:2000134"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_02026":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0044772"}],"interesting_parent_ids":["GO:0044772","GO:0008150","GO:0023052","GO:0007049"],"is_obsolete":false,"name":"mitotic G1/S transition checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitotic G1/S transition checkpoint","type":"exact"}],"termid":"GO:0044819","terms_by_termid":{"GO:0031571":null}}


id: GO:0004608
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  {"annotated_genes":["SJAG_00825"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103524],"is_not":false,"summary":null,"term":"GO:0004608"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + phosphatidylethanolamine = S-adenosyl-L-homocysteine + H+ + phosphatidyl-N-methylethanolamine.","definition_xrefs":["EC:2.1.1.17","RHEA:11164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00825":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"phosphatidylethanolamine N-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:2.1.1.17-RXN","Reactome:R-HSA-1483174","KEGG_REACTION:R02056"],"synonyms":[{"name":"LMTase activity","type":"related"},{"name":"PEMT","type":"related"},{"name":"S-adenosyl-L-methionine:phosphatidylethanolamine N-methyltransferase activity","type":"related"},{"name":"lipid methyl transferase activity","type":"related"},{"name":"phosphatidylethanolamine methyltransferase activity","type":"related"},{"name":"phosphatidylethanolamine-N-methylase activity","type":"related"},{"name":"phosphatidylethanolamine-S-adenosylmethionine methyltransferase activity","type":"related"}],"termid":"GO:0004608","terms_by_termid":{"GO:0004608":null}}


id: PBO:0002121
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"14-3-3 protein Rad25","termid":"PBO:0002121"}


id: PBO:0061230
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-POU domain containing, octamer-binding pseudogene 2","termid":"PBO:0061230"}


id: PBO:0005838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline dehydrogenase (predicted)","termid":"PBO:0005838"}


id: GO:0006734
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id: GO:0034413
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  {"annotated_genes":["SJAG_04666","SJAG_03587","SJAG_04771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90504],"is_not":false,"summary":null,"term":"GO:0034413"},{"annotations":[83556,88443],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140748"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds, found in the walls of ascospores.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ascospore wall (1->3)-beta-D-glucan metabolic process","termid":"GO:0034409"},{"relation_name":"is_a","term_name":"ascospore wall beta-glucan biosynthetic process","termid":"GO:0034412"},{"relation_name":"is_a","term_name":"fungal-type cell wall (1->3)-beta-D-glucan biosynthetic process","termid":"GO:0071970"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03587":null,"SJAG_04666":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0030437"}],"interesting_parent_ids":["GO:0030437","GO:0071554","GO:0008150","GO:0005975","GO:0044085","GO:0007049"],"is_obsolete":false,"name":"ascospore wall (1->3)-beta-D-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ascospore wall 1,3-beta-D-glucan biosynthetic process","type":"broad"},{"name":"ascospore wall 1,3-beta-glucan anabolism","type":"exact"},{"name":"ascospore wall 1,3-beta-glucan biosynthesis","type":"exact"},{"name":"ascospore wall 1,3-beta-glucan biosynthetic process","type":"broad"},{"name":"ascospore wall 1,3-beta-glucan formation","type":"exact"},{"name":"ascospore wall 1,3-beta-glucan synthesis","type":"exact"},{"name":"ascospore wall beta-1,3-glucan anabolism","type":"exact"},{"name":"ascospore wall beta-1,3-glucan biosynthesis","type":"exact"},{"name":"ascospore wall beta-1,3-glucan biosynthetic process","type":"exact"},{"name":"ascospore wall beta-1,3-glucan formation","type":"exact"},{"name":"ascospore wall beta-1,3-glucan synthesis","type":"exact"}],"termid":"GO:0034413","terms_by_termid":{"GO:0034413":null,"GO:0140748":null}}


id: PBO:0029148
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_methylenetetrahydrofolate_reductase_(NADPH)_activity","termid":"PBO:0029148"}


id: PBO:0079089
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 5-2","termid":"PBO:0079089"}


