# terms

id: GO:0098715
data:
  {"annotated_genes":["SJAG_01406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97740],"is_not":false,"summary":null,"term":"GO:0098715"}]},"cv_name":"biological_process","definition":"The directed movement of malonic acid from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"malonic acid transmembrane transport","termid":"GO:1901553"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01406":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"malonic acid import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0097406"],"synonyms":[{"name":"malonate import into cell","type":"exact"},{"name":"malonic acid import into cell","type":"exact"}],"termid":"GO:0098715","terms_by_termid":{"GO:0098715":null}}


id: PBO:0087152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA endoribonuclease involved in perinuclear mRNP quality control; involved in perinuclear mRNP quality control via the turnover of aberrant, unprocessed pre-mRNAs; interacts with subunits of THO/TREX, TREX-2, and RNA polymerase II; contains a PIN (PilT N terminus) domain","termid":"PBO:0087152"}


id: PR:O94713
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu27 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 27 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.14c","synonyms":[{"name":"Spom972h-meu27","type":"exact"}],"termid":"PR:O94713"}


id: PBO:0083788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein involved in rRNA maturation and ribosomal assembly; involved in the processing of pre-rRNA and the assembly of the 60S ribosomal subunit; interacts with ribosomal protein L11; localizes predominantly to the nucleolus; constituent of 66S pre-ribosomal particles","termid":"PBO:0083788"}


id: GO:0051850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The production of structures and/or molecules in an organism that are required for the acquisition and/or utilization of nutrients obtained from its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interaction with symbiont","termid":"GO:0051702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acquisition of nutrients from symbiont","termid":"GO:0051850"}


id: GO:0043937
data:
  {"annotated_genes":["SJAG_00993","SJAG_02169","SJAG_04140","SJAG_04853"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"},{"annotations":[98385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[86758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"},{"annotations":[86759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043938"},{"annotations":[88209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034307"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sporulation, the process whose specific outcome is the progression of a spore over time, from its initiation to the mature structure.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"sporulation","termid":"GO:0043934"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_02169":null,"SJAG_04140":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sporulation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043937","terms_by_termid":{"GO:0034307":null,"GO:0043938":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null}}


id: PBO:0085199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Outer kinetochore protein and component of the Ctf3 subcomplex; binds to centromeric DNA in a Ctf19p-dependent manner; involved in chromosome segregation and minichromosome maintenance; orthologous to human centromere constitutive-associated network (CCAN) subunit CENP-K and fission yeast sim4","termid":"PBO:0085199"}


id: PBO:0049491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.B variant histone 1","termid":"PBO:0049491"}


id: PBO:0031668
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_protein_transport","termid":"PBO:0031668"}


id: FYPO:0000072
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of benomyl than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002682","FYPO:0000003","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"resistance to benomyl","synonyms":[{"name":"resistance to benomyl during mitotic cell cycle","type":"related"},{"name":"resistance to benomyl during vegetative growth","type":"exact"},{"name":"resistance to methyl [1-(butylcarbamoyl)-1H-benzimidazol-2-yl]carbamate","type":"exact"},{"name":"resistant to benomyl","type":"exact"}],"termid":"FYPO:0000072"}


id: PBO:0049312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GSTT1 antisense RNA 1","termid":"PBO:0049312"}


id: PBO:0091809
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. octosporus rsv1","termid":"PBO:0091809"}


id: PBO:0063166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAX3 and PAX7 binding protein 1","termid":"PBO:0063166"}


id: FYPO:0000956
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing bismuth ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000139","FYPO:0000257","FYPO:0000003","FYPO:0002057","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on bismuth","synonyms":[{"name":"normal cell population growth in presence of bismuth","type":"exact"},{"name":"normal cell population growth on bismuth","type":"exact"},{"name":"normal cellular response to bismuth","type":"related"},{"name":"normal growth on bismuth ions","type":"exact"},{"name":"normal vegetative cell population growth on bismuth","type":"exact"}],"termid":"FYPO:0000956"}


id: PBO:0040199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 12","termid":"PBO:0040199"}


id: GO:0018507
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3S,4R)-3,4-dihydrophenanthrene-3,4-diol + NAD+ = H+ + NADH + phenanthrene-3,4-diol.","definition_xrefs":["EC:1.3.1.49","RHEA:16253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"cis-3,4-dihydrophenanthrene-3,4-diol dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r0488","KEGG_REACTION:R04151","MetaCyc:1.3.1.49-RXN"],"synonyms":[{"name":"(+)-cis-3,4-dihydrophenanthrene-3,4-diol:NAD+ 3,4-oxidoreductase activity","type":"related"},{"name":"cis-3,4-dihydroxy-3,4-dihydrophenanthrene dehydrogenase activity","type":"exact"}],"termid":"GO:0018507"}


id: GO:1990195
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A bacterial transmembrane transporter complex that spans the entire cell membrane system and possesses ATP-dependent xenobiotic transport activity pumping drugs (typically antibiotics) and other toxins directly from the cytosol out of the bacterial cell. Typically, it is trimeric consisting of a inner membrane ATPase (IMP), a periplasmic membrane fusion protein (MFP) and an outer membrane factor (OMF). In E. coli, macrolide transporter complexes may consists of MacB (IMP), MacA (MFP) and TolC (OMF) or AcrB (IMP), AcrA (MFP) and TolC (OMF). Trimeric TolC is a common OMF found in many macrolide transporter complexes.","definition_xrefs":["PMID:19254725","GOC:bhm","PMID:18955484","PMID:10879525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"macrolide transmembrane transporter complex","synonyms":[{"name":"AcrAB-TolC complex","type":"narrow"},{"name":"MacAB-TolC complex","type":"narrow"},{"name":"macrolide transporter","type":"related"},{"name":"macrolide transporter complex","type":"broad"}],"termid":"GO:1990195"}


id: PBO:0079490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin domain containing 11","termid":"PBO:0079490"}


id: FYECO:0000055
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Both M-factor and P-factor, endogenously produced by cells, were present in the experiment.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000055 M and P factor produced (obsolete FYECO:0000055)","synonyms":[{"name":"presence of M-factor and P-factor","type":"exact"},{"name":"presence of mating pheromones","type":"exact"}],"termid":"FYECO:0000055"}


id: PBO:0049091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 148","termid":"PBO:0049091"}


id: GO:1903395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of secondary cell septum biogenesis.","definition_xrefs":["GOC:di","PMID:23878277","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of mitotic cytokinetic process","termid":"GO:1903436"},{"relation_name":"regulates","term_name":"secondary cell septum biogenesis","termid":"GO:1990344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0000281","GO:0044085","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of secondary cell septum biogenesis","termid":"GO:1903395"}


id: GO:0048331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the axial mesoderm. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm structural organization","termid":"GO:0048338"},{"relation_name":"part_of","term_name":"axial mesoderm morphogenesis","termid":"GO:0048319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axial mesoderm structural organization","synonyms":[{"name":"axial mesoderm structural organisation","type":"exact"}],"termid":"GO:0048331"}


id: GO:0140671
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chromatin remodeling complex that regulates transcription via acetylation primarily of nucleosomal histones H3 and H2B. In budding yeast shares the histone acetylation (HAT) module of ADA2-GCN5-NGG1-SGF29 with the related SAGA complex.","definition_xrefs":["PMID:28966424","GOC:bhm","PMID:21734642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SAGA-type complex","termid":"GO:0070461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"ADA complex","synonyms":[{"name":"ADA HAT complex","type":"exact"},{"name":"ADA histone acetyltransferase complex","type":"exact"},{"name":"Ada2/Gcn5/Ada3 transcription activator complex","type":"related"},{"name":"scADA","type":"narrow"}],"termid":"GO:0140671"}


id: PBO:0086596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression induced in cells treated with mycotoxins patulin or citrinin; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086596"}


id: PBO:0040943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 14","termid":"PBO:0040943"}


id: GO:0140803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cysteinyl-[protein] + NAD+ = H+ + nicotinamide + S-(ADP-D-ribosyl)-L-cysteinyl-[protein].","definition_xrefs":["RHEA:56612","PMID:25043379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD+-protein ADP-ribosyltransferase activity","termid":"GO:1990404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0140096","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"NAD+-protein-cysteine ADP-ribosyltransferase activity","termid":"GO:0140803"}


id: GO:0043189
data:
  {"annotated_genes":["SJAG_03628","SJAG_04097","SJAG_03579","SJAG_01385","SJAG_01016","SJAG_04793","SJAG_00187","SJAG_03145","SJAG_00349","SJAG_04355","SJAG_02990","SJAG_00783","SJAG_02385","SJAG_03230","SJAG_03792","SJAG_03036","SJAG_05282"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[109301],"is_not":false,"summary":null,"term":"GO:0043189"},{"annotations":[93291,95035,109303,114736,90047,97055,100151,95754,102994,105196,88394,108387,100829,86721,111758,90344,97771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035267"}]},"cv_name":"cellular_component","definition":"A multisubunit complex that catalyzes the acetylation of histones H4 and H2A.","definition_xrefs":["GOC:rb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H4 histone acetyltransferase complex","termid":"GO:1902562"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00187":null,"SJAG_00349":null,"SJAG_00783":null,"SJAG_01016":null,"SJAG_01385":null,"SJAG_02385":null,"SJAG_02990":null,"SJAG_03036":null,"SJAG_03145":null,"SJAG_03230":null,"SJAG_03579":null,"SJAG_03628":null,"SJAG_03792":null,"SJAG_04097":null,"SJAG_04355":null,"SJAG_04793":null,"SJAG_05282":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"H4/H2A histone acetyltransferase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"H4/H2A HAT complex","type":"exact"}],"termid":"GO:0043189","terms_by_termid":{"GO:0035267":null,"GO:0043189":null}}


id: PBO:0058322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4695","termid":"PBO:0058322"}


id: PR:O74519
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- naa50 gene.","definition_xrefs":["UniProtKB:O74519","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized N-acetyltransferase C663.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.13c","synonyms":[{"name":"Spom972h-naa50","type":"exact"}],"termid":"PR:O74519"}


id: PR:O74551
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC777.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C777.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.12c","synonyms":[{"name":"Spom972h-SPCC777.12c","type":"exact"}],"termid":"PR:O74551"}


id: PBO:0077265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein with EGF like and two follistatin like domains 2","termid":"PBO:0077265"}


id: GO:0034279
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 9-alpha-copalyl diphosphate = 9-beta-pimara-7,15-diene + diphosphate.","definition_xrefs":["RHEA:25560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"syn-pimara-7,15-diene synthase activity","secondary_identifiers":["KEGG_REACTION:R09117","MetaCyc:RXN-4883","EC:4.2.3.35"],"synonyms":[{"name":"9alpha-copalyl-diphosphate diphosphate-lyase (9beta-pimara-7,15-diene-forming) activity","type":"exact"}],"termid":"GO:0034279"}


id: GO:0043812
data:
  {"annotated_genes":["SJAG_00880","SJAG_02706"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92971,102103],"is_not":false,"summary":null,"term":"GO:0043812"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidyl-1D-myo-inositol-4-phosphate + H2O = phosphatidyl-1D-myo-inositol + phosphate.","definition_xrefs":["PMID:10224048","RHEA:55652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate 4-phosphatase activity","termid":"GO:0034596"},{"relation_name":"is_a","term_name":"phosphatidylinositol monophosphate phosphatase activity","termid":"GO:0052744"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00880":null,"SJAG_02706":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"phosphatidylinositol-4-phosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"phosphatidylinositol 4-phosphate phosphatase activity","type":"exact"}],"termid":"GO:0043812","terms_by_termid":{"GO:0043812":null}}


id: GO:0014898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The physiological enlargement or overgrowth of all or part of the heart muscle due to an increase in size (not length) of individual cardiac muscle fibers, without cell division, as a result of a disturbance in organismal or cellular homeostasis.","definition_xrefs":["GOC:mtg_muscle","GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle hypertrophy in response to stress","termid":"GO:0003299"},{"relation_name":"is_a","term_name":"cardiac muscle hypertrophy","termid":"GO:0003300"},{"relation_name":"is_a","term_name":"cardiac muscle adaptation","termid":"GO:0014887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle hypertrophy in response to stress","termid":"GO:0014898"}


id: PBO:0026742
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_during_cellular_response_to_UV","termid":"PBO:0026742"}


id: PBO:0034476
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_localization_to_spindle_during_meiosis_I","termid":"PBO:0034476"}


id: GO:1905873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to cell leading edge.","definition_xrefs":["GOC:TermGenie","PMID:26324884","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"is_a","term_name":"regulation of protein localization to cell leading edge","termid":"GO:1905871"},{"relation_name":"positively_regulates","term_name":"protein localization to cell leading edge","termid":"GO:1902463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to cell leading edge","synonyms":[{"name":"activation of protein localisation in cell leading edge","type":"narrow"},{"name":"activation of protein localisation to cell leading edge","type":"narrow"},{"name":"activation of protein localization in cell leading edge","type":"narrow"},{"name":"activation of protein localization to cell leading edge","type":"narrow"},{"name":"positive regulation of protein localisation in cell leading edge","type":"exact"},{"name":"positive regulation of protein localisation to cell leading edge","type":"exact"},{"name":"positive regulation of protein localization in cell leading edge","type":"exact"},{"name":"up regulation of protein localisation in cell leading edge","type":"exact"},{"name":"up regulation of protein localisation to cell leading edge","type":"exact"},{"name":"up regulation of protein localization in cell leading edge","type":"exact"},{"name":"up regulation of protein localization to cell leading edge","type":"exact"},{"name":"up-regulation of protein localisation in cell leading edge","type":"exact"},{"name":"up-regulation of protein localisation to cell leading edge","type":"exact"},{"name":"up-regulation of protein localization in cell leading edge","type":"exact"},{"name":"up-regulation of protein localization to cell leading edge","type":"exact"},{"name":"upregulation of protein localisation in cell leading edge","type":"exact"},{"name":"upregulation of protein localisation to cell leading edge","type":"exact"},{"name":"upregulation of protein localization in cell leading edge","type":"exact"},{"name":"upregulation of protein localization to cell leading edge","type":"exact"}],"termid":"GO:1905873"}


id: GO:0048741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the skeletal muscle fiber over time, from its formation to the mature structure. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast.","definition_xrefs":["GOC:mtg_muscle","GOC:jid","GOC:dph","GOC:ef","GOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myotube cell development","termid":"GO:0014904"},{"relation_name":"part_of","term_name":"skeletal muscle tissue development","termid":"GO:0007519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle fiber development","synonyms":[{"name":"skeletal muscle fibre development","type":"exact"},{"name":"skeletal myofiber development","type":"exact"},{"name":"skeletal myofibre development","type":"exact"}],"termid":"GO:0048741"}


id: SO:0001568
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that changes the process of splicing.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_variant","termid":"SO:0001576"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing_variant","synonyms":[{"name":"Jannovar:splicing_variant","type":"exact"},{"name":"splicing variant","type":"exact"}],"termid":"SO:0001568"}


id: FYPO:0008113
data:
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id: PBO:0075243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 13","termid":"PBO:0075243"}


id: PBO:0028380
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_hypoxanthine_DNA_N-glycosylase_activity","termid":"PBO:0028380"}


id: GO:0036163
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hexaprenyl-4-hydroxy-5-methoxybenzoic acid -> 2-hexaprenyl-6-methoxyphenol + CO2.","definition_xrefs":["PMID:620805","PMID:7028108","GOC:mw","KEGG_REACTION:R06866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"3-hexaprenyl-4-hydroxy-5-methoxybenzoic acid decarboxylase activity","secondary_identifiers":["RHEA:44768"],"termid":"GO:0036163"}


id: PBO:0044561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in azoospermia 2","termid":"PBO:0044561"}


id: GO:0061081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the production of a cytokine that contributes to the immune response.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production involved in immune response","termid":"GO:0002720"},{"relation_name":"positively_regulates","term_name":"myeloid leukocyte cytokine production","termid":"GO:0061082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of myeloid leukocyte cytokine production involved in immune response","synonyms":[{"name":"positive regulation of myeloid cell cytokine production involved in immune response","type":"related"}],"termid":"GO:0061081"}


id: PBO:0060623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCK associated protein 1","termid":"PBO:0060623"}


id: GO:0070727
data:
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id: MOD:00492
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id: GO:1901582
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id: FYPO:0003142
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to methyl methanesulfonate is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased RNA level during cellular response to methyl methanesulfonate","synonyms":[{"name":"decreased RNA accumulation during cellular response to methyl methanesulfonate","type":"related"},{"name":"decreased RNA level during cellular response to MMS","type":"exact"},{"name":"decreased RNA level during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to methyl methanesulphonate","type":"exact"},{"name":"decreased mRNA level during cellular response to methyl methanesulfonate","type":"narrow"},{"name":"decreased transcript level during cellular response to methyl methanesulfonate","type":"exact"},{"name":"reduced RNA level during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0003142"}