id: GO:0038146
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the chemokine CXCL12 to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:nhn","Wikipedia:Stromal_cell-derived_factor-1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine-mediated signaling pathway","termid":"GO:0070098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"chemokine (C-X-C motif) ligand 12 signaling pathway","synonyms":[{"name":"CXCL12 signaling pathway","type":"exact"},{"name":"CXCL12-activated CXCR7 signaling pathway","type":"narrow"},{"name":"SDF1 signaling pathway","type":"exact"},{"name":"stromal cell-derived factor-1 signaling pathway","type":"exact"}],"termid":"GO:0038146"}


id: GO:0006059
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  {"annotated_genes":["SJAG_00237"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006062"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving hexitols, any alditol with a chain of six carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alditol metabolic process","termid":"GO:0019400"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"hexitol metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"hexitol metabolism","type":"exact"},{"name":"sugar alcohol (hexitol) metabolic process","type":"exact"},{"name":"sugar alcohol (hexitol) metabolism","type":"exact"}],"termid":"GO:0006059","terms_by_termid":{"GO:0006062":null}}


id: PBO:0066878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 178","termid":"PBO:0066878"}


id: PBO:0085637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in incorporating iron-sulfur clusters into proteins; mitochondrial matrix protein; involved in the incorporation of iron-sulfur clusters into mitochondrial aconitase-type proteins; activates the radical-SAM family members Bio2p and Lip5p; interacts with Ccr4p in the two-hybrid system","termid":"PBO:0085637"}


id: PATO:0002112
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's having a hole or holes, especially a row or array of small holes.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure, cavities","termid":"PATO:0002014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perforate","secondary_identifiers":["PATO:0000649"],"synonyms":[{"name":"permeable","type":"related"},{"name":"pierced","type":"related"}],"termid":"PATO:0002112"}


id: SO:0001091
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Binding site for any chemical group (co-enzyme, prosthetic group, etc.).","definition_xrefs":["EBIBS:GAR"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001091 non_covalent_binding_site (obsolete SO:0001091)","synonyms":[{"name":"binding","type":"related"},{"name":"binding site","type":"related"},{"name":"non covalent binding site","type":"exact"}],"termid":"SO:0001091"}


id: PBO:0012543
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-acts_on_population_of","termid":"PBO:0012543"}


id: PBO:0054006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1335","termid":"PBO:0054006"}


id: PBO:0066229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 38","termid":"PBO:0066229"}


id: PR:Q10407
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mkh1 gene.","definition_xrefs":["UniProtKB:Q10407","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase kinase kinase mkh1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.02c","synonyms":[{"name":"Spom972h-mkh1","type":"exact"}],"termid":"PR:Q10407"}


id: PBO:0079138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 1","termid":"PBO:0079138"}


id: PBO:0085763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase of unknown cellular role; binds phosphatidylinositols and cardiolipin in a large-scale study","termid":"PBO:0085763"}


id: PBO:0039070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argonaute RISC catalytic component 2","termid":"PBO:0039070"}


id: PBO:0063118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(ADP-ribose) polymerase family member 4","termid":"PBO:0063118"}


id: GO:0033538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ajugose, the hexasaccharide beta-D-fructofuranosyl alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-glucopyranoside, by a pathway in which galactan:galactan galactosyltransferase catalyzes chain elongation by transferring the alpha-galactosyl residue of one raffinose-family oligosaccharide to another.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ajugose biosynthetic process","termid":"GO:0033536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"ajugose biosynthetic process using galactan:galactan galactosyltransferase","synonyms":[{"name":"ajugose anabolism using galactan:galactan galactosyltransferase","type":"exact"},{"name":"ajugose biosynthesis using galactan:galactan galactosyltransferase","type":"exact"},{"name":"ajugose formation using galactan:galactan galactosyltransferase","type":"exact"},{"name":"ajugose synthesis using galactan:galactan galactosyltransferase","type":"exact"}],"termid":"GO:0033538"}


id: MOD:01715
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with a Proteome Sciences TMT6plex reporter+balance group.","definition_xrefs":["Unimod:214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"},{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(15)N isotope tagged reagent","termid":"MOD:01429"},{"relation_name":"is_a","term_name":"isotope tagged reagent acylated residue","termid":"MOD:01705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex reporter+balance reagent acylated residue","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01715"}


id: PBO:0081424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 280B","termid":"PBO:0081424"}


id: PATO:0002457
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's similarity to the appearance of a leaf.","definition_xrefs":["PATOC:JL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leaf-like","termid":"PATO:0002457"}


id: PATO:0002373
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's location of features or characteristics along the mediolateral axis.","definition_xrefs":["PATOC:DS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positional polarity","termid":"PATO:0001769"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediolateral polarity","termid":"PATO:0002373"}


id: PBO:0002132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S24 (predicted)","termid":"PBO:0002132"}


id: PBO:0061667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUP50 divergent transcript","termid":"PBO:0061667"}


id: PBO:0065438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 1 pseudogene 11","termid":"PBO:0065438"}


id: PR:000050549
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A LIM domain-containing protein C4F6.12 (Schizosaccharomyces pombe) that has not been phosphorylated at positions equivalent to Ser-3, Ser-24, Ser-31, Thr-55, Thr-64, Ser-67, Ser-97, Ser-136, and Thr-214 of the amino acid sequence represented by UniProtKB:O74398. Example: UniProtKB:O74398, Ser-3/Ser-24/Ser-31/Thr-55/Thr-64/Ser-67/Ser-97/Ser-136/Thr-214, PR:000026291.","definition_xrefs":["PRO:DAN","PomBase:VW","PMID:34133210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LIM domain-containing protein C4F6.12 (Schizosaccharomyces pombe)","termid":"PR:000050547"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pxl1/UnPhos:(S3,S24,S31,T55,T64,S67,S97,S136,T214)","pombase_gene_id":"SPBC4F6.12","synonyms":[{"name":"PomBase_original_PRO_term_name: LIM domain-containing protein C4F6.12 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-pxl1/UnPhos:1","type":"exact"},{"name":"UniProtKB:O74398, Ser-3/Ser-24/Ser-31/Thr-55/Thr-64/Ser-67/Ser-97/Ser-136/Thr-214, PR:000026291","type":"narrow"},{"name":"pxl1/UnPhos:(S3,S24,S31,T55,T64,S67,S97,S136,T214)","type":"exact"}],"termid":"PR:000050549"}


id: PBO:0113213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial porin and phospholipid scramblase; voltage-dependent anion channel in the outer mitochondrial membrane required for maintenance of mitochondrial osmotic stability and membrane permeability; scramblase involved in mitochondrial transbilayer translocation of phospholipids; ubiquinone binding protein; couples glutathione pools of the intermembrane space and the cytosol; phosphorylated; protein abundance increases in response to DNA replication stress; orthologous to human VDAC1 and 2","termid":"PBO:0113213"}


id: PBO:0004844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane alkaline phosphatase (predicted)","termid":"PBO:0004844"}


id: PR:P36622
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ste4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P36622"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sexual differentiation protein ste4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1565.04c","synonyms":[{"name":"Spom972h-ste4","type":"exact"}],"termid":"PR:P36622"}


id: PBO:0092001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced P-specific trancription factor Pc","termid":"PBO:0092001"}


id: GO:0102187
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4alpha-carboxy,4beta,14alpha-dimethyl-9beta,19-cyclo-5alpha-cholest-24-en-3beta-ol + NAD(1-) = 4alpha,14alpha-dimethyl-9beta,19-cyclo-5alpha-cholest-24-en-3-one + NADH(2-) + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 4alpha-carboxy,4beta,14alpha-dimethyl-9beta,19-cyclo-5alpha-cholest-24-en-3beta-ol dehydrogenase/C4-decarboxylase activity (obsolete GO:0102187)","termid":"GO:0102187"}


id: FYPO:0000940
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000933"},{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle pole body","termid":"FYPO:0000939"},{"relation_name":"is_a","term_name":"decreased protein localization to spindle pole body","termid":"FYPO:0002770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle pole body","synonyms":[{"name":"decreased protein localisation to mitotic spindle pole body","type":"exact"},{"name":"decreased protein localization to mitotic SPB","type":"exact"},{"name":"decreased protein localization to spindle pole body during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to spindle pole body during vegetative growth","type":"exact"},{"name":"reduced protein localization to mitotic spindle pole body","type":"exact"}],"termid":"FYPO:0000940"}


id: PBO:0029982
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_mononucleate_vegetative_cell","termid":"PBO:0029982"}


id: PR:P40903
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- isp6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sexual differentiation process putative subtilase-type proteinase isp6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.04","synonyms":[{"name":"Spom972h-isp6","type":"exact"}],"termid":"PR:P40903"}