id: FYPO:0007125
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id: GO:0140124
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id: GO:0043739
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Hydrolyzes mismatched double-stranded DNA and polynucleotides, releasing free uracil and leaving an apyrimidinic (AP) site.","definition_xrefs":["EC:3.2.2.28","PMID:24739389"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uracil DNA N-glycosylase activity","termid":"GO:0004844"},{"relation_name":"is_a","term_name":"pyrimidine-specific mismatch base pair DNA N-glycosylase activity","termid":"GO:0008263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016798","GO:0140097"],"is_obsolete":false,"name":"G/U mismatch-specific uracil-DNA glycosylase activity","synonyms":[{"name":"GU mismatch-specific uracil-DNA glycosylase activity","type":"exact"},{"name":"MUG","type":"exact"},{"name":"uracil mismatch repair protein","type":"broad"}],"termid":"GO:0043739"}


id: GO:0002882
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id: PBO:0048202
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit alpha6","termid":"PBO:0048202"}


id: PBO:0071340
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L28 pseudogene 4","termid":"PBO:0071340"}


id: PBO:0082960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein of unknown function; APCC(Cdh1) substrate; potentially phosphorylated by Cdc28p; YBR138C is not an essential gene","termid":"PBO:0082960"}


id: PBO:0044221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortexin 2","termid":"PBO:0044221"}


id: FYPO:0002802
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a cell has a nucleus in an abnormal location at the cell cortex when the cell is subject to nitrogen starvation. The normal location is at the midpoint of the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized nucleus","termid":"FYPO:0002069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"nucleus mislocalized to cell cortex during nitrogen starvation","synonyms":[{"name":"nuclear displacement to cell cortex during nitrogen starvation","type":"exact"},{"name":"nucleus displaced to cell cortex during nitrogen starvation","type":"exact"},{"name":"nucleus mislocalised to cell cortex during nitrogen starvation","type":"exact"},{"name":"nucleus mislocalized to cell cortex during nitrogen depletion","type":"exact"},{"name":"nucleus mislocalized to cell cortex during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0002802"}


id: GO:0001775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A multicellular organismal process by which exposure to an activating factor such as a cellular or soluble ligand results in a change in the morphology or behavior of a cell.","definition_xrefs":["GOC:mgi_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell activation","termid":"GO:0001775"}


id: PBO:0053254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM homeobox 6","termid":"PBO:0053254"}


id: GO:0009662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an etioplast. An etioplast is a plastid arrested in the development of chloroplasts from proplastids due to absence of light or low light conditions.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid organization","termid":"GO:0009657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"etioplast organization","synonyms":[{"name":"etioplast organisation","type":"exact"},{"name":"etioplast organization and biogenesis","type":"related"}],"termid":"GO:0009662"}


id: PBO:0066375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RDM1 pseudogene 2","termid":"PBO:0066375"}


id: GO:0048785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the hatching gland over time, from its formation to the mature structure. The cells of the hatching gland contain enzymes responsible for solubilization of the egg chorion, facilitating the hatching process.","definition_xrefs":["GOC:bf","GOC:dh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hatching gland development","termid":"GO:0048785"}


id: GO:0140499
data:
  {"annotated_genes":["SJAG_03681","SJAG_00883","SJAG_03126","SJAG_02451","SJAG_01679","SJAG_03353","SJAG_04259","SJAG_02336","SJAG_02169","SJAG_01297"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90241],"is_not":false,"summary":null,"term":"GO:0140499"},{"annotations":[103358,108109,95669,110428,109940,100009,86753,112068,104384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of negative regulation of mitotic spindle assembly checkpoint signaling.","definition_xrefs":["PMID:28017606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"positive regulation of mitotic metaphase/anaphase transition","termid":"GO:0045842"},{"relation_name":"is_a","term_name":"positive regulation of mitotic sister chromatid segregation","termid":"GO:0062033"},{"relation_name":"is_a","term_name":"negative regulation of spindle checkpoint","termid":"GO:0090233"},{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle spindle assembly checkpoint","termid":"GO:0090266"},{"relation_name":"negatively_regulates","term_name":"mitotic spindle assembly checkpoint signaling","termid":"GO:0007094"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0000070"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0044772"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0000070","GO:0044772","GO:0007049","GO:0023052"],"is_obsolete":false,"name":"negative regulation of mitotic spindle assembly checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140499","terms_by_termid":{"GO:0140499":null,"GO:1902426":null}}


id: PBO:0062283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily J member 7 pseudogene","termid":"PBO:0062283"}


id: GO:0007112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle process that occurs as part of the male meiotic cell cycle and results in the division of the cytoplasm of a cell to produce two daughter cells.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cytokinesis","termid":"GO:0033206"},{"relation_name":"part_of","term_name":"male meiotic nuclear division","termid":"GO:0007140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0140013"],"is_obsolete":false,"name":"male meiosis cytokinesis","synonyms":[{"name":"cytokinesis after male meiosis","type":"exact"},{"name":"cytokinesis involved in male meiotic cell cycle","type":"exact"}],"termid":"GO:0007112"}


id: PBO:0058096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4312","termid":"PBO:0058096"}


id: GO:0071893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to its receptor on the surface of a target cell, which contributes to nephric duct formation.","definition_xrefs":["GOC:mah","GOC:mtg_kidney_jan10"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in nephric duct formation (obsolete GO:0071893)","synonyms":[{"name":"BMP signalling pathway involved in nephric duct formation","type":"exact"}],"termid":"GO:0071893"}


id: PBO:0040280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase Na+/K+ transporting subunit alpha 1","termid":"PBO:0040280"}


id: PBO:0003902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation initiation factor (predicted)","termid":"PBO:0003902"}


id: RO:0002256
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"t1 induced_by t2 if there is a process of developmental induction (GO:0031128) with t1 and t2 as interacting participants. t2 causes t1 to change its fate from a precursor anatomical structure type T to T', where T' develops_from T","direct_ancestors":[{"relation_name":"is_a","term_name":"developmentally_preceded_by","termid":"RO:0002258"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmentally_induced_by","termid":"RO:0002256"}


id: PBO:0030713
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_heat_shock_during_vegetative_growth","termid":"PBO:0030713"}


id: PBO:0076751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teratocarcinoma-derived growth factor 1 pseudogene 1","termid":"PBO:0076751"}


id: PBO:0046161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELF2 pseudogene 1","termid":"PBO:0046161"}


id: PBO:0057025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 124-2","termid":"PBO:0057025"}


id: PBO:0055484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2917","termid":"PBO:0055484"}


id: FYPO:0005304
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of progression through interphase of the mitotic cell cycle is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of mitotic cell cycle phase","termid":"FYPO:0001069"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of mitotic interphase","synonyms":[{"name":"decreased rate of mitotic interphase progression","type":"related"},{"name":"delayed mitotic interphase progression","type":"related"},{"name":"delayed mitotic interphase progression during vegetative growth","type":"related"},{"name":"increased duration of interphase during mitotic cell cycle","type":"exact"},{"name":"increased duration of mitotic interphase during vegetative growth","type":"exact"},{"name":"prolonged mitotic interphase","type":"exact"},{"name":"reduced rate of mitotic interphase progression","type":"related"}],"termid":"FYPO:0005304"}


id: GO:0010469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a signaling receptor activity. Receptor activity is when a molecule combines with an extracellular or intracellular messenger to initiate a change in cell activity.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of molecular function","termid":"GO:0065009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of signaling receptor activity","synonyms":[{"name":"regulation of receptor activity","type":"broad"},{"name":"regulation of signalling receptor activity","type":"exact"}],"termid":"GO:0010469"}


id: PBO:0087731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Shu complex (aka PCSS complex); Shu complex also includes Psy3, Shu1, Shu2, and promotes error-free DNA repair; Shu complex mediates inhibition of Srs2p anti-recombinase function; promotes formation of Rad51p filaments; Psy3p and Csm2p contain similar DNA-binding regions which work together to form a single DNA binding site; required for accurate chromosome segregation during meiosis","termid":"PBO:0087731"}


id: PBO:0005058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TDT malic acid transporter (predicted)","termid":"PBO:0005058"}


id: GO:0060876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the semicircular canal from the otic vesicle. This process begins with the regionalization of the vesicle that specifies the area where the vesicles will form and continues through the process of fusion which forms the initial tubes.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube formation","termid":"GO:0035148"},{"relation_name":"part_of","term_name":"semicircular canal morphogenesis","termid":"GO:0048752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"semicircular canal formation","termid":"GO:0060876"}


id: GO:0015423
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + maltose(out) = ADP + phosphate + maltose(in).","definition_xrefs":["RHEA:22132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maltose transmembrane transporter activity","termid":"GO:0005363"},{"relation_name":"is_a","term_name":"ABC-type oligosaccharide transporter activity","termid":"GO:0015422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ABC-type maltose transporter activity","secondary_identifiers":["EC:7.5.2.1","MetaCyc:ABC-16-RXN"],"synonyms":[{"name":"ABC-type maltose transporter","type":"exact"},{"name":"ATP-dependent maltose transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled maltose transmembrane transporter activity","type":"related"},{"name":"maltooligosaccharide-importing ATPase activity","type":"related"},{"name":"maltose ABC transporter","type":"exact"},{"name":"maltose-transporting ATPase activity","type":"related"}],"termid":"GO:0015423"}


id: PATO:0002099
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a bearer by virtue of its stable specialization to a particular cell type.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular potency","termid":"PATO:0001397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"differentiated","termid":"PATO:0002099"}


id: PBO:0011072
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in archaea","termid":"PBO:0011072"}


id: PBO:0047274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FA complementation group A","termid":"PBO:0047274"}


id: SO:0000971
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000971 DNA_replication_mode (obsolete SO:0000971)","synonyms":[{"name":"DNA replication mode","type":"exact"}],"termid":"SO:0000971"}


id: GO:1903614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of protein tyrosine phosphatase activity.","definition_xrefs":["GOC:TermGenie","PMID:11129957","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of protein tyrosine phosphatase activity (obsolete GO:1903614)","synonyms":[{"name":"down regulation of PPT-phosphatase activity","type":"exact"},{"name":"down regulation of PTP-phosphatase activity","type":"exact"},{"name":"down regulation of PTPase activity","type":"exact"},{"name":"down regulation of [phosphotyrosine]protein phosphatase activity","type":"exact"},{"name":"down regulation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"exact"},{"name":"down regulation of phosphotyrosine histone phosphatase activity","type":"exact"},{"name":"down regulation of phosphotyrosine phosphatase activity","type":"exact"},{"name":"down regulation of phosphotyrosine protein phosphatase activity","type":"exact"},{"name":"down regulation of phosphotyrosylprotein phosphatase activity","type":"exact"},{"name":"down regulation of protein phosphotyrosine phosphatase activity","type":"exact"},{"name":"down regulation of protein tyrosine phosphatase activity","type":"exact"},{"name":"down regulation of protein-tyrosine-phosphatase activity","type":"exact"},{"name":"down regulation of protein-tyrosine-phosphate phosphohydrolase activity","type":"exact"},{"name":"down regulation of tyrosine O-phosphate phosphatase activity","type":"exact"},{"name":"down regulation of tyrosylprotein phosphatase activity","type":"exact"},{"name":"down-regulation of PPT-phosphatase activity","type":"exact"},{"name":"down-regulation of PTP-phosphatase activity","type":"exact"},{"name":"down-regulation of PTPase activity","type":"exact"},{"name":"down-regulation of [phosphotyrosine]protein phosphatase activity","type":"exact"},{"name":"down-regulation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"exact"},{"name":"down-regulation of phosphotyrosine histone phosphatase activity","type":"exact"},{"name":"down-regulation of phosphotyrosine phosphatase activity","type":"exact"},{"name":"down-regulation of phosphotyrosine protein phosphatase activity","type":"exact"},{"name":"down-regulation of phosphotyrosylprotein phosphatase activity","type":"exact"},{"name":"down-regulation of protein phosphotyrosine phosphatase activity","type":"exact"},{"name":"down-regulation of protein tyrosine phosphatase activity","type":"exact"},{"name":"down-regulation of protein-tyrosine-phosphatase activity","type":"exact"},{"name":"down-regulation of protein-tyrosine-phosphate phosphohydrolase activity","type":"exact"},{"name":"down-regulation of tyrosine O-phosphate phosphatase activity","type":"exact"},{"name":"down-regulation of tyrosylprotein phosphatase activity","type":"exact"},{"name":"downregulation of PPT-phosphatase activity","type":"exact"},{"name":"downregulation of PTP-phosphatase activity","type":"exact"},{"name":"downregulation of PTPase activity","type":"exact"},{"name":"downregulation of [phosphotyrosine]protein phosphatase activity","type":"exact"},{"name":"downregulation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"exact"},{"name":"downregulation of phosphotyrosine histone phosphatase activity","type":"exact"},{"name":"downregulation of phosphotyrosine phosphatase activity","type":"exact"},{"name":"downregulation of phosphotyrosine protein phosphatase activity","type":"exact"},{"name":"downregulation of phosphotyrosylprotein phosphatase activity","type":"exact"},{"name":"downregulation of protein phosphotyrosine phosphatase activity","type":"exact"},{"name":"downregulation of protein tyrosine phosphatase activity","type":"exact"},{"name":"downregulation of protein-tyrosine-phosphatase activity","type":"exact"},{"name":"downregulation of protein-tyrosine-phosphate phosphohydrolase activity","type":"exact"},{"name":"downregulation of tyrosine O-phosphate phosphatase activity","type":"exact"},{"name":"downregulation of tyrosylprotein phosphatase activity","type":"exact"},{"name":"inhibition of PPT-phosphatase activity","type":"narrow"},{"name":"inhibition of PTP-phosphatase activity","type":"narrow"},{"name":"inhibition of PTPase activity","type":"narrow"},{"name":"inhibition of [phosphotyrosine]protein phosphatase activity","type":"narrow"},{"name":"inhibition of phosphoprotein phosphatase (phosphotyrosine) activity","type":"narrow"},{"name":"inhibition of phosphotyrosine histone phosphatase activity","type":"narrow"},{"name":"inhibition of phosphotyrosine phosphatase activity","type":"narrow"},{"name":"inhibition of phosphotyrosine protein phosphatase activity","type":"narrow"},{"name":"inhibition of phosphotyrosylprotein phosphatase activity","type":"narrow"},{"name":"inhibition of protein phosphotyrosine phosphatase activity","type":"narrow"},{"name":"inhibition of protein tyrosine phosphatase activity","type":"narrow"},{"name":"inhibition of protein-tyrosine-phosphatase activity","type":"narrow"},{"name":"inhibition of protein-tyrosine-phosphate phosphohydrolase activity","type":"narrow"},{"name":"inhibition of tyrosine O-phosphate phosphatase activity","type":"narrow"},{"name":"inhibition of tyrosylprotein phosphatase activity","type":"narrow"},{"name":"negative regulation of PPT-phosphatase activity","type":"exact"},{"name":"negative regulation of PTP-phosphatase activity","type":"exact"},{"name":"negative regulation of PTPase activity","type":"exact"},{"name":"negative regulation of [phosphotyrosine]protein phosphatase activity","type":"exact"},{"name":"negative regulation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"exact"},{"name":"negative regulation of phosphotyrosine histone phosphatase activity","type":"exact"},{"name":"negative regulation of phosphotyrosine phosphatase activity","type":"exact"},{"name":"negative regulation of phosphotyrosine protein phosphatase activity","type":"exact"},{"name":"negative regulation of phosphotyrosylprotein phosphatase activity","type":"exact"},{"name":"negative regulation of protein phosphotyrosine phosphatase activity","type":"exact"},{"name":"negative regulation of protein-tyrosine-phosphatase activity","type":"exact"},{"name":"negative regulation of protein-tyrosine-phosphate phosphohydrolase activity","type":"exact"},{"name":"negative regulation of tyrosine O-phosphate phosphatase activity","type":"exact"},{"name":"negative regulation of tyrosylprotein phosphatase activity","type":"exact"}],"termid":"GO:1903614"}


id: PBO:0088991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp12","termid":"PBO:0088991"}