id: PBO:0079199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSPY like 2","termid":"PBO:0079199"}


id: GO:0072096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the frequency, rate or extent of branch elongation involved in ureteric bud branching, the growth of a branch of the ureteric bud along its axis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"regulation of branch elongation involved in ureteric bud branching","termid":"GO:0072095"},{"relation_name":"negatively_regulates","term_name":"branch elongation involved in ureteric bud branching","termid":"GO:0060681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of branch elongation involved in ureteric bud branching","termid":"GO:0072096"}


id: PBO:0067159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 211, pseudogene","termid":"PBO:0067159"}


id: GO:0098872
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A G protein-coupled neurotransmitter receptor activity occurring in the postsynaptic membrane, that is involved in regulating the cytosolic concentration of calcium ions in the postsynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled neurotransmitter receptor activity","termid":"GO:0099528"},{"relation_name":"is_a","term_name":"neurotransmitter receptor activity involved in regulation of postsynaptic cytosolic calcium ion concentration","termid":"GO:0099583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled neurotransmitter receptor activity involved in regulation of postsynaptic cytosolic calcium ion concentration","synonyms":[{"name":"G-protein coupled neurotransmitter receptor activity involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"G-protein coupled neurotransmitter receptor activity involved in regulation of postsynaptic cytosolic calcium levels","type":"exact"}],"termid":"GO:0098872"}


id: PBO:0053826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1090","termid":"PBO:0053826"}


id: GO:0006747
data:
  {"annotated_genes":["SJAG_01937"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110270],"is_not":false,"summary":null,"term":"GO:0006747"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of FAD, the oxidized form of flavin-adenine dinucleotide.","definition_xrefs":["PMID:20822113","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FAD metabolic process","termid":"GO:0046443"},{"relation_name":"is_a","term_name":"flavin adenine dinucleotide biosynthetic process","termid":"GO:0072388"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01937":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"FAD biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"FAD anabolism","type":"exact"},{"name":"FAD biosynthesis","type":"exact"},{"name":"FAD formation","type":"exact"},{"name":"FAD synthesis","type":"exact"},{"name":"oxidized flavin adenine dinucleotide biosynthesis","type":"exact"},{"name":"oxidized flavin adenine dinucleotide biosynthetic process","type":"exact"},{"name":"oxidized flavin-adenine dinucleotide biosynthesis","type":"exact"},{"name":"oxidized flavin-adenine dinucleotide biosynthetic process","type":"exact"}],"termid":"GO:0006747","terms_by_termid":{"GO:0006747":null}}


id: PBO:0042876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 144","termid":"PBO:0042876"}


id: FYPO:0002146
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to diethyl maleate (DEM) is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal RNA level during cellular response to DEM","synonyms":[{"name":"normal RNA accumulation during cellular response to DEM","type":"related"},{"name":"normal RNA level during cellular response to DEM during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to DEM during vegetative growth","type":"exact"},{"name":"normal RNA level during cellular response to diethyl maleate","type":"exact"},{"name":"normal mRNA level during cellular response to DEM","type":"narrow"},{"name":"normal transcript level during cellular response to DEM","type":"exact"}],"termid":"FYPO:0002146"}


id: GO:0033228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cysteine from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid export across plasma membrane","termid":"GO:0032973"},{"relation_name":"is_a","term_name":"cysteine transmembrane transport","termid":"GO:1903712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"cysteine export across plasma membrane","synonyms":[{"name":"cysteine export","type":"broad"}],"termid":"GO:0033228"}


id: PBO:0052697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 16 pseudogene 5","termid":"PBO:0052697"}


id: GO:0005313
data:
  {"annotated_genes":["SJAG_00522","SJAG_00626","SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92625,94305,99957],"is_not":false,"summary":null,"term":"GO:0005313"}]},"cv_name":"molecular_function","definition":"Enables the transfer of L-glutamate from one side of a membrane to the other. L-glutamate is the anion of 2-aminopentanedioic acid.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acidic amino acid transmembrane transporter activity","termid":"GO:0015172"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_00626":null,"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"L-glutamate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:66336","Reactome:R-HSA-428052","Reactome:R-HSA-210444","Reactome:R-HSA-5624256"],"synonyms":[{"name":"L-glutamate transporter activity","type":"broad"},{"name":"glutamate transmembrane transporter activity","type":"broad"},{"name":"glutamate/aspartate porter activity","type":"narrow"},{"name":"glutamate/aspartate:sodium symporter activity","type":"narrow"}],"termid":"GO:0005313","terms_by_termid":{"GO:0005313":null}}