id: GO:0141192
data:
  {"annotated_genes":["SJAG_01352"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93076],"is_not":false,"summary":null,"term":"GO:0141192"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 ATP + H+ = diphosphate + P(1),P(4)-bis(5'-adenosyl)tetraphosphate.","definition_xrefs":["RHEA:34935","PMID:27398309","PMID:16884494","PMID:19710017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016779","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"ATP:ATP adenylyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"adenine triphosphate adenylyltransferase activity","type":"related"}],"termid":"GO:0141192","terms_by_termid":{"GO:0141192":null}}


id: GO:0048498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that determines the orientation of petals with reference to the central axis.","definition_xrefs":["GOC:tb","PMID:10572040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of floral organ orientation","termid":"GO:0048559"},{"relation_name":"part_of","term_name":"petal morphogenesis","termid":"GO:0048446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of petal orientation","termid":"GO:0048498"}


id: PR:O94479
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1919.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane protease (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.12c","synonyms":[{"name":"FXNA-related family protease 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPCC1919.12c","type":"exact"}],"termid":"PR:O94479"}


id: SO:1001188
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is alternately spliced, but encodes only one polypeptide.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"encodes_alternately_spliced_transcripts","termid":"SO:0000463"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encodes_1_polypeptide","synonyms":[{"name":"encodes 1 polypeptide","type":"exact"}],"termid":"SO:1001188"}


id: PBO:0074355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes 3","termid":"PBO:0074355"}


id: PBO:0091245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD binding oxidoreductase, implicated in cellular detoxification","termid":"PBO:0091245"}


id: GO:0009412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heavy metal stimulus. Heavy metals are those metals that can form a coordination bond with a protein; this definition includes the following biologically relevant heavy metals: Cd, Co, Cu, Fe, Hg, Mn, Mo, Ni, V, W, Zn.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete response to heavy metal (obsolete GO:0009412)","synonyms":[{"name":"response to heavy metal","type":"exact"}],"termid":"GO:0009412"}


id: PBO:0071628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 47","termid":"PBO:0071628"}


id: GO:0046815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the viral genome is retained within the capsid during genome cleavage and packaging.","definition_xrefs":["PMID:9696839"],"gene_count":0,"genotype_count":0,"name":"obsolete genome retention in viral capsid (obsolete GO:0046815)","termid":"GO:0046815"}


id: PBO:0030213
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_oxidative_stress","termid":"PBO:0030213"}


id: GO:0047361
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphomannan(n) + GDP-mannose = phosphomannan(n+1) + GMP.","definition_xrefs":["MetaCyc:2.7.8.9-RXN","EC:2.7.8.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016780"}],"interesting_parent_ids":["GO:0016740","GO:0016780","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phosphomannan mannosephosphotransferase activity","synonyms":[{"name":"GDP-mannose:phosphomannan mannose phosphotransferase activity","type":"related"}],"termid":"GO:0047361"}


id: FYPO:0008242
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the nucleus is abnormal during the meiotic cell cycle.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology","termid":"FYPO:0002256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0002403"],"is_obsolete":false,"name":"abnormal nuclear morphology during meiotic cell cycle","termid":"FYPO:0008242"}


id: PBO:0031059
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_long_cells_(obsolete_FYPO:0000318)","termid":"PBO:0031059"}


id: GO:0019534
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a toxin from one side of a membrane to the other. A toxin is a poisonous compound (typically a protein) that is produced by cells or organisms and that can cause disease when introduced into the body or tissues of an organism.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"toxin transmembrane transporter activity","termid":"GO:0019534"}


id: GO:0032079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endodeoxyribonuclease activity, the hydrolysis of ester linkages within deoxyribonucleic acid by creating internal breaks.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endodeoxyribonuclease activity","termid":"GO:0032071"},{"relation_name":"is_a","term_name":"positive regulation of deoxyribonuclease activity","termid":"GO:0032077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"positive regulation of endodeoxyribonuclease activity","synonyms":[{"name":"activation of endodeoxyribonuclease activity","type":"narrow"},{"name":"endodeoxyribonuclease activator","type":"related"},{"name":"stimulation of endodeoxyribonuclease activity","type":"narrow"},{"name":"up regulation of endodeoxyribonuclease activity","type":"exact"},{"name":"up-regulation of endodeoxyribonuclease activity","type":"exact"},{"name":"upregulation of endodeoxyribonuclease activity","type":"exact"}],"termid":"GO:0032079"}


id: PBO:0030686
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_vegetative_growth","termid":"PBO:0030686"}


id: PBO:0004789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA C-acetyltransferase Erg10 (predicted)","termid":"PBO:0004789"}


id: GO:0004565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal, non-reducing beta-D-galactose residues in beta-D-galactosides.","definition_xrefs":["EC:3.2.1.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosidase activity","termid":"GO:0015925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"beta-galactosidase activity","secondary_identifiers":["Reactome:R-HSA-2265534","Reactome:R-HSA-9036061","Reactome:R-HSA-1606312","MetaCyc:3.2.1.23-RXN","Reactome:R-HSA-2090079","Reactome:R-HSA-1605624","MetaCyc:BGALACT-PWY","Reactome:R-HSA-1793217","Reactome:R-HSA-1630306","Reactome:R-HSA-9840795"],"synonyms":[{"name":"beta-D-galactanase activity","type":"related"},{"name":"beta-D-galactoside galactohydrolase activity","type":"related"},{"name":"beta-D-lactosidase activity","type":"related"},{"name":"beta-lactosidase activity","type":"related"},{"name":"exo-(1->4)-beta-D-galactanase activity","type":"related"},{"name":"hydrolact","type":"related"}],"termid":"GO:0004565"}


id: PBO:0062684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily A member 5 pseudogene","termid":"PBO:0062684"}


id: GO:0004535
data:
  {"annotated_genes":["SJAG_00966","SJAG_04407","SJAG_04519","SJAG_02540","SJAG_01836"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89444,103916,109076,111830,112783],"is_not":false,"summary":null,"term":"GO:0004535"}]},"cv_name":"molecular_function","definition":"Catalysis of the exonucleolytic cleavage of poly(A) to 5'-AMP.","definition_xrefs":["EC:3.1.13.4","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-5'-RNA exonuclease activity","termid":"GO:0000175"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00966":null,"SJAG_01836":null,"SJAG_02540":null,"SJAG_04407":null,"SJAG_04519":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0004527","GO:0003824","GO:0003674","GO:0016787","GO:0140098","GO:0016788"],"is_obsolete":false,"name":"poly(A)-specific ribonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.1.13.4-RXN","Reactome:R-HSA-9822335","Reactome:R-HSA-9822311","Reactome:R-HSA-429992","Reactome:R-HSA-429955","Reactome:R-HSA-430021"],"synonyms":[{"name":"2',3'-exoribonuclease activity","type":"related"},{"name":"3'-exoribonuclease activity","type":"related"},{"name":"poly(A)-specific RNase activity","type":"exact"}],"termid":"GO:0004535","terms_by_termid":{"GO:0004535":null}}


id: PBO:0047342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrillin 3","termid":"PBO:0047342"}


id: PBO:0046765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome component 5","termid":"PBO:0046765"}


id: SO:0000952
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An origin of vegetative replication in plasmids and phages.","definition_xrefs":["SO:as"],"direct_ancestors":[{"relation_name":"is_a","term_name":"origin_of_replication","termid":"SO:0000296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oriV","synonyms":[{"name":"origin of vegetative replication","type":"exact"}],"termid":"SO:0000952"}


id: PBO:0088076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-specific protease that cleaves ubiquitin-protein fusions; UBP9 has a paralog, UBP13, that arose from the whole genome duplication","termid":"PBO:0088076"}


id: PBO:0083354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene MET2/YNL277W","termid":"PBO:0083354"}


id: PBO:0056568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucolipin TRP cation channel 3","termid":"PBO:0056568"}


id: PBO:0087244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine-rich, hydrophilic protein; overexpression suppresses growth defects of hap2, hap3, and hap4 mutants; expression is under glucose control; cotranscribed with NAM7 in a cyp1 mutant; ISF1 has a paralog, MBR1, that arose from the whole genome duplication","termid":"PBO:0087244"}


id: FYPO:0005189
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which re-entry into the mitotic cell cycle is abnormal after arrest resulting from hydroxyurea exposure.","definition_xrefs":["PomBase:mah","PMID:19546237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle regulation during cellular response to hydroxyurea","termid":"FYPO:0001933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000298","FYPO:0000631"],"is_obsolete":false,"name":"abnormal re-entry into mitotic cell cycle after arrest in response to hydroxyurea","synonyms":[{"name":"abnormal re-entry into mitotic cell cycle after HU arrest","type":"exact"},{"name":"abnormal re-entry into mitotic cell cycle after arrest in response to HU","type":"exact"},{"name":"abnormal re-entry into mitotic cell cycle after arrest in response to hydroxyurea during vegetative growth","type":"exact"},{"name":"abnormal re-entry into mitotic cell cycle after hydroxyurea-induced arrest","type":"exact"}],"termid":"FYPO:0005189"}


id: PBO:0040048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARPC1A pseudogene 4","termid":"PBO:0040048"}


id: FYPO:0002071
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell has a nucleus in an abnormal location. The normal location of a single nucleus is at the midpoint of the long axis of the cell (during mitotic telophase, daughter nuclei normally move away from the cell division site).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"},{"relation_name":"is_a","term_name":"mislocalized nucleus","termid":"FYPO:0002069"},{"relation_name":"output_of","term_name":"abnormal nucleus positioning during vegetative growth","termid":"FYPO:0001338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"mislocalized nucleus during vegetative growth","synonyms":[{"name":"abnormal nucleus location during vegetative growth","type":"exact"},{"name":"abnormal nucleus position during vegetative growth","type":"exact"},{"name":"displaced nucleus during vegetative growth","type":"exact"},{"name":"mislocalised nucleus during vegetative growth","type":"exact"},{"name":"mislocalized nucleus during mitotic cell cycle","type":"related"},{"name":"misplaced nuclei during vegetative growth","type":"exact"},{"name":"misplaced nucleus during vegetative growth","type":"exact"},{"name":"nuclear displacement during vegetative growth","type":"exact"}],"termid":"FYPO:0002071"}


id: FYPO:0005992
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to P-bodies is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to P-bodies","synonyms":[{"name":"decreased protein localisation to P-bodies","type":"exact"},{"name":"decreased protein localization to P-bodies during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to P-bodies during vegetative growth","type":"exact"},{"name":"decreased protein localization to P-body","type":"exact"},{"name":"decreased protein localization to cytoplasmic P-bodies","type":"exact"},{"name":"reduced protein localization to P-bodies","type":"exact"}],"termid":"FYPO:0005992"}


id: GO:1990051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates the activity of the inactive enzyme protein kinase C.","definition_xrefs":["PMID:3156004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activation of protein kinase activity","termid":"GO:0032147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation of protein kinase C activity","synonyms":[{"name":"PKC activation","type":"exact"},{"name":"protein kinase C activation","type":"exact"}],"termid":"GO:1990051"}


id: GO:1990161
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homohexameric protein complex that possesses DNA helicase activity; functions during DNA replication and repair.","definition_xrefs":["PMID:17947583","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA helicase complex","termid":"GO:0033202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DnaB helicase complex","synonyms":[{"name":"DnaB hexamer","type":"exact"}],"termid":"GO:1990161"}


id: GO:0030427
data:
  {"annotated_genes":["SJAG_00030","SJAG_00667","SJAG_02486","SJAG_02566","SJAG_02104","SJAG_02222","SJAG_04960","SJAG_00514","SJAG_04001","SJAG_02166","SJAG_03748","SJAG_02338","SJAG_05001","SJAG_04982","SJAG_03126","SJAG_04703","SJAG_03915","SJAG_01732","SJAG_02392","SJAG_00185","SJAG_01290","SJAG_04358","SJAG_01189","SJAG_03119","SJAG_00700","SJAG_04522","SJAG_01215","SJAG_04050","SJAG_01794","SJAG_04723","SJAG_04901","SJAG_03486","SJAG_01754","SJAG_03705","SJAG_04624","SJAG_01888","SJAG_02351","SJAG_04100","SJAG_03625","SJAG_03646","SJAG_03637","SJAG_03357","SJAG_03011","SJAG_02924","SJAG_02718","SJAG_04781","SJAG_00938","SJAG_00870","SJAG_01993","SJAG_04566","SJAG_01925","SJAG_00661","SJAG_01943","SJAG_02278","SJAG_03453","SJAG_02511","SJAG_03145","SJAG_02228","SJAG_01388","SJAG_01288","SJAG_02320","SJAG_03596","SJAG_01196","SJAG_03444","SJAG_04666","SJAG_04887","SJAG_00677","SJAG_02916","SJAG_03581","SJAG_02169","SJAG_04058","SJAG_02700","SJAG_04509","SJAG_01171","SJAG_00152","SJAG_02838","SJAG_01114","SJAG_01017","SJAG_00424","SJAG_05285","SJAG_04765"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83924,85894,87616,91899,97835,103165,103739,111985,115048],"is_not":false,"summary":null,"term":"GO:0030427"},{"annotations":[88431,93262,109203,110309,114080,108094,114804,85883,83911,112651,115001,86770,102208,112339,86741,90611,111973],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902716"},{"annotations":[89913,90977,88435,111630,99988,115284,115286,87307,108314,112735,115280,115288,96250,84500,110197,92928,115282,95842,91462,115278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035838"},{"annotations":[115279,115287,115289,115281,115285,115283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001411"},{"annotations":[104198,86868,98030,98031,115804,112344,110777,91412,104259,90058,89860,96225,88530,91331,84313,95628,107457,85124],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990819"},{"annotations":[108016,85125,89508,106331,93787,114808,86746,88531,94969,92426,105192,91413,83920,110478,85890,103284,92929,97281,104974,88601,91332,99355,111980,86701,93986,102214,102975,103007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043332"},{"annotations":[106332,92427],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070867"},{"annotations":[87605,108924,85463,92933,110535,95399,106898,111982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035841"},{"annotations":[106900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035842"},{"annotations":[110536,84794,100760,108926,92934,99171,95400,110201,85465,87606,102215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035840"},{"annotations":[95728],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902929"}]},"cv_name":"cellular_component","definition":"Any part of a cell where non-isotropic growth takes place.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical 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of polarized growth","references_by_uniquename":{"GO_REF:0000107":null,"PMID:30726171":null,"PMID:36148799":null},"secondary_identifiers":["GO:0000134","GO:0030483"],"termid":"GO:0030427","terms_by_termid":{"GO:0001411":null,"GO:0030427":null,"GO:0035838":null,"GO:0035840":null,"GO:0035841":null,"GO:0035842":null,"GO:0043332":null,"GO:0070867":null,"GO:1902716":null,"GO:1902929":null,"GO:1990819":null}}


id: GO:0044168
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The irregular network of unit membranes, visible only by electron microscopy, that occurs in the host cell cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The host rough ER has ribosomes adhering to the outer surface.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell endoplasmic reticulum","termid":"GO:0044165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell rough endoplasmic reticulum","synonyms":[{"name":"host rough endoplasmic reticulum","type":"exact"}],"termid":"GO:0044168"}


id: PBO:0006200
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_localizes","termid":"PBO:0006200"}


id: PR:O74858
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lysine--tRNA ligase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.08","secondary_identifiers":["UniProtKB:O74858"],"synonyms":[{"name":"LysRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lysS","type":"exact"},{"name":"lysyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74858"}


id: PBO:0068498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 83, pseudogene","termid":"PBO:0068498"}


id: GO:0030158
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a beta-D-xylosyl residue from UDP-D-xylose to the serine hydroxyl group of an acceptor protein substrate.","definition_xrefs":["EC:2.4.2.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-xylosyltransferase activity","termid":"GO:0035252"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"protein xylosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-1878002","MetaCyc:2.4.2.26-RXN","RHEA:50192"],"synonyms":[{"name":"UDP-D-xylose:core protein beta-D-xylosyltransferase activity","type":"related"},{"name":"UDP-D-xylose:core protein xylosyltransferase activity","type":"related"},{"name":"UDP-D-xylose:protein beta-D-xylosyltransferase activity","type":"related"},{"name":"UDP-D-xylose:proteoglycan core protein beta-D-xylosyltransferase activity","type":"related"},{"name":"UDP-xylose-core protein beta-D-xylosyltransferase activity","type":"related"},{"name":"peptide O-xylosyltransferase activity","type":"exact"},{"name":"uridine diphosphoxylose-core protein beta-xylosyltransferase activity","type":"related"},{"name":"uridine diphosphoxylose-protein xylosyltransferase activity","type":"related"}],"termid":"GO:0030158"}