id: PBO:0047943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(15)(q22)","termid":"PBO:0047943"}


id: GO:0035932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of aldosterone into the circulatory system. Aldosterone is a pregnane-based steroid hormone produced by the outer-section (zona glomerulosa) of the adrenal cortex in the adrenal gland, and acts on the distal tubules and collecting ducts of the kidney to cause the conservation of sodium, secretion of potassium, increased water retention, and increased blood pressure. The overall effect of aldosterone is to increase reabsorption of ions and water in the kidney.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"mineralocorticoid secretion","termid":"GO:0035931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"aldosterone secretion","termid":"GO:0035932"}


id: FYPO:0001160
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested at the mitotic G2/M phase transition when the population in which the cell is found is in stationary phase.","definition_xrefs":["PomBase:mah","PMID:19366728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0000400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"cell cycle arrest at mitotic G2/M phase transition during stationary phase","synonyms":[{"name":"cell cycle arrest in mitotic G2 phase during stationary phase","type":"related"},{"name":"mitotic G2 phase arrest during stationary phase","type":"exact"},{"name":"mitotic cell cycle arrest at mitotic G2/M phase transition during stationary phase","type":"exact"}],"termid":"FYPO:0001160"}


id: PBO:0045480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desmocollin 2","termid":"PBO:0045480"}


id: GO:0000364
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the second transesterification reaction of U2-type spliceosomal mRNA splicing. Ligation of the two exons occurs via a transesterification reaction where the free 3'-hydroxyl group of the 5' exon is the nucleophile attacking the 3' splice site. Non-expressed sequences are now detached from the exons. In cis splicing, the intron is in a lariat structure. The catalytic site is thought to be formed by U6 and/or U2 snRNAs and/or associated proteins.","definition_xrefs":["ISBN:0879695897","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete second U2-type spliceosomal transesterification activity (obsolete GO:0000364)","synonyms":[{"name":"3'-splice site cleavage, exon ligation","type":"broad"},{"name":"second U2-type spliceosomal transesterification activity","type":"exact"}],"termid":"GO:0000364"}


id: PBO:0062405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 29 pseudogene","termid":"PBO:0062405"}


id: PBO:0090266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur ATPase involved in ribosome biogenesis and translation Rli1","termid":"PBO:0090266"}


id: GO:0097755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the diameter of blood vessels.","definition_xrefs":["GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of blood vessel diameter (obsolete GO:0097755)","synonyms":[{"name":"positive regulation of vasodilation","type":"related"}],"termid":"GO:0097755"}


id: PBO:0049827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDGF like 2","termid":"PBO:0049827"}


id: PBO:0043603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collectin subfamily member 12","termid":"PBO:0043603"}


id: PBO:0029330
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H2A_phosphorylation","termid":"PBO:0029330"}


id: PBO:0058582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6715b","termid":"PBO:0058582"}


id: PBO:0063496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ and LIM domain 4","termid":"PBO:0063496"}


id: GO:0110153
data:
  {"annotated_genes":["SJAG_03091"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101232],"is_not":false,"summary":null,"term":"GO:0110153"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5'-end NAD+-phospho-ribonucleoside in mRNA + H2O = a 5'-end phospho-adenosine-phospho-ribonucleoside in mRNA + beta-nicotinamide D-ribonucleotide + 2 H+.","definition_xrefs":["RHEA:60876","GOC:sp","PMID:25533955","PMID:31101919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03091":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0140098"],"is_obsolete":false,"name":"RNA NAD-cap (NMN-forming) hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110153","terms_by_termid":{"GO:0110153":null}}


id: PR:O14307
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRMT61A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00817","PRO:DNx","PANTHER:PTHR12133:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit trm61 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9G1.12","secondary_identifiers":["UniProtKB:O14307"],"synonyms":[{"name":"Spom972h-TRMT61A","type":"exact"},{"name":"tRNA(m1A58)-methyltransferase subunit trm61 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA(m1A58)MTase subunit trm61 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14307"}