id: MOD:01427
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00819. Remap to MOD:00819.","definition_xrefs":["PubMed:18688235"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01427 2-aminobutanoic acid (Abu) (obsolete MOD:01427)","synonyms":[{"name":"Abu","type":"exact"}],"termid":"MOD:01427"}


id: GO:0018338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a protein amino acid by cinnamylation.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein amino acid cinnamylation (obsolete GO:0018338)","synonyms":[{"name":"protein amino acid cinnamylation","type":"exact"}],"termid":"GO:0018338"}


id: PR:Q8J1M8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1952.04c gene.","definition_xrefs":["UniProtKB:Q8J1M8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0768 protein C1952.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.04c","synonyms":[{"name":"Spom972h-SPAC1952.04c","type":"exact"}],"termid":"PR:Q8J1M8"}


id: PBO:0071555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 20","termid":"PBO:0071555"}


id: PBO:0076286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spleen associated tyrosine kinase","termid":"PBO:0076286"}


id: PBO:0005160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Brl2","termid":"PBO:0005160"}


id: PBO:0039934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF38 intronic transcript 1","termid":"PBO:0039934"}


id: PBO:0067379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 481, pseudogene","termid":"PBO:0067379"}


id: FYPO:0005908
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more messenger RNAs that are normally expressed during a cellular response to stress measured in a cell is lower than normal (i.e. lower than observed in wild-type cells during vegetative growth).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"altered level of stress responsive gene mRNA during vegetative growth","termid":"FYPO:0004363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"decreased level of stress responsive gene mRNA during vegetative growth","synonyms":[{"name":"decreased level of cellular response to stress gene mRNA during vegetative growth","type":"exact"},{"name":"decreased level of stress responsive gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of stress responsive gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of stress responsive gene transcripts during vegetative growth","type":"exact"},{"name":"decreased mRNA level of stress responsive genes during vegetative growth","type":"exact"},{"name":"decreased stress responsive gene mRNA accumulation during vegetative growth","type":"related"},{"name":"reduced level of stress responsive gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0005908"}


id: GO:0046568
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methylbutanol + NAD(P)+ = 3-methylbutanal + NAD(P)H + H+. 3-methylbutanal is also known as isovaleraldehyde.","definition_xrefs":["EC:1.1.1.265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase [NAD(P)+] activity","termid":"GO:0018455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-methylbutanal reductase [NAD(P)H] activity","secondary_identifiers":["MetaCyc:1.1.1.265-RXN"],"synonyms":[{"name":"3-methylbutanal reductase [NAD(P)] activity","type":"related"},{"name":"3-methylbutanol:NAD(P) oxidoreductase activity","type":"exact"},{"name":"3-methylbutyraldehyde reductase activity","type":"exact"},{"name":"isoamyl alcohol oxidase activity","type":"exact"}],"termid":"GO:0046568"}


id: PBO:0070131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 45 pseudogene","termid":"PBO:0070131"}


id: PR:Q9URY5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A flavohemoprotein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavohemoprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC869.02c","secondary_identifiers":["UniProtKB:Q9URY5"],"synonyms":[{"name":"Flavohemoglobin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NO oxygenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NOD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-hmp","type":"exact"},{"name":"hemoglobin-like protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"nitric oxide dioxygenase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9URY5"}


id: GO:0030476
data:
  {"annotated_genes":["SJAG_04238","SJAG_04868","SJAG_00974","SJAG_01321","SJAG_03013"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84248,84738,86277,87791,113963],"is_not":false,"summary":null,"term":"GO:0030476"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an ascospore wall. During sporulation in Ascomycota, each ascospore nucleus becomes surrounded by a specialized spore wall, formed by deposition of spore wall components in the lumenal space between the outer and inner leaflets of the prospore membrane. An example of this process is found in Saccharomyces cerevisiae.","definition_xrefs":["GOC:mcc","PMID:14702385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"spore wall assembly","termid":"GO:0042244"},{"relation_name":"is_a","term_name":"fungal-type cell wall assembly","termid":"GO:0071940"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"ascospore wall biogenesis","termid":"GO:0070591"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00974":null,"SJAG_01321":null,"SJAG_03013":null,"SJAG_04238":null,"SJAG_04868":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030437"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0007049","GO:0030437","GO:0044085"],"is_obsolete":false,"name":"ascospore wall assembly","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0007152"],"synonyms":[{"name":"spore wall assembly","type":"broad"}],"termid":"GO:0030476","terms_by_termid":{"GO:0030476":null}}


id: PBO:0042209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin J like","termid":"PBO:0042209"}


id: GO:0005048
data:
  {"annotated_genes":["SJAG_01840","SJAG_04996","SJAG_01013","SJAG_00962","SJAG_03729","SJAG_00326","SJAG_03299","SJAG_02208","SJAG_03781","SJAG_00840","SJAG_03959","SJAG_04411","SJAG_00702","SJAG_01759","SJAG_01909","SJAG_03684","SJAG_03662","SJAG_02998","SJAG_01488","SJAG_02330","SJAG_02418","SJAG_01640","SJAG_03358","SJAG_01282"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100183,102289,105474,112823],"is_not":false,"summary":null,"term":"GO:0005048"},{"annotations":[87653,111294,112102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030942"},{"annotations":[109789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045015"},{"annotations":[103422,95623,95511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030943"},{"annotations":[85045,87951,99489,92183,114880,90033,89470,99784,111998,91818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008139"},{"annotations":[108003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005052"},{"annotations":[86463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005053"},{"annotations":[86455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033328"}]},"cv_name":"molecular_function","definition":"Binding to a signal sequence, a specific peptide sequence found on protein precursors or mature proteins that dictates where the mature protein is localized.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide binding","termid":"GO:0042277"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00326":null,"SJAG_00702":null,"SJAG_00840":null,"SJAG_00962":null,"SJAG_01013":null,"SJAG_01282":null,"SJAG_01488":null,"SJAG_01640":null,"SJAG_01759":null,"SJAG_01840":null,"SJAG_01909":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02418":null,"SJAG_02998":null,"SJAG_03299":null,"SJAG_03358":null,"SJAG_03662":null,"SJAG_03684":null,"SJAG_03729":null,"SJAG_03781":null,"SJAG_03959":null,"SJAG_04411":null,"SJAG_04996":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"signal sequence binding","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0008249"],"synonyms":[{"name":"leader sequence binding","type":"narrow"},{"name":"protein signal sequence binding","type":"narrow"},{"name":"signal sequence receptor","type":"narrow"}],"termid":"GO:0005048","terms_by_termid":{"GO:0005048":null,"GO:0005052":null,"GO:0005053":null,"GO:0008139":null,"GO:0030942":null,"GO:0030943":null,"GO:0033328":null,"GO:0045015":null}}


id: GO:0050842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of copper into a protein by L-cysteinyl copper sulfido molybdopterin cytosine dinucleotide.","definition_xrefs":["RESID:AA0355"],"gene_count":0,"genotype_count":0,"name":"obsolete copper incorporation via L-cysteinyl copper sulfido molybdopterin cytosine dinucleotide (obsolete GO:0050842)","termid":"GO:0050842"}


id: PBO:0089542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, membrane-tethered Sre2","termid":"PBO:0089542"}


id: PBO:0043884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich with EGF like domains 1","termid":"PBO:0043884"}


id: GO:1902118
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to calcidiol.","definition_xrefs":["GOC:TermGenie","PMID:11799400","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D3 vitamins binding","termid":"GO:1902271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"calcidiol binding","synonyms":[{"name":"25(OH)D3 binding","type":"exact"},{"name":"25-hydroxycholecalciferol binding","type":"exact"},{"name":"25-hydroxyvitamin D3 binding","type":"exact"},{"name":"25OHD3 binding","type":"exact"},{"name":"calcifediol binding","type":"exact"}],"termid":"GO:1902118"}


id: PBO:0074920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 89","termid":"PBO:0074920"}


id: FYPO:0003133
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of galactomannan measured in the cell wall is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide absent from cell","termid":"FYPO:0001209"},{"relation_name":"is_a","term_name":"decreased cell wall galactomannan level","termid":"FYPO:0002265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0002946","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"galactomannan absent from cell wall","synonyms":[{"name":"galactomannan absent from cell surface","type":"related"},{"name":"galactomannan absent from cell wall during mitotic cell cycle","type":"related"},{"name":"galactomannan absent from cell wall during vegetative growth","type":"exact"}],"termid":"FYPO:0003133"}


id: GO:0016099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of monoterpenoid compounds, terpenoids having a C10 skeleton.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpenoid metabolic process","termid":"GO:0016098"},{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"monoterpenoid biosynthetic process","secondary_identifiers":["MetaCyc:PWY-3041"],"synonyms":[{"name":"monoterpenoid anabolism","type":"exact"},{"name":"monoterpenoid biosynthesis","type":"exact"},{"name":"monoterpenoid formation","type":"exact"},{"name":"monoterpenoid synthesis","type":"exact"}],"termid":"GO:0016099"}


id: FYECO:0000138
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing glycerol as the sole carbon source, yeast extract and other components. The concentration of glycerol is typically around 2-3% and supplemented with trace amounts of another carbon source (e.g. glucose).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol YE","secondary_identifiers":["FYECO:0000083"],"synonyms":[{"name":"glycerol rich medium","type":"broad"},{"name":"glycerol sole carbon source YE","type":"related"},{"name":"glycerol sole carbon source rich medium","type":"exact"},{"name":"non-fermentable glycerol sole carbon source rich medium","type":"exact"},{"name":"nonfermentable glycerol sole carbon source rich medium","type":"related"}],"termid":"FYECO:0000138"}


id: GO:0062174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of brexanolone.","definition_xrefs":["PMID:24390875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"brexanolone metabolic process","termid":"GO:0062173"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"brexanolone biosynthetic process","synonyms":[{"name":"allopregnanolone anabolism","type":"exact"},{"name":"allopregnanolone biosynthesis","type":"exact"},{"name":"allopregnanolone biosynthetic process","type":"exact"},{"name":"allopregnanolone synthesis","type":"exact"},{"name":"allotetrahydroprogesterone anabolism","type":"exact"},{"name":"allotetrahydroprogesterone biosynthesis","type":"exact"},{"name":"allotetrahydroprogesterone biosynthetic process","type":"exact"},{"name":"allotetrahydroprogesterone synthesis","type":"exact"},{"name":"brexanolone anabolism","type":"exact"},{"name":"brexanolone biosynthesis","type":"exact"},{"name":"brexanolone synthesis","type":"exact"}],"termid":"GO:0062174"}


id: GO:0006398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any mRNA 3'-end processing that involves the binding to and cleavage of a stem-loop structure. For example, histone mRNAs contain a highly conserved stem-loop sequence at the 3' end of the mRNA with a 6 base pairs (bp) stem and a 4-nt loop. The mRNA is cleaved between these two elements, after the fourth or fifth nucleotide, which is typically an adenosine.","definition_xrefs":["GOC:mah","PMID:17998288","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone mRNA metabolic process","termid":"GO:0008334"},{"relation_name":"is_a","term_name":"mRNA 3'-end processing","termid":"GO:0031124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"mRNA 3'-end processing by stem-loop binding and cleavage","synonyms":[{"name":"histone mRNA 3' end processing","type":"narrow"}],"termid":"GO:0006398"}


id: PBO:0049003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase 1 like","termid":"PBO:0049003"}


id: GO:1904431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of t-circle formation.","definition_xrefs":["GOC:BHF","PMID:22579284","GOC:TermGenie","GOC:BHF_telomere","GOC:nc","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of telomere maintenance","termid":"GO:0032206"},{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"regulation of t-circle formation","termid":"GO:1904429"},{"relation_name":"positively_regulates","term_name":"t-circle formation","termid":"GO:0090656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"positively_regulates","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0044085","GO:0032200","GO:0008150"],"is_obsolete":false,"name":"positive regulation of t-circle formation","synonyms":[{"name":"activation of t-circle formation","type":"narrow"},{"name":"activation of telomeric circle formation","type":"narrow"},{"name":"positive regulation of telomeric circle formation","type":"exact"},{"name":"up regulation of t-circle formation","type":"exact"},{"name":"up regulation of telomeric circle formation","type":"exact"},{"name":"up-regulation of t-circle formation","type":"exact"},{"name":"up-regulation of telomeric circle formation","type":"exact"},{"name":"upregulation of t-circle formation","type":"exact"},{"name":"upregulation of telomeric circle formation","type":"exact"}],"termid":"GO:1904431"}


id: PBO:0001689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit Bet3 (predicted)","termid":"PBO:0001689"}


id: GO:0032675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-6 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-6 production","termid":"GO:0032635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-6 production","secondary_identifiers":["GO:0045408"],"synonyms":[{"name":"regulation of IL-6 production","type":"exact"},{"name":"regulation of interleukin-6 biosynthetic process","type":"narrow"}],"termid":"GO:0032675"}


id: PBO:0059460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSC antisense RNA 1","termid":"PBO:0059460"}


id: FYPO:0003665
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of RNA pyrophosphohydrolase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000257"],"is_obsolete":false,"name":"normal RNA pyrophosphohydrolase activity","termid":"FYPO:0003665"}


id: GO:0052038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts the directed movement of substances within the cell of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"},{"relation_name":"regulates","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host intracellular transport","synonyms":[{"name":"modulation by symbiont of host intracellular transport","type":"broad"},{"name":"modulation of host intracellular trafficking","type":"exact"}],"termid":"GO:0052038"}


id: GO:0043411
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to myopalladin, a myofibrillar protein with titin-like Ig domains.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete myopalladin binding (obsolete GO:0043411)","synonyms":[{"name":"myopalladin binding","type":"exact"}],"termid":"GO:0043411"}


id: PATO:0001533
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color pattern inhering in a bearer by virtue of bearer's having two or more hues or degrees of saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color pattern","termid":"PATO:0000019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multi-colored","synonyms":[{"name":"variegated","type":"exact"}],"termid":"PATO:0001533"}


id: GO:0014733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which skeletal muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. These adaptive events occur in both muscle fibers and associated structures (motoneurons and capillaries), and they involve alterations in regulatory mechanisms, contractile properties and metabolic capacities.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle adaptation","termid":"GO:0043502"},{"relation_name":"regulates","term_name":"skeletal muscle adaptation","termid":"GO:0043501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle adaptation","synonyms":[{"name":"regulation of skeletal muscle plasticity","type":"related"}],"termid":"GO:0014733"}


id: PBO:0087347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sphingoid long-chain base (LCB) efflux transporter; integral membrane transporter that localizes to the plasma membrane and may transport long chain bases (LCBs) from the cytoplasmic side toward the extracytoplasmic side of the membrane; role in glycerophospholipid translocation; suppressor of the sphingoid LCB sensitivity of an LCB-lyase mutation","termid":"PBO:0087347"}


id: GO:0008954
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidoglycan synthetase activity (obsolete GO:0008954)","synonyms":[{"name":"peptidoglycan synthetase activity","type":"exact"}],"termid":"GO:0008954"}


id: PBO:0071345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 3","termid":"PBO:0071345"}


id: GO:0098915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which ions are transported across a membrane such that the ventricular cardiomyocyte membrane potential changes in the direction from the positive membrane potential at the peak of the action potential towards the negative resting potential.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane repolarization during cardiac muscle cell action potential","termid":"GO:0086013"},{"relation_name":"is_a","term_name":"ventricular cardiac muscle cell membrane repolarization","termid":"GO:0099625"},{"relation_name":"part_of","term_name":"ventricular cardiac muscle cell action potential","termid":"GO:0086005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane repolarization during ventricular cardiac muscle cell action potential","synonyms":[{"name":"electrocardiogram T wave","type":"related"},{"name":"regulation of ventricular cardiac muscle repolarization","type":"related"},{"name":"ventricular repolarization","type":"related"}],"termid":"GO:0098915"}


id: GO:0102132
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NADP + a 3R-hydroxypimeloyl-[acp] methyl ester = NADPH + H+ + a 3-oxo-pimeloyl-[acp] methyl ester.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxo-pimeloyl-[acp] methyl ester reductase activity (obsolete GO:0102132)","termid":"GO:0102132"}


id: FYPO:0006862
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which an RNA that is not normally found in the cytoplasm is observed there.","definition_xrefs":["PMID:29424342","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"mislocalized RNA during vegetative growth","termid":"FYPO:0006861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"RNA mislocalized to cytoplasm during vegetative growth","synonyms":[{"name":"RNA mislocalised to cytoplasm during vegetative growth","type":"exact"},{"name":"RNA mislocalized to cytoplasm during mitotic cell cycle","type":"related"},{"name":"ectopic RNA localization to cytoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0006862"}


id: PBO:0068988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 232, pseudogene","termid":"PBO:0068988"}


id: FYPO:0004294
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell has a septum in an abnormal location when the population in which the cell is found is in stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized septum","termid":"FYPO:0004293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"mislocalized septum in stationary phase","synonyms":[{"name":"abnormal septum localization in stationary phase","type":"related"},{"name":"abnormal septum location in stationary phase","type":"exact"},{"name":"abnormal septum position in stationary phase","type":"exact"},{"name":"abnormal septum positioning in stationary phase","type":"related"},{"name":"asymmetric septum in stationary phase","type":"exact"},{"name":"asymmetrically located septum in stationary phase","type":"exact"},{"name":"mislocalised septum in stationary phase","type":"exact"},{"name":"misplaced septum in stationary phase","type":"exact"}],"termid":"FYPO:0004294"}


id: PBO:0083605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a functional protein; overlaps 3' end of essential RPL28 gene encoding a large subunit ribosomal protein","termid":"PBO:0083605"}


id: GO:0000410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of galactose that leads to a decrease in the frequency, rate, or extent of transcription of specific genes involved in the metabolism of other carbon sources. Carbon catabolite repression is a mechanism of genetic regulation which the accumulation of catabolites of one substance in the cell represses the formation of enzymes that contribute to the catabolism of other substances.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by galactose","termid":"GO:0000409"},{"relation_name":"is_a","term_name":"carbon catabolite repression of transcription","termid":"GO:0045013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"carbon catabolite repression of transcription by galactose","synonyms":[{"name":"down regulation of transcription by galactose","type":"exact"},{"name":"down-regulation of transcription by galactose","type":"exact"},{"name":"downregulation of transcription by galactose","type":"exact"},{"name":"inhibition of transcription by galactose","type":"narrow"}],"termid":"GO:0000410"}


id: PBO:0053086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 1D","termid":"PBO:0053086"}


id: FYPO:0008166
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome does not occur during prometaphase of mitosis.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to kinetochore during mitotic prometaphase","termid":"FYPO:0008165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to kinetochore during mitotic prometaphase","termid":"FYPO:0008166"}


id: PATO:0001099
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001099 relative force (obsolete PATO:0001099)","termid":"PATO:0001099"}


id: PBO:0058875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10226","termid":"PBO:0058875"}


id: PBO:0080598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 31","termid":"PBO:0080598"}


id: PBO:0075355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOWAHC pseudogene 3","termid":"PBO:0075355"}


id: PBO:0045883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 delta pseudogene 7","termid":"PBO:0045883"}


id: FYPO:0008065
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the frequency of occurrence of ascospore formation is decreased after phosphate removal.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased sporulation frequency","termid":"FYPO:0000584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"decreased sporulation frequency during phosphate starvation","termid":"FYPO:0008065"}


id: PBO:0090802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPA1 sodium ion/proton antiporter","termid":"PBO:0090802"}


id: SO:0001487
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The status of a whole genome sequence, where overall coverage represents at least 90 percent of the genome.","definition_xrefs":["DOI:10.1126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"whole_genome_sequence_status","termid":"SO:0001499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high_quality_draft","synonyms":[{"name":"high quality draft","type":"exact"}],"termid":"SO:0001487"}


id: PBO:0028077
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete_mitotic_sister_chromatid_segregation","termid":"PBO:0028077"}


id: PR:O60159
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An H(+)/Cl(-) exchange transporter 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anion/proton exchange transporter C19C7.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C7.11","secondary_identifiers":["UniProtKB:O60159"],"synonyms":[{"name":"Spom972h-CLCN3","type":"exact"}],"termid":"PR:O60159"}


id: PBO:0013113
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ortholog of G4-Associated protein","termid":"PBO:0013113"}


id: PBO:0069607
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 884, pseudogene","termid":"PBO:0069607"}


id: RO:0002158
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  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"two individual entities d1 and d2 stand in a shares_ancestor_with relation if and only if there exists some a such that d1 derived_by_descent_from a and d2 derived_by_descent_from a.","direct_ancestors":[{"relation_name":"is_a","term_name":"evolutionarily_related_to","termid":"RO:0002320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shares_ancestor_with","termid":"RO:0002158"}


id: PBO:0072458
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 22","termid":"PBO:0072458"}


id: GO:0045098
data:
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id: PBO:0004421
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin-dependent protein kinase/CDK-activating kinase Mcs6","termid":"PBO:0004421"}


id: FYECO:0000288
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id: GO:0018260
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id: PR:O59682
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id: GO:1901463
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id: PBO:0057760
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id: GO:0050204
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id: GO:0005198
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AG_06110":null,"SJAG_06253":null,"SJAG_06612":null,"SJAG_07009":null,"SJAG_07013":null,"SJAG_07014":null,"SJAG_MIT15":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"structural molecule activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0005198","terms_by_termid":{"GO:0003735":null,"GO:0005198":null,"GO:0005200":null,"GO:0017056":null,"GO:0030527":null}}


id: FYPO:0004337
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitochondrion does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"},{"relation_name":"is_a","term_name":"abnormal protein localization to mitochondrion","termid":"FYPO:0004336"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to mitochondrion","synonyms":[{"name":"abolished protein localisation to mitochondrion","type":"exact"},{"name":"abolished protein localization to mitochondrion during mitotic cell cycle","type":"related"},{"name":"protein absent from mitochondrion","type":"related"},{"name":"protein localization to mitochondrion abolished","type":"exact"},{"name":"protein localization to mitochondrion abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0004337"}


id: GO:0034624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The aggregation, arrangement and bonding together of strand exchange proteins (recombinases) into higher order oligomers on single-stranded DNA, involved in the conversion of the mating-type locus from one allele to another.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA recombinase assembly involved in gene conversion at mating-type locus (obsolete GO:0034624)","termid":"GO:0034624"}


id: PR:Q09901
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gto2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized family 31 glucosidase C30D11.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30D11.01c","synonyms":[{"name":"Spom972h-gto2","type":"exact"}],"termid":"PR:Q09901"}


id: PATO:0000740
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000740 relative enzyme function value (obsolete PATO:0000740)","termid":"PATO:0000740"}


id: PBO:0040311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit alpha pseudogene 3","termid":"PBO:0040311"}


id: PBO:0011114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin-tyrosine ligase Pby1 (predicted)","termid":"PBO:0011114"}


id: PBO:0028147
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_nucleolus","termid":"PBO:0028147"}


id: PBO:0061024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein interacting with the FHA domain of MKI67 pseudogene 7","termid":"PBO:0061024"}


id: PBO:0029578
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_reactive_oxygen_species_level_in_stationary_phase","termid":"PBO:0029578"}


id: GO:0170046
data:
  {"annotated_genes":["SJAG_04984"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96323],"is_not":false,"summary":null,"term":"GO:0170046"}]},"cv_name":"biological_process","definition":"The process in which isopentenyl pyrophosphate is transported across a membrane into the mitochondrion.","definition_xrefs":["PMID:37813972","GOC:ew"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"isopentenyl pyrophosphate import into mitochondrion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0170046","terms_by_termid":{"GO:0170046":null}}


id: GO:1903617
data:
  {"annotated_genes":["SJAG_02392","SJAG_01787","SJAG_00845","SJAG_02838"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86800,91908,99818,106906,115592],"is_not":false,"summary":null,"term":"GO:1903617"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic cytokinesis, division site positioning.","definition_xrefs":["PMID:21246752","PMID:9852154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cytokinesis, division site positioning","termid":"GO:1902472"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cytokinetic process","termid":"GO:1903438"},{"relation_name":"is_a","term_name":"positive regulation of cytokinesis, site selection","termid":"GO:2000076"},{"relation_name":"positively_regulates","term_name":"mitotic cytokinesis, division site positioning","termid":"GO:1902408"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00845":null,"SJAG_01787":null,"SJAG_02392":null,"SJAG_02838":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000281","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of mitotic cytokinesis, division site positioning","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null},"synonyms":[{"name":"positive regulation of mitotic cytokinesis, site selection","type":"exact"}],"termid":"GO:1903617","terms_by_termid":{"GO:1903617":null}}


id: PBO:0069447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 712, pseudogene","termid":"PBO:0069447"}


id: FYPO:0006612
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is decreased at sequences that cause RNA polymerase to terminate transcription.","definition_xrefs":["PomBase:mah","SO:0002213","PMID:29899453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to chromatin at transcription termination site","synonyms":[{"name":"decreased protein localisation to chromatin at transcription termination site","type":"exact"},{"name":"decreased protein localization to chromatin at transcription termination signal","type":"exact"},{"name":"decreased protein localization to chromatin at transcription termination site during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at transcription termination site during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at transcription termination site","type":"exact"}],"termid":"FYPO:0006612"}


id: GO:0015387
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: K+(out) + H+(out) = K+(in) + H+(in).","definition_xrefs":["TC:2.A.38.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium ion transmembrane transporter activity","termid":"GO:0015079"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"potassium:proton symporter activity","secondary_identifiers":["MetaCyc:TRANS-RXN-3","RHEA:28490"],"synonyms":[{"name":"potassium:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015387"}


id: GO:0140247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a protein at a presynapse.","definition_xrefs":["PMID:27764673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein catabolic process at synapse","termid":"GO:0140246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"protein catabolic process at presynapse","termid":"GO:0140247"}


id: PBO:0074850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 38C","termid":"PBO:0074850"}


id: PBO:0085504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; has an extraribosomal function in regulation of RPS28B, in which Rps28Ap binds to a decapping complex via Edc3p, which then binds to RPS28B mRNA leading to its decapping and degradation; homologous to mammalian ribosomal protein S28, no bacterial homolog; RPS28A has a paralog, RPS28B, that arose from the whole genome duplication","termid":"PBO:0085504"}


id: MOD:01482
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a calcium atom or a cluster containing calcium for hydrogen atoms, or that coordinates a calcium ion.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal or metal cluster containing modified residue","termid":"MOD:00698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium containing modified residue","synonyms":[{"name":"CaRes","type":"exact"}],"termid":"MOD:01482"}


id: PBO:0053743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 970","termid":"PBO:0053743"}


id: PBO:0083512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF ERG7/YHR072W","termid":"PBO:0083512"}


id: PR:Q9C100
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein O-mannosyl-transferase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01379","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate-mannose--protein mannosyltransferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1E7.09","secondary_identifiers":["UniProtKB:Q9C100"],"synonyms":[{"name":"Spom972h-POMT2","type":"exact"}],"termid":"PR:Q9C100"}


id: GO:0019468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of nopaline (N-(I-carboxy-4-guanidinobutyl)glutamic acid), a rare amino-acid derivative.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete nopaline catabolic process (obsolete GO:0019468)","synonyms":[{"name":"nopaline breakdown","type":"exact"},{"name":"nopaline catabolism","type":"exact"},{"name":"nopaline degradation","type":"exact"}],"termid":"GO:0019468"}


id: PBO:0028111
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_bis(5'-adenosyl)-hexaphosphatase_activity","termid":"PBO:0028111"}


id: PBO:0089951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glutamyl-tRNA ligase Mse1","termid":"PBO:0089951"}


id: PBO:0065270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 32","termid":"PBO:0065270"}


id: PBO:0052549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell lectin like receptor C2","termid":"PBO:0052549"}


id: GO:0140546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions triggered in response to the presence of a symbiont that act to protect or prevent damage to the host.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response to other organism","termid":"GO:0098542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to symbiont","termid":"GO:0140546"}


id: GO:1901402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tetrapyrrole metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of tetrapyrrole metabolic process","termid":"GO:1901401"},{"relation_name":"negatively_regulates","term_name":"tetrapyrrole metabolic process","termid":"GO:0033013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"negatively_regulates","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"negative regulation of tetrapyrrole metabolic process","synonyms":[{"name":"down regulation of tetrapyrrole metabolic process","type":"exact"},{"name":"down regulation of tetrapyrrole metabolism","type":"exact"},{"name":"down-regulation of tetrapyrrole metabolic process","type":"exact"},{"name":"down-regulation of tetrapyrrole metabolism","type":"exact"},{"name":"downregulation of tetrapyrrole metabolic process","type":"exact"},{"name":"downregulation of tetrapyrrole metabolism","type":"exact"},{"name":"inhibition of tetrapyrrole metabolic process","type":"narrow"},{"name":"inhibition of tetrapyrrole metabolism","type":"exact"},{"name":"negative regulation of tetrapyrrole metabolism","type":"exact"}],"termid":"GO:1901402"}


id: GO:0048023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of the chemical reactions and pathways resulting in the formation of melanin.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of melanin biosynthetic process","termid":"GO:0048021"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"positively_regulates","term_name":"melanin biosynthetic process","termid":"GO:0042438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"positive regulation of melanin biosynthetic process","synonyms":[{"name":"activation of melanin biosynthetic process","type":"narrow"},{"name":"positive regulation of melanin anabolism","type":"exact"},{"name":"positive regulation of melanin biosynthesis","type":"exact"},{"name":"positive regulation of melanin formation","type":"exact"},{"name":"positive regulation of melanin synthesis","type":"exact"},{"name":"stimulation of melanin biosynthetic process","type":"narrow"},{"name":"up regulation of melanin biosynthetic process","type":"exact"},{"name":"up-regulation of melanin biosynthetic process","type":"exact"},{"name":"upregulation of melanin biosynthetic process","type":"exact"}],"termid":"GO:0048023"}


id: PR:O60125
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bag101 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAG family molecular chaperone regulator 1A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.11c","synonyms":[{"name":"BAG-1A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-bag101","type":"exact"}],"termid":"PR:O60125"}


id: FYPO:0000503
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic recombination is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal mitotic recombination","synonyms":[{"name":"mitotic recombination: normal","type":"related"},{"name":"normal mitotic recombination during mitotic cell cycle","type":"related"},{"name":"normal mitotic recombination during vegetative growth","type":"exact"}],"termid":"FYPO:0000503"}


id: PBO:0000783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-glucosidase (predicted)","termid":"PBO:0000783"}


id: GO:0018549
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methanethiol + O2 + H2O = formaldehyde + hydrogen sulfide + hydrogen peroxide.","definition_xrefs":["EC:1.8.3.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor","termid":"GO:0016670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"methanethiol oxidase activity","secondary_identifiers":["RHEA:11812","UM-BBD_reactionID:r0209","MetaCyc:METHANETHIOL-OXIDASE-RXN"],"synonyms":[{"name":"(MM)-oxidase activity","type":"related"},{"name":"MT-oxidase activity","type":"related"},{"name":"methanethiol:oxygen oxidoreductase activity","type":"related"},{"name":"methyl mercaptan oxidase activity","type":"related"},{"name":"methylmercaptan oxidase activity","type":"related"}],"termid":"GO:0018549"}


id: GO:0051010
data:
  {"annotated_genes":["SJAG_03540","SJAG_02624","SJAG_02040","SJAG_02045"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64938,67557,69534,78635],"is_not":false,"summary":null,"term":"GO:0051010"}]},"cv_name":"molecular_function","definition":"Binding to the plus end of a microtubule.","definition_xrefs":["PMID:14614826","GOC:ai","PMID:14557818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule binding","termid":"GO:0008017"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02040":null,"SJAG_02045":null,"SJAG_02624":null,"SJAG_03540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008017"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0005515","GO:0008092","GO:0008017","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"microtubule plus-end binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0051010","terms_by_termid":{"GO:0051010":null}}


id: PBO:0052754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 46","termid":"PBO:0052754"}


id: GO:0052194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of an organism or motile cell on or near its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete movement on or near symbiont (obsolete GO:0052194)","termid":"GO:0052194"}


id: GO:0120163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of cold-induced thermogenesis.","definition_xrefs":["PMID:27876809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of cold-induced thermogenesis","termid":"GO:0120161"},{"relation_name":"negatively_regulates","term_name":"cold-induced thermogenesis","termid":"GO:0106106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cold-induced thermogenesis","synonyms":[{"name":"negative regulation of CIT","type":"related"}],"termid":"GO:0120163"}


id: PBO:0038354
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_effector_activity","termid":"PBO:0038354"}


id: GO:0034809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: benzo(a)pyrene-cis-4,5-dihydrodiol = 4,5-dihydroxybenzo(a)pyrene + H2.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete benzo(a)pyrene-cis-4,5-dihydrodiol dehydrogenase activity (obsolete GO:0034809)","termid":"GO:0034809"}


id: PBO:0071235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 76","termid":"PBO:0071235"}