id: PBO:0075844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU72 like 5","termid":"PBO:0075844"}


id: GO:0050947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of early stripe melanocyte differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of melanocyte differentiation","termid":"GO:0045635"},{"relation_name":"is_a","term_name":"regulation of early stripe melanocyte differentiation","termid":"GO:0050939"},{"relation_name":"negatively_regulates","term_name":"early stripe melanocyte differentiation","termid":"GO:0050933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of early stripe melanocyte differentiation","synonyms":[{"name":"down regulation of early stripe melanocyte differentiation","type":"exact"},{"name":"down-regulation of early stripe melanocyte differentiation","type":"exact"},{"name":"downregulation of early stripe melanocyte differentiation","type":"exact"},{"name":"inhibition of early stripe melanocyte differentiation","type":"narrow"},{"name":"negative regulation of early stripe melanophore differentiation","type":"exact"}],"termid":"GO:0050947"}


id: PR:P0CT36
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-3 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2E1P3.03c","synonyms":[{"name":"Spom972h-Tf2-3","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT36"}


id: PBO:0084280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein of the ER; forms an ER-membrane associated protein complex with Slp1p; identified along with SLP1 in a screen for mutants defective in the unfolded protein response (UPR); proposed to function in the folding of integral membrane proteins; interacts genetically with MPS3; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0084280"}


id: PATO:0000390
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000390 extreme (obsolete PATO:0000390)","termid":"PATO:0000390"}


id: PBO:0027329
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_translation_of_ribosomal_proteins","termid":"PBO:0027329"}


id: PBO:0071347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 5","termid":"PBO:0071347"}


id: PBO:0056325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP3K7 C-terminal like","termid":"PBO:0056325"}


id: FYPO:0002812
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of glycerol measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular glycerol level","synonyms":[{"name":"decreased cellular glycerol level during mitotic cell cycle","type":"related"},{"name":"decreased cellular glycerol level during vegetative growth","type":"exact"},{"name":"decreased glycerol accumulation","type":"related"},{"name":"reduced cellular glycerol level","type":"exact"}],"termid":"FYPO:0002812"}


id: PBO:0051960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITPRID2 divergent transcript","termid":"PBO:0051960"}


id: GO:0016111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving polyterpenoid compounds, terpenoids with more than eight isoprene units.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"polyterpenoid metabolic process","synonyms":[{"name":"polyterpene metabolic process","type":"narrow"},{"name":"polyterpene metabolism","type":"narrow"},{"name":"polyterpenoid metabolism","type":"exact"}],"termid":"GO:0016111"}


id: PBO:0089009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid elongase Elo2","termid":"PBO:0089009"}


id: PBO:0034545
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_cohesin_unloading","termid":"PBO:0034545"}


id: PBO:0005608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase Gst1","termid":"PBO:0005608"}


id: GO:0040027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of development of the vulva. Vulval development is the process whose specific outcome is the progression of the egg-laying organ of female and hermaphrodite nematodes over time, from its formation to the mature structure. In nematodes, the vulva is formed from ventral epidermal cells during larval stages to give rise to a fully formed vulva in the adult.","definition_xrefs":["GOC:ems","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vulval development","termid":"GO:0040028"},{"relation_name":"is_a","term_name":"negative regulation of nematode larval development","termid":"GO:0061064"},{"relation_name":"negatively_regulates","term_name":"vulval development","termid":"GO:0040025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vulval development","synonyms":[{"name":"down regulation of vulval development","type":"exact"},{"name":"down-regulation of vulval development","type":"exact"},{"name":"downregulation of vulval development","type":"exact"},{"name":"inhibition of vulval development","type":"narrow"}],"termid":"GO:0040027"}


id: PBO:0000962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beclin family protein, involved in autophagy","termid":"PBO:0000962"}


id: PBO:0045340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyhypusine hydroxylase","termid":"PBO:0045340"}


id: PBO:0000690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two-component GAP Byr4","termid":"PBO:0000690"}


id: PBO:0011134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR6 family, involved in endocytic recycling","termid":"PBO:0011134"}


id: PBO:0089944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prospore membrane alpha-1,3-glucan synthase Mok12","termid":"PBO:0089944"}