id: GO:0043317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of cytotoxic T cell degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell mediated cytotoxicity","termid":"GO:0001914"},{"relation_name":"is_a","term_name":"regulation of leukocyte degranulation","termid":"GO:0043300"},{"relation_name":"regulates","term_name":"cytotoxic T cell degranulation","termid":"GO:0043316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of cytotoxic T cell degranulation","synonyms":[{"name":"regulation of cytotoxic T cell granule exocytosis","type":"exact"},{"name":"regulation of cytotoxic T lymphocyte degranulation","type":"exact"},{"name":"regulation of cytotoxic T lymphocyte granule exocytosis","type":"exact"},{"name":"regulation of cytotoxic T-cell degranulation","type":"exact"},{"name":"regulation of cytotoxic T-cell granule exocytosis","type":"exact"},{"name":"regulation of cytotoxic T-lymphocyte degranulation","type":"exact"},{"name":"regulation of cytotoxic T-lymphocyte granule exocytosis","type":"exact"}],"termid":"GO:0043317"}


id: PBO:0067027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 40, pseudogene","termid":"PBO:0067027"}


id: GO:0035122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the embryo, by which the anatomical structures of the medial fin are generated and organized. Medial fins are unpaired fins of fish, usually located dorsomedially or ventromedially and primarily used for stability while swimming.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic appendage morphogenesis","termid":"GO:0035113"},{"relation_name":"is_a","term_name":"medial fin morphogenesis","termid":"GO:0035141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic medial fin morphogenesis","synonyms":[{"name":"embryonic unpaired fin morphogenesis","type":"exact"}],"termid":"GO:0035122"}


id: PBO:0081570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF496 divergent transcript","termid":"PBO:0081570"}


id: PBO:0067339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 432, pseudogene","termid":"PBO:0067339"}


id: GO:0120527
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenylyl sulfate + an aliphatic (Z)-desulfo-glucosinolate = a (Z)-omega-(methylsulfanyl)-N-sulfo-alkylhydroximate S-glucoside + adenosine 3',5'-bisphosphate + H+.","definition_xrefs":["RHEA:52724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016782","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"aliphatic desulfoglucosinolate sulfotransferase activity","secondary_identifiers":["EC:2.8.2.38","MetaCyc:RXN-18179"],"termid":"GO:0120527"}


id: GO:0018296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-FAD linkage via O4'-(8-alpha-FAD)-L-tyrosine.","definition_xrefs":["RESID:AA0145"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-FAD linkage via O4'-(8alpha-FAD)-L-tyrosine (obsolete GO:0018296)","termid":"GO:0018296"}


id: PBO:0076033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STK32A antisense RNA 1","termid":"PBO:0076033"}


id: PBO:0042286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD2 molecule","termid":"PBO:0042286"}


id: PBO:0083880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ferric reductase; reduces a specific subset of siderophore-bound iron prior to uptake by transporters; expression induced by low iron levels","termid":"PBO:0083880"}


id: PR:P78854
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- plb1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophospholipase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1A6.04c","synonyms":[{"name":"Spom972h-plb1","type":"exact"},{"name":"phospholipase B 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78854"}


id: FYPO:0007700
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a vegetative cell is inviable and an abnormally low volume, and in which the G2/M transition of the mitotic cell cycle begins earlier than normal.","definition_xrefs":["PomBase:mah","PMID:33683349","PMID:1706223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable small vegetative cell","termid":"FYPO:0000951"},{"relation_name":"is_a","term_name":"premature mitotic G2/M phase transition","termid":"FYPO:0002516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0000002","FYPO:0005447","FYPO:0000005","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"inviable small vegetative cell with premature mitotic G2/M phase transition","synonyms":[{"name":"inviable small cell with premature mitotic G2/M phase transition during vegetative growth","type":"exact"},{"name":"inviable small vegetative cell with advanced mitotic G2 phase progression","type":"related"},{"name":"inviable small vegetative cell with advanced mitotic G2/M phase transition","type":"exact"},{"name":"inviable small vegetative cell with advanced mitotic G2/M transition","type":"exact"},{"name":"inviable small vegetative cell with mitotic G2 advance","type":"exact"},{"name":"inviable small vegetative cell with mitotic G2/M transition advance","type":"exact"},{"name":"inviable small vegetative cell with mitotic cell cycle advance at G2/M transition","type":"exact"},{"name":"inviable small vegetative cell with premature cell cycle progression through mitotic G2/M phase transition","type":"exact"},{"name":"inviable small vegetative cell with premature mitotic G2/M phase transition during mitotic cell cycle","type":"related"},{"name":"inviable small vegetative cell with premature mitotic G2/M transition","type":"exact"},{"name":"mitotic catastrophe","type":"related"}],"termid":"FYPO:0007700"}


id: PBO:0074070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 45","termid":"PBO:0074070"}


id: GO:0086042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of one cardiomyocyte to another cardiomyocyte via adhesion molecules.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homotypic cell-cell adhesion","termid":"GO:0034109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cardiac muscle cell-cardiac muscle cell adhesion","synonyms":[{"name":"cardiomyocyte-cardiomyocyte adhesion","type":"exact"}],"termid":"GO:0086042"}


id: GO:0110147
data:
  {"annotated_genes":["SJAG_05338","SJAG_04896","SJAG_04679"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91470,92887,115171],"is_not":false,"summary":null,"term":"GO:0110147"}]},"cv_name":"biological_process","definition":"A process that contributes to the delivery of nickel ions to a target protein to facilitate its maturation.","definition_xrefs":["GOC:al","PMID:24115911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04679":null,"SJAG_04896":null,"SJAG_05338":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"protein maturation by nickel ion transfer","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110147","terms_by_termid":{"GO:0110147":null}}


id: GO:0004111
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + creatine = N-phosphocreatine + ADP + 2 H+.","definition_xrefs":["EC:2.7.3.2","RHEA:17157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, nitrogenous group as acceptor","termid":"GO:0016775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"creatine kinase activity","secondary_identifiers":["KEGG_REACTION:R01881","Reactome:R-HSA-200326","MetaCyc:CREATINE-KINASE-RXN","Reactome:R-HSA-200318"],"synonyms":[{"name":"ATP:creatine N-phosphotransferase activity","type":"related"},{"name":"ATP:creatine phosphotransferase activity","type":"related"},{"name":"BB-CK","type":"related"},{"name":"CK","type":"related"},{"name":"CK-BB","type":"related"},{"name":"CK-MB","type":"related"},{"name":"CK-MM","type":"related"},{"name":"CKMiMi","type":"related"},{"name":"MB-CK","type":"related"},{"name":"MM-CK","type":"related"},{"name":"Mi-CK","type":"related"},{"name":"MiMi-CK","type":"related"},{"name":"adenosine triphosphate-creatine transphosphorylase activity","type":"related"},{"name":"creatine phosphokinase activity","type":"related"},{"name":"creatine phosphotransferase activity","type":"related"},{"name":"phosphocreatine kinase activity","type":"related"}],"termid":"GO:0004111"}


id: PR:G2TRT5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC663.18 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRT5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCOCO-like protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.18","synonyms":[{"name":"Spom972h-SPCC663.18","type":"exact"}],"termid":"PR:G2TRT5"}


id: FYPO:0007012
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 28S ribosomal RNA measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal rRNA or precursor level","termid":"FYPO:0006000"},{"relation_name":"is_a","term_name":"normal mature ncRNA level","termid":"FYPO:0006469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal mature 28S rRNA level","synonyms":[{"name":"normal 28S rRNA level","type":"broad"},{"name":"normal mature 28S rRNA accumulation","type":"related"},{"name":"normal mature 28S rRNA level during mitotic cell cycle","type":"related"},{"name":"normal mature 28S rRNA level during vegetative growth","type":"exact"},{"name":"normal mature 28S rRNA transcript level","type":"exact"}],"termid":"FYPO:0007012"}


id: GO:0008229
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binds to microorganisms or other particulate material (for example, foreign erythrocytes) to increase the susceptibility of the latter to phagocytosis.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete opsonin activity (obsolete GO:0008229)","synonyms":[{"name":"opsonin activity","type":"exact"}],"termid":"GO:0008229"}


id: PBO:0031770
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_fermentation","termid":"PBO:0031770"}


id: PATO:0001305
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A temperature which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"temperature","termid":"PATO:0000146"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased temperature","secondary_identifiers":["PATO:0000678"],"synonyms":[{"name":"high temperature","type":"exact"},{"name":"hot","type":"exact"}],"termid":"PATO:0001305"}


id: GO:0010254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the floral nectaries over time, from its formation to the mature structure.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"flower development","termid":"GO:0009908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nectary development","termid":"GO:0010254"}


id: FYPO:0003619
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mRNA splicing via the spliceosome is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA splicing","termid":"FYPO:0003468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal mRNA splicing, via spliceosome","synonyms":[{"name":"normal mRNA splicing, via spliceosome during mitotic cell cycle","type":"related"},{"name":"normal mRNA splicing, via spliceosome during vegetative growth","type":"exact"},{"name":"normal nuclear mRNA splicing, via spliceosome","type":"exact"}],"termid":"FYPO:0003619"}


id: GO:0032428
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-galactosamine residues in N-acetyl-beta-D-galactosaminides.","definition_xrefs":["EC:3.2.1.53"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-N-acetylhexosaminidase activity","termid":"GO:0004563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"beta-N-acetylgalactosaminidase activity","secondary_identifiers":["MetaCyc:3.2.1.53-RXN"],"termid":"GO:0032428"}


id: PBO:0079470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twinfilin 1 pseudogene 2","termid":"PBO:0079470"}


id: GO:0019511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydroxylation of peptidyl-proline to form peptidyl-hydroxyproline.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein hydroxylation","termid":"GO:0018126"},{"relation_name":"is_a","term_name":"peptidyl-proline modification","termid":"GO:0018208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-proline hydroxylation","secondary_identifiers":["GO:0006472"],"termid":"GO:0019511"}


id: PBO:0043100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate sulfotransferase 12","termid":"PBO:0043100"}


id: GO:2001033
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98461],"is_not":false,"summary":null,"term":"GO:2001033"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of double-strand break repair via nonhomologous end joining.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of double-strand break repair","termid":"GO:2000780"},{"relation_name":"is_a","term_name":"regulation of double-strand break repair via nonhomologous end joining","termid":"GO:2001032"},{"relation_name":"negatively_regulates","term_name":"double-strand break repair via nonhomologous end joining","termid":"GO:0006303"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"negative regulation of double-strand break repair via nonhomologous end joining","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of NHEJ","type":"exact"}],"termid":"GO:2001033","terms_by_termid":{"GO:2001033":null}}


id: GO:0010640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the platelet-derived growth factor receptor signaling pathway.","definition_xrefs":["GOC:dph","GOC:hjd","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"platelet-derived growth factor receptor signaling pathway","termid":"GO:0048008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of platelet-derived growth factor receptor signaling pathway","synonyms":[{"name":"regulation of platelet-derived growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0010640"}


id: GO:0050815
data:
  {"annotated_genes":["SJAG_04933","SJAG_03118"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76870,71415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990269"}]},"cv_name":"molecular_function","definition":"Binding to a phosphorylated serine residue within a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylated amino acid binding","termid":"GO:0045309"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03118":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"phosphoserine residue binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"phosphoserine binding","type":"related"}],"termid":"GO:0050815","terms_by_termid":{"GO:1990269":null}}


id: PBO:0083520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF MST27","termid":"PBO:0083520"}


id: PBO:0088873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg24c","termid":"PBO:0088873"}


id: GO:0099009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The circularization of a viral genome following infection of a host cell. This is common amongst bacterial viruses to protect the viral genome ends from nucleases, to convert the linear genome to an integrative precursor or to give rise to the replicative form of the genome. It can be mediated by covalent closure of the DNA sticky ends, recombinaison between redundant terminal sequences or via the binding of a protein at the viral DNA extremities.","definition_xrefs":["VZ:3968","PMID:11894948","PMID:19523475","PMID:15489417","PMID:319596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral genome circularization","termid":"GO:0099009"}


id: PATO:0000777
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000777 long term memory value (obsolete PATO:0000777)","termid":"PATO:0000777"}


id: GO:1904971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of viral translation.","definition_xrefs":["GOC:bhm","GOC:TermGenie","PMID:19666601","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral process","termid":"GO:0050792"},{"relation_name":"regulates","term_name":"viral translation","termid":"GO:0019081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of viral translation","synonyms":[{"name":"regulation of viral protein anabolism","type":"exact"},{"name":"regulation of viral protein biosynthesis","type":"exact"},{"name":"regulation of viral protein biosynthetic process","type":"exact"},{"name":"regulation of viral protein formation","type":"exact"},{"name":"regulation of viral protein synthesis","type":"exact"}],"termid":"GO:1904971"}


id: SO:0000157
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A plasmid which carries within its sequence a bacteriophage replication origin. When the host bacterium is infected with \\\"helper\\\" phage, a phagemid is replicated along with the phage DNA and packaged into phage capsids.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vector_replicon","termid":"SO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phagemid","secondary_identifiers":["http://en.wikipedia.org/wiki/Phagemid"],"synonyms":[{"name":"phagemid vector","type":"related"}],"termid":"SO:0000157"}


id: GO:0017179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving peptidyl-diphthine, a modified histidine residue.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-diphthine metabolic process (obsolete GO:0017179)","synonyms":[{"name":"peptidyl-diphthine metabolism","type":"exact"}],"termid":"GO:0017179"}


id: PATO:0001582
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in an inactive muscle or muscle fibers by virtue of the bearer's exhibiting gradual lengthening.","definition_xrefs":["WordNet:WordNet"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001582 relaxational quality (obsolete PATO:0001582)","termid":"PATO:0001582"}


id: GO:0033186
data:
  {"annotated_genes":["SJAG_02439","SJAG_04272","SJAG_02198"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90859,91109,103857],"is_not":false,"summary":null,"term":"GO:0033186"}]},"cv_name":"cellular_component","definition":"A conserved heterotrimeric protein complex that promotes histone H3 and H4 deposition onto newly synthesized DNA during replication or DNA repair; specifically facilitates replication-dependent nucleosome assembly with the major histone H3 (H3.1). In many species the CAF-1 subunits are designated p150, p60, and p48.","definition_xrefs":["PMID:17083276","PMID:17065558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02198":null,"SJAG_02439":null,"SJAG_04272":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"CAF-1 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"chromatin assembly factor 1 complex","type":"exact"}],"termid":"GO:0033186","terms_by_termid":{"GO:0033186":null}}


id: MOD:01239
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct of an L-histidine residue with 4-hydroxynonenal.","definition_xrefs":["PubMed:10717661","PubMed:11327326","PubMed:15133838","Unimod:53#H"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-hydroxynonenal adduct","termid":"MOD:00446"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine 4-hydroxynonenal adduct","synonyms":[{"name":"4-hydroxynonenal (HNE)","type":"related"},{"name":"HNE","type":"related"}],"termid":"MOD:01239"}


id: PBO:0067091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 127, pseudogene","termid":"PBO:0067091"}


id: PBO:0017932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation machinery associated protein Mep33","termid":"PBO:0017932"}


id: GO:1990956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a fibroblast guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).","definition_xrefs":["GOC:dph","PMID:8760137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fibroblast chemotaxis","termid":"GO:1990956"}


id: PBO:0085788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function","termid":"PBO:0085788"}


id: SO:0000326
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A short diagnostic sequence tag, serial analysis of gene expression (SAGE), that allows the quantitative and simultaneous analysis of a large number of transcripts.","direct_ancestors":[{"relation_name":"is_a","term_name":"tag","termid":"SO:0000324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGE_tag","synonyms":[{"name":"SAGE tag","type":"exact"}],"termid":"SO:0000326"}


id: PBO:0016524
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Complexed With cdc Five","termid":"PBO:0016524"}


id: FYPO:0001119
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which the cell tapers at one end to a diameter smaller than the other in the vegetative growth phase of the life cycle. The cell diameter at the narrow end is smaller than that of a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tapered cell","termid":"FYPO:0000014"},{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"tapered vegetative cell","synonyms":[{"name":"bottle-shaped vegetative cell","type":"exact"},{"name":"bottle-shaped vegetative cell during mitotic cell cycle","type":"related"},{"name":"cell morphology, bottle/skittle during vegetative growth","type":"exact"},{"name":"skittle-shaped cell during vegetative growth","type":"exact"},{"name":"tapered cell during vegetative growth","type":"exact"}],"termid":"FYPO:0001119"}


id: PBO:0082621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of a heterodimeric Poc4p-Irc25p chaperone; involved in assembly of alpha subunits into the 20S proteasome; may regulate formation of proteasome isoforms with alternative subunits under different conditions; upregulates proteasome assembly in response to the unfolded protein response activated by mistargeting of proteins (UPRam)","termid":"PBO:0082621"}


id: SO:0001532
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region recognized by a recombinase.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specific_recombination_site","termid":"SO:0000299"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination_signal_sequence","secondary_identifiers":["http://en.wikipedia.org/wiki/Recombination_Signal_Sequences"],"synonyms":[{"name":"recombination signal sequence","type":"related"}],"termid":"SO:0001532"}


id: PBO:0083514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF IST1/YNL265C","termid":"PBO:0083514"}


id: PBO:0084157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High affinity sulfate permease of the SulP anion transporter family; sulfate uptake is mediated by specific sulfate transporters Sul1p and Sul2p, which control the concentration of endogenous activated sulfate intermediates","termid":"PBO:0084157"}


id: PBO:0067242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 314, pseudogene","termid":"PBO:0067242"}


id: GO:0046172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of octanol, the 8-carbon alcohol with the formula C8H17OH.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"octanol metabolic process","termid":"GO:0006070"},{"relation_name":"is_a","term_name":"primary alcohol catabolic process","termid":"GO:0034310"},{"relation_name":"is_a","term_name":"fatty alcohol catabolic process","termid":"GO:1903174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"octanol catabolic process","synonyms":[{"name":"octanol breakdown","type":"exact"},{"name":"octanol catabolism","type":"exact"},{"name":"octanol degradation","type":"exact"}],"termid":"GO:0046172"}


id: GO:0090506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process that results in the initiation of an axillary shoot meristem. An axillary shoot meristem is a shoot meristem formed in the axil of a leaf.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meristem initiation","termid":"GO:0010014"},{"relation_name":"part_of","term_name":"secondary shoot formation","termid":"GO:0010223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axillary shoot meristem initiation","synonyms":[{"name":"axillary bud meristem initiation","type":"related"}],"termid":"GO:0090506"}


id: FYPO:0005814
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plus ends of microtubules does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to microtubule during vegetative growth","termid":"FYPO:0003269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to microtubule plus-end","synonyms":[{"name":"abolished protein localisation to microtubule plus-end","type":"exact"},{"name":"abolished protein localization to microtubule plus end","type":"exact"},{"name":"abolished protein localization to microtubule plus-end during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to microtubule plus-end during vegetative growth","type":"exact"},{"name":"protein localization to microtubule plus-end abolished","type":"exact"}],"termid":"FYPO:0005814"}


id: PBO:0058468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5197","termid":"PBO:0058468"}


id: PBO:0046759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome component 1","termid":"PBO:0046759"}


id: PBO:0073796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 3","termid":"PBO:0073796"}


id: GO:0018311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of N4-hydroxymethyl-L-asparagine from other compounds, including peptidyl-asparagine.","definition_xrefs":["RESID:AA0236"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-N4-hydroxymethyl-L-asparagine biosynthetic process from peptidyl-asparagine (obsolete GO:0018311)","synonyms":[{"name":"peptidyl-N4-hydroxymethyl-L-asparagine anabolism from peptidyl-asparagine","type":"exact"},{"name":"peptidyl-N4-hydroxymethyl-L-asparagine formation from peptidyl-asparagine","type":"exact"},{"name":"peptidyl-N4-hydroxymethyl-L-asparagine synthesis from peptidyl-asparagine","type":"exact"}],"termid":"GO:0018311"}


id: FYPO:0001760
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell separation after cytokinesis is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal cell separation after cytokinesis","synonyms":[{"name":"normal cell separation after cytokinesis during mitotic cell cycle","type":"related"},{"name":"normal cell separation after cytokinesis during vegetative growth","type":"exact"},{"name":"normal cell separation after cytokinesis following mitosis","type":"exact"},{"name":"normal mitotic cytokinetic cell separation","type":"exact"},{"name":"normal septum digestion after cytokinesis","type":"exact"}],"termid":"FYPO:0001760"}


id: GO:0001109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the transition from the initiation to the elongation phases of transcription by a DNA-dependent RNA polymerase, generally including a conformational change from the initiation conformation to the elongation conformation. Promoter clearance often involves breaking contact with transcription factors involved only in the initiation phase and making contacts with elongation specific factors.","definition_xrefs":["PMID:15020047","PMID:18280161","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA biosynthetic process","termid":"GO:0032774"},{"relation_name":"part_of","term_name":"DNA-templated transcription","termid":"GO:0006351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"promoter clearance during DNA-templated transcription","secondary_identifiers":["GO:0001122"],"synonyms":[{"name":"promoter clearance during DNA-dependent transcription","type":"exact"},{"name":"promoter clearance from bacterial-type RNA polymerase promoter","type":"narrow"},{"name":"promoter escape","type":"broad"}],"termid":"GO:0001109"}


id: PBO:0060849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nei like DNA glycosylase 3","termid":"PBO:0060849"}


id: PBO:0070218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 151 pseudogene","termid":"PBO:0070218"}


id: PBO:0043440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 2","termid":"PBO:0043440"}


id: GO:0031869
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a prostacyclin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostanoid receptor binding","termid":"GO:0031862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"prostacyclin receptor binding","synonyms":[{"name":"prostacyclin receptor ligand","type":"narrow"},{"name":"prostanoid IP receptor binding","type":"exact"}],"termid":"GO:0031869"}


id: GO:0061152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the trachea submucosa over time from its formation to the mature structure. The trachea submucosa is made up of the glands and elastic tissue that lie under the mucosa in the trachea.","definition_xrefs":["GOC:yaf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"trachea development","termid":"GO:0060438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trachea submucosa development","termid":"GO:0061152"}


id: GO:0003078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate, or extent of natriuresis, the process of renal sodium excretion.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of natriuresis (obsolete GO:0003078)","synonyms":[{"name":"regulation of natriuresis","type":"exact"}],"termid":"GO:0003078"}


id: PBO:0087381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sterol-binding protein that localizes to puncta in the cortical ER; sterol binding occurs via two StART-like domains; one of six StART-like domain-containing proteins in yeast that may be involved in intracellular sterol transfer between membranes; conserved across eukaryotes; has both GRAM and StART-like (VASt) domains; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0087381"}


id: GO:0004448
data:
  {"annotated_genes":["SJAG_04362"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004450"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: isocitrate + NAD(P)+ = 2-oxoglutarate + CO2 + NAD(P)H.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04362":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"isocitrate dehydrogenase [NAD(P)+] activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"IDH activity","type":"related"},{"name":"IDP activity","type":"related"},{"name":"isocitrate dehydrogenase activity","type":"exact"},{"name":"isocitric acid dehydrogenase activity","type":"exact"},{"name":"isocitric dehydrogenase activity","type":"exact"},{"name":"oxalosuccinate carboxylase activity","type":"exact"},{"name":"oxalosuccinate decarboxylase activity","type":"exact"},{"name":"oxalosuccinic decarboxylase activity","type":"exact"}],"termid":"GO:0004448","terms_by_termid":{"GO:0004450":null}}


id: GO:1903070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of ER-associated ubiquitin-dependent protein catabolic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:rph","PMID:17872946"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of ER-associated ubiquitin-dependent protein catabolic process (obsolete GO:1903070)","termid":"GO:1903070"}


id: GO:0052036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal execution of  inflammatory response in the host organism; the inflammatory response is the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host defenses","termid":"GO:0044414"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host inflammatory response","termid":"GO:0052032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host inflammatory response","secondary_identifiers":["GO:0052260"],"synonyms":[{"name":"suppression by symbiont of host inflammatory response","type":"exact"},{"name":"down regulation by symbiont of host inflammatory response","type":"exact"},{"name":"down-regulation by symbiont of host inflammatory response","type":"exact"},{"name":"downregulation by symbiont of host inflammatory response","type":"exact"},{"name":"inhibition by symbiont of host inflammatory response","type":"narrow"},{"name":"negative regulation by organism of inflammatory response of other organism involved in symbiotic interaction","type":"broad"},{"name":"negative regulation by symbiont of host inflammatory response","type":"exact"}],"termid":"GO:0052036"}


id: PBO:0086535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; partially overlaps dubious ORF YLR123C","termid":"PBO:0086535"}


id: GO:0106125
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A matrix composed of planar membranes, vesicles and lipid inclusions within the reservosome.","definition_xrefs":["PMID:12204365","PMID:21818313","PMID:22425988","GOC:ach","PMID:19288526","PMID:15521631","PMID:18452191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"reservosome","termid":"GO:0106123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005773"],"is_obsolete":false,"name":"reservosome matrix","termid":"GO:0106125"}


id: GO:0008462
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of proteins to small peptides in the presence of ATP and magnesium. Alpha-casein is the usual test substrate. In the absence of ATP, only oligopeptides shorter than five residues are cleaved, for example, succinyl-Leu-Tyr-NHMec which is cleaved at the Tyr-NHMec bond, and Leu-Tyr-Leu-Tyr-Trp which is cleaved at the second Leu-Typ bond (cleavage of the Tyr-Leu and Tyr-Trp bonds also occurs).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete endopeptidase Clp activity (obsolete GO:0008462)","synonyms":[{"name":"ATP-dependent Clp protease","type":"narrow"},{"name":"Clp protease","type":"narrow"},{"name":"ClpP","type":"related"},{"name":"caseinolytic protease activity","type":"related"},{"name":"endopeptidase Clp activity","type":"exact"},{"name":"endopeptidase Ti activity","type":"related"},{"name":"protease Ti activity","type":"related"}],"termid":"GO:0008462"}


id: GO:0007409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"De novo generation of a long process of a neuron, including the terminal branched region. Refers to the morphogenesis or creation of shape or form of the developing axon, which carries efferent (outgoing) action potentials from the cell body towards target cells.","definition_xrefs":["GOC:jid","ISBN:0198506732","GOC:dph","GOC:pg","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection morphogenesis","termid":"GO:0048812"},{"relation_name":"part_of","term_name":"cell morphogenesis involved in neuron differentiation","termid":"GO:0048667"},{"relation_name":"part_of","term_name":"axon development","termid":"GO:0061564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axonogenesis","secondary_identifiers":["GO:0007410"],"synonyms":[{"name":"axon growth","type":"narrow"},{"name":"axon morphogenesis","type":"exact"},{"name":"neuron long process generation","type":"exact"}],"termid":"GO:0007409"}


id: PBO:0044702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 3 Y-linked","termid":"PBO:0044702"}


id: PR:O59700
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mfs3 gene.","definition_xrefs":["UniProtKB:O59700","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C36.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36.03c","synonyms":[{"name":"Spom972h-mfs3","type":"exact"}],"termid":"PR:O59700"}


id: PBO:0091612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"esterase/lipase, implicated in cellular detoxification","termid":"PBO:0091612"}


id: PBO:0077947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 7-1","termid":"PBO:0077947"}


id: PBO:0028364
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiseptate_cell","termid":"PBO:0028364"}


id: PBO:0041461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 10 open reading frame 90","termid":"PBO:0041461"}


id: GO:0001228
data:
  {"annotated_genes":["SJAG_04092","SJAG_02406","SJAG_01916","SJAG_03183","SJAG_02810","SJAG_03241","SJAG_01307","SJAG_00987","SJAG_03519","SJAG_04249","SJAG_01694","SJAG_00266","SJAG_02252","SJAG_04855","SJAG_02730","SJAG_04009","SJAG_01062","SJAG_00802","SJAG_04839","SJAG_01243","SJAG_04712","SJAG_03538","SJAG_04036","SJAG_04749","SJAG_03346","SJAG_00698","SJAG_03484","SJAG_02311","SJAG_02472","SJAG_02218","SJAG_04813","SJAG_05288","SJAG_00163","SJAG_05247","SJAG_05153","SJAG_00210","SJAG_00693","SJAG_01583","SJAG_04388","SJAG_03735","SJAG_03879","SJAG_03143"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83633,83996,84066,84493,84826,85073,85497,86126,87937,88780,89331,89755,90782,91748,92347,93367,94185,94500,95583,95889,96581,98376,100561,100894,101958,102226,103179,103709,104106,104938,105184,105320,105321,105829,106868,108035,108074,108075,109842,110245,110738,112246,112647,113666,114241],"is_not":false,"summary":null,"term":"GO:0001228"}]},"cv_name":"molecular_function","definition":"A DNA-binding transcription factor activity that activates or increases transcription of specific gene sets transcribed by RNA polymerase II.","definition_xrefs":["GOC:txnOH-2018","PMID:27145859","PMID:20737563","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription factor activity, RNA polymerase II-specific","termid":"GO:0000981"},{"relation_name":"is_a","term_name":"DNA-binding transcription activator activity","termid":"GO:0001216"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00163":null,"SJAG_00210":null,"SJAG_00266":null,"SJAG_00693":null,"SJAG_00698":null,"SJAG_00802":null,"SJAG_00987":null,"SJAG_01062":null,"SJAG_01243":null,"SJAG_01307":null,"SJAG_01583":null,"SJAG_01694":null,"SJAG_01916":null,"SJAG_02218":null,"SJAG_02252":null,"SJAG_02311":null,"SJAG_02406":null,"SJAG_02472":null,"SJAG_02730":null,"SJAG_02810":null,"SJAG_03143":null,"SJAG_03183":null,"SJAG_03241":null,"SJAG_03346":null,"SJAG_03484":null,"SJAG_03519":null,"SJAG_03538":null,"SJAG_03735":null,"SJAG_03879":null,"SJAG_04009":null,"SJAG_04036":null,"SJAG_04092":null,"SJAG_04249":null,"SJAG_04388":null,"SJAG_04712":null,"SJAG_04749":null,"SJAG_04813":null,"SJAG_04839":null,"SJAG_04855":null,"SJAG_05153":null,"SJAG_05247":null,"SJAG_05288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003700"},{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0001216"}],"interesting_parent_ids":["GO:0003700","GO:0140110","GO:0001216","GO:0003674"],"is_obsolete":false,"name":"DNA-binding transcription activator activity, RNA polymerase II-specific","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0001205","GO:0001211","GO:0001212","GO:0001213","GO:0001209","GO:0001077"],"synonyms":[{"name":"RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription","type":"narrow"},{"name":"RNA polymerase II distal enhancer sequence-specific DNA-binding transcription factor activity involved in positive regulation of transcription","type":"narrow"},{"name":"RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription","type":"exact"},{"name":"RNA polymerase II transcriptional activator activity, copper ion regulated proximal promoter sequence-specific DNA binding","type":"narrow"},{"name":"RNA polymerase II transcriptional activator activity, metal ion regulated core promoter proximal region sequence-specific binding","type":"narrow"},{"name":"RNA polymerase II transcriptional activator activity, metal ion regulated proximal promoter sequence-specific DNA binding","type":"narrow"},{"name":"RNA polymerase II transcriptional activator activity, zinc ion regulated core promoter proximal region sequence-specific binding","type":"narrow"},{"name":"RNA polymerase II transcriptional activator activity, zinc ion regulated proximal promoter sequence-specific DNA binding","type":"narrow"},{"name":"copper ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in positive regulation of transcription","type":"narrow"},{"name":"distal enhancer DNA-binding transcription activator activity, RNA polymerase II-specific","type":"narrow"},{"name":"metal ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in positive regulation of transcription","type":"narrow"},{"name":"metal ion regulated sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription","type":"narrow"},{"name":"proximal promoter DNA-binding transcription activator activity, RNA polymerase II-specific","type":"narrow"},{"name":"sequence-specific distal enhancer binding RNA polymerase II transcription factor activity involved in positive regulation of transcription","type":"narrow"},{"name":"transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding","type":"narrow"},{"name":"transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific DNA binding","type":"narrow"},{"name":"transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding","type":"narrow"},{"name":"transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding","type":"exact"},{"name":"transcriptional activator activity, metal ion regulated sequence-specific DNA binding","type":"narrow"},{"name":"zinc ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in positive regulation of transcription","type":"narrow"}],"termid":"GO:0001228","terms_by_termid":{"GO:0001228":null}}


id: PBO:0048271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 8","termid":"PBO:0048271"}