id: GO:0033399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cis-zeatin, (2Z)-2-methyl-4-(9H-purin-6-ylamino)but-2-en-1-ol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zeatin metabolic process","termid":"GO:0033397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cis-zeatin metabolic process","synonyms":[{"name":"cis-zeatin metabolism","type":"exact"}],"termid":"GO:0033399"}


id: GO:0009274
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protective structure outside the cytoplasmic membrane composed of peptidoglycan (also known as murein), a molecule made up of a glycan (sugar) backbone of repetitively alternating N-acetylglucosamine and N-acetylmuramic acid with short, attached, cross-linked peptide chains containing unusual amino acids. An example of this component is found in Escherichia coli.","definition_xrefs":["GOC:mlg","ISBN:0815108893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall","termid":"GO:0005618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"peptidoglycan-based cell wall","synonyms":[{"name":"envelope","type":"broad"},{"name":"murein sacculus","type":"related"},{"name":"peptidoglycan","type":"narrow"}],"termid":"GO:0009274"}


id: PBO:0078815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trophinin associated protein","termid":"PBO:0078815"}


id: PBO:0080357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 12 pseudogene","termid":"PBO:0080357"}


id: PBO:0081443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 300","termid":"PBO:0081443"}


id: PBO:0000053
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"present at telomere ends","termid":"PBO:0000053"}


id: GO:1903851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cristae formation.","definition_xrefs":["GOC:TermGenie","PMID:19279012","GOC:pad","GOC:PARL","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"regulation of cristae formation","termid":"GO:1903850"},{"relation_name":"negatively_regulates","term_name":"cristae formation","termid":"GO:0042407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"negatively_regulates","termid":"GO:0007005"},{"rel_name":"negatively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0007005","GO:0061024"],"is_obsolete":false,"name":"negative regulation of cristae formation","synonyms":[{"name":"down regulation of cristae formation","type":"exact"},{"name":"down-regulation of cristae formation","type":"exact"},{"name":"downregulation of cristae formation","type":"exact"},{"name":"inhibition of cristae formation","type":"narrow"}],"termid":"GO:1903851"}


id: PBO:0087701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RES complex; RES complex is required for nuclear pre-mRNA retention and splicing; involved in bud-site selection; diploid mutants display a unipolar budding pattern instead of the wild-type bipolar pattern due to a specific defect in MATa1 pre-mRNA splicing which leads to haploid gene expression in diploids","termid":"PBO:0087701"}


id: PBO:0028218
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cut_during_cellular_response_to_salt_stress","termid":"PBO:0028218"}


id: FYPO:0003734
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alcohol dehydrogenase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal alcohol dehydrogenase activity","termid":"FYPO:0003733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"decreased alcohol dehydrogenase activity","synonyms":[{"name":"decreased alcohol dehydrogenase (NAD) activity","type":"exact"},{"name":"reduced alcohol dehydrogenase activity","type":"exact"}],"termid":"FYPO:0003734"}


id: GO:0021914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of smoothened signaling that is involved in the patterns of cell differentiation in the ventral spinal cord.","definition_xrefs":["GOC:jid","GOC:tb","PMID:11262869","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smoothened signaling pathway","termid":"GO:0045879"},{"relation_name":"negatively_regulates","term_name":"smoothened signaling pathway involved in ventral spinal cord patterning","termid":"GO:0021910"},{"relation_name":"part_of","term_name":"spinal cord dorsal/ventral patterning","termid":"GO:0021513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of smoothened signaling pathway involved in ventral spinal cord patterning","synonyms":[{"name":"down regulation of smoothened signaling pathway in ventral spinal cord patterning","type":"exact"},{"name":"down-regulation of smoothened signaling pathway in ventral spinal cord patterning","type":"exact"},{"name":"downregulation of smoothened signaling pathway in ventral spinal cord patterning","type":"exact"},{"name":"inhibition of smoothened signaling pathway in ventral spinal cord patterning","type":"narrow"},{"name":"negative regulation of hedgehog signaling pathway involved in ventral spinal cord patterning","type":"exact"},{"name":"negative regulation of hh signaling pathway involved in ventral spinal cord patterning","type":"exact"},{"name":"negative regulation of smoothened signalling pathway in ventral spinal cord patterning","type":"exact"}],"termid":"GO:0021914"}


id: GO:0032993
data:
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id: GO:0042150
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id: GO:0110017
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