id: GO:1905196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of ATPase activity, uncoupled.","definition_xrefs":["GO_REF:0000059","PMID:26545917","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of ATPase activity, uncoupled (obsolete GO:1905196)","synonyms":[{"name":"activation of ATPase activity, uncoupled","type":"narrow"},{"name":"activation of adenylpyrophosphatase activity","type":"related"},{"name":"positive regulation of adenylpyrophosphatase activity","type":"related"},{"name":"up regulation of ATPase activity, uncoupled","type":"exact"},{"name":"up regulation of adenylpyrophosphatase activity","type":"related"},{"name":"up-regulation of ATPase activity, uncoupled","type":"exact"},{"name":"up-regulation of adenylpyrophosphatase activity","type":"related"},{"name":"upregulation of ATPase activity, uncoupled","type":"exact"},{"name":"upregulation of adenylpyrophosphatase activity","type":"related"}],"termid":"GO:1905196"}


id: PBO:0090382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRC complex (ER membrane insertion) subunit Get4","termid":"PBO:0090382"}


id: GO:0098721
data:
  {"annotated_genes":["SJAG_03970","SJAG_04714"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84481,91590],"is_not":false,"summary":null,"term":"GO:0098721"},{"annotations":[84124],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905530"}]},"cv_name":"biological_process","definition":"The directed movement of uracil from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"uracil transmembrane transport","termid":"GO:1903791"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03970":null,"SJAG_04714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"uracil import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1902431"],"synonyms":[{"name":"uracil import into cell","type":"exact"}],"termid":"GO:0098721","terms_by_termid":{"GO:0098721":null,"GO:1905530":null}}


id: GO:0102616
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: oryzalexin D + NAD(P) = oryzalexin A + H+ + NAD(P)H.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete oryzalexin A synthase activity (obsolete GO:0102616)","termid":"GO:0102616"}


id: GO:1901127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of candicidin.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"candicidin metabolic process","termid":"GO:1901125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"candicidin biosynthetic process","synonyms":[{"name":"candicidin anabolism","type":"exact"},{"name":"candicidin biosynthesis","type":"exact"},{"name":"candicidin formation","type":"exact"},{"name":"candicidin synthesis","type":"exact"}],"termid":"GO:1901127"}


id: GO:1900854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of terrequinone A biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di","PMID:24066102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"positively_regulates","term_name":"terrequinone A biosynthetic process","termid":"GO:1900796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of terrequinone A biosynthetic process","secondary_identifiers":["GO:1900852"],"synonyms":[{"name":"regulation of terrequinone A biosynthetic process","type":"broad"},{"name":"up regulation of terrequinone A biosynthetic process","type":"exact"},{"name":"up-regulation of terrequinone A biosynthetic process","type":"exact"},{"name":"upregulation of terrequinone A biosynthetic process","type":"exact"}],"termid":"GO:1900854"}


id: GO:0050830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions triggered in response to the presence of a Gram-positive bacterium that act to protect the cell or organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response to bacterium","termid":"GO:0042742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to Gram-positive bacterium","synonyms":[{"name":"Gram-positive antibacterial peptide activity","type":"related"},{"name":"defence response to Gram-positive bacteria","type":"exact"},{"name":"defence response to Gram-positive bacterium","type":"exact"},{"name":"defense response to Gram-positive bacteria","type":"exact"}],"termid":"GO:0050830"}


id: PATO:0002150
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved outwards from the part of the body from which the tail arises.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splayed","termid":"PATO:0001785"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splayed caudal","synonyms":[{"name":"splayed inferior (human torso)","type":"exact"},{"name":"splayed posterior","type":"exact"}],"termid":"PATO:0002150"}


id: GO:0008964
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphate + oxaloacetate = phosphoenolpyruvate + HCO3-.","definition_xrefs":["EC:4.1.1.31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoenolpyruvate carboxykinase activity","termid":"GO:0004611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"phosphoenolpyruvate carboxylase activity","secondary_identifiers":["MetaCyc:PEPCARBOX-RXN","RHEA:28370","KEGG_REACTION:R00345"],"synonyms":[{"name":"PEP carboxylase activity","type":"related"},{"name":"PEPC","type":"related"},{"name":"PEPCase activity","type":"related"},{"name":"phosphate:oxaloacetate carboxy-lyase (adding phosphate; phosphoenolpyruvate-forming)","type":"related"},{"name":"phosphate:oxaloacetate carboxy-lyase (phosphorylating)","type":"related"},{"name":"phosphoenolpyruvic carboxylase activity","type":"related"},{"name":"phosphopyruvate (phosphate) carboxylase activity","type":"related"}],"termid":"GO:0008964"}


id: PBO:0089505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA adenine glycosylase Myh1","termid":"PBO:0089505"}


id: GO:0019221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a cytokine to a receptor on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:19295629","GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"part_of","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cytokine-mediated signaling pathway","synonyms":[{"name":"cytokine and chemokine mediated signaling pathway","type":"exact"},{"name":"cytokine mediated signalling pathway","type":"exact"}],"termid":"GO:0019221"}


id: GO:0003735
data:
  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id: PBO:0000842
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  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.4.2","termid":"PBO:0000842"}


id: GO:0030595
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a leukocyte in response to an external stimulus.","definition_xrefs":["GOC:add","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte migration","termid":"GO:0050900"},{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte chemotaxis","synonyms":[{"name":"immune cell chemotaxis","type":"exact"},{"name":"leucocyte chemotaxis","type":"exact"}],"termid":"GO:0030595"}


id: PBO:0039059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiogenic factor with G-patch and FHA domains 1 pseudogene 8","termid":"PBO:0039059"}


id: PBO:0070305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 11","termid":"PBO:0070305"}


id: SO:00000030002382
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 5' UTR variant where a premature stop codon is gained in an upstream open reading frame.","definition_xrefs":["PMID:32461616","PMID:32926138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5_prime_UTR_uORF_stop_codon_variant","termid":"SO:00000010002382"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_prime_UTR_uORF_stop_codon_gain_variant","synonyms":[{"name":"uSTOP_gained","type":"exact"}],"termid":"SO:00000030002382"}


id: PBO:0076867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 14, intercellular bridge forming factor","termid":"PBO:0076867"}


id: PBO:0079875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF3A pseudogene 2","termid":"PBO:0079875"}


id: PBO:0048459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucagon","termid":"PBO:0048459"}


id: GO:1900941
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of (Z)-nonadeca-1,14-diene biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of olefin biosynthetic process","termid":"GO:1900911"},{"relation_name":"is_a","term_name":"regulation of (Z)-nonadeca-1,14-diene metabolic process","termid":"GO:1900938"},{"relation_name":"regulates","term_name":"(Z)-nonadeca-1,14-diene biosynthetic process","termid":"GO:1900879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of (Z)-nonadeca-1,14-diene biosynthetic process","synonyms":[{"name":"regulation of (Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"regulation of (Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"regulation of (Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"regulation of (Z)-nonadeca-1,14-diene synthesis","type":"exact"}],"termid":"GO:1900941"}


id: PBO:0076877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEX28 pseudogene 1","termid":"PBO:0076877"}


id: PomGeneEx:0000002
data:
  {"annotated_genes":["SJAG_00118","SJAG_01143"],"annotation_feature_type":"gene","cv_annotations":{"qualitative_gene_expression":[{"annotations":[115593,115574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"PomGeneEx:0000011"}]},"cv_name":"PomGeneEx","definition":"A gene expression qualifier that indicates that an RNA or protein is present at a higher level or produced at a faster rate under one set of conditions or at one indicated time than otherwise.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression qualifier","termid":"PomGeneEx:0000001"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_01143":null},"genotype_count":0,"is_obsolete":false,"name":"increased","references_by_uniquename":{"PMID:25866389":null},"synonyms":[{"name":"gene expression increased","type":"exact"},{"name":"gene product level increased","type":"exact"}],"termid":"PomGeneEx:0000002","terms_by_termid":{"GO:0000087":null,"PomGeneEx:0000011":null}}


id: FYPO:0002529
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleoplasm is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during vegetative growth","termid":"FYPO:0001129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization to nucleoplasm","synonyms":[{"name":"abnormal protein localisation to nucleoplasm","type":"exact"},{"name":"abnormal protein localization to nucleoplasm during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to nucleoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0002529"}


id: PATO:0001428
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concentration quality inhering in a medium by virtue of the bearer's tendency to hydronate a specific reference base.","definition_xrefs":["chemicool:chemicool"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acidity","termid":"PATO:0001842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medium acidity","termid":"PATO:0001428"}


id: GO:1902488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a cholangiocyte.","definition_xrefs":["GOC:TermGenie","PMID:22961800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell apoptotic process","termid":"GO:1904019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cholangiocyte apoptotic process","synonyms":[{"name":"cholangiocyte apoptosis","type":"narrow"},{"name":"epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"epithelial cell of bile duct apoptotic process","type":"exact"}],"termid":"GO:1902488"}


id: PBO:0079305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 2B","termid":"PBO:0079305"}


id: PBO:0055153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2572","termid":"PBO:0055153"}


id: PBO:0034160
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_pro-orthology_relationship_with","termid":"PBO:0034160"}


id: PBO:0081693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 615","termid":"PBO:0081693"}


id: PBO:0035763
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_microtubule_nucleation_during_mitotic_interphase","termid":"PBO:0035763"}


id: PR:P15398
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase I subunit RPA1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I subunit rpa1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4C3.05c","secondary_identifiers":["UniProtKB:P15398"],"synonyms":[{"name":"DNA-directed RNA polymerase I 190 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DNA-directed RNA polymerase I largest subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR1A","type":"exact"}],"termid":"PR:P15398"}


id: PBO:0064447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"podocan","termid":"PBO:0064447"}


id: PBO:0004832
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.2.3","termid":"PBO:0004832"}


id: PBO:0059743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 17","termid":"PBO:0059743"}


id: PBO:0078691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon AAG) 2-4","termid":"PBO:0078691"}


id: PATO:0000013
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000013 relative age (obsolete PATO:0000013)","termid":"PATO:0000013"}


id: PBO:0040218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase family AAA domain containing 3C","termid":"PBO:0040218"}


id: PBO:0073759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 13","termid":"PBO:0073759"}


id: FYPO:0007671
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the coordination of transcription rates to scale linearly with cell size is normal (i.e. indistinguishable from wild type). Transcriptional scaling maintains biomolecule concentrations as cells grow and divide. Total RNA or a specific RNA may be measured.","definition_xrefs":["PMID:32059768","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal transcription scaling","synonyms":[{"name":"normal linear transcription scaling with cell size","type":"exact"},{"name":"normal transcription scaling during mitotic cell cycle","type":"related"},{"name":"normal transcription scaling during vegetative growth","type":"exact"},{"name":"normal transcription scaling with cell size","type":"exact"}],"termid":"FYPO:0007671"}


id: GO:0033477
data:
  {"annotated_genes":["SJAG_04425"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033528"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving S-methyl-methionine (SMM). SMM can be converted to methionine by donating a methyl group to homocysteine, and concurrent operation of this reaction and that mediated by MMT sets up the SMM cycle.","definition_xrefs":["PMID:12692340","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"S-methylmethionine metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"S-methylmethionine metabolism","type":"exact"}],"termid":"GO:0033477","terms_by_termid":{"GO:0033528":null}}


id: PBO:0004683
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae Spt4","termid":"PBO:0004683"}


id: PBO:0044433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily A member 27, pseudogene","termid":"PBO:0044433"}


id: GO:0019928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cross-linking of a cysteine residue to an aspartic acid residue to form 3-(S-L-cysteinyl)-L-aspartic acid.","definition_xrefs":["PMID:11555656","RESID:AA0314","PMID:11717396","PDB:1JJU"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 3-(S-L-cysteinyl)-L-aspartic acid (obsolete GO:0019928)","termid":"GO:0019928"}


id: PBO:0057654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1246","termid":"PBO:0057654"}


id: PBO:0047940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(13)(q32)","termid":"PBO:0047940"}


id: PBO:0054785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2198","termid":"PBO:0054785"}


id: PBO:0003636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh5 (predicted)","termid":"PBO:0003636"}


id: GO:1990808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an F-BAR domain of a protein, a domain of about 60 residues that occurs in a wide range of cytoskeletal proteins.","definition_xrefs":["PMID:20603077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"F-bar domain binding","termid":"GO:1990808"}


id: PBO:0057553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 668","termid":"PBO:0057553"}


id: FYPO:0001458
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0000788"},{"relation_name":"is_a","term_name":"decreased histone H3 acetylation during vegetative growth","termid":"FYPO:0002362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0002494","FYPO:0001320","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"decreased histone H3-K14 acetylation during vegetative growth","synonyms":[{"name":"decreased histone H3 K14 acetylation during vegetative growth","type":"exact"},{"name":"decreased histone H3-K14 acetylation during mitotic cell cycle","type":"related"},{"name":"decreased histone lysine H3 K14 acetylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K14 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0001458"}


id: PBO:0049325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIA subunit 2","termid":"PBO:0049325"}


id: _global:has_gene_product
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"x has gene product y if and only if x is a gene (SO:0000704) that participates in some gene expression process (GO:0010467) where the output of that process is either y or something that is ribosomally translated from y","direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_related_to","termid":"_global:genomically_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_gene_product","secondary_identifiers":["RO:0002205"],"termid":"_global:has_gene_product"}


id: SO:0000488
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one VDJ-gene and one J-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"VDJ_gene_segment","termid":"SO:0000574"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VDJ_J_cluster","synonyms":[{"name":"(VDJ)-J-CLUSTER","type":"exact"},{"name":"VDJ J cluster","type":"exact"}],"termid":"SO:0000488"}


id: GO:1901528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any hydrogen peroxide mediated signaling pathway that is involved in stomatal movement.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete hydrogen peroxide mediated signaling pathway involved in stomatal movement (obsolete GO:1901528)","synonyms":[{"name":"H2O2 mediated signaling pathway involved in stomatal movement","type":"exact"},{"name":"hydrogen peroxide mediated signalling pathway involved in stomatal movement","type":"exact"}],"termid":"GO:1901528"}


id: GO:0035477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of angioblast cell migration involved in selective angioblast sprouting.","definition_xrefs":["GOC:dgh","PMID:19815777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"is_a","term_name":"regulation of vasculature development","termid":"GO:1901342"},{"relation_name":"regulates","term_name":"angioblast cell migration involved in selective angioblast sprouting","termid":"GO:0035475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of angioblast cell migration involved in selective angioblast sprouting","termid":"GO:0035477"}


id: PBO:0076446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAFA chemokine like family member 2","termid":"PBO:0076446"}


id: PBO:0003738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMP dehydrogenase Gua1 (predicted)","termid":"PBO:0003738"}


id: GO:0016901
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces a quinone or a similar acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor","secondary_identifiers":["EC:1.1.5.-"],"termid":"GO:0016901"}


id: GO:0010679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of cinnamic acid, 3-phenyl-2-propenoic acid, which is then utilized in the metabolism of salicylic acid.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete cinnamic acid biosynthetic process involved in salicylic acid metabolism (obsolete GO:0010679)","termid":"GO:0010679"}


id: GO:0090032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroid hormones,compounds with a 1, 2, cyclopentanoperhydrophenanthrene nucleus that act as hormones.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid biosynthetic process","termid":"GO:0010894"},{"relation_name":"is_a","term_name":"negative regulation of hormone biosynthetic process","termid":"GO:0032353"},{"relation_name":"is_a","term_name":"regulation of steroid hormone biosynthetic process","termid":"GO:0090030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of steroid hormone biosynthetic process","termid":"GO:0090032"}


id: FYPO:0007151
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form actin cables that are longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cable morphology","termid":"FYPO:0002031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0004803"],"is_obsolete":false,"name":"long actin cables","synonyms":[{"name":"elongated actin cables","type":"exact"},{"name":"increased actin cable length","type":"exact"},{"name":"long actin cables during mitotic cell cycle","type":"related"},{"name":"long actin cables during vegetative growth","type":"exact"},{"name":"long formin-nucleated actin cables","type":"exact"}],"termid":"FYPO:0007151"}


id: PBO:0053399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 328-2, pseudogene","termid":"PBO:0053399"}


id: PATO:0001759
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in a bearer by virtue of the bearer's containing granules.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"granular","termid":"PATO:0001759"}


id: PATO:0000801
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000801 motor function value (obsolete PATO:0000801)","termid":"PATO:0000801"}


id: SO:0002098
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pseudogene derived from an immunoglobulin gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_pseudogene","termid":"SO:0002097"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin_pseudogene","synonyms":[{"name":"immunoglobulin pseudogene","type":"exact"}],"termid":"SO:0002098"}


id: PBO:0074644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 36A","termid":"PBO:0074644"}


id: PR:P31397
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- map3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P31397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pheromone M-factor receptor (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3F10.10c","synonyms":[{"name":"Spom972h-map3","type":"exact"}],"termid":"PR:P31397"}


id: GO:0008150
data:
  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